View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15715_high_6 (Length: 455)
Name: NF15715_high_6
Description: NF15715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15715_high_6 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 437
Target Start/End: Complemental strand, 30749262 - 30748841
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30749262 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgagtatcaaaggattaaacaatgttggcagtttatctgaagctgaagcgg |
30749163 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
30749162 |
ctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatgggtatacaaggaggaatctacggttagtgctgagcaagtacttgaagtgcttca |
30749063 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30749062 |
acctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcgttaccaagttggataattattcttagtaatttaatttctcttgaactt |
30748963 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
|| || |||||||||||||||||||| ||||||||||||||||||||||| || ||||||| | |||| ||||||||||||||||||||| |
|
|
| T |
30748962 |
gagatttgcaacaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaaaactaagattatatggtatgaataatctgaaatacttggatg |
30748863 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
30748862 |
atgatgaatctgagtatggtat |
30748841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 16 - 437
Target Start/End: Original strand, 30677652 - 30678073
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30677652 |
aaagggaatagcttgacagagttacgtgatctaaacctcagtggaaaactgagtatcaaaggattaaacaatgttgctagtttatctgaagctgaagcgg |
30677751 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
|||| ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| | |
|
|
| T |
30677752 |
ctaaattgatggataaaaaagaccttcatgaattatgcttgtcatggggatacaaggaggaatctacggttagtgctgagcaagtacttgaagtgcttaa |
30677851 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30677852 |
acctcactcaaatctcaaatgcttgacaataaattactatgaaagattatcgttaccaagttggataattattcttagtaatttaatttctcttgaactt |
30677951 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
| |||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
30677952 |
gaggaatgcaacaaaattgtgcggcttccgttacgtggtaaactaccatctctaaaaagactgagattatctcgtatgaataatctgaaatacttggatg |
30678051 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30678052 |
atgatgaatctgaggatggtat |
30678073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 437
Target Start/End: Complemental strand, 29871805 - 29871384
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29871805 |
aaagggaatagtttgacagagttacgtgatctaaaactcggtggaaaactgagtatcgaaggattaaacaatgttggcagtttatctgaagctgaagcgg |
29871706 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
29871705 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggatatcgcaacaggaatctataattagtgctgagcaagtactcgaagagcttca |
29871606 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
29871605 |
acctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcgttaccaagttggataattattcttagtaatttaatttctcttaaactt |
29871506 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
| | || ||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
29871505 |
gaggattgcaacaagattgtgcggcttccgttacttggtaaactaccatctctaaaaaaactggaattatcttatatggataatctgaaatacttggatg |
29871406 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
29871405 |
atgatgaatctcaggatggtat |
29871384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 437
Target Start/End: Complemental strand, 30435441 - 30435020
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435441 |
aaaggaaatagcttgacagagttacatgatctaaacctcggtggaaaactgagtatcaaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
30435342 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||| ||| || | ||||||||| | || |||||||| ||||| |||||||||| |
|
|
| T |
30435341 |
ctaatttgaagggtaaaaaagaccttcatgaattatgcttgtcgtggatatcgcaacaggaatctataattagatctgagcaattactcgaagagcttca |
30435242 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30435241 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcgttaccaagttggataattattcttagtaatttaatttctcttaaactt |
30435142 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
| | || |||||||||||||||||||| ||| ||||||||||||||||||| || ||| ||| | |||| ||||||||||||||||||||| |
|
|
| T |
30435141 |
ggggattgcaacaaaattgtgcggcttccgttatttggtaaactaccatctctaaaaaaacttagagtatatggtatgaataatctgaaatacttggatg |
30435042 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30435041 |
atgatgaatctgaggatggtat |
30435020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 16 - 435
Target Start/End: Complemental strand, 30483023 - 30482604
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
30483023 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatctgaagctgaagcgg |
30482924 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| || | | ||||||||| | ||||||||||||||||| |||||||||| |
|
|
| T |
30482923 |
ctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatggatatcccaacaggaatctataattagtgctgagcaagtacttgaagagcttca |
30482824 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||| | |||| || ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
30482823 |
acctcactcaaatctcaaatgcttgacaataaattacaatgaagggttatcgttaccaagttggataagccttcttagtaatttaatttctcttgaactt |
30482724 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30482723 |
cggaattgcaacaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaaaactggaattatcttatatggataatctgaaatacttggatg |
30482624 |
T |
|
| Q |
416 |
atgatgaatctgaggatggt |
435 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
30482623 |
atgatgaatctcaggatggt |
30482604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 437
Target Start/End: Original strand, 30242856 - 30243277
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30242856 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgagtatccaacacttaaacaatgttggcagtttatctgaagctgaagcgg |
30242955 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| || | | | ||||||| | ||||||||||||||||| ||| |||||| |
|
|
| T |
30242956 |
ctaatttgatgggtaaaaaagaccttcatgaattatgcttgtcatggatatcccaacatgaatctataattagtgctgagcaagtacttgaagtgcttca |
30243055 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
||||||||||||||||||||||||| | |||| || |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
30243056 |
acctcactcaaatctcaagtgcttgaaaataagtttctatgagggattatccttaccaagttggataattcttcttagtaatttaatttctcttgaactt |
30243155 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
30243156 |
cggaattgcaacaaaattgtgcggcttccgttacttggtaaactaccatatctaaaaaaactggaattattcgaaatggataatctgaaatacttggatg |
30243255 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30243256 |
atgatgaatctgaggatggtat |
30243277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 437
Target Start/End: Original strand, 30339009 - 30339430
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
30339009 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatctgaagctgaagcgg |
30339108 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttca |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||| | |||||||||||||| ||| |||||||||| |
|
|
| T |
30339109 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcgtggatatcgcaacaggaatctataattagtgctgagcaagtgctcgaagagcttca |
30339208 |
T |
|
| Q |
216 |
acctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaactt |
315 |
Q |
| |
|
|||||||||||||||||| | |||| |||||| |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| | ||| |
|
|
| T |
30339209 |
acctcactcaaatctcaattccttgacagtaaatttctatgaaggattatcgttaccaagttggataagccttcttagtaatttaatttctcttaatctt |
30339308 |
T |
|
| Q |
316 |
ttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatg |
415 |
Q |
| |
|
| ||| || ||||||||||||| ||||| ||||||||||||||||||||||| || ||| ||| | |||| ||||||||||||||||||||| |
|
|
| T |
30339309 |
tggaattgcaacaaaattgtgctgcttcagttacttggtaaactaccatctctaaaaaatcttagagtatatcgtatgaataatctgaaatacttggatg |
30339408 |
T |
|
| Q |
416 |
atgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
30339409 |
atgatgaatctgaggatggtat |
30339430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 437
Target Start/End: Original strand, 30713906 - 30714339
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
30713906 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgagtatcaaaggattaaacaatgttggcagtttatttgaagctgaagcgg |
30714005 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaag-aaggaat-----------ctacggtcagtgctgagcaagtact |
203 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||| | |||| ||||||| || || ||||||||||||||||| |
|
|
| T |
30714006 |
ctaatttgatgggtaaaaaagaccttcatgaattatacttgtcatggaaagacaaacaaggaattccaaagacccctgttgttagtgctgagcaagtact |
30714105 |
T |
|
| Q |
204 |
caaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatt |
303 |
Q |
| |
|
| |||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
30714106 |
cgaagagcttcaacctcactcaaatctcaaatgcttgacaataaattactatgaaggattatcattaccaagttggataattattcttagtaatttagtt |
30714205 |
T |
|
| Q |
304 |
tctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctga |
403 |
Q |
| |
|
|||||| |||| | | || || ||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||| ||||||||| |
|
|
| T |
30714206 |
tctcttgtacttctccattgcaagaaaattgtgcggcttccgttacttggtaaactaccatctctaaaaaaactgagattatatggtatcaataatctga |
30714305 |
T |
|
| Q |
404 |
aatacttggatgatgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
30714306 |
aatacttggatgatgatgaatctgaggatggtat |
30714339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 16 - 437
Target Start/End: Complemental strand, 30059988 - 30059555
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
30059988 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatttgaagctgaagcgg |
30059889 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatac-aagaaggaat-----------ctacggtcagtgctgagcaagtact |
203 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |||||||||| | || || ||||||| || || |||| |||||||||||| |
|
|
| T |
30059888 |
ctaatttgatgggtaaaaaagaccttcatgaattatacttgtcatggaaagacaaacaaggaattccaaagaaccctgttgttagtgttgagcaagtact |
30059789 |
T |
|
| Q |
204 |
caaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatt |
303 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||| | |||| || |||||| |||||||| || |||||||||||||||||||||||||||||| || |
|
|
| T |
30059788 |
tgaagttcttcaacctcactcaaatctcaactgcttgaaaataagtttctatgagggattatccttgccaagttggataattattcttagtaatttagtt |
30059689 |
T |
|
| Q |
304 |
tctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctga |
403 |
Q |
| |
|
|||||| ||||| | ||||| ||| |||||||||||| |||||||||| |||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
30059688 |
tctcttaaacttaagcgttgtaagaaagttgtgcggcttcagttacttggtatactaccatctttaaaaaacctggaattatcttatatggataatctga |
30059589 |
T |
|
| Q |
404 |
aatacttggatgatgatgaatctgaggatggtat |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
30059588 |
aatacttggatgatgatgaatctgaggatggtat |
30059555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 16 - 435
Target Start/End: Complemental strand, 30399696 - 30399265
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||| ||||||||| ||||| |||||| |
|
|
| T |
30399696 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatcgaaggcttaaaagattttggcagtttatctcaagctcaagcgg |
30399597 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaat------------ctacggtcagtgctgagcaagtact |
203 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||||||||||||| | ||| | | || | || | |||||| |||||||||| |
|
|
| T |
30399596 |
ctgatttgatgggtaaaaaagaccttcatgaattatgcttgtcatgggaaagcaactatggatttaccaatcccccaactattagtgctcagcaagtact |
30399497 |
T |
|
| Q |
204 |
caaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatt |
303 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
30399496 |
cgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataaattactatgacggattatcattaccaagttggataattattcttagtaatttagtt |
30399397 |
T |
|
| Q |
304 |
tctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctga |
403 |
Q |
| |
|
|||||| ||||| ||| || || ||| ||||||| |||| ||| ||||||||||||| ||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
30399396 |
tctcttgaacttgggaattgcaagaaagttgtgcgacttcagttaattggtaaactaccgtctctaaaaaaactggaattatctgatatggataatctga |
30399297 |
T |
|
| Q |
404 |
aatacttggatgatgatgaatctgaggatggt |
435 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |
|
|
| T |
30399296 |
aatacttggatgatgatgaatctcaggatggt |
30399265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 192 - 437
Target Start/End: Complemental strand, 29852742 - 29852497
Alignment:
| Q |
192 |
tgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattctt |
291 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||| ||||| |
|
|
| T |
29852742 |
tgagcaagtactcgaagagcttcaacctcactcaaatctcaagtgcttggacataaattactatgaaggattatcgttaccaagttggataagccttctt |
29852643 |
T |
|
| Q |
292 |
agtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttata |
391 |
Q |
| |
|
|||| ||||||||||||| ||||| ||| || |||||||||||||||||||| |||||| |||||||||||| ||| || ||||| | | |
|
|
| T |
29852642 |
agtagtttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgttactttgtaaactaccatatctaaaaaagttggtattattcaaaa |
29852543 |
T |
|
| Q |
392 |
tggataatctgaaatacttggatgatgatgaatctgaggatggtat |
437 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29852542 |
tggataatctgaaatacttagatgatgatgaatctgaggatggtat |
29852497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 29852930 - 29852783
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| |||| ||||| |||| || |||||||||||||||||||||| |
|
|
| T |
29852930 |
aaagggaatagcttgacagagttatgtgatctaaaccttggtggaaagctgagtatcaaaggcttaaaagatgtgggcagtttatctgaagctgaagcgg |
29852831 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggg |
163 |
Q |
| |
|
|||||||||||||||||| |||| ||||| ||||||| |||||||||| |
|
|
| T |
29852830 |
ctaatttgatgggtaaaacagacattcatgaattatgtttgtcatggg |
29852783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 22 - 422
Target Start/End: Original strand, 17418647 - 17419059
Alignment:
| Q |
22 |
aatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatt |
121 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||| || ||||| |||| ||||| ||||||||| ||||||||||||| ||| ||||| | |
|
|
| T |
17418647 |
aatagcttggtagagttaggtgatctaaacctcggtggaaaattgagtatcaaaggcttaaaagatgttggtaatttatctgaagctcaagaagctaagt |
17418746 |
T |
|
| Q |
122 |
tgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaat------------ctacggtcagtgctgagcaagtactcaaaga |
209 |
Q |
| |
|
|||| |||||||||||||| || ||||||||||||| ||| | ||| | |||| ||| || |||||||||||| |||| ||| |
|
|
| T |
17418747 |
tgataggtaaaaaagacctccaagaattatgcttgtcgtggaaaagcaacgatgaattgacaaagacccctattgttagtgctgagcaactacttgaagt |
17418846 |
T |
|
| Q |
210 |
gcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctctt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||| || |||||| ||| ||| |||||||||||||||| |||||||||||||||| || | || |
|
|
| T |
17418847 |
gcttcaacctcactcaaatctcaagtgcttgaaaataacttactatgatggaatattgttaccaagttggataagtattcttagtaatttagttaatgtt |
17418946 |
T |
|
| Q |
310 |
caacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatact |
409 |
Q |
| |
|
|||| || ||| | || |||||||||| | | | |||||||||||| |||||| ||| ||||||||| ||| | ||||||||||||| |
|
|
| T |
17418947 |
gcacttagtaattgtgagaactgtgtgcggctttcgtcatttggtaaactacaatctctaaaattactggaattatcttacatgaaaaatctgaaatact |
17419046 |
T |
|
| Q |
410 |
tggatgatgatga |
422 |
Q |
| |
|
||||||||||||| |
|
|
| T |
17419047 |
tggatgatgatga |
17419059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 30206144 - 30206020
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||| || |||||||| ||||| |||| ||||| ||||| ||||||||||||||||| |||| | |
|
|
| T |
30206144 |
aaagggaatagcttggcagagttacacgatctaaacctgggaggaaaactaagtatcaaaggtttaaatgatgtttgtagtttatctgaagctcaagcag |
30206045 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagacct |
140 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
30206044 |
ccaatttgatgggtaaaaaagacct |
30206020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 290 - 437
Target Start/End: Complemental strand, 4381003 - 4380856
Alignment:
| Q |
290 |
ttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatctta |
389 |
Q |
| |
|
|||||||||||||||||||| |||||| || |||||| ||||||||||||| | ||||||||||||| ||||||| || ||||| | |
|
|
| T |
4381003 |
ttagtaatttaatttctcttaaactttgtgtttgcaacaaagttgtgcggcttccgtcacttggtaaactaacatctctaaaaaaattggaattatttcg |
4380904 |
T |
|
| Q |
390 |
tatggataatctgaaatacttggatgatgatgaatctgaggatggtat |
437 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4380903 |
tacggataatctgaaatacttggatgatgatgaatttgaggatggtat |
4380856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 366
Target Start/End: Complemental strand, 30205938 - 30205782
Alignment:
| Q |
210 |
gcttcaacctcactcaaatctcaagtgcttggatataaattg---ctatgacggattatcattaccaagttggataattattcttagtaatttaatttct |
306 |
Q |
| |
|
||||||||||||||||||||||||| | ||| |||| ||| |||| || |||||| |||||||||||||||| |||||| ||||||||| || || |
|
|
| T |
30205938 |
gcttcaacctcactcaaatctcaagaggttg---ataatttgtcactataacagattattcttaccaagttggataagtattctcagtaatttagttgct |
30205842 |
T |
|
| Q |
307 |
cttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatct |
366 |
Q |
| |
|
||| ||||| ||| ||| | ||| |||||||||||| | | |||||||||||| |||| |
|
|
| T |
30205841 |
cttgtactttggaattgtgagaaatgtgtgcggcttccgtcatttggtaaactacaatct |
30205782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 30474818 - 30474742
Alignment:
| Q |
189 |
tgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattat |
265 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||| | ||| | ||| || |||||||||||||| |
|
|
| T |
30474818 |
tgctgagcaagtacttgaaatgcttcaacctcactcaaatctcaagaggttgaaaatactttactatgacggattat |
30474742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 17982470 - 17982400
Alignment:
| Q |
92 |
gtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatgg |
162 |
Q |
| |
|
||||||||||||||| ||||| || ||||| || |||||||||||||| || |||||||| |||||||| |
|
|
| T |
17982470 |
gtagtttatctgaagttgaagaagcaaattttataggtaaaaaagacctcaatgaattatgcctgtcatgg |
17982400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 30522309 - 30522362
Alignment:
| Q |
210 |
gcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggatt |
263 |
Q |
| |
|
||||||||||||||||||||||||| |||| | ||| || ||||||||||||| |
|
|
| T |
30522309 |
gcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30522362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 30562649 - 30562702
Alignment:
| Q |
210 |
gcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggatt |
263 |
Q |
| |
|
||||||||||||||||||||||||| |||| | ||| || ||||||||||||| |
|
|
| T |
30562649 |
gcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30562702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 434
Target Start/End: Complemental strand, 26706963 - 26706533
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||||||| ||| | |
|
|
| T |
26706963 |
aaagggaatagcttgacagagttacgtgatctaaacctcggtggaaaactgagtatcgaaggcttaaaagatgttggcagtttatctgaagctcaagaag |
26706864 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaa-gaaggaat-----------ctacggtcagtgctgagcaagtact |
203 |
Q |
| |
|
| ||||||||||| |||||| |||| | |||||||||||||||||| | |||| || ||| | | || | |||| |||||| |||| |
|
|
| T |
26706863 |
ccaatttgatggggaaaaaaaacctcgaaaaattatgcttgtcatgggaaaacaatgatggatttaccaagccaccaactattagtgttgagcagctact |
26706764 |
T |
|
| Q |
204 |
caaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatt |
303 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||||||| || |
|
|
| T |
26706763 |
caaagtgcttcaacctcactcaaatctcaagtgcttggaaataaagtactacgacggattatcattaccaagttgggtaagtattcttagtaatttagtt |
26706664 |
T |
|
| Q |
304 |
tctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctga |
403 |
Q |
| |
|
|||||| ||||| | | || || ||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||| |||||||| |
|
|
| T |
26706663 |
tctcttgaacttggggattgcaagaaatttgtgcggcttccgttacttggtaaactaccatctctagaaaaactggaattatcttctatggttaatctga |
26706564 |
T |
|
| Q |
404 |
aatacttggatgatgatgaatctgaggatgg |
434 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |
|
|
| T |
26706563 |
aatacttggatgatgatgaatctcaggatgg |
26706533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 16 - 436
Target Start/End: Original strand, 20297075 - 20297507
Alignment:
| Q |
16 |
aaagggaatagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcgg |
115 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||| |||| ||||| ||||||| ||| ||||||||||| ||| | |
|
|
| T |
20297075 |
aaagggaatagcttgacagagttacgtgatctaaaacttggtggaaaactgagtatcaaaggcttaaaagatgttggcagtatatctgaagctcaagaag |
20297174 |
T |
|
| Q |
116 |
ctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatggggatacaagaaggaatctacg------------gtcagtgctgagcaagtact |
203 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| |||| | ||| | ||| ||| || ||||||||| ||||||| |
|
|
| T |
20297175 |
ccaatttgatgggtaaaaaagaccttcatgaattatgcttgtcttgggaaagcaatgataaatttaccaagccaccaactgtaagtgctgagaaagtact |
20297274 |
T |
|
| Q |
204 |
caaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatt |
303 |
Q |
| |
|
| ||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| || |
|
|
| T |
20297275 |
cgaagtgcttcaacctcagtcaaatctcaagtgcttggaaataaattgctatgatggattgtggttaccaagttggataattattcttagtaatttagtt |
20297374 |
T |
|
| Q |
304 |
tctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctga |
403 |
Q |
| |
|
||| || ||||| ||| || ||| ||||||||| |||||| ||| ||||||||||||||||||| |||| | ||||| |||| ||||||||| |
|
|
| T |
20297375 |
tcttttgaacttgagaattgcaacgaaattgtgcagcttccgttaattggtaaactaccatctctaaaaaaactgacaatatctggtatgtataatctga |
20297474 |
T |
|
| Q |
404 |
aatacttggatgatgatgaatctgaggatggta |
436 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |
|
|
| T |
20297475 |
aatacttggatgatgatgaatctcgggatggta |
20297507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 7099036 - 7098897
Alignment:
| Q |
23 |
atagcttgtcagagttacgtgatctaaacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaattt |
122 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| ||| ||| |||| ||| | |||||||||||||||||||||||| ||| || ||||| |
|
|
| T |
7099036 |
atagcttagcagagttacgtgatctaaatttaggaggaaagctggagatcaaaggcttacaaaatgttggtagtttatctgaagctaaagaagccaattt |
7098937 |
T |
|
| Q |
123 |
gatgggtaaaaaagaccttcatcaattatgcttgtcatgg |
162 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
7098936 |
aatgggtaaaaaagacctcgatgaattatgcttgtcatgg |
7098897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 7582272 - 7582349
Alignment:
| Q |
85 |
aatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatgg |
162 |
Q |
| |
|
||||| |||||||||||||||||| ||| || || |||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
7582272 |
aatgtcggtagtttatctgaagctcaagaagccaacttgatgggtaaaaaagacctcgatgaattatgcttgtcatgg |
7582349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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