View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15717_low_14 (Length: 245)

Name: NF15717_low_14
Description: NF15717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15717_low_14
NF15717_low_14
[»] chr4 (1 HSPs)
chr4 (113-148)||(7558005-7558040)


Alignment Details
Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 148
Target Start/End: Original strand, 7558005 - 7558040
Alignment:
113 gaggaagtgaaggggaccaaacttaaactcagtgat 148  Q
    ||||||||||||||||||||||||||||||||||||    
7558005 gaggaagtgaaggggaccaaacttaaactcagtgat 7558040  T

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