View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15718_high_14 (Length: 443)

Name: NF15718_high_14
Description: NF15718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15718_high_14
NF15718_high_14
[»] chr4 (56 HSPs)
chr4 (5-344)||(4243128-4243466)
chr4 (372-427)||(4243044-4243099)
chr4 (186-252)||(33640988-33641053)
chr4 (13-65)||(33843996-33844048)
chr4 (153-252)||(485961-486058)
chr4 (131-248)||(22684586-22684702)
chr4 (150-255)||(8422927-8423030)
chr4 (14-78)||(10185200-10185264)
chr4 (14-66)||(17714686-17714738)
chr4 (128-251)||(24443919-24444041)
chr4 (13-64)||(2206357-2206408)
chr4 (157-251)||(24193466-24193558)
chr4 (83-128)||(2635054-2635099)
chr4 (150-207)||(51555957-51556013)
chr4 (14-66)||(33843701-33843753)
chr4 (128-251)||(49219020-49219142)
chr4 (18-64)||(2206856-2206902)
chr4 (153-251)||(17125723-17125819)
chr4 (183-249)||(46053583-46053648)
chr4 (29-78)||(8330122-8330171)
chr4 (151-215)||(23503474-23503538)
chr4 (128-251)||(23676597-23676720)
chr4 (128-244)||(30024588-30024703)
chr4 (18-55)||(35065092-35065129)
chr4 (191-252)||(47771875-47771935)
chr4 (128-208)||(54325104-54325184)
chr4 (10-62)||(2635185-2635236)
chr4 (14-58)||(7066596-7066640)
chr4 (13-65)||(29904251-29904303)
chr4 (13-57)||(32818384-32818428)
chr4 (13-57)||(37439172-37439216)
chr4 (14-54)||(41751287-41751327)
chr4 (14-54)||(47596316-47596356)
chr4 (152-235)||(4471068-4471149)
chr4 (25-64)||(6925286-6925325)
chr4 (13-76)||(22250234-22250297)
chr4 (150-253)||(24929372-24929473)
chr4 (18-57)||(45011901-45011940)
chr4 (13-64)||(45329868-45329919)
chr4 (13-64)||(55927784-55927835)
chr4 (193-251)||(6360837-6360894)
chr4 (158-252)||(6427914-6428006)
chr4 (19-65)||(20712670-20712715)
chr4 (155-257)||(40709475-40709575)
chr4 (164-234)||(41241648-41241716)
chr4 (130-219)||(44319862-44319950)
chr4 (128-173)||(2838234-2838279)
chr4 (220-253)||(19304456-19304489)
chr4 (29-78)||(29728991-29729040)
chr4 (183-244)||(54414837-54414897)
chr4 (17-57)||(1048744-1048784)
chr4 (22-62)||(2206540-2206580)
chr4 (157-213)||(4191657-4191712)
chr4 (150-214)||(19422335-19422398)
chr4 (83-127)||(33843583-33843627)
chr4 (183-251)||(39063768-39063835)
[»] chr5 (43 HSPs)
chr5 (150-252)||(20982225-20982325)
chr5 (153-250)||(26516180-26516275)
chr5 (14-76)||(24306111-24306173)
chr5 (14-76)||(24367143-24367205)
chr5 (183-253)||(14716592-14716661)
chr5 (183-245)||(23999043-23999104)
chr5 (154-219)||(4991037-4991101)
chr5 (150-251)||(39257476-39257575)
chr5 (191-251)||(31687906-31687965)
chr5 (154-220)||(10391264-10391329)
chr5 (13-78)||(10898729-10898792)
chr5 (155-209)||(11684345-11684398)
chr5 (182-256)||(12241999-12242072)
chr5 (154-252)||(29588761-29588856)
chr5 (150-248)||(37063164-37063260)
chr5 (195-252)||(6725117-6725173)
chr5 (150-251)||(32172534-32172633)
chr5 (212-252)||(12521446-12521485)
chr5 (183-252)||(16945103-16945173)
chr5 (128-219)||(35135729-35135820)
chr5 (13-65)||(36639956-36640008)
chr5 (192-259)||(38728249-38728315)
chr5 (130-252)||(39823190-39823312)
chr5 (197-251)||(8471990-8472043)
chr5 (27-65)||(15874016-15874054)
chr5 (191-253)||(40336001-40336062)
chr5 (183-252)||(3951498-3951565)
chr5 (183-252)||(11457003-11457071)
chr5 (28-57)||(18637311-18637340)
chr5 (146-207)||(19113203-19113263)
chr5 (150-251)||(29115303-29115402)
chr5 (141-214)||(35095864-35095936)
chr5 (220-252)||(1550808-1550840)
chr5 (191-251)||(6938845-6938904)
chr5 (220-256)||(7026411-7026447)
chr5 (196-252)||(7097342-7097397)
chr5 (219-251)||(12408223-12408255)
chr5 (220-252)||(19535456-19535488)
chr5 (183-251)||(33961584-33961651)
chr5 (183-219)||(35963160-35963196)
chr5 (183-251)||(41052771-41052838)
chr5 (22-78)||(42857896-42857952)
chr5 (13-61)||(42858131-42858179)
[»] chr7 (36 HSPs)
chr7 (133-252)||(31341074-31341192)
chr7 (128-254)||(49060418-49060543)
chr7 (150-258)||(753294-753400)
chr7 (17-76)||(27571870-27571929)
chr7 (150-251)||(30133932-30134029)
chr7 (14-64)||(30182311-30182361)
chr7 (150-252)||(7100709-7100807)
chr7 (193-256)||(2012764-2012826)
chr7 (152-235)||(8445183-8445264)
chr7 (16-65)||(38123683-38123732)
chr7 (150-250)||(45593809-45593906)
chr7 (147-206)||(46213728-46213786)
chr7 (183-252)||(657806-657874)
chr7 (195-256)||(5630049-5630109)
chr7 (157-250)||(22388001-22388092)
chr7 (183-252)||(28844366-28844434)
chr7 (150-207)||(30751441-30751497)
chr7 (150-214)||(5373142-5373205)
chr7 (21-57)||(12306748-12306784)
chr7 (131-249)||(18749880-18749995)
chr7 (164-220)||(45078204-45078259)
chr7 (150-245)||(5938971-5939064)
chr7 (129-219)||(24975816-24975906)
chr7 (154-245)||(26935644-26935733)
chr7 (165-252)||(27481399-27481484)
chr7 (128-253)||(12835004-12835128)
chr7 (19-57)||(40491605-40491643)
chr7 (191-249)||(46281333-46281390)
chr7 (191-252)||(5620224-5620284)
chr7 (140-213)||(30496622-30496694)
chr7 (128-212)||(35536026-35536110)
chr7 (193-256)||(2030566-2030629)
chr7 (150-214)||(5276141-5276204)
chr7 (220-252)||(28340554-28340586)
chr7 (150-214)||(29574691-29574754)
chr7 (225-253)||(46609249-46609277)
[»] chr1 (48 HSPs)
chr1 (128-251)||(17420084-17420206)
chr1 (5-65)||(10324944-10325004)
chr1 (13-61)||(17284119-17284167)
chr1 (151-247)||(49557026-49557120)
chr1 (13-64)||(39395908-39395959)
chr1 (150-251)||(48282013-48282114)
chr1 (150-214)||(870962-871025)
chr1 (13-57)||(28287350-28287394)
chr1 (20-64)||(29759632-29759676)
chr1 (22-78)||(33693027-33693083)
chr1 (13-56)||(213551-213594)
chr1 (18-65)||(3515837-3515884)
chr1 (140-219)||(7274019-7274097)
chr1 (154-249)||(29794016-29794109)
chr1 (193-252)||(48133071-48133129)
chr1 (12-51)||(52013491-52013530)
chr1 (128-233)||(4200128-4200232)
chr1 (183-249)||(24263261-24263326)
chr1 (183-245)||(49173292-49173353)
chr1 (128-252)||(49516949-49517073)
chr1 (151-248)||(44236622-44236717)
chr1 (191-256)||(49365918-49365982)
chr1 (13-57)||(7524140-7524184)
chr1 (13-57)||(11049277-11049321)
chr1 (156-232)||(46504313-46504387)
chr1 (13-65)||(47892402-47892454)
chr1 (18-65)||(20720835-20720882)
chr1 (182-253)||(49560680-49560750)
chr1 (19-65)||(4458595-4458641)
chr1 (154-248)||(6031573-6031663)
chr1 (18-76)||(34387712-34387770)
chr1 (191-249)||(52542447-52542504)
chr1 (13-50)||(7790656-7790693)
chr1 (28-57)||(15084624-15084653)
chr1 (183-252)||(17628266-17628334)
chr1 (153-218)||(23895249-23895313)
chr1 (194-251)||(30237879-30237935)
chr1 (150-223)||(42336570-42336642)
chr1 (13-65)||(48549028-48549078)
chr1 (28-57)||(51500863-51500892)
chr1 (13-57)||(1514370-1514414)
chr1 (13-57)||(6021831-6021875)
chr1 (13-57)||(20026178-20026222)
chr1 (17-62)||(24587932-24587979)
chr1 (183-251)||(24857636-24857703)
chr1 (220-252)||(24967928-24967960)
chr1 (14-54)||(43018494-43018534)
chr1 (220-248)||(47598564-47598592)
[»] scaffold0590 (1 HSPs)
scaffold0590 (150-254)||(1164-1266)
[»] scaffold0275 (1 HSPs)
scaffold0275 (150-254)||(2709-2811)
[»] chr8 (39 HSPs)
chr8 (140-256)||(14482078-14482192)
chr8 (150-252)||(28769429-28769529)
chr8 (128-249)||(31884477-31884597)
chr8 (128-251)||(35869718-35869840)
chr8 (140-251)||(41336725-41336834)
chr8 (165-249)||(10722514-10722597)
chr8 (129-219)||(3645884-3645974)
chr8 (169-248)||(6918915-6918992)
chr8 (196-251)||(6950217-6950271)
chr8 (162-252)||(8536150-8536238)
chr8 (183-249)||(12972739-12972804)
chr8 (127-244)||(35453689-35453805)
chr8 (13-58)||(4336639-4336684)
chr8 (151-252)||(7026611-7026710)
chr8 (191-252)||(31875689-31875749)
chr8 (151-251)||(4558679-4558777)
chr8 (13-57)||(13384668-13384712)
chr8 (13-57)||(26100160-26100204)
chr8 (184-256)||(27754556-27754627)
chr8 (172-256)||(29592644-29592726)
chr8 (20-75)||(4554344-4554399)
chr8 (13-76)||(13418833-13418896)
chr8 (183-249)||(2107448-2107513)
chr8 (150-252)||(2364563-2364663)
chr8 (195-249)||(12496561-12496614)
chr8 (183-261)||(14929299-14929376)
chr8 (13-55)||(34478208-34478250)
chr8 (183-249)||(35220823-35220888)
chr8 (13-51)||(35495293-35495331)
chr8 (21-51)||(39648163-39648193)
chr8 (200-249)||(7008512-7008560)
chr8 (198-251)||(26499594-26499646)
chr8 (14-51)||(33713242-33713279)
chr8 (150-215)||(34788517-34788581)
chr8 (150-219)||(39392751-39392819)
chr8 (13-57)||(4662917-4662961)
chr8 (13-57)||(32767414-32767458)
chr8 (13-57)||(32927919-32927963)
chr8 (13-57)||(35495017-35495061)
[»] chr6 (51 HSPs)
chr6 (13-65)||(1485160-1485212)
chr6 (154-252)||(33068655-33068751)
chr6 (13-78)||(30926792-30926857)
chr6 (16-64)||(31305864-31305912)
chr6 (150-252)||(32975858-32975958)
chr6 (129-261)||(2206461-2206592)
chr6 (13-78)||(9505776-9505841)
chr6 (4-57)||(34027422-34027475)
chr6 (191-249)||(4247214-4247271)
chr6 (131-251)||(7713906-7714025)
chr6 (17-57)||(2234542-2234582)
chr6 (150-254)||(3217280-3217382)
chr6 (128-243)||(10452427-10452541)
chr6 (13-65)||(10874513-10874565)
chr6 (128-219)||(22742278-22742369)
chr6 (193-261)||(33828517-33828584)
chr6 (13-64)||(17225872-17225923)
chr6 (134-208)||(29269819-29269892)
chr6 (157-251)||(31461559-31461651)
chr6 (150-219)||(4248870-4248938)
chr6 (151-236)||(8349755-8349838)
chr6 (150-247)||(9833187-9833282)
chr6 (194-251)||(14340936-14340992)
chr6 (128-219)||(2514614-2514705)
chr6 (183-251)||(3155057-3155124)
chr6 (150-214)||(13360652-13360715)
chr6 (128-251)||(27857258-27857377)
chr6 (220-252)||(33500630-33500662)
chr6 (17-57)||(34620913-34620953)
chr6 (17-57)||(34748350-34748390)
chr6 (14-65)||(852551-852602)
chr6 (156-219)||(31668781-31668843)
chr6 (151-248)||(7351699-7351792)
chr6 (19-49)||(7952569-7952599)
chr6 (15-53)||(25388108-25388146)
chr6 (164-234)||(28130029-28130097)
chr6 (191-252)||(21919954-21920014)
chr6 (145-214)||(28531626-28531694)
chr6 (128-208)||(29274296-29274376)
chr6 (220-253)||(31807984-31808017)
chr6 (158-251)||(33259698-33259788)
chr6 (13-54)||(34898726-34898767)
chr6 (150-249)||(740955-741055)
chr6 (195-251)||(2205704-2205760)
chr6 (191-251)||(2785798-2785857)
chr6 (183-247)||(4003722-4003785)
chr6 (13-57)||(4910935-4910979)
chr6 (13-57)||(25195877-25195921)
chr6 (13-57)||(26679977-26680021)
chr6 (197-261)||(30004773-30004836)
chr6 (155-251)||(33416267-33416360)
[»] chr2 (46 HSPs)
chr2 (129-252)||(3102573-3102695)
chr2 (152-251)||(5133652-5133750)
chr2 (13-66)||(33961995-33962048)
chr2 (151-251)||(5942806-5942904)
chr2 (151-250)||(39567784-39567882)
chr2 (13-61)||(44439277-44439325)
chr2 (150-248)||(10198568-10198664)
chr2 (150-256)||(33197329-33197433)
chr2 (19-57)||(42741004-42741042)
chr2 (17-61)||(8481285-8481329)
chr2 (151-251)||(18962129-18962228)
chr2 (183-251)||(42974233-42974300)
chr2 (17-65)||(42982563-42982611)
chr2 (13-64)||(3476443-3476494)
chr2 (14-65)||(10618956-10619007)
chr2 (128-214)||(15866735-15866821)
chr2 (15-53)||(7139706-7139744)
chr2 (153-251)||(11393459-11393555)
chr2 (153-251)||(11410120-11410216)
chr2 (195-263)||(13869229-13869296)
chr2 (17-65)||(16488347-16488395)
chr2 (150-249)||(5903184-5903281)
chr2 (140-219)||(35459822-35459900)
chr2 (150-209)||(37766720-37766778)
chr2 (148-207)||(37845440-37845498)
chr2 (147-230)||(41240964-41241045)
chr2 (152-215)||(44606180-44606242)
chr2 (18-76)||(3352084-3352142)
chr2 (191-249)||(6561250-6561307)
chr2 (24-62)||(7630215-7630253)
chr2 (150-244)||(28803596-28803688)
chr2 (17-47)||(37420213-37420243)
chr2 (183-252)||(4550657-4550725)
chr2 (16-49)||(16013727-16013760)
chr2 (150-254)||(32098398-32098503)
chr2 (194-235)||(42817509-42817549)
chr2 (183-252)||(43635222-43635290)
chr2 (151-235)||(43808473-43808555)
chr2 (13-57)||(1305919-1305963)
chr2 (17-57)||(4894175-4894215)
chr2 (127-174)||(6546934-6546982)
chr2 (13-53)||(11759873-11759913)
chr2 (128-204)||(13864577-13864651)
chr2 (130-213)||(17952770-17952853)
chr2 (220-260)||(34764194-34764234)
chr2 (16-64)||(41494088-41494136)
[»] chr3 (46 HSPs)
chr3 (13-59)||(46853548-46853594)
chr3 (140-252)||(49772748-49772860)
chr3 (191-251)||(27291029-27291089)
chr3 (13-65)||(35264425-35264477)
chr3 (13-65)||(44958620-44958672)
chr3 (13-64)||(23187865-23187916)
chr3 (13-65)||(35058380-35058433)
chr3 (15-65)||(3845129-3845180)
chr3 (13-64)||(38332568-38332619)
chr3 (14-57)||(51285597-51285640)
chr3 (150-256)||(34317964-34318068)
chr3 (150-251)||(905060-905159)
chr3 (20-65)||(3776541-3776586)
chr3 (153-214)||(25964359-25964419)
chr3 (13-65)||(27266808-27266860)
chr3 (13-57)||(37335048-37335092)
chr3 (17-65)||(46018623-46018671)
chr3 (201-260)||(12985464-12985522)
chr3 (18-57)||(35253486-35253525)
chr3 (220-255)||(37273054-37273089)
chr3 (25-76)||(39256684-39256735)
chr3 (150-209)||(41028941-41028999)
chr3 (150-220)||(3757959-3758028)
chr3 (153-219)||(16790181-16790246)
chr3 (153-207)||(16790449-16790502)
chr3 (183-253)||(28289243-28289312)
chr3 (166-216)||(28842964-28843012)
chr3 (19-57)||(32523360-32523398)
chr3 (210-252)||(37308214-37308255)
chr3 (191-253)||(44240042-44240103)
chr3 (140-209)||(44374724-44374792)
chr3 (195-252)||(2081212-2081268)
chr3 (191-252)||(20504092-20504152)
chr3 (13-54)||(30301012-30301053)
chr3 (13-62)||(36302205-36302254)
chr3 (21-53)||(2076485-2076517)
chr3 (128-199)||(20192673-20192744)
chr3 (183-243)||(29094270-29094329)
chr3 (151-242)||(31075580-31075673)
chr3 (128-208)||(39971242-39971320)
chr3 (150-210)||(41159030-41159089)
chr3 (128-251)||(43116495-43116617)
chr3 (183-251)||(48271968-48272035)
chr3 (153-241)||(49739458-49739544)
chr3 (183-251)||(52323999-52324066)
chr3 (87-127)||(52363957-52363997)
[»] scaffold0024 (1 HSPs)
scaffold0024 (128-252)||(27456-27579)
[»] scaffold0085 (1 HSPs)
scaffold0085 (195-249)||(26175-26228)
[»] scaffold0361 (1 HSPs)
scaffold0361 (17-57)||(14132-14172)
[»] scaffold0060 (1 HSPs)
scaffold0060 (152-207)||(63377-63431)
[»] scaffold0455 (1 HSPs)
scaffold0455 (164-234)||(8616-8684)


Alignment Details
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 5 - 344
Target Start/End: Complemental strand, 4243466 - 4243128
Alignment:
Q  5 agtgagaagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagttacaaactagaatcagttttggtccctc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4243466 agtgagtagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagttacaaactagaatcagttttggtccctc 4243367  T
Q  105 aaaaagtgaaaccaaacatacactatagcttatataaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatga 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4243366 aaaaagtgaaaccaaagatacactatagcttatataaaactattcgactttattttatattttgt-ataagaatagcattatacacaagcacttatatga 4243268  T
Q  205 taagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataatcatcatcgatcaaagttgtttgcattacttcaccttgaaattc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4243267 taagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataatcatcatcgatcaaagttgtttgcattacttcaccttgaaattc 4243168  T
Q  305 attctttacagttgaatataaaagaatatttacagtaagc 344  Q
    || |||||||||||||||||||||||||||||||||||||    
T  4243167 atactttacagttgaatataaaagaatatttacagtaagc 4243128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 4243099 - 4243044
Alignment:
Q  372 gagttcgtactttagggcatgatcggagtattctttgaagattaatgtgagcttca 427  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4243099 gagttcgtactttagggcatgatcggagtattctttgaagattagtgtgagcttca 4243044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 33641053 - 33640988
Alignment:
Q  186 tacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  33641053 tacaaaagcacttatatgataagcgattattcta-taagcacttaattaagctgtttatccaaacag 33640988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 33844048 - 33843996
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  33844048 gaacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaatttc 33843996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 486058 - 485961
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||| ||||||| ||  |||||||| ||||| |||||||| ||||||||||||||||||| |||||| ||||||||||  ||| ||||||||||    
T  486058 tttattttatcttttgttttagaaatagcat-atacataagcacttttatgataagcgcttatgct-ataagcgcttaattaagtagttcatccaaacag 485961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 22684586 - 22684702
Alignment:
Q  131 agcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcactt 229  Q
    ||||||||| ||||| ||| ||||||||||||   |||||||||  |||||| ||||||| ||||| ||||||||||||||| |||| | ||||||| ||    
T  22684586 agcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagc-ttatacagaagcatttatatgataagcgcatatggt-ataagcaatt 22684683  T
Q  230 aattaagctgtttatccaa 248  Q
    ||||||| |||||||||||    
T  22684684 aattaagttgtttatccaa 22684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 8422927 - 8423030
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| |||| |||||| |||||| ||||||| |||||| |||||||||   | |||||||| ||| |||||||||||| ||||||||||||    
T  8422927 gactttattttatctttttttataaaaatagc-ttatacataagcacatatatgatacatgattatgcta-taaacacttaattaagttgtttatccaaa 8423024  T
Q  250 cagagc 255  Q
    | ||||    
T  8423025 ctgagc 8423030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 10185264 - 10185200
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||   ||||||||||    
T  10185264 aacaataaatttgagtgtaaagatcaattttagaatcaaaagcttcaatttctaccttcaagtta 10185200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 17714738 - 17714686
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttca 66  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  17714738 aacaataaatttgagtgcaaaaatcaattctataatcaaaagctcgaatttca 17714686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 24444041 - 24443919
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| |||| | || || |||||||||||||||||| ||  ||| || ||||||| ||| |||||||||||||| ||||||||| ||||||     
T  24444041 tatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgc-ttatacataagaacttatatgataagtgcttatgct-ataagcg 24443944  T
Q  227 cttaattaagctgtttatccaaaca 251  Q
    |||||| ||| ||| ||||||||||    
T  24443943 cttaataaagttgtgtatccaaaca 24443919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 2206357 - 2206408
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  2206357 gaacgataaatttgagtgcaaaaatcaatcctagaatcaaaagctccaattt 2206408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 24193558 - 24193466
Alignment:
Q  157 ttttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||||||||||| ||| |||| | ||||||| ||| |||||||||||||||| ||||||| |||||  || ||||||| ||||||||||||||    
T  24193558 ttttatattttgttgtaaaaataac-ttatacataagtacttatatgataagcgtttatgct-ataagtgctcaattaagttgtttatccaaaca 24193466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 2635099 - 2635054
Alignment:
Q  83 ctagaatcagttttggtccctcaaaaagtgaaaccaaacatacact 128  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  2635099 ctagaatcaattttggtccctctaaaagtgaaaccaaacatacact 2635054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 51555957 - 51556013
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    ||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||    
T  51555957 gactttattttatcttttgttataataatagc-ttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 33843753 - 33843701
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttca 66  Q
    |||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  33843753 aacaataaatttgagtgttaaaatcaattttaggataaaaagctccaatttca 33843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 49219142 - 49219020
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| ||| || || ||||||||||||||||||||||||  |||| | ||||||  || |||| |||||||||||||  ||||| |||||||    
T  49219142 tatagcttatatgaaaataatttgactttattttatattttgttatagaaataac-ttatacctaaccactcatatgataagcgccaatgct-ataagca 49219045  T
Q  227 cttaattaagctgtttatccaaaca 251  Q
    ||||| ||||||   ||||||||||    
T  49219044 cttaactaagctacatatccaaaca 49219020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 2206902 - 2206856
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  2206902 ataaatttgagtgttaaagtcaattctaaaatcaaaagctccaattt 2206856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 17125723 - 17125819
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||||||||||||||||||| |||||| ||||||| || || | || ||||||| | ||||||| || |||||||||| ||  ||||||||||||||    
T  17125723 tttattttatattttgttataaaaatagc-ttatacataaacaataatgtgataagagattatgct-attagcacttaataaaattgtttatccaaaca 17125819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 46053648 - 46053583
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||| ||| ||||||||||||||  || |||||| ||||| |||||||||||||||||||||||    
T  46053648 ttatacataagtacttatatgataagtactcatgcta-taagcgcttaattaagctgtttatccaaa 46053583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 8330171 - 8330122
Alignment:
Q  29 tgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    |||||||||||||| ||||||||||||||||||||||   ||||||||||    
T  8330171 tgtaaaaatcaattatagaatcaaaagctccaatttctagcttcaagtta 8330122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 215
Target Start/End: Complemental strand, 23503538 - 23503474
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttat-atgataagcgcttat 215  Q
    |||||||||||||||||||||| |||||   |||||||| |||||||||| |||||||||||||||    
T  23503538 actttattttatattttgttat-agaattagattatacataagcacttatcatgataagcgcttat 23503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 23676720 - 23676597
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttg-ttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagc 225  Q
    ||||||||||| |||| || |||||||||||||||| ||||  || ||  ||||| |||||||| |||||||||||||| ||||  ||| |||| |||||    
T  23676720 tatagcttataaaaaaatagttcgactttattttatctttttattgtataaatag-attatacaaaagcacttatatgacaagcatttaagcta-taagc 23676623  T
Q  226 acttaattaagctgtttatccaaaca 251  Q
    ||||| ||||  ||||||||||||||    
T  23676622 acttagttaaattgtttatccaaaca 23676597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 244
Target Start/End: Complemental strand, 30024703 - 30024588
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| ||||| |||  |||||||||||| ||||||||||  |||| | |||| || ||| ||||||||||||| ||||| | || |||| ||    
T  30024703 tatagcttatatgaaaacaattttactttattttatcttttgttatagaaataac-ttatgcataagtacttatatgataaacgcttctact-ataaaca 30024606  T
Q  227 cttaattaagctgtttat 244  Q
    |||||||||| |||||||    
T  30024605 cttaattaagttgtttat 30024588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 35065129 - 35065092
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaag 55  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35065129 ataaatttgtgtgtaaaaatcaattctagaatcaaaag 35065092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 47771935 - 47771875
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||| ||||||||||||||||||||||| |||||| |  || ||||||||||||||||||||    
T  47771935 aagcgcttatatgataagcgcttatgct-ataagctccaaaataagctgtttatccaaacag 47771875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 54325104 - 54325184
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataag 208  Q
    |||||||||||| |||||  || ||||||||||||| |||||| |||  |||||  ||||||||||||||||||||||||||    
T  54325104 tatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagt-ttatacacaagcacttatatgataag 54325184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 2635236 - 2635185
Alignment:
Q  10 gaagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaat 62  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||||    
T  2635236 gaagaacaa-aaatttgagtcttaaaatcaattctagactcaaaagctccaat 2635185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 7066596 - 7066640
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctc 58  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  7066596 aacaataaatttgagtgtgaaaatccattgtagaatcaaaagctc 7066640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 29904303 - 29904251
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||||||||||||||| |||| ||||||||| | ||||| |||||||    
T  29904303 gaacaataaatttgagtgtaaacatcagttctagaattagaagctacaatttc 29904251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 32818384 - 32818428
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||||    
T  32818384 gaactataaatttgtgtgcaaaaatcaattctagaatcaaaagct 32818428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 37439216 - 37439172
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||    
T  37439216 gaacaataaaattgagtgtaaaaatcaattatagaattaaaagct 37439172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 41751287 - 41751327
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaa 54  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  41751287 aacaataaatttaagtttaaaaatcaattctagaatcaaaa 41751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 47596316 - 47596356
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaa 54  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  47596316 aacaataaatttgagtgtaaaaatcaattttataatcaaaa 47596356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 4471149 - 4471068
Alignment:
Q  152 ctttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaa 235  Q
    ||||||||||| ||||||||||| |||||  |||| || |||||||||||| ||||  ||||||||| ||||||| ||||||||    
T  4471149 ctttattttatcttttgttataaaaatag-tttatgcataagcacttatataataattgcttatgct-ataagcagttaattaa 4471068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 6925325 - 6925286
Alignment:
Q  25 tgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  6925325 tgagtgtaaaaatcaattctacaatcaaaaactccaattt 6925286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 22250297 - 22250234
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    ||||||||||||||||| | |||| |||||  ||||||||||||| ||||||| | ||||||||    
T  22250297 gaacaataaatttgagtattaaaagcaatttcagaatcaaaagcttcaatttcttgcttcaagt 22250234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 24929473 - 24929372
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||||||||  |||||  | ||||| || || |||||||||||| | ||||| || ||| |||| ||||||| ||||||||||||    
T  24929473 gactttattttatcttttgttatagaaatagt-tcatacaaaaacaattatatgataagagattatgtta-taaacactcaattaagttgtttatccaaa 24929376  T
Q  250 caga 253  Q
    ||||    
T  24929375 caga 24929372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 45011940 - 45011901
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  45011940 ataaatttgtgtgtgaaaatcaattctagaatcaaaagct 45011901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 45329919 - 45329868
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||| ||||||||||||||| ||||||| |||||||||||| | ||||||    
T  45329919 gaacaaaaaatttgagtgtaaatatcaattttagaatcaaaagattcaattt 45329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 55927784 - 55927835
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    ||||||||||||||||||| |  |||||||||||||||| ||||| ||||||    
T  55927784 gaacaataaatttgagtgtgacgatcaattctagaatcagaagctacaattt 55927835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 6360837 - 6360894
Alignment:
Q  193 gcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||| || ||||||||  ||||||||| |||||||| |||||||||||    
T  6360837 gcacttatatgataaacgtttatgctac-aagcacttatttaagctggttatccaaaca 6360894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 6428006 - 6427914
Alignment:
Q  158 tttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||| ||||||||||| |||||  |||| || || ||||| ||| |||||| | ||||  |||||||||||||||||| |||||||||||||||    
T  6428006 tttatcttttgttataaaaatagt-ttatgcaaaaacacttgtattataagcacgtatgg-aataagcacttaattaagttgtttatccaaacag 6427914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20712715 - 20712670
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||    
T  20712715 taaaattgagtgtaaaaatcaattatagaat-aaaagctccaatttc 20712670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 40709475 - 40709575
Alignment:
Q  155 tattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagag 254  Q
    |||||||| ||||||||||  || ||| ||||| | ||||||||||||  |||| | ||||| || |||||||||||||||| |||||||||| | ||||    
T  40709475 tattttatcttttgttatagaaacagc-ttataaataagcacttatatattaagtggttatgata-taagcacttaattaagttgtttatccatatagag 40709572  T
Q  255 cca 257  Q
    |||    
T  40709573 cca 40709575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 41241648 - 41241716
Alignment:
Q  164 ttttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaatta 234  Q
    ||||||||||  |||||| ||| ||||||| ||||||||||||  |||||||||| |||||||||||||||    
T  41241648 ttttgttatagaaatagc-ttaaacacaagtacttatatgatagacgcttatgct-ataagcacttaatta 41241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 44319950 - 44319862
Alignment:
Q  130 tagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||| |||||  |||||||||||||||| |||| |||||  |||||  |||||||  ||||||||||||||||| ||||||||||    
T  44319950 tagcttatatgaaaacagttcgactttattttatctttt-ttatagaaatagt-ttatacatgagcacttatatgataagtgcttatgcta 44319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 2838279 - 2838234
Alignment:
Q  128 tatagcttatataaaactattcgactttattttatattttgttata 173  Q
    ||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  2838279 tatagcttatagaaaacaatttgactttattttatattttattata 2838234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 19304489 - 19304456
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacaga 253  Q
    |||||||||||||||| |||||||||||||||||    
T  19304489 ataagcacttaattaatctgtttatccaaacaga 19304456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 29729040 - 29728991
Alignment:
Q  29 tgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    |||||||||||||||| |||||||||||| ||||||   |||||||||||    
T  29729040 tgtaaaaatcaattcttgaatcaaaagcttcaatttttaacttcaagtta 29728991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 54414897 - 54414837
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttat 244  Q
    ||||||| |||||||||||||||||||||||||    |||| |||||||||||| |||||||    
T  54414897 ttatacataagcacttatatgataagcgcttat-aacataaacacttaattaagttgtttat 54414837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 1048784 - 1048744
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||| |||||||| |||||| |||||||    
T  1048784 aataaatttgagtgtaagaatcaattatagaattaaaagct 1048744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 2206580 - 2206540
Alignment:
Q  22 atttgagtgtaaaaatcaattctagaatcaaaagctccaat 62  Q
    ||||||||||||||| ||||| |||||||||||||| ||||    
T  2206580 atttgagtgtaaaaaacaattatagaatcaaaagctacaat 2206540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 4191712 - 4191657
Alignment:
Q  157 ttttatattttgttataagaatagcattatacacaagcacttatatgataagcgctt 213  Q
    |||||| ||||||||||  |||||| ||||||| ||||||||||||||||| |||||    
T  4191712 ttttatcttttgttatagaaatagc-ttatacataagcacttatatgataaacgctt 4191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 19422398 - 19422335
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    ||||||||| ||| ||||||||||  |||| | ||||||| ||||| ||||||||||||||||||    
T  19422398 gactttattatatcttttgttatagaaataac-ttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 33843627 - 33843583
Alignment:
Q  83 ctagaatcagttttggtccctcaaaaagtgaaaccaaacatacac 127  Q
    ||||||||| |||||| ||||| | ||||||||||||||||||||    
T  33843627 ctagaatcaattttggaccctctagaagtgaaaccaaacatacac 33843583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 39063768 - 39063835
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| |||||||||||||||||| | ||||||  |||||| ||||| || ||||||||| ||||||    
T  39063768 ttatacataagcacttatatgataagtggttatgc-cataagcgcttaagtatgctgtttatacaaaca 39063835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 20982225 - 20982325
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||  |||||||||  |||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||    
T  20982225 gactttattttatcctttgttatagaaatagc-ttatacataagcacttatatgataagcacttatgct-ataagcacttaatgaagttgtttatccaaa 20982322  T
Q  250 cag 252  Q
    |||    
T  20982323 cag 20982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 26516275 - 26516180
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||||||| ||||||| ||  |||||| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagc-ttatacataagcacttatatgataagcgcttatgct-ataagcgcttaattaagttgtttatccaaac 26516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 24306111 - 24306173
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||  |||||||||    
T  24306111 aacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaagt 24306173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 24367205 - 24367143
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||  |||||||||    
T  24367205 aacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaagt 24367143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 14716592 - 14716661
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacaga 253  Q
    ||||||| |||||||||||||| ||   ||||||||| |||||||||||||||||||| ||||||||||||    
T  14716592 ttatacataagcacttatatgacaaatccttatgcta-taagcacttaattaagctgtatatccaaacaga 14716661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 23999104 - 23999043
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatc 245  Q
    ||||||||||||||||||||||||||| ||||| || ||||||| ||||||||| ||||||||    
T  23999104 ttatacacaagcacttatatgataagcccttattct-ataagcatttaattaagttgtttatc 23999043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 4991037 - 4991101
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||| |||| ||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||    
T  4991037 ttatgttatcttttgttataaaaatagc-ttatacacaaacacttatatgataatcgcttatgcta 4991101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 39257476 - 39257575
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||  ||||||||||   ||||||| ||||| ||||||||| |||||||  | |||||||| ||||| |||||||||| ||||||||||||    
T  39257476 gactttattttaccttttgttatagagatagcat-atacataagcacttacatgataatagtttatgcta-taagcgcttaattaagttgtttatccaaa 39257573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 31687965 - 31687906
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| ||||| |||||||||||    
T  31687965 aagcacttatatgataagcgcctatgct-ataagcatttaatttagctggttatccaaaca 31687906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 10391329 - 10391264
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaa 220  Q
    ||||||||| ||||||||||| |||||| ||||||  |||||||||||||||||| | |||||||||    
T  10391329 ttattttatcttttgttataaaaatagc-ttatacgtaagcacttatatgataagtgtttatgctaa 10391264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 10898792 - 10898729
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    |||||||||||||| ||||||||||||||  |||| |||| | |||||||||| ||||||||||||    
T  10898792 gaacaataaatttgtgtgtaaaaatcaat--tagattcaataactccaatttcttacttcaagtta 10898729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 11684398 - 11684345
Alignment:
Q  155 tattttatattttgttataagaatagcattatacacaagcacttatatgataagc 209  Q
    |||||||||||||||||||| |||||| |||||||  ||||||||||||||||||    
T  11684398 tattttatattttgttataaaaatagc-ttatacattagcacttatatgataagc 11684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 12241999 - 12242072
Alignment:
Q  182 attatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    |||||||| || |||||||||||||||| |||| ||||  || |||||||||||| |||||||||||||| ||||    
T  12241999 attatacataaccacttatatgataagcacttaagctag-aatcacttaattaagttgtttatccaaacatagcc 12242072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 29588856 - 29588761
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||||||||  |||||| ||||||| |||||||||||| | ||| | ||||||| |||||| ||||||| |  |||||||||||||||    
T  29588856 ttattttatattttgttatagaaatagc-ttatacataagcacttatataaaaagtgtttatgct-ataagcgcttaatt-atttgtttatccaaacag 29588761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 37063164 - 37063260
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    ||||||||||||| ||||||||||  |||||  ||||||| ||||| |||||||| ||||  ||||||| ||||| | || ||||||||||||||||||    
T  37063164 gactttattttatcttttgttatagaaatag-tttatacataagcatttatatgacaagcatttatgct-ataagtagttgattaagctgtttatccaa 37063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 6725173 - 6725117
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||| ||||||||| |||||||||||||||  | |||||||||||||    
T  6725173 acttatatgataagcacttatgcta-taagcacttaattaaattatttatccaaacag 6725117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 32172633 - 32172534
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||| ||||||| ||||||| ||  |||||  ||||||| |||| ||| |||||||||||||||||||  ||||| |||||||| | ||||||||||||    
T  32172633 gacttcattttatcttttgttgtagaaatagt-ttatacataagctcttgtatgataagcgcttatgct-gtaagcgcttaattatgttgtttatccaaa 32172536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 12521485 - 12521446
Alignment:
Q  212 ttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  12521485 ttatgctaa-aagcacttaattaagctgtttatccaaacag 12521446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 16945103 - 16945173
Alignment:
Q  183 ttatacacaagcacttata--tgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| |||||||||||  ||||||||  |||||||| ||| |||||||||| |||||||||||||||||    
T  16945103 ttatacataagcacttatacatgataagcttttatgcta-taaacacttaattaggctgtttatccaaacag 16945173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 35135729 - 35135820
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||||| ||| || || ||||||||||||| ||||||||||  |||| | ||||||| || |||||||||| ||||| |||||||||    
T  35135729 tatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatc-ttatacataaacacttatatgttaagcacttatgcta 35135820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 36640008 - 36639956
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||| |||||||||||||||||| |||||||||||| | ||||| |||||||    
T  36640008 gaacattaaatttgagtgtaaaaaacaattctagaattagaagctacaatttc 36639956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 38728315 - 38728249
Alignment:
Q  192 agcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccata 259  Q
    |||||| ||||||||||||| |||| || ||| || ||||||||||||| ||||||||||| ||||||    
T  38728315 agcactaatatgataagcgcatatgtta-taaacatttaattaagctgtgtatccaaacagggccata 38728249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 39823190 - 39823312
Alignment:
Q  130 tagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcact 228  Q
    |||||||||| ||| || || ||||||||||||| ||||||||||  ||||   | ||||| |||| ||| ||| | |||||||||||||  ||||| ||    
T  39823190 tagcttatatgaaagtagtttgactttattttatcttttgttatataaataatctgatacataagcccttctataacaagcgcttatgct-gtaagcgct 39823288  T
Q  229 taattaagctgtttatccaaacag 252  Q
    | |||||| |||||||||||||||    
T  39823289 tgattaagttgtttatccaaacag 39823312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 8472043 - 8471990
Alignment:
Q  197 ttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||||||||| ||||||||||| ||||| ||||||| | ||||||||||||||    
T  8472043 ttatatgataagtgcttatgctaa-aagcatttaattacgttgtttatccaaaca 8471990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 15874016 - 15874054
Alignment:
Q  27 agtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  15874016 agtgtaaaaagcaattctagaatcaaaagctacaatttc 15874054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 40336001 - 40336062
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacaga 253  Q
    |||||||||||||| | | ||| |||||| ||||||| |||||||| ||||||||||||||||    
T  40336001 aagcacttatatgacaggagctcatgcta-taagcacataattaagttgtttatccaaacaga 40336062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 3951565 - 3951498
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| |||||||||||||||||||  ||||||| |||| | |||||||||| | |||||||||||||    
T  3951565 ttatacataagcacttatatgataagcatttatgct-ataa-cgcttaattaagttatttatccaaacag 3951498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 11457071 - 11457003
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| || || || |||||||||| ||||||||| ||||| ||| ||||||||||||||||| ||||    
T  11457071 ttatacataaacatttgtatgataagcacttatgcta-taagcgcttgattaagctgtttatccagacag 11457003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 18637340 - 18637311
Alignment:
Q  28 gtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||||||||    
T  18637340 gtgtaaaaatcaattctagaatcaaaagct 18637311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 19113203 - 19113263
Alignment:
Q  146 attcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    ||||||| ||||||||| ||||||||||| |||||  ||||||| ||||| |||||||||||    
T  19113203 attcgacattattttattttttgttataaaaatag-tttatacataagcaattatatgataa 19113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 29115303 - 29115402
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||  ||||||| ||  |||||| ||||||| |||||||| ||||||||  | |||||||| ||||| | |||||||  ||||||||||||    
T  29115303 gactttattttaccttttgttgtagaaatagc-ttatacataagcacttttatgataaatgtttatgcta-taagcgcgtaattaaagtgtttatccaaa 29115400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 35095864 - 35095936
Alignment:
Q  141 aaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||| ||| ||||||||||||| ||||||||||  |||||  ||| | | ||||||||||||||||||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagt-ttaaatataagcacttatatgataagcgctta 35095936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 1550840 - 1550808
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||||| |||||||||||||||    
T  1550840 ataagcacttaattaagttgtttatccaaacag 1550808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 6938845 - 6938904
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||| ||||||||||||||| ||||||| ||||||   ||||||| |||||||||||||||    
T  6938845 aagcccttatatgataagcgtttatgct-ataagctgataattaaactgtttatccaaaca 6938904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 7026411 - 7026447
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacagagcc 256  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  7026411 ataagcacttaattaagttgtttatccaaatagagcc 7026447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 7097397 - 7097342
Alignment:
Q  196 cttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||  |||||||| ||||||  ||||||||||||||| ||||||||    
T  7097397 cttatatgataagcatttatgcta-taagcatataattaagctgtttagccaaacag 7097342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 12408255 - 12408223
Alignment:
Q  219 aataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||||| |||||||||||||||    
T  12408255 aataagcacttaattaaactgtttatccaaaca 12408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 19535488 - 19535456
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||| ||||||||||||||    
T  19535488 ataagcacttaattaagccgtttatccaaacag 19535456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 33961651 - 33961584
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| || ||||||||||||||| |||||| || |||| ||||||||||||  |||| ||||||||    
T  33961651 ttatacaaaaacacttatatgataagtgcttatact-ataaacacttaattaagtcgtttctccaaaca 33961584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 35963196 - 35963160
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||||||||||| |||||| |||||||||||    
T  35963196 ttatacacaagcacttatttgataatcgcttatgcta 35963160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 41052838 - 41052771
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| |||||| | | ||||||||| ||||||||  ||||||||||||||  ||||||||||||||    
T  41052838 ttatacataagcacctgtctgataagcgtttatgctac-aagcacttaattaaattgtttatccaaaca 41052771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 42857952 - 42857896
Alignment:
Q  22 atttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    |||||| || |||||||||||||| ||||| |||||| ||||||  |||||||||||    
T  42857952 atttgactgcaaaaatcaattctataatcagaagctctaatttctaacttcaagtta 42857896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 42858179 - 42858131
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaa 61  Q
    |||| ||||||||| |||| |||||||||| |||||| |||||||||||    
T  42858179 gaactataaatttgtgtgtgaaaatcaattatagaattaaaagctccaa 42858131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 31341192 - 31341074
Alignment:
Q  133 cttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaa 231  Q
    |||||||||||| | || ||||||||||||| ||||||||||  |||||| ||||||| ||||| ||| ||||||||||||||||| ||||||| ||| |    
T  31341192 cttatataaaaccagtttgactttattttatcttttgttatacaaatagc-ttatacataagcatttagatgataagcgcttatgc-aataagcgcttga 31341095  T
Q  232 ttaagctgtttatccaaacag 252  Q
    ||||| |||||||||||||||    
T  31341094 ttaagttgtttatccaaacag 31341074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 254
Target Start/End: Complemental strand, 49060543 - 49060418
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||||||| || || ||||||||||||| ||||||||||  |||||| ||||||| ||  |||||||||||||||  |||| ||| ||||      
T  49060543 tatagcttatataaaaataatttgactttattttattttttgttatagaaatagc-ttatacataaatacttatatgataagccattatacta-taagtg 49060446  T
Q  227 cttaattaagctgtttatccaaacagag 254  Q
    ||||||||||||||||| ||||||||||    
T  49060445 cttaattaagctgtttacccaaacagag 49060418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 753294 - 753400
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||| |||||||||||||  |||||  | |||||||||| ||||||||||||  | |||||||| ||| |||||||||||| ||||||||||||    
T  753294 gactttatttcatattttgttatagaaatagtgt-atacacaagcgcttatatgataaatgtttatgcta-taaacacttaattaagttgtttatccaaa 753391  T
Q  250 cagagccat 258  Q
    |||| ||||    
T  753392 cagaaccat 753400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27571929 - 27571870
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  27571929 aataaacttgagtgttaaaatcaattctagaatcaaaagctccaatttctaacttcaagt 27571870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 30134029 - 30133932
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||||| ||| |||||| ||||||| || |||||||  ||||||||||||||||| |||||| |||||| || ||||||||||||    
T  30134029 gactttattttatcttttgttgtaaaaatagc-ttatacataaacacttat--gataagcgcttatgcta-taagcatttaattgagttgtttatccaaa 30133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 30182311 - 30182361
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30182311 aacaataaatttgagtgtaaaaattaattctagaatcaaaagctacaattt 30182361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 7100709 - 7100807
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||| |||||| ||||||||||| |||||| |   ||||||| ||||||||||||| ||||||| || ||||||| |||||||||  |||||||||||    
T  7100709 gacttttttttatcttttgttataaaaatagctt---acacaagtacttatatgataaacgcttatact-ataagcatttaattaagtagtttatccaaa 7100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 2012764 - 2012826
Alignment:
Q  193 gcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    |||||| |||||||||| | ||||||| |||||||||||||||||| |||||||||||||||||    
T  2012764 gcacttgtatgataagcacctatgcta-taagcacttaattaagctttttatccaaacagagcc 2012826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 8445264 - 8445183
Alignment:
Q  152 ctttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaa 235  Q
    ||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||| | || ||||| ||| ||||||||||||    
T  8445264 ctttattttatcttttgttataaaaatagc-ttataaacaagcacttatatgataaacactaatgct-atacgcacttaattaa 8445183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 38123683 - 38123732
Alignment:
Q  16 caataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  38123683 caataaatttgagtgtaaaaatcaattctagaattagaagctacaatttc 38123732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 45593809 - 45593906
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| |||||||| |  |||||| ||||||| ||||| ||||||||||| | ||||  |  ||||||||||||||||||| ||||||||||    
T  45593809 gactttattttatgttttgttacagaaatagc-ttatacataagcatttatatgataaactcttacac--ataagcacttaattaagctatttatccaaa 45593905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 46213786 - 46213728
Alignment:
Q  147 ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgata 206  Q
    |||||||||||||||||||||||||||  |||||| || |||| ||||||||||||||||    
T  46213786 ttcgactttattttatattttgttatagaaatagc-ttttacataagcacttatatgata 46213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 657806 - 657874
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| || ||||| |||||||| | |||||| | ||||||||||||||||| |||||||||||||||    
T  657806 ttatacagaaacacttctatgataatcacttatg-tgataagcacttaattaagttgtttatccaaacag 657874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 5630049 - 5630109
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    ||||||||||||| | ||||| ||| |||| ||||||||||| |||||||||||||||||||    
T  5630049 acttatatgataaacacttattcta-taaggacttaattaagttgtttatccaaacagagcc 5630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 22388001 - 22388092
Alignment:
Q  157 ttttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||| ||||||||||  |||||| |||| || ||||||||| |||||||| | ||||| || ||||| |||||||||| |||||||||||||    
T  22388001 ttttatcttttgttatagaaatagc-ttatccataagcacttaaatgataagtgtttatgtta-taagcgcttaattaagttgtttatccaaac 22388092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 28844434 - 28844366
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| |||||||||||  ||||||||||||||| |||| |||||||||||| ||| |||||| ||||    
T  28844434 ttatacataagcacttatacaataagcgcttatgct-ataaacacttaattaagttgtatatccagacag 28844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 30751497 - 30751441
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    |||||||||||||||||||||| || |||||  |||| ||||||||||||||||||||    
T  30751497 gactttattttatattttgttacaaaaatag-tttattcacaagcacttatatgataa 30751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 5373205 - 5373142
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    ||||||||||||| ||||||||||  ||||||| |||||| ||||||||| ||||||||| ||||    
T  5373205 gactttattttatcttttgttatagaaatagca-tatacataagcacttacatgataagcactta 5373142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 12306784 - 12306748
Alignment:
Q  21 aatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12306784 aatttgagtgtaaaaatcaattctaaaatcaaaagct 12306748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 18749880 - 18749995
Alignment:
Q  131 agcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcactt 229  Q
    ||||||||||||| || || ||||||| ||||| ||||||||||  ||| |  || |||||||| |||||||||||||| ||||||||| |||||||  |    
T  18749880 agcttatataaaaatagtttgactttactttatcttttgttatagaaatgggttt-tacacaagtacttatatgataagagcttatgct-ataagca--t 18749975  T
Q  230 aattaagctgtttatccaaa 249  Q
    ||||| ||||| ||||||||    
T  18749976 aattacgctgtgtatccaaa 18749995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 45078259 - 45078204
Alignment:
Q  164 ttttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaa 220  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||| || |||||||||    
T  45078259 ttttgttataaaaatagc-ttatacataagcacttatatgataaacgtttatgctaa 45078204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 245
Target Start/End: Complemental strand, 5939064 - 5938971
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatc 245  Q
    |||||||||| || ||||||||||| |||| | ||||||| || ||||||| | |||| ||||| ||| ||||||| |||||||||| ||||||||    
T  5939064 gactttatttaattttttgttataaaaataac-ttatacataaacacttatgtaataatcgcttctgc-aataagcgcttaattaagttgtttatc 5938971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 24975906 - 24975816
Alignment:
Q  129 atagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||||||||  | |||| ||||||||||| ||||||||||  | ||| ||||||||  |||||||||||||||||| | |||||||    
T  24975906 atagcttatataaaaacagttcgcctttattttatcttttgttatagaagtag-attatacatcagcacttatatgataagcacatatgcta 24975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 26935644 - 26935733
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatc 245  Q
    |||||||||  |||||||||| |||||| ||| ||| ||||||||||||||||| | |||||| | |||||| ||||||||| | |||||||    
T  26935644 ttattttatcatttgttataaaaatagc-ttacacaaaagcacttatatgataatctcttatggt-ataagcgcttaattaaccggtttatc 26935733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 27481399 - 27481484
Alignment:
Q  165 tttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||  |||||| ||||||| || ||||||||| |||| |  |||||||| ||||||| |||||||| |||||||||||||||    
T  27481399 tttgttatagaaatagc-ttatacataaacacttatataataaacatttatgcta-taagcacctaattaagttgtttatccaaacag 27481484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 253
Target Start/End: Original strand, 12835004 - 12835128
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    ||||||| |||| ||||| ||| ||||||||||||| ||||||| ||  ||||||||  | || ||||||| ||| | |||||| ||||| || |||||     
T  12835004 tatagctaatatgaaaacaatttgactttattttatcttttgttgtagaaatagcatc-tgcataagcactcatacgctaagcgtttatgtta-taagcg 12835101  T
Q  227 cttaattaagctgtttatccaaacaga 253  Q
    |||||| ||| ||||||||||||||||    
T  12835102 cttaatcaagttgtttatccaaacaga 12835128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 40491643 - 40491605
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  40491643 taaatttgtgtgtaaaagtcaattctagaatcaaaagct 40491605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 46281333 - 46281390
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||| ||||| ||||||| ||||||| |||||| || ||||||||||||    
T  46281333 aagcacttatatgaaaagcggttatgct-ataagcagttaattgagttgtttatccaaa 46281390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 5620224 - 5620284
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||| ||| || |||| |||| |||| ||||||||||| |||||||||||||||    
T  5620224 aagcacttatataatatgcacttaggcta-taagaacttaattaagttgtttatccaaacag 5620284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 30496694 - 30496622
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctt 213  Q
    ||||| ||| ||||||||||||||||||||||||  |||||  ||||||| || ||||||| ||||| ||||||    
T  30496694 aaaacaatttgactttattttatattttgttatagaaatag-tttatacataaacacttatgtgatatgcgctt 30496622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 35536110 - 35536026
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgct 212  Q
    |||| ||||||| ||||| ||| ||||||||||||| || |||||||  |||||| ||||||| ||||  ||||||||||||||||    
T  35536110 tataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagc-ttatacataagcctttatatgataagcgct 35536026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 2030629 - 2030566
Alignment:
Q  193 gcacttatatgataagcgcttatgctaataagcacttaattaagc-tgtttatccaaacagagcc 256  Q
    |||||| |||||||||| | ||||||| ||||||||||||||||| | |||||||||| ||||||    
T  2030629 gcacttgtatgataagcacctatgcta-taagcacttaattaagcttttttatccaaatagagcc 2030566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 5276204 - 5276141
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||||||| |||| ||||||||||| |||||| ||||||| ||||||||| | ||||| ||||||    
T  5276204 gactttatgttatcttttgttataaaaatagc-ttatacataagcacttaaacgataaacgctta 5276141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 28340554 - 28340586
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||||||||| |||||||||||    
T  28340554 ataagcacttaattaagctgtatatccaaacag 28340586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 29574691 - 29574754
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||||||||| || |||||| |||| |||||| ||||||| ||||| ||||||||||| ||||||    
T  29574691 gactttatttcatcttttgtcataaaaatagc-ttatacataagcatttatatgataaacgctta 29574754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 46609249 - 46609277
Alignment:
Q  225 cacttaattaagctgtttatccaaacaga 253  Q
    |||||||||||||||||||||||||||||    
T  46609249 cacttaattaagctgtttatccaaacaga 46609277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 17420206 - 17420084
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| |||| | |||||||||||||||| |||| |||||| |||||  ||||||| ||| |||||| || ||||||||||| ||| ||| ||    
T  17420206 tatagcttatatgaaaattgttcgactttattttatcttttcttataaaaatagt-ttatacataagtacttatgtgctaagcgcttatacta-taatca 17420109  T
Q  227 cttaattaagctgtttatccaaaca 251  Q
    |||||||||||||||||||||||||    
T  17420108 cttaattaagctgtttatccaaaca 17420084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 10324944 - 10325004
Alignment:
Q  5 agtgagaagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||| | ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  10324944 agtgagtataacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttc 10325004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 17284167 - 17284119
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaa 61  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  17284167 gaacaataaatttgagtgtaaaaatcaattttagaatcaaaagttccaa 17284119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 49557120 - 49557026
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatcca 247  Q
    |||||||||||| ||||||||||  |||| | |||||||  ||||||||||||||||| | ||| | || |||||||||||||||||||||||||||    
T  49557120 actttattttatcttttgttatagaaataac-ttatacagcagcacttatatgataagtgattacgtta-taagcacttaattaagctgtttatcca 49557026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 39395959 - 39395908
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  39395959 gaacaataaatttgagtgtaaaaattaattctagaataaaaaactccaattt 39395908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 48282114 - 48282013
Alignment:
Q  150 gactttattttatattt-tgttataagaatagcattatacacaagcacttatatgataagcgc-ttatgctaataagcacttaattaagctgtttatcca 247  Q
    ||||||||||||| ||| | |||||  |||||| || |||| ||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  48282114 gactttattttatctttcttttatagaaatagcttt-tacataagcacttatatgataagcgcattaagc-aataagcacttaattaagctttttatcca 48282017  T
Q  248 aaca 251  Q
    ||||    
T  48282016 aaca 48282013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 871025 - 870962
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    ||||| ||||||| ||||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  871025 gacttaattttatcttttgttataaaaatagt-ttatacataagcacttatatgataagcgctta 870962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 28287350 - 28287394
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  28287350 gaacaataaatttgagtgttaaaatcaattctaaaatcaaaagct 28287394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29759676 - 29759632
Alignment:
Q  20 aaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  29759676 aaatttgagtgtaaaaatcaattatagaatcagaagctccaattt 29759632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 33693083 - 33693027
Alignment:
Q  22 atttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    ||||||||||||||||||||| |||||||||||||| |||||||   ||||||||||    
T  33693083 atttgagtgtaaaaatcaattatagaatcaaaagctacaatttctagcttcaagtta 33693027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 213551 - 213594
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagc 56  Q
    |||||| |||||||||| ||||||||||||||||||||||||||    
T  213551 gaacaacaaatttgagtttaaaaatcaattctagaatcaaaagc 213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 3515884 - 3515837
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  3515884 ataattttgagtgtaaaaatcaattctagaatgaaaagctacaatttc 3515837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 7274019 - 7274097
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||| ||| |||||||||| || ||||||||||| |||| ||| ||||| ||||| ||||||||||||| |||||||||    
T  7274019 aaaacaatttgactttatttcatcttttgttataaaaataacat-atacataagcatttatatgataagcacttatgcta 7274097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 29794016 - 29794109
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||| |||||||| || |||||| | ||||| || ||| ||||||| || | ||||||||| ||||| |||||||||||||||||||||||    
T  29794016 ttattttatcttttgttacaaaaatagcct-atacataaacacatatatgaaaaacacttatgcta-taagcgcttaattaagctgtttatccaaa 29794109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 252
Target Start/End: Original strand, 48133071 - 48133129
Alignment:
Q  193 gcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||| |||||||||||    
T  48133071 gcacttatatgataagcgtttatgct-ataagcgcttaattaagttgtctatccaaacag 48133129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 52013491 - 52013530
Alignment:
Q  12 agaacaataaatttgagtgtaaaaatcaattctagaatca 51  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  52013491 agaacagtaaatttgagtgtaaaaatcaattctagaatca 52013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 4200232 - 4200128
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| ||||| | | ||||||||||||| ||||||||||| |||| | ||||| | || |||||| |||||||| ||||||||| ||| |||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttgttataaaaataac-ttatatataaacacttagatgataagtgcttatgct-atacgca 4200135  T
Q  227 cttaatt 233  Q
    |||||||    
T  4200134 cttaatt 4200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 24263261 - 24263326
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||| || |||||||||| ||| || |||||||| ||||||||||||||| |||||||||||||    
T  24263261 ttatacataaacacttatatgctaaacgtttatgcta-taagcacttaattaaactgtttatccaaa 24263326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 49173353 - 49173292
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatc 245  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||||| |||||||| ||||||||    
T  49173353 ttatagacaagcacttatatgagaagtgcttatgct-ataagcacataattaagttgtttatc 49173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 49517073 - 49516949
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagc-acttatatgataagcgcttatgctaataagc 225  Q
    ||||||||| || ||||| ||| ||||||||||||| ||||||||||  |||| | |||||||||| | | ||||||||||| |||||||| |  |||||    
T  49517073 tatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataac-ttatacacaaacaatttatatgataaacgcttatg-ttttaagc 49516976  T
Q  226 acttaattaagctgtttatccaaacag 252  Q
    ||||||||||| |||| || |||||||    
T  49516975 acttaattaagttgttcattcaaacag 49516949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 44236622 - 44236717
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    ||||||||||||  ||||||||| ||||||| || ||||||| ||||||| |||||||| |||||||| |||||  |||||||||  ||||| |||||    
T  44236622 actttattttatcatttgttataggaatagc-ttctacacaaacacttatgtgataagcacttatgct-ataagtgcttaattaacttgtttgtccaa 44236717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 49365918 - 49365982
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    |||||||||||| |||| || |||||||| ||||| ||||| |||| |||||||||||||||||||    
T  49365918 aagcacttatattataaacgtttatgcta-taagcgcttaactaagttgtttatccaaacagagcc 49365982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 7524184 - 7524140
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||    
T  7524184 gaactataaatttgtgtgtaaaaatcaattctataatcaaaagct 7524140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 11049321 - 11049277
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  11049321 gaactataaatttgtgtgtaaaaatcaattttagaatcaaaagct 11049277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 46504313 - 46504387
Alignment:
Q  156 attttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaat 232  Q
    ||||||| ||||||||||| |||||  ||||| |||| ||||||||||||||| ||||||||| |||| ||||||||    
T  46504313 attttatcttttgttataaaaatagt-ttatagacaaacacttatatgataagagcttatgct-ataaacacttaat 46504387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 47892402 - 47892454
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||  ||| ||||| ||||||||||||||||||||||||| |||||||    
T  47892402 gaacaatatgttttagtgttaaaatcaattctagaatcaaaagcttcaatttc 47892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 20720882 - 20720835
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  20720882 ataaatttgattgtaaaaatcaattctagaatcataagttacaatttc 20720835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 49560680 - 49560750
Alignment:
Q  182 attatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacaga 253  Q
    |||||| | ||||||||||||||| || || ||||||| ||| ||||||| |||| ||||||||||||||||    
T  49560680 attatatataagcacttatatgattagtgcatatgcta-taaacacttaagtaagttgtttatccaaacaga 49560750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 4458641 - 4458595
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||| | ||| ||||| |||||||||||||||||||||||    
T  4458641 taaatttgagttttaaattcaatactagaatcaaaagctccaatttc 4458595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 6031573 - 6031663
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    ||||||||||||||||||||  || ||| ||||||| ||||| |||||||||| |  ||||||||| |||||| |||||| ||||||||||||||    
T  6031573 ttattttatattttgttatagtaacagc-ttataca-aagcagttatatgata-gtacttatgcta-taagcatttaattgagctgtttatccaa 6031663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 34387712 - 34387770
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    ||||||||| |||| |||||||||| |||||||||||||| ||||| |  |||||||||    
T  34387712 ataaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagt 34387770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 52542504 - 52542447
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||||| | ||||||||| || ||| |||||||||| ||||||||||||    
T  52542504 aagcacttatatgatacgtgcttatgct-atcagcgcttaattaagttgtttatccaaa 52542447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 7790656 - 7790693
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatc 50  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  7790656 gaacaataaatttgtgtgtaaaaatcaattatagaatc 7790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 15084624 - 15084653
Alignment:
Q  28 gtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||||||||    
T  15084624 gtgtaaaaatcaattctagaatcaaaagct 15084653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 17628334 - 17628266
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||||||| || ||||| |||| ||||||  |||| |||  |||||||||||||||    
T  17628334 ttatacacaagcacttatatgacaaacgcttgtgct-ataagcgattaactaaattgtttatccaaacag 17628266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 23895313 - 23895249
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgct 218  Q
    |||||||||| ||||||||||  |||||| ||||||| ||  |||||||||||||| |||||||||    
T  23895313 tttattttatcttttgttatagaaatagc-ttatacataataacttatatgataagggcttatgct 23895249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 30237879 - 30237935
Alignment:
Q  194 cacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||| ||||| |||||||||| ||  |||||||||||| ||||||||||||||    
T  30237879 cacttatataataagtgcttatgcta-tagacacttaattaagttgtttatccaaaca 30237935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 42336642 - 42336570
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataa 223  Q
    ||||||||||||| ||||||||||| |||| |  |||||| ||||||| ||||||| |||| ||| ||||||||    
T  42336642 gactttattttattttttgttataaaaataac-ctatacataagcactaatatgatgagcgtttacgctaataa 42336570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 48549028 - 48549078
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||||  |||| ||||||||||||||||||||| ||||| |||||||    
T  48549028 gaacaataaat--gagtttaaaaatcaattctagaatcagaagctacaatttc 48549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 51500863 - 51500892
Alignment:
Q  28 gtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||||||||    
T  51500863 gtgtaaaaatcaattctagaatcaaaagct 51500892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1514414 - 1514370
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||||||| ||||||||||||||| || ||| |||||||    
T  1514414 gaacaataaatttgtgtgtaaaaatcaattatataataaaaagct 1514370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6021875 - 6021831
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||| ||||||||||||||| ||| ||||||||||||||    
T  6021875 gaaccataaacttgagtgtaaaaatctattatagaatcaaaagct 6021831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20026178 - 20026222
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||||||||||||  |||||||||||||| | |||||||    
T  20026178 gaacaataaatttgagtgttcaaatcaattctagagttaaaagct 20026222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 24587979 - 24587932
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattct--agaatcaaaagctccaat 62  Q
    ||||||||||||||| |||||||||| |  ||||||||||||||||||    
T  24587979 aataaatttgagtgttaaaatcaattatagagaatcaaaagctccaat 24587932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 24857636 - 24857703
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| || |||||||||||| || ||||||| ||  |||||||||||||||||||  |||||||||    
T  24857636 ttatacataaacacttatatgattagtgcttatgatac-aagcacttaattaagctgtgcatccaaaca 24857703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 24967960 - 24967928
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||| ||||||||||||||    
T  24967960 ataagcacttaattaagccgtttatccaaacag 24967928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 43018534 - 43018494
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaa 54  Q
    |||||||||||||||| |||| |||||||||||||| ||||    
T  43018534 aacaataaatttgagtctaaacatcaattctagaattaaaa 43018494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 47598564 - 47598592
Alignment:
Q  220 ataagcacttaattaagctgtttatccaa 248  Q
    |||||||||||||||||||||||||||||    
T  47598564 ataagcacttaattaagctgtttatccaa 47598592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 1164 - 1266
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||||||||  |||||| ||||||| ||||||||||||||||  || |||||||| |||| ||||||||||| |||||||||| |    
T  1164 gactttattttatcttttgttatagaaatagc-ttatacataagcacttatatgatagacgtttatgcta-taagtacttaattaagttgtttatccaca 1261  T
Q  250 cagag 254  Q
    |||||    
T  1262 cagag 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 2811 - 2709
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||||||||  |||||| ||||||| ||||||||||||||||  || |||||||| |||| ||||||||||| |||||||||| |    
T  2811 gactttattttatcttttgttatagaaatagc-ttatacataagcacttatatgatagacgtttatgcta-taagtacttaattaagttgtttatccaca 2714  T
Q  250 cagag 254  Q
    |||||    
T  2713 cagag 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 14482192 - 14482078
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctg 239  Q
    ||||| ||| ||||||||||||| ||||||||||  |||||  ||||||| ||||||||||||||||||| || ||||| ||||| ||||||||||  ||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagt-ttatacataagcacttatatgataagcactaatgct-ataagaacttaattaaattg 14482095  T
Q  240 tttatccaaacagagcc 256  Q
    ||||| |||||||||||    
T  14482094 tttattcaaacagagcc 14482078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 28769429 - 28769529
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||| |||||||| ||||||||| ||||||| ||||||| ||||| ||||||||||||| |||||||| ||||   ||| ||| |||||||||||||||    
T  28769429 gacttaattttatagtttgttataggaatagc-ttatacataagcatttatatgataagcacttatgct-ataaatgcttgatttagctgtttatccaaa 28769526  T
Q  250 cag 252  Q
    |||    
T  28769527 cag 28769529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 31884597 - 31884477
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| ||||| |||| | || ||||||||||||||||||  |||| | ||||||| | |||||| ||||||||||||||||||| |||||      
T  31884597 tatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataac-ttatacatatgcacttgtatgataagcgcttatgct-ataagtg 31884500  T
Q  227 cttaattaagctgtttatccaaa 249  Q
    ||||||| || ||||||||||||    
T  31884499 cttaattgagttgtttatccaaa 31884477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 35869840 - 35869718
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| |||| | || || |||||||||||||||||| ||  ||| || ||||||| ||| |||||||||||||| ||||||||| ||||||     
T  35869840 tatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgc-ttatacataagaacttatatgataagtgcttatgct-ataagcg 35869743  T
Q  227 cttaattaagctgtttatccaaaca 251  Q
    |||||| ||| ||| ||||||||||    
T  35869742 cttaataaagttgtgtatccaaaca 35869718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 41336725 - 41336834
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctg 239  Q
    ||||| ||| |||| |||||||| |||||| |||| ||| |  ||||||| ||||| |||| |||||| ||||||||||| |||||| ||||||||| ||    
T  41336725 aaaacaatttgactatattttatcttttgtcataaaaat-gatttatacataagcatttatttgataaacgcttatgcta-taagcaattaattaagttg 41336822  T
Q  240 tttatccaaaca 251  Q
    ||||||||||||    
T  41336823 tttatccaaaca 41336834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 10722597 - 10722514
Alignment:
Q  165 tttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||  ||||  ||||||||||||||||||||||||| | | |||||||  ||||| |||||||||| ||||||||||||    
T  10722597 tttgttatataaataagattatacacaagcacttatatgatatgtgtttatgct-ttaagcgcttaattaagttgtttatccaaa 10722514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 3645884 - 3645974
Alignment:
Q  129 atagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||||||||| ||| || || || ||| ||||||||||| |||||  |||||| ||||||||||||||||||||||||| | |||||||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatattttcttatagaaatagc-ttatacacaagcacttatatgataaacacttatgcta 3645974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 6918992 - 6918915
Alignment:
Q  169 ttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    |||||| |||||| ||||||| ||||||||||||||||| | |||||||| |||  ||||||| ||||||||||||||||    
T  6918992 ttataaaaatagc-ttatacataagcacttatatgataaacacttatgct-atagacacttaagtaagctgtttatccaa 6918915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 6950271 - 6950217
Alignment:
Q  196 cttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  6950271 cttatatgataagcgtttatgcta-taagcacttaattaagttgtttatctaaaca 6950217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 8536150 - 8536238
Alignment:
Q  162 tattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||  |||||| ||||||| |||||||||||||| ||||  | ||| || |||||||| ||||||| |||||||||||||||    
T  8536150 tattttgttatagaaatagc-ttatacataagcacttatatgacaagcattcatggta-taagcactcaattaagttgtttatccaaacag 8536238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 12972804 - 12972739
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||| |||||||||||||||||  ||||||||| |||||| |||||||||| ||||| ||||||    
T  12972804 ttatacataagcacttatatgataaatgcttatgct-ataagcgcttaattaagttgtttgtccaaa 12972739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 35453689 - 35453805
Alignment:
Q  127 ctatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagc 225  Q
    ||||| ||||||| |||||| ||  |||||||||||| ||||||| ||  || || |||||| | ||| |||||||||| ||||||||||||| |||| |    
T  35453689 ctataacttatatgaaactagtttaactttattttatcttttgttgtagaaacag-attatatataagtacttatatgacaagcgcttatgct-ataatc 35453786  T
Q  226 acttaattaagctgtttat 244  Q
    ||||||||||| |||||||    
T  35453787 acttaattaagttgtttat 35453805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 4336639 - 4336684
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctc 58  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  4336639 gaacaataaatttgagtgtaaaaattaattctaaaataaaaagctc 4336684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 7026710 - 7026611
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||||||||| ||||||||||| | |||| |||| || |||||||||||||||||  | |||||||  |||   |||||||||| |||||||||||||    
T  7026710 actttattttatcttttgttataacagtagc-ttatgcataagcacttatatgataaatgtttatgct-gtaaatgcttaattaagttgtttatccaaac 7026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 252
Target Start/End: Original strand, 31875689 - 31875749
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||||||||||||| |||| | ||| |||||| ||| |||||||||||    
T  31875689 aagcacttatatgataagcgcttatgct-ataaacgcttcattaagttgtctatccaaacag 31875749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 4558777 - 4558679
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||||||||| |||| |||||  |||||| ||||||| || |||||| || |||| || |||||||| ||||| | |||||||| |||||||||||||    
T  4558777 actttattttatcttttattatagaaatagc-ttatacataaacacttacataataaacgtttatgcta-taagcgcgtaattaagttgtttatccaaac 4558680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 13384668 - 13384712
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||    
T  13384668 gaactataaatttgtgtgtgaaaatcaattctagaatcaaaagct 13384712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26100160 - 26100204
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||    
T  26100160 gaaccataaatttgtgtgtaaaaatcaattatagaatcaaaagct 26100204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 27754556 - 27754627
Alignment:
Q  184 tatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    |||||| ||||||||| |||||||||| |||| ||| ||| |||||||||||| || ||| ||||||||||||    
T  27754556 tatacataagcacttaaatgataagcgtttatacta-taaacacttaattaagttgcttacccaaacagagcc 27754627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 29592644 - 29592726
Alignment:
Q  172 taagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagcc 256  Q
    |||||||||| ||||||| ||||||||||||||||||  |||||||| ||||   | ||| |||| |||||||||||||||||||    
T  29592644 taagaatagc-ttatacaaaagcacttatatgataagaacttatgct-ataaatgcataactaagttgtttatccaaacagagcc 29592726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 4554399 - 4554344
Alignment:
Q  20 aaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaag 75  Q
    |||||||||| |||||||||||| ||| ||||||||||| |||||| | |||||||    
T  4554399 aaatttgagtataaaaatcaattttagtatcaaaagctcaaatttcttgcttcaag 4554344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 13418833 - 13418896
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    |||| |||||||||| ||| |||||||||| | |||||||||||||| ||||| ||||| ||||    
T  13418833 gaacgataaatttgaatgttaaaatcaattatggaatcaaaagctccgatttcttactttaagt 13418896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 2107448 - 2107513
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||| ||| ||||||||||||||||| || ||| |||| | |||||||||| ||||||||||||    
T  2107448 ttatacataagaacttatatgataagcgcataagct-ataaacgcttaattaagttgtttatccaaa 2107513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Original strand, 2364563 - 2364663
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||| ||||| ||||||  |||||| ||  | ||||||||||| | |||||||| |||||| ||||| || | ||||||||||||    
T  2364563 gactttattttatcttttgctataaaaatagc-gtatacataaatagttatatgataaacacttatgct-ataagcgcttaactatgttgtttatccaaa 2364660  T
Q  250 cag 252  Q
    |||    
T  2364661 cag 2364663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 12496614 - 12496561
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||||| | |||||| ||| ||||||||||||||| |||||||||    
T  12496614 acttatatgataagcgttaatgcta-taaacacttaattaagctggttatccaaa 12496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 14929299 - 14929376
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataat 261  Q
    ||||||| ||| |||||||||||||||||||||| |   ||||| |||||| | ||||||||||||| |||||| ||||    
T  14929299 ttatacataagtacttatatgataagcgcttatgat-tcaagcaattaattgaactgtttatccaaatagagccttaat 14929376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 34478208 - 34478250
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaag 55  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||    
T  34478208 gaacaataaatttgagtataaaaatgaattctaaaatcaaaag 34478250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 35220823 - 35220888
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||| ||||||||||||||||| | ||||| ||  |||| | ||||||||||||||||||||||    
T  35220823 ttatacataagcacttatatgataatcacttatcctg-taagtatttaattaagctgtttatccaaa 35220888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 35495331 - 35495293
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatca 51  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  35495331 gaacaataaatttgagtataaaaatcaattatagaatca 35495293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 39648163 - 39648193
Alignment:
Q  21 aatttgagtgtaaaaatcaattctagaatca 51  Q
    |||||||||||||||||||||||||||||||    
T  39648163 aatttgagtgtaaaaatcaattctagaatca 39648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 7008560 - 7008512
Alignment:
Q  200 tatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||||||||||    
T  7008560 tatgataaacgcttatgcta-taagcgcttaattaagttgtttatccaaa 7008512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 26499646 - 26499594
Alignment:
Q  198 tatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||    
T  26499646 tatatgataagcgcttatgttt-taagcacttaattaagttgtttattcaaaca 26499594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 33713242 - 33713279
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatca 51  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  33713242 aacaataaatttgagtttaaaaatcaattcaagaatca 33713279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 34788517 - 34788581
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttat 215  Q
    ||||||||||||| ||| || |||| |||||| ||||||  ||||| |||||||||||||||||||    
T  34788517 gactttattttatctttggtcataaaaatagc-ttatacgtaagcatttatatgataagcgcttat 34788581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 39392751 - 39392819
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||||||||||| ||||||||||  |||||  ||||||| |  |||||||||||||||| |||||||||    
T  39392751 gactttattttatcttttgttatagaaatagt-ttatacatagccacttatatgataagcacttatgcta 39392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 4662917 - 4662961
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||| ||||| ||||||||||||||||||||| ||||||||    
T  4662917 gaactatacatttgtgtgtaaaaatcaattctagaaacaaaagct 4662961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32767458 - 32767414
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||| ||||||||| ||| |||| ||||||||||||    
T  32767458 gaacaataaatttaagtgtaaaagtcagttctcgaatcaaaagct 32767414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32927963 - 32927919
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| |||||||||| ||||||| |||||||||||    
T  32927963 gaactataaatttgtgtgtaaaaatgaattctataatcaaaagct 32927919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35495061 - 35495017
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||| ||||| ||||||||| ||||||||||||||||||||    
T  35495061 gaactatagatttgtgtgtaaaaaacaattctagaatcaaaagct 35495017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 1485160 - 1485212
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1485160 gaacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttc 1485212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 33068655 - 33068751
Alignment:
Q  154 ttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||| ||||||||||  |||| | ||||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  33068655 ttattttatcttttgttatagaaataac-ttatacataagcatttatttgataagcgcttatgct-ataaacacttaattaagctgttcatccaaacag 33068751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 30926792 - 30926857
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||   ||||||||||    
T  30926792 gaacaataaatttgagtgtaaaaatcaattctagaataaaaaactccaatttctagcttcaagtta 30926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 31305864 - 31305912
Alignment:
Q  16 caataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31305864 caataaatttgagtgtataaatcaattctagaatcaaaagctccaattt 31305912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 32975958 - 32975858
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||||||||||| |  |||| | ||||||| || ||||||||||| ||||||||||||| |||| | |||||||||| |||||||| |||    
T  32975958 gactttattttatattttgttacagaaataac-ttatacataaacacttatatgagaagcgcttatgct-ataaacgcttaattaagttgtttatctaaa 32975861  T
Q  250 cag 252  Q
    |||    
T  32975860 cag 32975858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 2206592 - 2206461
Alignment:
Q  129 atagcttatataaaa-ctattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcac 227  Q
    ||||||||||||||| | |||  |||||||||||| ||||||||||| |||| | ||||||| ||   |||||| |||||| |||||||||| |||||||    
T  2206592 atagcttatataaaaacaattatactttattttatcttttgttataaaaataac-ttatacagaaatgcttatacgataagagcttatgcta-taagcac 2206495  T
Q  228 ttaattaagctgtttatccaaacagagccataat 261  Q
    |||||||||  |||||||||| ||| | ||||||    
T  2206494 ttaattaagaagtttatccaagcagggtcataat 2206461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 9505841 - 9505776
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagtta 78  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||||||||   ||||||||||    
T  9505841 gaacaataaatttgagtttaaaaatcaatcatagaatcaaaagctccaatttctatcttcaagtta 9505776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34027422 - 34027475
Alignment:
Q  4 gagtgagaagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  34027422 gagtgagttgaataataaatttgagtgtaaaaatcaattctagaatcaaaagct 34027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 4247214 - 4247271
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||    
T  4247214 aagcacttatatgataagtacttatgcta-taagcacttaattaagttgtttatccaaa 4247271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 7714025 - 7713906
Alignment:
Q  131 agcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcactt 229  Q
    ||||||||| ||||| ||| ||||||||||||| ||||||||| | | |||  ||||||| |||| ||||||||||| | | ||||||| |||||||| |    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtag-tttatacataagctcttatatgataggtggttatgct-ataagcacgt 7713928  T
Q  230 aattaagctgtttatccaaaca 251  Q
    ||||||| | ||||||||||||    
T  7713927 aattaagttctttatccaaaca 7713906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 2234582 - 2234542
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  2234582 aataaatttgagtgttaaaatcaattctagaatcaaaagct 2234542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 3217280 - 3217382
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| || | ||| || |||||| ||||||| ||||||||||||||||| ||||||| || ||||||||||||| ||  |||||| ||||     
T  3217280 gactttattttatcttctcttacaaaaatagc-ttatacataagcacttatatgataatcgcttatact-ataagcacttaataaatttgtttaaccaat 3217377  T
Q  250 cagag 254  Q
    |||||    
T  3217378 cagag 3217382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 10452427 - 10452541
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| ||| || || || |||||||||||||||||||||  |||||| ||||||| ||||||| ||||||||  | |||||||| |||||      
T  10452427 tatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagc-ttatacataagcactgatatgatagccacttatgct-ataagag 10452524  T
Q  227 cttaattaagctgttta 243  Q
    |||||||||| ||||||    
T  10452525 cttaattaagttgttta 10452541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 10874565 - 10874513
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  10874565 gaacactaagtttgaatgtaaaaatcaattctagaatcaaaagctctaatttc 10874513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 22742369 - 22742278
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||||| ||||| ||| |||||||||||||  |||||||||  |||||| ||||| | ||| ||||||| |||||||||||||||||    
T  22742369 tatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagc-ttatagataagaacttatacgataagcgcttatgcta 22742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 33828584 - 33828517
Alignment:
Q  193 gcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataat 261  Q
    ||||||| |||||||||| |||||||| |||||||||| |||| |||||||||||||||| ||| ||||    
T  33828584 gcacttaaatgataagcgtttatgcta-taagcacttagttaaactgtttatccaaacagggccttaat 33828517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 17225923 - 17225872
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| ||||||    
T  17225923 gaactataaatttgtatgtaaaaatcaattctagaatcaaaagctacaattt 17225872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 29269892 - 29269819
Alignment:
Q  134 ttatataaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataag 208  Q
    ||||||||||| ||| ||||||||||||| || |||||||  |||||  ||||||||||||| ||||||||||||    
T  29269892 ttatataaaacaatttgactttattttatcttctgttatagaaatag-tttatacacaagcatttatatgataag 29269819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 31461651 - 31461559
Alignment:
Q  157 ttttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||| ||||||||||  |||||| ||||||| |||||||||||  ||||| ||||||  || |||||||||||||||| |||||| |||||||    
T  31461651 ttttatcttttgttatagaaatagc-ttatacataagcacttatacaataagtgcttataata-taagcacttaattaagttgtttaaccaaaca 31461559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 4248938 - 4248870
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||||||||||| |||||||||   |||||| ||||| | |||||||||||||| ||||||||||||||    
T  4248938 gactttattttatcttttgttattgaaatagc-ttatatataagcacttatatgacaagcgcttatgcta 4248870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 8349755 - 8349838
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaag 236  Q
    |||||||||||| |||||||| |  |||||  |||||||||| ||||||||||||||| | ||||||| |||||| ||||||||||    
T  8349755 actttattttatcttttgttagagaaatagt-ttatacacaaacacttatatgataagtggttatgct-ataagcgcttaattaag 8349838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 9833187 - 9833282
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatcca 247  Q
    ||||||||||||| | |||| |||  |||| | ||||| | ||||||||||||||||| |||||||| | |||| |||||||||||| ||||||||||    
T  9833187 gactttattttatttattgtaatagaaatatc-ttatagagaagcacttatatgataaacgcttatg-ttataaacacttaattaagttgtttatcca 9833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 14340936 - 14340992
Alignment:
Q  194 cacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||| | ||||| || |||||||||||||||| ||||||||||||||    
T  14340936 cacttatatgataagtgtttatgtta-taagcacttaattaagttgtttatccaaaca 14340992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 2514705 - 2514614
Alignment:
Q  128 tatagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||||| |||||||| || || ||||||||||||| |||| |||||  |||||| ||||||| ||||||||| |||||||||  ||||||||    
T  2514705 tatagctcatataaaattagtttgactttattttatcttttattatagaaatagc-ttatacataagcacttacatgataagcatttatgcta 2514614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 3155124 - 3155057
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| || || ||||||||||| |||||||||| |||||| ||||| |||| ||||||||||||||    
T  3155124 ttatacataaccatttatatgataaacgcttatgct-ataagcgcttaaataagttgtttatccaaaca 3155057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13360715 - 13360652
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    ||||||||||||||||||||||||  |||||  ||  ||| ||||||||||||||||||||||||    
T  13360715 gactttattttatattttgttatagaaatagt-ttgcacataagcacttatatgataagcgctta 13360652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 27857377 - 27857258
Alignment:
Q  128 tatagcttatataaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcac 227  Q
    |||||||||||| ||||  || ||||||||||||| |||||||| || | || | ||||| |  |||||||||||| ||||||  ||||| |||||  |     
T  27857377 tatagcttatattaaacagtttgactttattttatcttttgttacaaaagtaac-ttatata--agcacttatatgctaagcgtatatgc-aataaatat 27857282  T
Q  228 ttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||||||||||||    
T  27857281 ttaattaagctgtttatccaaaca 27857258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 33500630 - 33500662
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||||||||||||||||||||    
T  33500630 ataagcacttaattaagctgtttatccaaacag 33500662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 34620953 - 34620913
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  34620953 aataaattttagtgtaaaaatcaattctagaatcagaagct 34620913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 34748390 - 34748350
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  34748390 aataaattttagtgtaaaaatcaattctagaatcagaagct 34748350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 852602 - 852551
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||| ||||| |||||||||||||||||||||||| || || |||||||    
T  852602 aacaatacatttgggtgtaaaaatcaattctagaatcagaacctacaatttc 852551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 31668781 - 31668843
Alignment:
Q  156 attttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||||| ||||||||||  |||||| ||||||| |||||||||||||||||  ||||||||||    
T  31668781 attttatgttttgttatagaaatagc-ttatacataagcacttatatgataattgcttatgcta 31668843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 7351699 - 7351792
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    ||||||||||||| ||| |||||  |||||  ||||||| ||||| |||||||||||| ||||||||| ||||  ||||| |||| ||||||||||||    
T  7351699 actttattttatagtttattatataaatagt-ttatacataagcatttatatgataagagcttatgct-ataa--acttagttaacctgtttatccaa 7351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 7952599 - 7952569
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaat 49  Q
    |||||||||||||||||||||||||||||||    
T  7952599 taaatttgagtgtaaaaatcaattctagaat 7952569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 25388146 - 25388108
Alignment:
Q  15 acaataaatttgagtgtaaaaatcaattctagaatcaaa 53  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  25388146 acaataaatttgagtgtcaaaatcaattctaaaatcaaa 25388108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 28130029 - 28130097
Alignment:
Q  164 ttttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaatta 234  Q
    ||||||||||  |||||| ||| ||||||| ||||||||||||  |||||||||| |||||||||||||||    
T  28130029 ttttgttatagaaatagc-ttaaacacaagtacttatatgatagacgcttatgct-ataagcacttaatta 28130097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 21920014 - 21919954
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||||||||||||  |||||||| |||||| |||||||||| |  ||||||||||||    
T  21920014 aagcacttatatgataagtacttatgct-ataagcgcttaattaagtttcttatccaaacag 21919954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 28531626 - 28531694
Alignment:
Q  145 tattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||| ||||||||||||| ||||||||||  |||| | |||||||  ||||||| |||||||||||||||    
T  28531626 tatttgactttattttatcttttgttatataaataac-ttatacaagagcacttttatgataagcgctta 28531694  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 29274296 - 29274376
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataag 208  Q
    |||||||||||| ||||| ||| ||||||||||||| ||||| ||||  |||||| ||||||| ||||| || |||||||||    
T  29274296 tatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagc-ttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 31807984 - 31808017
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacaga 253  Q
    ||||||||||||||||| ||||||||||||||||    
T  31807984 ataagcacttaattaagttgtttatccaaacaga 31808017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 33259788 - 33259698
Alignment:
Q  158 tttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||| ||||||||||| |||||| ||||||| |||||||||||||  |||| ||||| || ||||||  | ||||| ||||||||||||||||    
T  33259788 tttatcttttgttataaaaatagc-ttatacataagcacttatatgtaaagctcttat-cttataagct-tgaattaggctgtttatccaaaca 33259698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 34898767 - 34898726
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaa 54  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  34898767 gaacaataaattcgagtgttaaaatcaattctagaataaaaa 34898726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 740955 - 741055
Alignment:
Q  150 gactttattttatattttgttata---agaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatcc 246  Q
    ||||||||||||| ||||||||||   | |||||| ||||||| ||||| ||||||||||| ||||| |||| | | |||| |||||||  |||||||||    
T  740955 gactttattttatcttttgttatagaaaaaatagc-ttatacataagcatttatatgataaacgcttctgct-acaggcacgtaattaaattgtttatcc 741052  T
Q  247 aaa 249  Q
    |||    
T  741053 aaa 741055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 2205704 - 2205760
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||| ||||||| ||||||||||| ||||  |||||||||| ||| ||||||||||    
T  2205704 acttacatgataaacgcttatgctattaagggcttaattaagttgtgtatccaaaca 2205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 2785798 - 2785857
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||| ||||||| ||||| |||||||| |||||  ||||||||| ||||||||||||||    
T  2785798 aagcacatatatgacaagcgtttatgcta-taagcgattaattaagttgtttatccaaaca 2785857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 4003722 - 4003785
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatcca 247  Q
    ||||||| |||||||||||  ||||   ||||||||| |||||||||||||||| ||||||||||    
T  4003722 ttatacataagcacttatagcataaaaacttatgcta-taagcacttaattaagttgtttatcca 4003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 4910979 - 4910935
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| |||||||||  ||| |||||||||||||||||||||||||    
T  4910979 gaactataaatttgtatgtgaaaatcaattctagaatcaaaagct 4910935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25195921 - 25195877
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||| ||||||||| ||||| || |||||||||||||||||||||    
T  25195921 gaactataaatttgtgtgtacaattcaattctagaatcaaaagct 25195877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 26680021 - 26679977
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||| |||| ||||||||||||||| | |||||||||||    
T  26680021 gaacaataaacttgactgtaaaaatcaattcaataatcaaaagct 26679977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 30004836 - 30004773
Alignment:
Q  197 ttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataat 261  Q
    |||||||||||   ||||||||| |||||||| ||||||  ||||||||||||||||||| ||||    
T  30004836 ttatatgataatttcttatgcta-taagcactcaattaaattgtttatccaaacagagccttaat 30004773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 33416360 - 33416267
Alignment:
Q  155 tattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||||| ||||||||||| |||||| ||||||| ||||||||  || || ||||||||| || ||||||  ||||||| | ||||||||||||||    
T  33416360 tattttatcttttgttataaaaatagc-ttatacataagcactttgataatgagcgcttat-cttataagc-tttaattaggttgtttatccaaaca 33416267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 3102695 - 3102573
Alignment:
Q  129 atagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcac 227  Q
    |||| |||||||||| || || ||||||||||||||||||| ||||| |||||| ||||||| ||||| ||||||||||| |  ||||| |  ||||| |    
T  3102695 atagattatataaaaatagtttgactttattttatattttgctataaaaatagc-ttatacataagcagttatatgataaacatttatgttt-taagcgc 3102598  T
Q  228 ttaattaagctgtttatccaaacag 252  Q
    ||||| |||||||||||||||||||    
T  3102597 ttaataaagctgtttatccaaacag 3102573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 5133750 - 5133652
Alignment:
Q  152 ctttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta--ataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||| ||||||||||  |||||| ||||||| |||||   |||||||||| ||||||||||  |||| |||||||||||||||||||||||||    
T  5133750 ctttattttatcttttgttatagaaatagc-ttatacataagcaa--atatgataagtgcttatgctataataaacacttaattaagctgtttatccaaa 5133654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 33961995 - 33962048
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttca 66  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  33961995 gaacaataaatttgagtctaaaaatcaattatagaatcaaaaactccaatttca 33962048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 251
Target Start/End: Complemental strand, 5942904 - 5942806
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||||||||| ||||| ||||  |||||| || |||||||||||  || ||||||| |||||||| ||||||| |||||||||| |||||||||||||    
T  5942904 actttattttatcttttgatatagaaatagc-ttgtacacaagcaccgatgtgataagtgcttatgc-aataagcgcttaattaagttgtttatccaaac 5942807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 39567882 - 39567784
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttat-atgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||| ||||||||||  |||| | |||||||||||  ||||| ||||||||||||||||| |||||||  | ||||||||||||||||||||    
T  39567882 actttattttatcttttgttatagaaatatc-ttatacacaagtgcttatcatgataagcgcttatgc-aataagctgtgaattaagctgtttatccaaa 39567785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 44439325 - 44439277
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaa 61  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  44439325 gaacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaa 44439277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 10198568 - 10198664
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaa 248  Q
    ||||||||||||| |||  ||||| ||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||| |||||||| |||| ||||||    
T  10198568 gactttattttatctttacttatatgaatagc-ttatacaaaagtacttatatgataagcactcatgct-ataagcacctaattaagttgttaatccaa 10198664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 256
Target Start/End: Original strand, 33197329 - 33197433
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||| ||| ||||||||||  |||||| ||||| | |||||||||||||||||||| ||||| | |||||   |||||| || ||||||||||||    
T  33197329 gactttattctatcttttgttatagaaatagc-ttatagataagcacttatatgataagcgtttatg-ttataagtgtttaatttagttgtttatccaaa 33197426  T
Q  250 cagagcc 256  Q
    |||||||    
T  33197427 cagagcc 33197433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 42741042 - 42741004
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42741042 taaatttgagtgtaaaaatcaattctagaatcaaaagct 42741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 8481285 - 8481329
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagctccaa 61  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  8481285 aataaatttgagtctaaaaatcaattcttgaatcaaaagctccaa 8481329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 18962129 - 18962228
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaac 250  Q
    |||||||||||| ||||||||||| |||||| | ||||| ||||||||| ||||||| | | | |||||  || |||||| ||||| |||||||||||||    
T  18962129 actttattttatcttttgttataaaaatagc-taatacataagcacttacatgataaacacctgtgctataaaacacttagttaagatgtttatccaaac 18962227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 42974300 - 42974233
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||| |||||||||| | ||||||| |||||| |||||||||| || |||||||||||    
T  42974300 ttatacacaagcactaatatgataagtgtttatgct-ataagctcttaattaagttgcttatccaaaca 42974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 42982611 - 42982563
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  42982611 aataaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttc 42982563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 3476443 - 3476494
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||| |||||    
T  3476443 gaacaatacatttgaatgtaaaaataaattctagaatcaaaagctctaattt 3476494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 10618956 - 10619007
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  10618956 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttc 10619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 15866735 - 15866821
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||||||||||| ||||| | |||||||||||||| ||||||||| || |||| | |||||||||| ||||| |||||||||| ||||    
T  15866735 tatagcttatatgaaaacaagtcgactttattttacattttgttacaaaaataac-ttatacacaaacacttgtatgataagcactta 15866821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 7139744 - 7139706
Alignment:
Q  15 acaataaatttgagtgtaaaaatcaattctagaatcaaa 53  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  7139744 acaataaatttgattgtaaaaatcaattctagaatcaaa 7139706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 11393459 - 11393555
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||| ||| ||||| ||||  |||||| ||||| | ||||||||||||||||| | ||| ||||| ||||  |||||||||||||||||||||||||    
T  11393459 tttattatatcttttgatatagaaatagc-ttatagataagcacttatatgataaacacttgtgcta-taagtgcttaattaagctgtttatccaaaca 11393555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 11410120 - 11410216
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    |||||| ||| ||||| ||||  |||||| ||||| | ||||||||||||||||| | ||| ||||| ||||  |||||||||||||||||||||||||    
T  11410120 tttattatatcttttgatatagaaatagc-ttatagataagcacttatatgataaacacttgtgcta-taagtgcttaattaagctgtttatccaaaca 11410216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 13869229 - 13869296
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataatca 263  Q
    |||| ||||||||| | |||||||| ||||| ||||||| ||||||||||||||||||| || ||||||    
T  13869229 acttctatgataagtgtttatgcta-taagcgcttaattgagctgtttatccaaacagaaccttaatca 13869296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 16488395 - 16488347
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||| ||| | |||||||||||||||||| ||||||||||||    
T  16488395 aataaatttgattgttataatcaattctagaatcaacagctccaatttc 16488347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 5903281 - 5903184
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||||||||||||||  |||| |  ||| || ||| |||||||| |||| ||||| |||| |||| || | ||||||||||||||||||||    
T  5903281 gactttattttatattttgttatagaaataac-gtatgcataagaacttatataataaacgcttgtgct-ataaccattaaattaagctgtttatccaaa 5903184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 35459900 - 35459822
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    ||||| ||| ||||||||||||| ||||| ||||  |||||| ||||||| || |||||||||||||| | |||||||||    
T  35459900 aaaacaatttgactttattttatcttttggtatacaaatagc-ttatacaaaatcacttatatgataaacacttatgcta 35459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 37766778 - 37766720
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagc 209  Q
    ||||||||||||| |||||| ||| ||||||| | ||||| |||||||||||||||||||    
T  37766778 gactttattttattttttgtcatatgaatagc-taatacataagcacttatatgataagc 37766720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 37845440 - 37845498
Alignment:
Q  148 tcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    |||||||||||||||||||| |||||| ||||||| |||| | ||| |||||||||||||    
T  37845440 tcgactttattttatattttattataaaaatagca-tataaataagaacttatatgataa 37845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 41240964 - 41241045
Alignment:
Q  147 ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcactta 230  Q
    ||||||||||||||||||||||||||| ||||||  ||||||| || |||| | ||| |||| ||||||||  |||||||||||    
T  41240964 ttcgactttattttatattttgttataggaatag-tttatacataaccactcacatggtaagtgcttatgc-cataagcactta 41241045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 215
Target Start/End: Original strand, 44606180 - 44606242
Alignment:
Q  152 ctttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttat 215  Q
    ||||||||||| ||||||||| | |||||| ||||||| || ||||||||| ||||||||||||    
T  44606180 ctttattttatcttttgttatgaaaatagc-ttatacataaacacttatataataagcgcttat 44606242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3352142 - 3352084
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    ||||||||| |||| |||||||||| |||||||||||||| ||||| |  |||||||||    
T  3352142 ataaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagt 3352084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 6561307 - 6561250
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||||||||| |||||||| |||| |||| |||| || ||||||||||||    
T  6561307 aagcacttatatgataagctcttatgct-ataaacactgaattcagttgtttatccaaa 6561250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 7630253 - 7630215
Alignment:
Q  24 ttgagtgtaaaaatcaattctagaatcaaaagctccaat 62  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  7630253 ttgagtggaaaaatcaattctagaatcaaaagctacaat 7630215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 28803596 - 28803688
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttat 244  Q
    ||||||||||||| |||||||||   |||| | ||||| | |||||||||||||||||||  ||||||  |||| ||||||||||| ||||||||    
T  28803596 gactttattttatcttttgttatcgaaataac-ttatatataagcacttatatgataagcatttatgc-cataaacacttaattaaactgtttat 28803688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 37420213 - 37420243
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctaga 47  Q
    |||||||||||||||||||||||||||||||    
T  37420213 aataaatttgagtgtaaaaatcaattctaga 37420243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 4550725 - 4550657
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| |||||||||| ||||||| | |||||||| ||||   ||||||||| |||||||||||||||    
T  4550725 ttatacataagcacttatgtgataagagattatgcta-taagttgttaattaagttgtttatccaaacag 4550657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 16013727 - 16013760
Alignment:
Q  16 caataaatttgagtgtaaaaatcaattctagaat 49  Q
    |||||||||||||||||||||||| |||||||||    
T  16013727 caataaatttgagtgtaaaaatcatttctagaat 16013760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 32098398 - 32098503
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcactta---tatgataagcgcttatgctaataagcacttaattaagctgtttatcc 246  Q
    ||||||||||||| ||||||||||  |||||| ||||| | ||||| |||   ||||||||  | |||||||| ||||||||||| |||| |||||||||    
T  32098398 gactttattttatcttttgttatagaaatagc-ttatatataagcatttagtatatgataactgtttatgcta-taagcacttaagtaagttgtttatcc 32098495  T
Q  247 aaacagag 254  Q
    ||| ||||    
T  32098496 aaatagag 32098503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 42817509 - 42817549
Alignment:
Q  194 cacttatatgataagcgcttatgctaataagcacttaattaa 235  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  42817509 cacttatatgataaacgcttatgct-ataagcacttaattaa 42817549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 43635222 - 43635290
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||| ||||  ||| |||||||| |||||||||| ||||  ||||||||||||||||||| ||||||    
T  43635222 ttatacataagcgattacatgataagtgcttatgcta-taagtgcttaattaagctgtttatctaaacag 43635290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 43808555 - 43808473
Alignment:
Q  151 actttattttatattttgttataagaa-tagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaa 235  Q
    |||||||||||| ||| ||||||| || |||| ||||||| || ||||||||||||| ||||||||||| |||| |||||||||||    
T  43808555 actttattttatgttt-gttataaaaaatagc-ttatacataaacacttatatgatacgcgcttatgct-ataaacacttaattaa 43808473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1305963 - 1305919
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||||| |||| ||||||||||||||| | |||||||||||    
T  1305963 gaacaataaacttgactgtaaaaatcaattcaataatcaaaagct 1305919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 4894175 - 4894215
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||| ||| |||||||| ||||||||||||||    
T  4894175 aataaatttgagtataataatcaattatagaatcaaaagct 4894215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 6546982 - 6546934
Alignment:
Q  127 ctatagcttatata-aaactattcgactttattttatattttgttataa 174  Q
    |||||||||||||| |||| ||| ||||||||||||| |||||||||||    
T  6546982 ctatagcttatatataaacaatttgactttattttatcttttgttataa 6546934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 11759873 - 11759913
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaa 53  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  11759873 gaactataaatttgtatgtaaaaatcaattctagaatcaaa 11759913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 13864651 - 13864577
Alignment:
Q  128 tatagcttatataaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatga 204  Q
    ||||||||||||||||  || |||||||||||||  ||||||||||  |||||| ||||||| || |||||||||||    
T  13864651 tatagcttatataaaaaaat-cgactttattttaccttttgttatagaaatagc-ttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 17952770 - 17952853
Alignment:
Q  130 tagcttatataaaacta-ttcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctt 213  Q
    |||||||||| ||| || || ||||||||||||| ||||||||||  |||||| ||||| | |||| ||||||||||||| ||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagc-ttatatataagctcttatatgataagtgctt 17952853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 34764234 - 34764194
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacagagccataa 260  Q
    |||||||| ||||||||||||||||||||||| || |||||    
T  34764234 ataagcacataattaagctgtttatccaaacatagtcataa 34764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 41494088 - 41494136
Alignment:
Q  16 caataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||||||| |||||||||||||||| || ||||| ||||| ||||||    
T  41494088 caataaatttaagtgtaaaaatcaattataaaatcagaagctacaattt 41494136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 46853548 - 46853594
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctcc 59  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  46853548 gaacaataaatttgagtgttaaaatcaattctagaatcaaaagctcc 46853594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 49772748 - 49772860
Alignment:
Q  140 aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta-ataagcacttaattaagct 238  Q
    ||||| ||| ||||||||||||| |||| ||| || |||||| ||||||| || ||||||||||||||| |  ||||||| |||||| |||||||||| |    
T  49772748 aaaacaattagactttattttattttttattacaaaaatagc-ttatacataaacacttatatgataagtgtctatgctatataagcgcttaattaagtt 49772846  T
Q  239 gtttatccaaacag 252  Q
    |||||| |||||||    
T  49772847 gtttattcaaacag 49772860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 27291029 - 27291089
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||  ||||||||||||||    
T  27291029 aagcacttatatgataaccgcatatgctaataagaacttaattaaattgtttatccaaaca 27291089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 35264425 - 35264477
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  35264425 gaacaataaatttaagtgttaaaatcaattctagaatcaaaagctctaatttc 35264477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 44958620 - 44958672
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  44958620 gaacaataaagttgagtgttaaaatcatttctagaatcaaaagctccaatttc 44958672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 23187916 - 23187865
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  23187916 gaacaacaaatttgagtgtaaaattcaattctagaattaaaagctccaattt 23187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 35058433 - 35058380
Alignment:
Q  13 gaacaataa-atttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  35058433 gaacaataatatttgagtgttaaaatcaattctagaatcaaaagctcgaatttc 35058380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 3845129 - 3845180
Alignment:
Q  15 acaataaatttgagtgtaaaa-atcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  3845129 acaataaattttagtgtaaaaaatcaattctagaatcaaaagctccagtttc 3845180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 38332568 - 38332619
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaattt 64  Q
    |||||||||||||||||||||| | ||||| |||||||| ||||||||||||    
T  38332568 gaacaataaatttgagtgtaaataccaattttagaatcagaagctccaattt 38332619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 51285640 - 51285597
Alignment:
Q  14 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||    
T  51285640 aacaacaaatttgagtgcaaaaatcaattctagaatcaaaagct 51285597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 34318068 - 34317964
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||||||||||||||  |||||| ||||||   |||||| |||  ||||||||||||||| |||  ||||||||| ||| ||||||| |||    
T  34318068 gactttattttatattttgttatagaaatagc-ttatacttgagcactgataccataagcgcttatgct-atagtcacttaattgagccgtttatcaaaa 34317971  T
Q  250 cagagcc 256  Q
    || ||||    
T  34317970 catagcc 34317964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 905060 - 905159
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    ||||||||||||| ||||||||||  |||||| ||||||  |||| |||||||||||   ||||||||||| |||| |||| ||||||| ||||| ||||    
T  905060 gactttattttatcttttgttatagaaatagc-ttatacttaagcgcttatatgatataggcttatgctaa-aagcgcttacttaagctatttatgcaaa 905157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 3776586 - 3776541
Alignment:
Q  20 aaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||    
T  3776586 aaatttgagtgtaaaaattaattctagaatcagaagctacaatttc 3776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 25964419 - 25964359
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgctta 214  Q
    |||||||||| ||||||||||| |||||| ||||||| ||| ||||||||||||||| ||||    
T  25964419 tttattttatcttttgttataaaaatagc-ttatacaaaagaacttatatgataagcactta 25964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 27266808 - 27266860
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||| |||||||    
T  27266808 gaacaataaatttgagtgtaaaaattaattcttgaatcattagctacaatttc 27266860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 37335048 - 37335092
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||| ||||  |||||||||||||||||||||||||||||||    
T  37335048 gaacaatgaattcaagtgtaaaaatcaattctagaatcaaaagct 37335092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 46018671 - 46018623
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 65  Q
    |||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  46018671 aataaatttgagtgaacgaatcaattctagaatcaaaagctgcaatttc 46018623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 12985464 - 12985522
Alignment:
Q  201 atgataagcgcttatgctaataagcacttaattaagctgtttatccaaacagagccataa 260  Q
    |||||||||||||||   ||||| ||||||||||| ||||||||||||||||| ||||||    
T  12985464 atgataagcgcttatag-aataaacacttaattaatctgtttatccaaacagaaccataa 12985522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 35253486 - 35253525
Alignment:
Q  18 ataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  35253486 ataaatttgagtgtaaaaatcaattctagaaccagaagct 35253525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 37273089 - 37273054
Alignment:
Q  220 ataagcacttaattaagctgtttatccaaacagagc 255  Q
    |||||||||||||||||||| |||||||||||||||    
T  37273089 ataagcacttaattaagctgcttatccaaacagagc 37273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 39256735 - 39256684
Alignment:
Q  25 tgagtgtaaaaatcaattctagaatcaaaagctccaatttcatacttcaagt 76  Q
    |||||||||||||||||| |||||| |||||||||| |||| | ||||||||    
T  39256735 tgagtgtaaaaatcaattttagaattaaaagctccagtttcttccttcaagt 39256684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 41028941 - 41028999
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagc 209  Q
    ||||||||||| | ||||||||||  |||||| ||||||| |||||||||||||||||||    
T  41028941 gactttattttttcttttgttatagaaatagc-ttatacataagcacttatatgataagc 41028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 3758028 - 3757959
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaa 220  Q
    |||||||||||||||||||||| || |||||| ||||||| ||||||||| |  |||| | ||||||||||    
T  3758028 gactttattttatattttgttacaaaaatagc-ttatacataagcacttacacaataaacacttatgctaa 3757959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 16790181 - 16790246
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta 219  Q
    |||||||||| ||||||||||  |||| | ||||| | ||||||||||||||||| |||||||||||    
T  16790181 tttattttatcttttgttatagaaataac-ttatatataagcacttatatgataaacgcttatgcta 16790246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 16790449 - 16790502
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    |||||||||| | ||||||||| |||||| ||||||| |||||||||||||||||    
T  16790449 tttattttatctgttgttataaaaatagc-ttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 28289243 - 28289312
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacaga 253  Q
    |||||||  |||||||| |||||||| | ||||||||| || ||||||||||| |||||||||||| ||||    
T  28289243 ttatacatgagcacttagatgataagtgtttatgctaaaaa-cacttaattaaactgtttatccaagcaga 28289312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 28842964 - 28843012
Alignment:
Q  166 ttgttataagaatagcattatacacaagcacttatatgataagcgcttatg 216  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  28842964 ttgttataa-aatagc-ttatacataagcacttatatgataagcgcttatg 28843012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 32523360 - 32523398
Alignment:
Q  19 taaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  32523360 taaatttgtgtgtaaaaatcaattttagaatcaaaagct 32523398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 37308214 - 37308255
Alignment:
Q  210 gcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  37308214 gcttatgcta-taagcacttaattaagttgtttatccaaacag 37308255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 44240103 - 44240042
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacaga 253  Q
    |||||||||||||||||  | |||||||| |||||||||| ||||| ||||||||||| ||||    
T  44240103 aagcacttatatgataaatgattatgcta-taagcacttacttaagttgtttatccaagcaga 44240042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 44374724 - 44374792
Alignment:
Q  140 aaaactattcgactttattttatattttgttataaga-atagcattatacacaagcacttatatgataagc 209  Q
    ||||| ||| ||||||||||||| |||||||| |||| ||||| ||||||| |||||||||||||||||||    
T  44374724 aaaacaatttgactttattttatcttttgtta-aagatatagc-ttatacataagcacttatatgataagc 44374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 2081212 - 2081268
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||| ||||| |||||||    
T  2081212 acttatatgataagcgtttatgttag-aagcacttaattaagctatttatacaaacag 2081268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 20504152 - 20504092
Alignment:
Q  191 aagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaacag 252  Q
    ||||||||| |||||||||  |||| ||| ||||| |||||||||||||||||| |||||||    
T  20504152 aagcacttaaatgataagcctttatacta-taagcgcttaattaagctgtttattcaaacag 20504092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 30301012 - 30301053
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaa 54  Q
    ||||||||||||||||||| |||| |||||||||||| ||||    
T  30301012 gaacaataaatttgagtgttaaaaccaattctagaattaaaa 30301053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 36302254 - 36302205
Alignment:
Q  13 gaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaat 62  Q
    ||||||||||||| ||||  ||||||||||||| |||||||| |||||||    
T  36302254 gaacaataaatttaagtgctaaaatcaattctaaaatcaaaatctccaat 36302205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 2076517 - 2076485
Alignment:
Q  21 aatttgagtgtaaaaatcaattctagaatcaaa 53  Q
    ||||| |||||||||||||||||||||||||||    
T  2076517 aatttaagtgtaaaaatcaattctagaatcaaa 2076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 20192673 - 20192744
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcactta 199  Q
    ||||| |||||| |||||| || ||||||||||||| ||||||||||  |||||| ||||||| |||||||||    
T  20192673 tatagattatatgaaaactgtttgactttattttatcttttgttatataaatagc-ttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 29094329 - 29094270
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgttta 243  Q
    ||||||| || ||||||||||||||| | ||||||| ||||||  ||||||||||||||||    
T  29094329 ttatacataaacacttatatgataagtgtttatgct-ataagcgtttaattaagctgttta 29094270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 31075673 - 31075580
Alignment:
Q  151 actttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgcta---ataagcacttaattaagctgttt 242  Q
    |||||| |||||||||||||| |  |||||| ||||| | ||| |||||||||| |||||||||| |||   |||||| |||||||||| |||||    
T  31075673 actttactttatattttgttaaataaatagc-ttatatataagtacttatatgacaagcgcttatactatatataagctcttaattaagttgttt 31075580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 39971320 - 39971242
Alignment:
Q  128 tatagcttatataaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataag 208  Q
    |||||||||| |||||| ||| | ||||||||||| ||||||||||  | || | ||||||| ||||||||||||||||||    
T  39971320 tatagcttat-taaaacaatttggctttattttatcttttgttatataagtaac-ttatacataagcacttatatgataag 39971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 41159089 - 41159030
Alignment:
Q  150 gactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcg 210  Q
    ||||||||||||| ||| |||||| ||||| | ||||||| ||||||||||| ||||||||    
T  41159089 gactttattttatctttagttataggaataac-ttatacataagcacttatacgataagcg 41159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 43116495 - 43116617
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    |||||||||||| |||| | || || || ||||||| ||||||||||  |||||| ||| ||| || ||||| |||||||| |  |||||||| ||| ||    
T  43116495 tatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagc-ttacacataaacacttgtatgataaacatttatgcta-taaaca 43116592  T
Q  227 cttaattaagctgtttatccaaaca 251  Q
    || ||||||| ||||||||||||||    
T  43116593 ctaaattaagttgtttatccaaaca 43116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 48271968 - 48272035
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| ||||||||||||| ||||  |||||| |  ||||| ||||||||||||||||||| |||||    
T  48271968 ttatacataagcacttatatgttaagtacttatgttt-taagctcttaattaagctgtttatctaaaca 48272035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 49739544 - 49739458
Alignment:
Q  153 tttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtt 241  Q
    |||||||||| ||||| | ||| |||||| |||||||  | ||||||||||| ||||||||||| | |||||| |||||||||| ||||    
T  49739544 tttattttatcttttgatgtaaaaatagc-ttatacatcaccacttatatgaaaagcgcttatg-tcataagcgcttaattaagttgtt 49739458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 52323999 - 52324066
Alignment:
Q  183 ttatacacaagcacttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaaca 251  Q
    ||||||| ||| ||||||||| ||| | ||||||||| |||||||||||||||| | ||||| ||||||    
T  52323999 ttatacataagtacttatatgctaaacacttatgcta-taagcacttaattaagttatttatacaaaca 52324066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 52363997 - 52363957
Alignment:
Q  87 aatcagttttggtccctcaaaaagtgaaaccaaacatacac 127  Q
    ||||| |||||||||||| ||||||| ||||||||||||||    
T  52363997 aatcaattttggtccctctaaaagtggaaccaaacatacac 52363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 27579 - 27456
Alignment:
Q  128 tatagcttatat-aaaactattcgactttattttatattttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagca 226  Q
    ||||| |||||| ||||| ||| ||||||||||||| || |||||||  |||| | ||||||| ||||||||| |||||||| ||||||||| ||||||     
T  27579 tatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataac-ttatacataagcacttacatgataagagcttatgct-ataagcg 27482  T
Q  227 cttaattaagctgtttatccaaacag 252  Q
     ||| ||||| |||||||||||||||    
T  27481 tttatttaagttgtttatccaaacag 27456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 26175 - 26228
Alignment:
Q  195 acttatatgataagcgcttatgctaataagcacttaattaagctgtttatccaaa 249  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  26175 acttatatgataagtgcttatgcta-taagcacttaattaaggtgtttatccaaa 26228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 14132 - 14172
Alignment:
Q  17 aataaatttgagtgtaaaaatcaattctagaatcaaaagct 57  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  14132 aataaatttgagtgtaaaaatcaattctagaatcataagct 14172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 63377 - 63431
Alignment:
Q  152 ctttattttatattttgttataagaatagcattatacacaagcacttatatgataa 207  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||    
T  63377 ctttattttatcttttgttataaaaatagc-ttataaacaagcacttatatgataa 63431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 8616 - 8684
Alignment:
Q  164 ttttgttataagaatagcattatacacaagcacttatatgataagcgcttatgctaataagcacttaatta 234  Q
    ||||||||||  |||||| ||| ||||||| ||||||||||||  |||||||||| |||||||||||||||    
T  8616 ttttgttatagaaatagc-ttaaacacaagtacttatatgatagacgcttatgct-ataagcacttaatta 8684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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