View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15718_high_52 (Length: 207)
Name: NF15718_high_52
Description: NF15718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15718_high_52 |
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Alignment Details
Target: chr7 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 24480304 - 24480371
Alignment:
| Q |
131 |
actcaccgtcttgcgatgaagaagcacgccgacagagagatacaaagaagagaactttgtttctgctc |
198 |
Q |
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| T |
24480304 |
actcaccgtcttgcgatgaagaagcacgccgacagagagatacaaagaagagaactttgtttctgctc |
24480371 |
T |
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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 24480196 - 24480224
Alignment:
| Q |
23 |
atgtttgattcatgaacacgtaaggaggg |
51 |
Q |
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| T |
24480196 |
atgtttgattcatgaacacgtaaggaggg |
24480224 |
T |
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