View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15718_low_19 (Length: 405)
Name: NF15718_low_19
Description: NF15718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15718_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 30 - 393
Target Start/End: Original strand, 41271861 - 41272224
Alignment:
| Q |
30 |
aatgatcgtaggaccatttaattatgggtataccaattagttaaacttaatcctccatactccccctaaaagttaggtcgtcttaccctactactcctta |
129 |
Q |
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| T |
41271861 |
aatgatcgtaggaccatttaattatgggtataccaattagttaaacttaatcctccatactccccctaaaagttaggtcgtcttaccctactactcctta |
41271960 |
T |
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| Q |
130 |
gattagtcatgttctcctataacctgtaaccttaaacctcaattattcccgcccatccacggatctccgtctattaagtgcttcttcgatgattgttatc |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
41271961 |
gattagtcatgttctcctataacctgtaaccttaaacctcaattattcccgcccatccacggatttccgtctattaagtgcttcttcgatgattgttatc |
41272060 |
T |
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| Q |
230 |
agagagactttcaaattaaggtcctctcccccattctttcttcatcccttcacatcccttcgccaccaagaaagaattctcttccgttacatgagagacc |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41272061 |
agagagactttcaaattaaggtcctctcccccattctttcttcatcccttcacatcccttcgccaccaagaaagaattctcttccgttacatgagagacc |
41272160 |
T |
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| Q |
330 |
gaccattctgttttcagaccttgatttaaaaaggagagatgtgggtttaagggaggggatttct |
393 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41272161 |
gaccattctgtcttcagaccttgatttaaaaaggagagatgtgggtttaagggaggggatttct |
41272224 |
T |
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