View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15718_low_37 (Length: 314)
Name: NF15718_low_37
Description: NF15718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15718_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 47365229 - 47365507
Alignment:
| Q |
18 |
aaagaagtgtgtatttgggaggctaaagaacaagagatttccttcgattgaagcaccaccaccattaaaagaaacaagattatgtgaacctgaggcttta |
117 |
Q |
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| T |
47365229 |
aaagaagtgtgtatttgggaggctaaagaacaagagatttccttcgattgaagcaccaccaccattaaaagaaacaagattatgtgaacctgaggcttta |
47365328 |
T |
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| Q |
118 |
acagttgctattgcctcagctgcagcagctgaagctgcttttactgctgctcaggttgcagttgaagttgttaggttccaatcggcttatcaatgtaaag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47365329 |
acagttgctattgcctcagctgcagcagctgaagctgcttttactgctgctcaggttgcagttgaagttgttaggttccaatcggcttatcaatgtaaag |
47365428 |
T |
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| Q |
218 |
gaaaaccagaagttaagcttgttaaaactaagcataatgcttctcaatcaacacatagctgcaagttaaagattgaaga |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47365429 |
gaaaaccagaagttaagcttgttaaaactaagcataatgcttctcaatcaacacatagctgcaagttaaagattgaaga |
47365507 |
T |
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