View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15718_low_60 (Length: 242)
Name: NF15718_low_60
Description: NF15718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15718_low_60 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 9003834 - 9004084
Alignment:
| Q |
1 |
taattatggaaggtttgctaggccttttgaatctactctcaacaacaatggtggttataacaatgaaaggttcatgaaacttccaaatttagaaagtcca |
100 |
Q |
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| T |
9003834 |
taattatggaaggtttgctaggccttttgaatctactctcaacaacaatggtggttataacaatgaaaggttcatgaaacttccaaatttagaaagtcca |
9003933 |
T |
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| Q |
101 |
aaatcaacaagcatggagaacaatgagaacaacaatgatgggtatcatgcaattattcaagtagatatggctaatgaaaatgaaggatcattctctg--- |
197 |
Q |
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| T |
9003934 |
aaatcaacaagcatggagaacaatgagaacaacaatgatgggtatcatgcaattattcaagtagatatggctaatgaaaatgaagggtcattctctgatc |
9004033 |
T |
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| Q |
198 |
------atcatcatcatcataacaacgtggttaataatccattagaggcat |
242 |
Q |
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| T |
9004034 |
atcatcatcatcatcatcataacaacatggttaataatccattagaggcat |
9004084 |
T |
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