View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15720_low_24 (Length: 311)
Name: NF15720_low_24
Description: NF15720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15720_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 13 - 294
Target Start/End: Complemental strand, 240901 - 240621
Alignment:
| Q |
13 |
aaaatggtatcaagagcttaattgtgagaattgagagtatagagtttgagagatagcgcgaatggtgaatacaattctttccacttttctcttgttaaaa |
112 |
Q |
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| T |
240901 |
aaaatgggatcaagagcttaattgtgagaattgagagtatagagtt-gagagatagggcgaatcgtgaatacaattctttccacttttctcttgttaaaa |
240803 |
T |
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| Q |
113 |
aagagaattataaaaagtggtgtcttcacacgaatgttgtgttaggctctcgaggtgcattagagattatagagaaaggctatgagaagccataagatga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
240802 |
aagagaattataaaaagtggtgtcttcacacgaatgttgtgttaggctctcgaggtgcattagagattatagagaaaggctatgagaagccataagatga |
240703 |
T |
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| Q |
213 |
agaaagtttgtctcaatgagaaagaagaattgtcaaatataaagaagaaatacaacaagttgtaaccctcatccatcaatat |
294 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
240702 |
agaaagtttgtttcaatgagaaagaagaattgtcaaatataaagaagaaatacaacaagttgtaaccctcatccatcaatat |
240621 |
T |
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