View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15727_high_12 (Length: 311)
Name: NF15727_high_12
Description: NF15727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15727_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 11462531 - 11462839
Alignment:
| Q |
1 |
gccaaagtgtagtatactacacagcaattagaccaatataaaaaattaacaaaaaagaccaatcccgtgcgcacgaatataacttcaatacaagaagaat |
100 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
11462531 |
gccaaagtgcagtatactacacagcaattagaccaatataaaaaattaacaaaaaagaccaatcccgtgtgcacgaatataacttcaatacaagaagaat |
11462630 |
T |
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| Q |
101 |
taaccagtccttattctgtcgagtctgtcaacgctcttccttcctttttctaattgatgatcaacgctttttcgagacttttcatgacagtcgacacttc |
200 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
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| T |
11462631 |
taaccagtccttattctgtcgagtcggtcaacgctcttccttcctttttctaattgatgatcaacactttttcgagacttttcatgacagtcaacacttc |
11462730 |
T |
|
| Q |
201 |
tccgagatctctctttatgatcaaatgtcattctcaatttctccaacatatcgccaccattactagaagacgagttttttaccttctctggtttgtctgt |
300 |
Q |
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||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
11462731 |
tccgagatctctctttatgatcaaacgtcattcttaatttctccaacatatcaccaccattactggaagacgagttttttaccttctctggtttgtctgt |
11462830 |
T |
|
| Q |
301 |
gctcctcct |
309 |
Q |
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|||| |||| |
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| T |
11462831 |
gctcttcct |
11462839 |
T |
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