View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15728_high_1 (Length: 462)
Name: NF15728_high_1
Description: NF15728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15728_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 1 - 453
Target Start/End: Original strand, 26536748 - 26537200
Alignment:
| Q |
1 |
tccaagtcgtttcttatatcacgtctttctcaaaacaaagatggaagaccgcctttgcaaagagaagagaagaatgtttggcgtcagggagatggaaaat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
26536748 |
tccaagtcgtttcttatatcacgtctttctcaaaacaaagatggaagaccgcctttgcaaagagaagagaagaatgttttgcgtcagggagatggaaaat |
26536847 |
T |
|
| Q |
101 |
atggaaaagaatcaagctttggaggtgataatgttttcatcaacagaggtggggatcacttgttgccattaacatcttcacaagctgctcctaaaacaga |
200 |
Q |
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| T |
26536848 |
atggaaaagaatcaagctttggaggtgataatgttttcatcaacagaggtggggatcacttgttgccattaacatcttcacaagctgctcctaaaacaga |
26536947 |
T |
|
| Q |
201 |
aactttgataaaagagtgtcgtttattgtctcaaggagtgccggtgaaatccttggctgctgctgacctgaagaacttggctctttcaacgtctttgcgg |
300 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
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| T |
26536948 |
aacttcgataaaagagtgtcgtttattgtctcaaggagtgccggtgaaatccttggctgctgctgacctgaagaaattggctctttcaacgtcgttgcgg |
26537047 |
T |
|
| Q |
301 |
aacaacttggtaaactcagcttcggacatagtgcctacaaatggacgtgacaaaggaaaatctgtgatgcctcaactcacaggtgggtcgagctacaatt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26537048 |
aacaacttggtaaactcagcttcggacatagtgcctacaaatggacgtgacaaaggaaaatctgtgatgcctcaactcacaggtgggtcgagctacaatt |
26537147 |
T |
|
| Q |
401 |
cagcatcccaagagcattacacaagcactaaatatcacagttattcttctctc |
453 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26537148 |
cagcatcccaagagcattacacaagcactaaatatcacagttattcttctctc |
26537200 |
T |
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