View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15729_high_7 (Length: 240)
Name: NF15729_high_7
Description: NF15729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15729_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 32216849 - 32216643
Alignment:
| Q |
21 |
gcggtgatggaatcatttgcgttggctaaggtgacaaataaaatgtgtttcgttttcacttgggtaaaataatattggatttattgtattattcacattc |
120 |
Q |
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| T |
32216849 |
gcggtgatggaatcatttgtgttggctaaggtgacaaataaaatgtgtttcgttttcacttgggtaaaataatattggatttattgtattattcacattc |
32216750 |
T |
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| Q |
121 |
ctattgtttcatctaagtgagcccttccgaaagttataagtcaattattctggccaaattaaagaaagtgtaagaaaatatgtggtgaagtgcaattaag |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32216749 |
ctattgtttcatctaagtgagcccttccgaaagttataagtcaattattctggccaaattaaagaaagtgtaagaaaatat---gtgaagtgcaattaag |
32216653 |
T |
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| Q |
221 |
aagtataatc |
230 |
Q |
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|||||||||| |
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| T |
32216652 |
aagtataatc |
32216643 |
T |
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