View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1572_high_7 (Length: 236)
Name: NF1572_high_7
Description: NF1572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1572_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 48141068 - 48140849
Alignment:
| Q |
17 |
agatcagggtgaggacaagcactgcctggtgataatggatgaagcaactgtgtgatcacatcaccagactccttaaaaagggttcgaaacgaaggtgtcc |
116 |
Q |
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| T |
48141068 |
agatcagggtgaggacaagcactgcctggtgataatggatgaagcaactgtgtgatcacatcaccagactccttaaaaagggttcgaaaggaaggtgtcc |
48140969 |
T |
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| Q |
117 |
gctttgttaacaaccgaagctctttcgcagccgctttctgatcagaaacagaacacgataacttatgaagcaatacatttaaccggtctctgtctgcatt |
216 |
Q |
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| T |
48140968 |
gctttgttaacaaccgaagctctttcgcagccgctttctgatcagaaacagaacacgataacttatgaagcaatacatttaaacggtctctgtctgcatt |
48140869 |
T |
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| Q |
217 |
agtcaccacttcatccgtgt |
236 |
Q |
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| T |
48140868 |
agtcaccacttcatccgtgt |
48140849 |
T |
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