View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1573-INSERTION-7 (Length: 470)
Name: NF1573-INSERTION-7
Description: NF1573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1573-INSERTION-7 |
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Alignment Details
Target: chr1 (Bit Score: 447; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 7 - 469
Target Start/End: Complemental strand, 51910764 - 51910302
Alignment:
| Q |
7 |
aaaaccttgctcaaattaatatagcaagaaatttgctgtcaggtcctatcccactaagtttcaaaacccttagaaatttgaattaccttgacctcagtta |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51910764 |
aaaaccttgctcaaattaatatagcaagaaatttgctgtcaggtcctatcccactaagtttcaaaacccttagaaatttgaattaccttgacctcagtta |
51910665 |
T |
|
| Q |
107 |
caatttgttatcagggtctatccctaattttgttggggagtttcaaaacttgactaatctagacctatcctataacctactgacaggaaaaattccaatt |
206 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51910664 |
caatttgttatcagggtctatccctgattttgttggggagtttcaaaacttgactaatctagacctatcctataacctactgacaggaaaaattccaatt |
51910565 |
T |
|
| Q |
207 |
tccttgttcagccttgtcaaccttttaggcttgtccttgagctataacaagctcacaggatccattccagatcagataggaggcctgaaatccctaacaa |
306 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
51910564 |
tccttgttcagccttgtcaaccttttagacttgtccttgagctataacaagctcacaggatacattccagatcagataggaggcctgaaatccctaacaa |
51910465 |
T |
|
| Q |
307 |
ctcttcagcttagtggcaatcagctcacagggaatgttccactatccatatcaaaactgcagaaactttggaaccttaatgtatcaagaaatgggctctc |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
51910464 |
ctcttcagcttagtggcaatcagctcacagggaatgttccactatccatatcaaaactgcagaaactttggaaccttaatgtatcaagaaatggactctc |
51910365 |
T |
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| Q |
407 |
aggtcccttaccagcaattcctatcaagggcattcctgcccttttgtccatagacctgtctta |
469 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51910364 |
aggtcccttaccagcaattcctatcaagggcattcctgcccttttgtccatagacctgtctta |
51910302 |
T |
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