View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15730_high_3 (Length: 235)
Name: NF15730_high_3
Description: NF15730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15730_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 45450760 - 45450966
Alignment:
| Q |
13 |
aaaatatcaagataagttgtcatataaaatatcaagacaggtgagtatattattcatatatttacacacaatagctataattgactttcattttttaaca |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45450760 |
aaaatatcaagataagttgtcatataaaatatcaagacaggtgagtatattattcatatatttacacacaatagctataattgactttcattttttaaca |
45450859 |
T |
|
| Q |
113 |
tcatcatcagagtgaagtgggatgagaagttgatttgataagcaaccttaaggtagcttattgataagcaaattaagtgttcaaatataagcgacatggt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
45450860 |
tcatcatcagagtgaagtgggatgagaagttgatttgataagcaaccttaaggtagcttattgataagcaaattaagtgttcaaatataagcgacatggt |
45450959 |
T |
|
| Q |
213 |
ctcattg |
219 |
Q |
| |
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||||||| |
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|
| T |
45450960 |
ctcattg |
45450966 |
T |
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