View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15731_low_4 (Length: 522)

Name: NF15731_low_4
Description: NF15731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15731_low_4
NF15731_low_4
[»] chr2 (49 HSPs)
chr2 (341-503)||(2920735-2920897)
chr2 (122-306)||(2920515-2920700)
chr2 (12-163)||(24512141-24512292)
chr2 (14-162)||(41500184-41500332)
chr2 (68-203)||(2917617-2917752)
chr2 (12-136)||(43491110-43491234)
chr2 (12-77)||(2920464-2920529)
chr2 (12-109)||(39393065-39393162)
chr2 (63-204)||(45475373-45475514)
chr2 (12-75)||(40679545-40679608)
chr2 (12-162)||(2648092-2648242)
chr2 (12-140)||(34638138-34638262)
chr2 (63-163)||(19187222-19187322)
chr2 (18-112)||(10365746-10365840)
chr2 (12-76)||(29093779-29093840)
chr2 (61-163)||(34918426-34918528)
chr2 (61-162)||(25184827-25184927)
chr2 (63-204)||(34921758-34921898)
chr2 (64-202)||(8268749-8268887)
chr2 (64-162)||(35493341-35493439)
chr2 (61-162)||(82259-82359)
chr2 (63-140)||(12908428-12908505)
chr2 (83-203)||(23409520-23409640)
chr2 (63-151)||(34639313-34639401)
chr2 (111-203)||(45479841-45479933)
chr2 (83-162)||(1149447-1149526)
chr2 (12-75)||(26858175-26858238)
chr2 (61-160)||(43943666-43943765)
chr2 (82-200)||(41181374-41181492)
chr2 (12-64)||(16580559-16580611)
chr2 (53-140)||(17424128-17424216)
chr2 (96-143)||(12905543-12905590)
chr2 (85-200)||(28342460-28342575)
chr2 (84-162)||(1101072-1101150)
chr2 (61-143)||(3795331-3795413)
chr2 (61-143)||(40156393-40156475)
chr2 (96-201)||(19186683-19186788)
chr2 (14-110)||(43982226-43982326)
chr2 (61-140)||(24601636-24601715)
chr2 (61-140)||(24612399-24612478)
chr2 (61-144)||(29407884-29407967)
chr2 (86-152)||(41053690-41053756)
chr2 (64-162)||(45137433-45137531)
chr2 (82-159)||(2648776-2648853)
chr2 (61-162)||(27276371-27276472)
chr2 (107-167)||(23786094-23786154)
chr2 (83-139)||(36255732-36255788)
chr2 (61-113)||(41053565-41053617)
chr2 (127-163)||(43493320-43493356)
[»] chr5 (39 HSPs)
chr5 (12-162)||(18307229-18307379)
chr5 (26-206)||(20192284-20192464)
chr5 (12-200)||(3600273-3600462)
chr5 (12-140)||(542738-542866)
chr5 (63-203)||(18538334-18538474)
chr5 (12-128)||(25497520-25497636)
chr5 (83-203)||(34682191-34682311)
chr5 (64-206)||(3603148-3603290)
chr5 (12-105)||(11346039-11346133)
chr5 (14-76)||(42865754-42865816)
chr5 (64-200)||(20200148-20200284)
chr5 (12-77)||(35564321-35564386)
chr5 (62-162)||(34123933-34124033)
chr5 (62-167)||(38968065-38968170)
chr5 (64-205)||(25499887-25500030)
chr5 (68-207)||(1398534-1398673)
chr5 (96-203)||(35567059-35567166)
chr5 (12-77)||(8537225-8537291)
chr5 (96-200)||(18310053-18310157)
chr5 (96-204)||(19228678-19228786)
chr5 (63-162)||(33993255-33993354)
chr5 (61-143)||(33995145-33995227)
chr5 (61-167)||(34122494-34122600)
chr5 (14-110)||(19037416-19037516)
chr5 (82-203)||(24053114-24053235)
chr5 (68-133)||(30354400-30354465)
chr5 (62-169)||(8702196-8702303)
chr5 (61-143)||(17965843-17965925)
chr5 (66-200)||(42539375-42539509)
chr5 (61-162)||(17966883-17966984)
chr5 (61-162)||(41798793-41798894)
chr5 (97-162)||(42865811-42865876)
chr5 (12-52)||(1401388-1401428)
chr5 (14-140)||(30708899-30709030)
chr5 (14-105)||(7994-8088)
chr5 (61-140)||(30192489-30192568)
chr5 (64-150)||(28388519-28388605)
chr5 (61-105)||(7762241-7762285)
chr5 (20-142)||(28880316-28880443)
[»] chr8 (30 HSPs)
chr8 (12-200)||(18441389-18441577)
chr8 (14-207)||(41858073-41858264)
chr8 (14-202)||(42602395-42602583)
chr8 (16-102)||(26451515-26451601)
chr8 (12-76)||(3395927-3395991)
chr8 (64-200)||(18438571-18438707)
chr8 (12-77)||(41274652-41274717)
chr8 (12-76)||(22547504-22547568)
chr8 (63-199)||(41855306-41855442)
chr8 (83-203)||(7168022-7168142)
chr8 (64-155)||(42605234-42605325)
chr8 (63-201)||(22577601-22577739)
chr8 (62-162)||(1114718-1114818)
chr8 (62-141)||(34823014-34823093)
chr8 (61-167)||(35962277-35962383)
chr8 (26-76)||(38871834-38871884)
chr8 (111-204)||(3395825-3395918)
chr8 (96-144)||(4866427-4866475)
chr8 (63-162)||(18205761-18205860)
chr8 (12-71)||(24860448-24860507)
chr8 (14-76)||(37779713-37779773)
chr8 (61-143)||(21406261-21406343)
chr8 (61-143)||(21800753-21800835)
chr8 (83-167)||(7172606-7172690)
chr8 (123-163)||(28168658-28168698)
chr8 (86-162)||(45454381-45454457)
chr8 (14-77)||(15033095-15033160)
chr8 (61-143)||(21835176-21835258)
chr8 (62-200)||(40077248-40077386)
chr8 (61-141)||(7121783-7121863)
[»] chr3 (61 HSPs)
chr3 (14-162)||(41802973-41803121)
chr3 (12-143)||(34694382-34694513)
chr3 (12-203)||(45101796-45101987)
chr3 (14-162)||(51402348-51402496)
chr3 (14-150)||(55207613-55207749)
chr3 (12-162)||(13896824-13896974)
chr3 (63-208)||(29929355-29929500)
chr3 (63-208)||(29978509-29978654)
chr3 (12-200)||(41577012-41577200)
chr3 (12-152)||(55385122-55385262)
chr3 (12-152)||(43476176-43476317)
chr3 (12-160)||(52570514-52570661)
chr3 (16-162)||(41137693-41137829)
chr3 (63-202)||(28611099-28611238)
chr3 (12-77)||(51696522-51696587)
chr3 (12-76)||(19454299-19454363)
chr3 (23-109)||(24703374-24703460)
chr3 (12-142)||(49219739-49219869)
chr3 (63-208)||(29918340-29918485)
chr3 (63-208)||(29967493-29967638)
chr3 (64-205)||(41579724-41579865)
chr3 (63-167)||(42756129-42756233)
chr3 (15-135)||(46347672-46347791)
chr3 (12-110)||(4004750-4004849)
chr3 (12-74)||(7245155-7245217)
chr3 (12-105)||(36134355-36134449)
chr3 (12-150)||(49609370-49609508)
chr3 (64-205)||(2432943-2433084)
chr3 (12-77)||(43568926-43568991)
chr3 (67-207)||(30256006-30256146)
chr3 (83-163)||(46344911-46344991)
chr3 (12-76)||(2271260-2271325)
chr3 (96-203)||(43571717-43571824)
chr3 (12-143)||(34648150-34648283)
chr3 (14-140)||(2647648-2647776)
chr3 (61-142)||(34691620-34691701)
chr3 (68-160)||(7247864-7247956)
chr3 (64-162)||(49268845-49268943)
chr3 (83-200)||(41805694-41805811)
chr3 (14-110)||(49140793-49140893)
chr3 (96-152)||(7839531-7839587)
chr3 (122-202)||(42807658-42807738)
chr3 (62-162)||(49196447-49196547)
chr3 (61-140)||(32593109-32593188)
chr3 (12-62)||(2426559-2426609)
chr3 (61-143)||(2743392-2743474)
chr3 (64-142)||(19440251-19440329)
chr3 (16-138)||(20366191-20366313)
chr3 (14-110)||(34049107-34049207)
chr3 (66-207)||(48888671-48888811)
chr3 (14-110)||(54389822-54389922)
chr3 (61-152)||(600541-600632)
chr3 (61-152)||(19341591-19341682)
chr3 (61-140)||(24700718-24700797)
chr3 (61-151)||(48246398-48246488)
chr3 (65-162)||(11380416-11380513)
chr3 (67-152)||(46989532-46989617)
chr3 (63-152)||(48250868-48250957)
chr3 (63-200)||(52567700-52567837)
chr3 (64-136)||(9582548-9582620)
chr3 (83-143)||(13743287-13743347)
[»] chr6 (34 HSPs)
chr6 (12-163)||(12783905-12784056)
chr6 (12-158)||(13401465-13401611)
chr6 (12-76)||(29061331-29061395)
chr6 (12-74)||(29065791-29065853)
chr6 (12-74)||(29074804-29074866)
chr6 (12-74)||(29079568-29079630)
chr6 (12-74)||(29107377-29107439)
chr6 (96-203)||(13479660-13479767)
chr6 (60-205)||(18001146-18001290)
chr6 (63-160)||(23958867-23958964)
chr6 (63-159)||(16192747-16192843)
chr6 (12-76)||(32034340-32034404)
chr6 (96-163)||(23986013-23986080)
chr6 (61-151)||(31768739-31768829)
chr6 (64-200)||(13404632-13404768)
chr6 (61-137)||(31146373-31146449)
chr6 (61-143)||(13388705-13388787)
chr6 (14-105)||(30258263-30258356)
chr6 (61-192)||(2050974-2051104)
chr6 (14-110)||(6204854-6204954)
chr6 (14-110)||(11691821-11691921)
chr6 (66-203)||(32643523-32643660)
chr6 (96-152)||(7537183-7537239)
chr6 (53-140)||(22305104-22305192)
chr6 (12-78)||(17596764-17596833)
chr6 (82-200)||(29286166-29286284)
chr6 (19-56)||(26855976-26856013)
chr6 (61-137)||(8193206-8193282)
chr6 (61-137)||(28362728-28362804)
chr6 (146-205)||(32026037-32026096)
chr6 (131-205)||(2405438-2405512)
chr6 (107-160)||(6320532-6320585)
chr6 (61-102)||(11157771-11157812)
chr6 (61-105)||(11840247-11840291)
[»] chr4 (50 HSPs)
chr4 (12-203)||(958542-958732)
chr4 (12-203)||(44561278-44561469)
chr4 (12-162)||(56138222-56138377)
chr4 (30-203)||(29700268-29700441)
chr4 (12-76)||(34530743-34530807)
chr4 (12-76)||(39588127-39588191)
chr4 (12-76)||(51429277-51429341)
chr4 (64-202)||(37959720-37959858)
chr4 (12-76)||(34154376-34154440)
chr4 (12-76)||(56304911-56304975)
chr4 (96-203)||(4768612-4768719)
chr4 (64-203)||(51426471-51426610)
chr4 (14-76)||(6283417-6283479)
chr4 (16-140)||(1041932-1042056)
chr4 (84-204)||(21472504-21472624)
chr4 (12-76)||(42885510-42885576)
chr4 (68-206)||(38464770-38464907)
chr4 (26-75)||(4786296-4786345)
chr4 (14-105)||(28081490-28081582)
chr4 (14-140)||(55793916-55794047)
chr4 (61-207)||(4979914-4980060)
chr4 (60-162)||(9889969-9890071)
chr4 (64-162)||(11494519-11494616)
chr4 (83-209)||(49572919-49573045)
chr4 (15-76)||(243296-243357)
chr4 (61-143)||(15999796-15999878)
chr4 (14-110)||(6178056-6178156)
chr4 (14-110)||(49094111-49094211)
chr4 (19-110)||(41795307-41795402)
chr4 (64-203)||(955726-955865)
chr4 (14-140)||(21017951-21018081)
chr4 (96-203)||(34154434-34154541)
chr4 (84-162)||(1044539-1044617)
chr4 (61-143)||(15995716-15995798)
chr4 (61-143)||(18884501-18884583)
chr4 (61-143)||(19069181-19069263)
chr4 (96-144)||(17139618-17139665)
chr4 (63-163)||(21470877-21470977)
chr4 (61-152)||(16984158-16984249)
chr4 (96-135)||(24417448-24417487)
chr4 (61-200)||(44051089-44051228)
chr4 (61-140)||(48806482-48806561)
chr4 (85-152)||(50274745-50274812)
chr4 (81-163)||(18578623-18578705)
chr4 (96-162)||(37394223-37394289)
chr4 (47-76)||(37865203-37865232)
chr4 (63-120)||(48256567-48256624)
chr4 (68-152)||(6280842-6280926)
chr4 (19-55)||(11287557-11287593)
chr4 (62-138)||(41023385-41023461)
[»] chr7 (37 HSPs)
chr7 (14-200)||(30355189-30355375)
chr7 (12-200)||(46863292-46863480)
chr7 (12-200)||(41047715-41047902)
chr7 (15-200)||(28980123-28980309)
chr7 (12-200)||(42681931-42682119)
chr7 (12-105)||(40587693-40587786)
chr7 (12-76)||(21188374-21188438)
chr7 (62-203)||(9494804-9494945)
chr7 (12-92)||(17838695-17838776)
chr7 (12-92)||(36394886-36394966)
chr7 (67-206)||(36392056-36392195)
chr7 (62-208)||(37340231-37340377)
chr7 (12-76)||(34139932-34139996)
chr7 (96-167)||(45361619-45361690)
chr7 (12-71)||(45364168-45364227)
chr7 (63-200)||(47060864-47061000)
chr7 (123-205)||(10225902-10225985)
chr7 (96-163)||(46860485-46860552)
chr7 (12-77)||(28115480-28115545)
chr7 (16-77)||(43686859-43686920)
chr7 (61-162)||(47776307-47776408)
chr7 (12-68)||(48269710-48269766)
chr7 (96-200)||(48314611-48314714)
chr7 (61-208)||(19044223-19044369)
chr7 (61-208)||(20710267-20710413)
chr7 (83-205)||(10705180-10705302)
chr7 (85-167)||(27453615-27453697)
chr7 (83-200)||(41049208-41049324)
chr7 (14-110)||(9367670-9367770)
chr7 (119-163)||(42684218-42684262)
chr7 (85-200)||(34622436-34622551)
chr7 (82-203)||(36186491-36186611)
chr7 (119-160)||(40590546-40590587)
chr7 (127-200)||(48269618-48269690)
chr7 (127-195)||(10708333-10708401)
chr7 (61-105)||(20353927-20353971)
chr7 (14-50)||(48316259-48316295)
[»] chr1 (60 HSPs)
chr1 (12-200)||(13972001-13972187)
chr1 (63-203)||(29261349-29261488)
chr1 (12-143)||(42572705-42572836)
chr1 (12-77)||(29763167-29763232)
chr1 (12-76)||(27487614-27487678)
chr1 (12-90)||(6434795-6434873)
chr1 (14-200)||(49927451-49927649)
chr1 (12-76)||(14174859-14174923)
chr1 (64-200)||(46141719-46141855)
chr1 (63-203)||(46973138-46973277)
chr1 (12-105)||(13147528-13147621)
chr1 (83-208)||(13173765-13173889)
chr1 (63-162)||(13178131-13178230)
chr1 (12-67)||(26637204-26637259)
chr1 (68-203)||(41804037-41804172)
chr1 (12-162)||(29709259-29709408)
chr1 (64-200)||(18975120-18975256)
chr1 (96-203)||(19053993-19054100)
chr1 (26-77)||(49395663-49395714)
chr1 (12-74)||(49426750-49426813)
chr1 (14-140)||(19159619-19159750)
chr1 (12-76)||(44596896-44596960)
chr1 (67-162)||(23276111-23276206)
chr1 (97-203)||(35521548-35521654)
chr1 (62-162)||(11183161-11183261)
chr1 (63-203)||(21944379-21944519)
chr1 (64-202)||(26633465-26633600)
chr1 (12-160)||(29434950-29435097)
chr1 (12-72)||(51269003-51269063)
chr1 (96-203)||(36908512-36908619)
chr1 (64-207)||(49924786-49924929)
chr1 (83-193)||(25040095-25040205)
chr1 (62-140)||(35258870-35258948)
chr1 (61-162)||(6562158-6562259)
chr1 (67-203)||(19499115-19499249)
chr1 (16-64)||(4208454-4208502)
chr1 (53-140)||(13636111-13636199)
chr1 (64-204)||(36072303-36072442)
chr1 (63-206)||(36076557-36076699)
chr1 (64-151)||(52802116-52802203)
chr1 (96-162)||(27485034-27485100)
chr1 (12-67)||(36908640-36908699)
chr1 (120-202)||(42570077-42570159)
chr1 (61-143)||(44470008-44470090)
chr1 (19-140)||(24364680-24364801)
chr1 (61-162)||(48751407-48751508)
chr1 (61-145)||(15047274-15047358)
chr1 (64-152)||(29438020-29438108)
chr1 (83-143)||(30910022-30910082)
chr1 (61-203)||(38689866-38690007)
chr1 (12-50)||(41779766-41779804)
chr1 (63-137)||(44336249-44336323)
chr1 (64-162)||(51289960-51290058)
chr1 (61-142)||(3941147-3941228)
chr1 (61-162)||(9711648-9711749)
chr1 (61-150)||(23359346-23359435)
chr1 (63-143)||(6557909-6557989)
chr1 (135-203)||(14172048-14172116)
chr1 (61-137)||(45943723-45943799)
chr1 (90-138)||(51337539-51337587)
[»] scaffold0199 (1 HSPs)
scaffold0199 (12-110)||(12335-12434)
[»] scaffold0192 (2 HSPs)
scaffold0192 (12-77)||(18847-18912)
scaffold0192 (109-204)||(16345-16439)
[»] scaffold0176 (1 HSPs)
scaffold0176 (12-76)||(857-921)
[»] scaffold1379 (1 HSPs)
scaffold1379 (61-208)||(431-578)
[»] scaffold0618 (1 HSPs)
scaffold0618 (83-163)||(3860-3939)
[»] scaffold0092 (1 HSPs)
scaffold0092 (61-144)||(54558-54641)
[»] scaffold0341 (1 HSPs)
scaffold0341 (61-162)||(17348-17449)
[»] scaffold0116 (1 HSPs)
scaffold0116 (61-149)||(15952-16040)
[»] scaffold0101 (1 HSPs)
scaffold0101 (20-140)||(36486-36611)
[»] scaffold0388 (1 HSPs)
scaffold0388 (96-203)||(11742-11849)
[»] scaffold0219 (2 HSPs)
scaffold0219 (86-136)||(15704-15754)
scaffold0219 (61-137)||(20109-20185)
[»] scaffold0012 (1 HSPs)
scaffold0012 (85-143)||(232542-232600)
[»] scaffold0494 (1 HSPs)
scaffold0494 (61-162)||(806-907)
[»] scaffold0361 (1 HSPs)
scaffold0361 (61-162)||(4397-4498)
[»] scaffold0201 (1 HSPs)
scaffold0201 (61-150)||(22390-22479)
[»] scaffold0360 (1 HSPs)
scaffold0360 (63-167)||(7303-7407)


Alignment Details
Target: chr2 (Bit Score: 163; Significance: 8e-87; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 341 - 503
Target Start/End: Original strand, 2920735 - 2920897
Alignment:
Q  341 ccccaagtgcattgcagcaaggaaactcactcaattcccagagaaagagagcaaaaataaactgatgatttctctacaaccctataaatcatgtcttcaa 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920735 ccccaagtgcattgcagcaaggaaactcactcaattcccagagaaagagagcaaaaataaactgatgatttctctacaaccctataaatcatgtcttcaa 2920834  T
Q  441 acaacatttgtattcagcccttcaaactttattacaaatcatagacacacacaaacaagcctg 503  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920835 acaacatttgtattcagcccttcaaactttattacaaatcatagacacacacaaacaagcctg 2920897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 122 - 306
Target Start/End: Original strand, 2920515 - 2920700
Alignment:
Q  122 ctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaattaatagagtggg 221  Q
    |||| ||||||||| ||||||  |||||| |||||||||||||||||||||  |||||| ||| |||||||||| |||||||| ||||||||||||||||    
T  2920515 ctcggcagttaactaccgaggttgcaaaatcatattttacttatgtacatcaatcttattaaatgtgtcaacaagaattttcagaaattaatagagtggg 2920614  T
Q  222 ggaaaaa-tgagtcattcccatcaccctcctccacacaaaggtaacagataagtccctcgaccaattccaatctctcacatcaagt 306  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920615 gggaaaactgagtcattcccatcaccctcctccacacaaaggtaacagataagtccctcgaccaattccaatctctcacatcaagt 2920700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 24512292 - 24512141
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||  ||| |  ||||||||| | |||    
T  24512292 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagctggt 24512193  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||| |||| ||| ||||||||||| |||||| | |||||| ||||||||||    
T  24512192 tttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttactt 24512141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 41500184 - 41500332
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  || ||||| |||| | |||||||||| |||| ||    
T  41500184 agatgaataatggatgagagagcttatgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggatt 41500283  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    || ||||  | || |||||||||||||||| |||||| | |||||||||    
T  41500284 ttgaattctttgatagttaactgccgagggggcaaaagcgtattttact 41500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 68 - 203
Target Start/End: Complemental strand, 2917752 - 2917617
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    |||||||||| ||| |||||||||| | |||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgt 2917653  T
Q  168 acatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
     | || | ||||||||| ||||||||||||||||||    
T  2917652 gcctcagccttatgaaatgtgtcaacaacaattttc 2917617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 43491234 - 43491110
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||   | |||||||||||| ||||| |||| |||||    
T  43491234 tgagatgaataatggatgagagagcttctgccagatttataacagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccggt 43491135  T
Q  112 ttttcaatttctcgacagttaactg 136  Q
    | || |||| |||| ||||||||||    
T  43491134 tattaaattcctcggcagttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 2920464 - 2920529
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2920464 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaacta 2920529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 39393162 - 39393065
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||  || ||||| |||||| ||||||| ||||||    
T  39393162 tgagatgaataatggatgagagagcttctatcagatttgtagtagaagatcctcgacagttaactaccgaggtttttctcgacagttaactacatccg 39393065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 45475514 - 45475373
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||| |||||||||  || |||||||||| | |||||||| | ||||||||| ||||||||| ||||||||||||||||| |||||| | |||||||||    
T  45475514 ctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttact 45475415  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttca 204  Q
    | |||   || | ||||||||| ||||||||| |||||||||    
T  45475414 tgtgtgtctcagccttatgaaatgtgtcaacatcaattttca 45475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 40679545 - 40679608
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaac 75  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679545 tgagatgaataatggatgagagaggttcttccagatttgtagcagaagatcctcggcagttaac 40679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 2648242 - 2648092
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||| |||||||  ||  ||||||||| | ||||||| ||| | ||    
T  2648242 tgagatgaataattgatgagagagtttctgccagatttgtagcagaagatcatcggcaattaactaccgagattttcctcggcagttaactacatacagt 2648143  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    | || |||| |||||||  |||||| ||||   | |||||| |||||||||    
T  2648142 tattgaattcctcgacaagtaactgtcgagacggaaaaaacgtattttact 2648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 34638262 - 34638138
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||| || |||||||  || |||||||||| | |||||||| | |||      
T  34638262 tgagatgaataatggatgagagagcttcta---gatttgtagcagaagatcctcgacaattaactaccgaagttttcctcggcagttaactg-aaccgaa 34638167  T
Q  112 ttttcaatttctcgacagttaactgccga 140  Q
    |||  |||| |||| ||||||||||||||    
T  34638166 tttctaattcctcggcagttaactgccga 34638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 19187222 - 19187322
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||| | | |||||||| | || |||| ||||||||| ||||||||||||||||| |||||||| |||||||||    
T  19187222 ctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 19187321  T
Q  163 t 163  Q
    |    
T  19187322 t 19187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 10365746 - 10365840
Alignment:
Q  18 gaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtt 112  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||   | |||||||||| | ||||||| || ||||||    
T  10365746 gaataatggatgagagagcttatgccagatttgtagcaaaagatcctcggcatttaactaccaaggttttcctcggcagttaactacagccggtt 10365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 29093779 - 29093840
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29093779 tgagatgaataat---tgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 29093840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 34918528 - 34918426
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||| ||||||||||||  |||||||||||||| ||||| | || |||||||||||||| ||| | ||||||||| |||||| |||||||| |||| ||    
T  34918528 tcctcagcagttaactatcaatgttttcctcgacagttaattacagccggtttttcaattactcaatagttaactgacgagggggcaaaaacgtattgta 34918429  T
Q  161 ctt 163  Q
    |||    
T  34918428 ctt 34918426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 25184827 - 25184927
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||||||   |||| |||||||||||||||| ||||| |||||||| |||||||    
T  25184827 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttca-aattcctcgacagttaactgctgagggggcaaaaacgtatttta 25184925  T
Q  161 ct 162  Q
    ||    
T  25184926 ct 25184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 34921758 - 34921898
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||  | |||||||||| ||||||||| ||||||||| ||||||||| ||| ||| |||||||| |||||||||    
T  34921758 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttact 34921856  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttca 204  Q
      |||   || | ||||||||| ||||||| | |||||||||    
T  34921857 cgtgtttctctgccttatgaaatgtgtcaatagcaattttca 34921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 8268749 - 8268887
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||||||   || ||||| |||||  ||||| |||| ||| |||||  ||| ||  ||||||||||||||||||  ||||| | |||||||||     
T  8268749 tcggcagttaactgccgaggtttttctcgatagttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttacta 8268848  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
    |||||| || ||||||| ||| |||||||||||||||||    
T  8268849 atgtacgtcagtcttataaaatgtgtcaacaacaatttt 8268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 35493341 - 35493439
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||||||||  ||| ||||||||| | |||||||||| | ||||||| |||| |||| ||||||||| ||||||| |||||| | |||||||||    
T  35493341 tcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttact 35493439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 82259 - 82359
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||| |||||||||||  || |||||||||||| |||||||||| |||| |||  |||| |||||||||||||| |||||| | ||||||| |||||||    
T  82259 tcctcagcagttaactacggaggttttcctcgacagttaactgcagccgg-tttcaaattactcgacagttaactaccgaggaaacaaaaacgtatttta 82357  T
Q  161 ct 162  Q
    ||    
T  82358 ct 82359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 12908428 - 12908505
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    ||||||||||||||||  | |||||||||| | |||||||||| ||  ||||| ||||||||||||||||||||||||    
T  12908428 ctcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccga 12908505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 23409520 - 23409640
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | |||||||||| || |||||| |||| |||| || |||||||||||| | |||||  | |||||||||  ||| |||| | ||||||     
T  23409520 gttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttactagtgtgcatcagccttatgt 23409619  T
Q  183 aacgtgtcaacaacaattttc 203  Q
    |||||||| ||||||||||||    
T  23409620 aacgtgtccacaacaattttc 23409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 34639313 - 34639401
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 151  Q
    ||||||||||||||   ||||||||||||  | |||||||||| |||| |||| ||||||||| |||||| |||||||||| |||||||    
T  34639313 ctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaa 34639401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 45479841 - 45479933
Alignment:
Q  111 tttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    ||||| ||||||||| ||||||||||||||| |||||||| | ||||||||| ||||   |  | ||||||||| ||||||||||||||||||    
T  45479841 ttttttaatttctcggcagttaactgccgagagagcaaaatcgtattttactcatgtttctgagccttatgaaatgtgtcaacaacaattttc 45479933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 1149526 - 1149447
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||| ||||||||||  ||| |||  |||| |||| |||||||||||||||||||||||| | |||||||||    
T  1149526 gttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttact 1149447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 26858238 - 26858175
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaac 75  Q
    ||||||||||||| |||||||||  ||||  || ||||||||||||||||||||||||||||||    
T  26858238 tgagatgaataattgatgagagaatttctgtcacatttgtagcagaagatcctcggcagttaac 26858175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 43943765 - 43943666
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  ||  ||||||||||| |||||||||| |||||| || |||| ||||| |||||||||| ||||| | |||| | |||||||    
T  43943765 tcctcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtatttta 43943666  T

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Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 41181492 - 41181374
Alignment:
Q  82 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 181  Q
    ||||||||||| | ||||| || | |||||| || |||| |||| ||||||||||||||||| |||||||| |||||||||  ||| | || | ||||||    
T  41181492 tgttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatg 41181393  T
Q  182 aaacgtgtcaacaacaatt 200  Q
     || ||||||||| |||||    
T  41181392 caatgtgtcaacatcaatt 41181374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 16580611 - 16580559
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcct 64  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||| |||||    
T  16580611 tgagatgaataatggatgagagaacttttgccagatttgtagcagaaaatcct 16580559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 17424216 - 17424128
Alignment:
Q  53 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| |||| |||| |||  | ||| ||||||||||||||    
T  17424216 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccga 17424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 12905590 - 12905543
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  12905590 gttaactgcagccgatttttcaatttctcggcagttaactgccgaggg 12905543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 28342575 - 28342460
Alignment:
Q  85 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaa 184  Q
    |||||||| | ||||| |||| ||||||||| ||||  |||||||||||||||||| || |||||||| ||  ||||||||||   |  | |||||| ||    
T  28342575 tttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattacttatgtgtcttagccttatgcaa 28342476  T
Q  185 cgtgtcaacaacaatt 200  Q
     |||||||||||||||    
T  28342475 tgtgtcaacaacaatt 28342460  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 1101072 - 1101150
Alignment:
Q  84 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||| | ||||||| || |||| |||  ||||  ||| |||||||||||||||||||||||| |||||||||||    
T  1101072 ttttcctcggcagttaactacagccggatttcaaattcatcggcagttaactgccgagggagcaaaatcatattttact 1101150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 3795413 - 3795331
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||||||||||    | |||||||||| | |||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  3795413 tcctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggg 3795331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 40156475 - 40156393
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||| | || |||||||||| | |||||||||| ||||||||||||  | ||| || ||||||| ||||||    
T  40156475 tcctcggcagttaactgtcgaagttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggg 40156393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 19186788 - 19186683
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||| ||||| |||| |||| ||||| |||||||| || | |||||| |||||||||| |||   || | ||||||| | ||||||||||    
T  19186788 gttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagccttatgatatgtgtcaacaa 19186689  T
Q  196 caattt 201  Q
    ||||||    
T  19186688 caattt 19186683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 43982326 - 43982226
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  |||||| |||||||||||||||||  || |||||||||| | |||||||||| |||    
T  43982326 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 43982227  T
Q  110 g 110  Q
    |    
T  43982226 g 43982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 24601715 - 24601636
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||||||  || | ||||||||   |||||||||| || |||||| |||| |||||||||||||| ||||    
T  24601715 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 24612399 - 24612478
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||||||  || | ||||||||   |||||||||| || |||||| |||| |||||||||||||| ||||    
T  24612399 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24612478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 29407884 - 29407967
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 144  Q
    ||||||||||||||||   || ||||||||||   |||||||||| |||||| || ||  | ||||||||||||||||||||||    
T  29407884 tcctcggcagttaactgccgaagttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgaggga 29407967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 41053690 - 41053756
Alignment:
Q  86 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||||| | |||||||||| ||||||| | ||||||| |||||||||||| |||||  ||||||||    
T  41053690 ttcctcgccagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaac 41053756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 45137433 - 45137531
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||||||||| || |||||| ||| | |||||||||| |||  |||| |||| |||| || ||||||||| |||  |||||| | |||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttact 45137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 2648853 - 2648776
Alignment:
Q  82 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 159  Q
    |||||||||||   |||||||||| ||||||||| |||| || | ||||||||||||||| | |||||| | ||||||    
T  2648853 tgttttcctcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtatttt 2648776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 27276371 - 27276472
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||||| ||||||   || |||||||||| | |||||||||| |||| |||  |||| |||  ||||||||||||||||| | |||| | |||||||    
T  27276371 tcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatttta 27276470  T
Q  161 ct 162  Q
    ||    
T  27276471 ct 27276472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 23786154 - 23786094
Alignment:
Q  107 ccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    |||| |||| |||| |||| |||||||||||||||||  ||||| ||||||||||| ||||    
T  23786154 ccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattttactaatgt 23786094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 36255732 - 36255788
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccg 139  Q
    |||||||||| | |||||||||| |||  |||| |||| ||||||||||||||||||    
T  36255732 gttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccg 36255788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 41053565 - 41053617
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    |||||||||||||||||  |||| |||||||| | |||||||||| |||||||    
T  41053565 tcctcggcagttaactaccgatgatttcctcgccagttaactgcagccggttt 41053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 43493320 - 43493356
Alignment:
Q  127 cagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  43493320 cagttaactgccgagggggcaaaaacgtattttactt 43493356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 18307379 - 18307229
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | ||||||| || ||| |    
T  18307379 tgagatgaataatggatgagagggcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgat 18307280  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||| |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  18307279 tttttaattcctcgacagttaactgccgaaggagcaaaaacgtattttact 18307229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 20192464 - 20192284
Alignment:
Q  26 gatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcg 125  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||||| | |||||||||| ||| || || ||||  ||     
T  20192464 gatgagagagcttctgccagatttgtagcagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttca 20192365  T
Q  126 acagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 206  Q
     |||||||||| ||| || |||||| | |||||||||| ||| | || | ||||||||| ||||||||||||||| |||||    
T  20192364 gcagttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattctcaaa 20192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 3600462 - 3600273
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||| |||| ||| |||||  |||||||||||||||||||||||||| ||||||||| || |||||||| | | |||||||||| | |||    
T  3600462 tgagatgaataatgcatgaaagaacttctgtcagatttgtagcagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagctggt 3600363  T
Q  112 t-tttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    | ||  ||||  ||| ||||||||||||||||| ||||||||||||||||||| |||   ||    |||||||| |||||||||||||||    
T  3600362 tattataattattcggcagttaactgccgagggggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtcaacaacaatt 3600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 542738 - 542866
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||   |||||||| | |||| ||||| ||||     
T  542738 tgagatgaataatggatgagagaacttctgccagatttgtagcagaagatcctcggcagttaactaccgagagtttcctcggcagttagctgcagccgga 542837  T
Q  112 ttttcaatttctcgacagttaactgccga 140  Q
    |||  |||| |||||||||||||||||||    
T  542838 tttctaattcctcgacagttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 18538334 - 18538474
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||| |||| ||||||| |||||||||||||| |||||| | |||||||||    
T  18538334 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttact 18538433  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    | ||| | || | || |||||| ||||||||||||||||||    
T  18538434 tgtgtgcctcagcctaatgaaatgtgtcaacaacaattttc 18538474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 25497636 - 25497520
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||  ||  ||||||||| | |||||||||| ||  |    
T  25497636 tgagatgaataatggatgagagagcttctgcctgatttgtagcagaagattctcggcagttaactaccgagattttcctcggcagttaactgcagccaat 25497537  T
Q  112 ttttcaatttctcgaca 128  Q
    |||| |||| |||||||    
T  25497536 ttttgaattcctcgaca 25497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 34682311 - 34682191
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | |||||||||| ||||||||| |||| ||||||||||||||| | ||||||||||| | |||||||||| || || || | |||||||    
T  34682311 gttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatga 34682212  T
Q  183 aacgtgtcaacaacaattttc 203  Q
    || ||||||||||||||||||    
T  34682211 aatgtgtcaacaacaattttc 34682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 3603148 - 3603290
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || ||||||||||   |||||||||| || ||| || ||||  ||| |||||||||| ||||||||||||||| ||||||||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttactt 3603247  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 206  Q
    |||| | || | |||||| || ||||||||||||||| |||||    
T  3603248 atgtgcctcagccttatgcaatgtgtcaacaacaattctcaaa 3603290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 11346133 - 11346039
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||  || |||||||||| | ||||||||||    
T  11346133 tgagatgaataatggatgagaggagattctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgca 11346039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 42865754 - 42865816
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  42865754 agatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcaattaact 42865816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 20200148 - 20200284
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  ||||||||||||| | ||||||||||   |||| || ||||||| |||||||||||||||| || |||||||| ||||||| ||    
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttattt 20200247  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
     ||| | || | |||||| || |||||||||||||||    
T  20200248 gtgtgcctcagccttatgcaatgtgtcaacaacaatt 20200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 35564386 - 35564321
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  35564386 tgaggtgaataatggatgagagagcttatgccagatttgtagcagaagatcctcagcagttaacta 35564321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 34123933 - 34124033
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||||||||||||||  || |||||||| | | |||||||||| |||| |||  ||||||||||||||||||||||||||| |||||| | ||||||||    
T  34123933 cctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttac 34124032  T
Q  162 t 162  Q
    |    
T  34124033 t 34124033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 38968170 - 38968065
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||||||||||||||| || |||||||||| | |||||||||| |||| ||||  ||| ||||  |||||||| |||| ||| ||||||| ||||||||    
T  38968170 cctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgtattttac 38968071  T
Q  162 ttatgt 167  Q
    ||||||    
T  38968070 ttatgt 38968065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 25499887 - 25500030
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||| ||||||| | | |||||||||| | |||||| ||| ||||||||| |||| ||||| |||||||||||||||| |||||| | ||||||||||    
T  25499887 tcggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttactt 25499986  T
Q  164 atgt--acatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
     |||   | || | |||||| || ||||||||| ||||||||||    
T  25499987 gtgttcgcctcagccttatgtaatgtgtcaacaccaattttcaa 25500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 1398673 - 1398534
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    ||||||||||  || |||||||| | |||||||||||| |||||| || |||| |||| |||||||||| ||| |||||||||   |||||||||| |||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgt 1398574  T
Q  168 acatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
       ||   |||||| || ||||||||||||||||||||||    
T  1398573 gtctcaaccttatgtaatgtgtcaacaacaattttcaaaa 1398534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 35567059 - 35567166
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||||| ||   ||| |||||||||||||||||||| ||||||||||||||||||||| ||| | || | || |||||| ||||||||      
T  35567059 gttaactgcaaccggtattaacattcctcgacagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcctgatgaaatgtgtcaacgg 35567158  T
Q  196 caattttc 203  Q
    ||||||||    
T  35567159 caattttc 35567166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 8537291 - 8537225
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    |||||||||||||||||||||| || ||||  |||||||||||||||| ||||||||||||||||||    
T  8537291 tgagatgaataatggatgagaggagattctggcagatttgtagcagaacatcctcggcagttaacta 8537225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Original strand, 18310053 - 18310157
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    ||||||||||  ||||| || |||| |||||||||||||||| ||||  |||||||| |||||||||| ||| | || | |||||| || ||||||||||    
T  18310053 gttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaacaa 18310152  T
Q  196 caatt 200  Q
    |||||    
T  18310153 caatt 18310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 19228678 - 19228786
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||||||||||||| ||||  ||| ||||||||||||||||| |||   || |||||||||| |||   || | ||||| ||| ||||||||||    
T  19228678 gttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtgtcaacaa 19228777  T
Q  196 caattttca 204  Q
    |||||||||    
T  19228778 caattttca 19228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 33993354 - 33993255
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || ||||| | || | ||||||| || ||||||||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||    
T  33993354 ctcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttact 33993255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 33995145 - 33995227
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||||||||||   || |||||||||| | ||||| |||||||| ||||| ||||||||| |||||||||| ||||||    
T  33995145 tcctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggg 33995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 167
Target Start/End: Complemental strand, 34122600 - 34122494
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  ||  ||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||| || |||||| | |||||||    
T  34122600 tcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtatttta 34122501  T
Q  161 cttatgt 167  Q
    || ||||    
T  34122500 ctaatgt 34122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 19037416 - 19037516
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| |||    
T  19037416 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 19037515  T
Q  110 g 110  Q
    |    
T  19037516 g 19037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 24053235 - 24053114
Alignment:
Q  82 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 181  Q
    |||||| |||| | ||||||||||  |||||||| |||| |||| || |||||||||||| || ||||||| ||||||| ||||||   |||  |||||     
T  24053235 tgtttttctcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatc 24053136  T
Q  182 aaacgtgtcaacaacaattttc 203  Q
    | | ||||||||||||||||||    
T  24053135 atatgtgtcaacaacaattttc 24053114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 30354400 - 30354465
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaa 133  Q
    ||||||||||  || |||||||||||| |||||||||| || |||||| |||||||||||||||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgcaaccagtttttgaatttctcgacagttaa 30354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 8702196 - 8702303
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||| ||||||||||  || |||||||||  | ||||||||||  | | |||| |||| |||| |||||||||| ||||||||||||| | ||||||||    
T  8702196 cctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtattttac 8702295  T
Q  162 ttatgtac 169  Q
    || |||||    
T  8702296 ttgtgtac 8702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 17965925 - 17965843
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||| |||||||  ||||||||||||| | ||||||||||  ||  |||| |||| ||||||| ||||||||||||||    
T  17965925 tcctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggg 17965843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 200
Target Start/End: Original strand, 42539375 - 42539509
Alignment:
Q  66 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 165  Q
    ||||||||||||   | |||||||||| | |||||||||| |||  |||| |||||||||||||||| || || | || |||||||| ||||||||| ||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgtattttactcat 42539474  T
Q  166 gtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    ||  ||| |||| |  ||| ||||||||| |||||    
T  42539475 gtgtatcagtctaaccaaatgtgtcaacatcaatt 42539509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 17966883 - 17966984
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||| |||||||||||  ||  |||||||||   ||||||||||  ||| |||| ||||||||| ||||||||||||||||| | |||| | |||||||    
T  17966883 tcctcagcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtatttta 17966982  T
Q  161 ct 162  Q
    ||    
T  17966983 ct 17966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 41798894 - 41798793
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||| ||||||  || |||||| ||| | |||||||||| |||| |||  ||||  ||  ||||||||||||||||| |||||| |||||||||    
T  41798894 tcctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatatttta 41798795  T
Q  161 ct 162  Q
    ||    
T  41798794 ct 41798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 42865811 - 42865876
Alignment:
Q  97 ttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||| ||||||||| ||||  ||| | ||||||||||||||||| |||||| |||||||||    
T  42865811 ttaactgcaaccggtttttgaattcttcgtcggttaactgccgagggagaaaaaacttattttact 42865876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 1401388 - 1401428
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgta 52  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  1401388 tgagatgaataatggatgagagagcttctgctagatttgta 1401428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 30709030 - 30708899
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtagc--agaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| |||||  | ||||||||||||||||||||   || |||| ||||| | |||||||||| |||    
T  30709030 agatcaataatggatgagaggagattctgccagattttgtagcgcataagatcctcggcagttaactcccgaggtttccctcggcagttaactgcagccg 30708931  T
Q  110 g-tttttcaatttctcgacagttaactgccga 140  Q
    | ||||||||  | ||| ||||||||||||||    
T  30708930 gatttttcaaaatttcggcagttaactgccga 30708899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 7994 - 8088
Alignment:
Q  14 agatgaataatggatgaga-gagcttctaccagatttgta--gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||| || ||| |||| |||||||||||  |||| |||||||||| |||||||||  ||  ||||||||| | ||||||||||    
T  7994 agatgaataatggatgtgaggagattctgccagatttgtagcgcaggagatcctcggtagttaactaccgagattttcctcggcagttaactgca 8088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 30192568 - 30192489
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    ||||||||||||||||   || |||||||||||| |||||||||| |||||| || ||  | ||| ||||||||||||||    
T  30192568 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccga 30192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 28388519 - 28388605
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 150  Q
    ||||||||||||||  || |||||||||| | |||||||||| | || |||  |||| |||| ||| ||||||||||||| ||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaa 28388605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 7762241 - 7762285
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||||    
T  7762241 tcctcggcagttaactcctgaggttttcctcgacagttaactgca 7762285  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 28880443 - 28880316
Alignment:
Q  20 ataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttt 114  Q
    |||||||||||||| || |||| |||||||| ||||  || |||||||||||||||||| ||  || |||||||||| | |||  ||||| |||| ||||    
T  28880443 ataatggatgagaggagattctgccagattttgtagggcataagatcctcggcagttaattaccgaggttttcctcggcagtttgctgcagccggatttt 28880344  T
Q  115 tcaatttctcgacagttaactgccgagg 142  Q
    ||||  | ||| ||||||||||||||||    
T  28880343 tcaaaatttcggcagttaactgccgagg 28880316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 18441389 - 18441577
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||   || ||||| |||| | ||||||| ||  ||||    
T  18441389 tgagatgaataatggatgagagagtttctgccagatttgtagcagaagatcctcggcagttaactgccgaggtttttctcggcagttaactacaatcggt 18441488  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    | || ||||||||| ||||||||||||||||| |||||||| |||||||||| |||   || | ||||||||| |||||||||||||||    
T  18441489 tattgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaatt 18441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 41858073 - 41858264
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||   || |  ||||||| | |||||||||| |||||||    
T  41858073 agatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcgacagttaactcccgagg--ttcctcggcagttaactgcagccggttt 41858170  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
    || ||||  ||| ||||||||||||||||| |||||||| |||||||||  |||   || | | ||||||| ||||||||||||||| ||||||    
T  41858171 ttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacaacaattctcaaaa 41858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 42602583 - 42602395
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||| | ||| |  |||||||||| ||||||||||||||||||||||||  || |||||||||| | ||||||||||||||||||    
T  42602583 agatgaataatggatgagacaacttatgtcagatttgtatcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggttt 42602484  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
    || ||||  ||| ||||||||||||||  || ||||||  |||||||||  |||   || | | |||||||||||||||||||| ||||    
T  42602483 ttgaattcttcggcagttaactgccgatagaacaaaaatgtattttactcgtgtttctcagccatatgaaacgtgtcaacaacattttt 42602395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 26451601 - 26451515
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaact 102  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | |||||||    
T  26451601 atgaataatagatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaact 26451515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 3395991 - 3395927
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  3395991 tgagatgaataatggatgagagagtttctgccatatttgtagcagaagatcctcggcagttaact 3395927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 18438707 - 18438571
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||||||   || |||||||||| | |||||||||| |||||| || |||| ||| ||||||||||||||| || |||||| | ||||||||||    
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttactt 18438608  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
     ||| |||| | |||||| || |||||||||||||||    
T  18438607 gtgtgcatcagccttatgcaatgtgtcaacaacaatt 18438571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 41274717 - 41274652
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||||||    
T  41274717 tgagatgaataatggatgagagagcttctgccagatttatagtagaagattctcggcagttaacta 41274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 22547568 - 22547504
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  22547568 tgagatgaataattgatgagagagcttctgccagatttgtagtagaagatcctcggtagttaact 22547504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 41855442 - 41855306
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||| |||||||||  || |||||||||| | |||||||||| ||| ||||| ||||  ||||||||||||||||||||  |||||||| |||||||||    
T  41855442 ctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttact 41855343  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaat 199  Q
     ||||   || | | ||||||| ||||||||||||||    
T  41855342 catgtttctcagccatatgaaatgtgtcaacaacaat 41855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 7168142 - 7168022
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | |||||||||| ||||||||| ||||  ||| ||| |||| | |||||| |||||| | |||||||||| ||| | || | |||||||    
T  7168142 gttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatga 7168043  T
Q  183 aacgtgtcaacaacaattttc 203  Q
    || ||||||||||||||||||    
T  7168042 aatgtgtcaacaacaattttc 7168022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 155
Target Start/End: Original strand, 42605234 - 42605325
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacata 155  Q
    ||||||||||||||  ||||||||| ||| | |||||||||| ||| ||||| ||||  ||||||||||||||||||||| | |||||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaaacata 42605325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 22577739 - 22577601
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||||| |||||||||| ||  ||||| |||| |||  || ||||||||||||||| ||||||| ||||||| |    
T  22577739 ctcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttatt 22577640  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattt 201  Q
    | |||  ||| | ||| ||||| || |||||||| ||||    
T  22577639 tgtgtgtatctgccttgtgaaatgtatcaacaacgattt 22577601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 1114818 - 1114718
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||||||||||||||  || | |||||||| | |||||||||| |||| |||  ||||||||| ||||||||||||||||| | |||| | ||||||||    
T  1114818 cctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttac 1114719  T
Q  162 t 162  Q
    |    
T  1114718 t 1114718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 34823014 - 34823093
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgag 141  Q
    ||||||||||||||||  || ||||||||||||  ||||||||| |||  |||| |||| ||||||||||||||||||||    
T  34823014 cctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgag 34823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 167
Target Start/End: Complemental strand, 35962383 - 35962277
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||||||||||||   || |||||||||| | |||||||| | |||| |||  |||| |||||||||||||||||||| | |||||| | |||||||    
T  35962383 tcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtatttta 35962284  T
Q  161 cttatgt 167  Q
    || ||||    
T  35962283 ctaatgt 35962277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 38871884 - 38871834
Alignment:
Q  26 gatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  38871884 gatgagagagctcctgccagatttgtagcagaagatccttggcagttaact 38871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 3395918 - 3395825
Alignment:
Q  111 tttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttca 204  Q
    ||||| |||| |||| ||||||||||| ||||| ||||||||||||||||||| ||| | ||   ||||||||| ||||||| | |||||||||    
T  3395918 tttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatgtgtcaagagcaattttca 3395825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 4866475 - 4866427
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 144  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  4866475 gttaactgcagccggtttttgaatttcttgacagttaactgccgaggga 4866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 18205860 - 18205761
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||| | | |||||||||| ||||||||| ||||  ||| |||||||| |||||||  | |||||| |||||||||    
T  18205860 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtattttact 18205761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24860507 - 24860448
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagt 71  Q
    ||||||||||||| |||||||||||||||  || |||| ||||||||||||||| |||||    
T  24860507 tgagatgaataatagatgagagagcttctgtcaaatttatagcagaagatcctccgcagt 24860448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 37779773 - 37779713
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||  |||||  |||||||||||||||| ||||||| |||||||||    
T  37779773 agatgaataatggatgagag--cttctgtcagatttgtagcagaatatcctcgacagttaact 37779713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 21406343 - 21406261
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || ||||||||||   |||||||||| ||||||| | |||| |||| ||||||||||| |||||    
T  21406343 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggg 21406261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 21800835 - 21800753
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || ||||||||||   |||||||||| ||||||| | |||| |||| ||||||||||| |||||    
T  21800835 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggg 21800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 7172606 - 7172690
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    ||||| |||| | ||||| |||| ||||||||  ||||||||| ||||||||||  || || |||||||| ||||||||||||||    
T  7172606 gtttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgtattttacttatgt 7172690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 28168658 - 28168698
Alignment:
Q  123 tcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  28168658 tcgacagttaactgccgaggaggcaaaaacatattttactt 28168698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 45454457 - 45454381
Alignment:
Q  86 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||| | ||||||||||||||| |||  |||| |||| ||||||||||||||||  |||||| | |||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttact 45454381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 15033095 - 15033160
Alignment:
Q  14 agatgaataatggatgaga-gagcttctaccagatttgtag--cagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||| ||| |||| ||||||||||||  ||| ||||||||||||||||||||    
T  15033095 agatgaataatggatgagaggagattctgccagatttgtaggtcag-agatcctcggcagttaacta 15033160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 21835176 - 21835258
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||| ||  || ||||||||||   |||||||||| ||||||| | |||| ||||||| |||||||| |||||    
T  21835176 tcctcggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactgcagaggg 21835258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 40077248 - 40077386
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||||||||||||||  || |||||||||| | ||||||||||  ||| |||| |||  || ||||||| || |  ||||| |||||||| ||||||||    
T  40077248 cctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttac 40077347  T
Q  162 ttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |  |||   || | ||||| ||| |||||||||||||||    
T  40077348 tcgtgtttctcagccttatcaaatgtgtcaacaacaatt 40077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 7121783 - 7121863
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgag 141  Q
    ||||||||||||||||   || |||||||||  | |||||||||| |||||| || ||  | |||||||||||||||||||    
T  7121783 tcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgag 7121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 41803121 - 41802973
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||| | |||||||||| |||||||    
T  41803121 agatgaataatggatgagagagcttctgccagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggttt 41803022  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    || ||||  ||| ||||||||||||||| | |||||||| |||||||||    
T  41803021 ttaaattcttcggcagttaactgccgagtgggcaaaaacgtattttact 41802973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 34694382 - 34694513
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   || ||||| |||| | ||| |||||| ||||     
T  34694382 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgcagccgga 34694481  T
Q  112 ttttcaatttctcgacagttaactgccgaggg 143  Q
    |||  |||| ||||||||||||||||||||||    
T  34694482 tttctaattcctcgacagttaactgccgaggg 34694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 45101796 - 45101987
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||   | |    ||||| | |||||||||| |||||    
T  45101796 tgagatgaataatatatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggt 45101895  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |||| |||| ||| ||| ||||||||||||||   |||||| |||||||||||||| | ||   ||||||||| ||||| ||||||||||||    
T  45101896 ttttgaattcctcaacaattaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 45101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 51402348 - 51402496
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||| ||  || |||    
T  51402348 agatgaataatggatgagagagcttctgacagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcgacagttaactacaatcgattt 51402447  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    || ||||  ||  || |||||||| |||| ||||||||| |||||||||    
T  51402448 ttgaattattctgcaattaactgctgaggaagcaaaaacgtattttact 51402496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 55207613 - 55207749
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   | ||| |||| | | |||||||||| |||||||    
T  55207613 agatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggttt 55207712  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaa 150  Q
    || ||||  ||| |||||||||||||| || ||||||    
T  55207713 ttgaattcttcggcagttaactgccgatggggcaaaa 55207749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 13896824 - 13896974
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||  || |||||||||||| |||||||||| || ||    
T  13896824 tgagatgaataatggatgagagagcttctgccagatttgtagtagaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagccagt 13896923  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    | || ||||  ||  || |||||||||||||   |||||||||||||||||    
T  13896924 tattaaattcttcagcaattaactgccgaggagtcaaaaacatattttact 13896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 208
Target Start/End: Complemental strand, 29929500 - 29929355
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||| || |||||||||| | ||||| |||| ||||||||| |||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  29929500 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29929401  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    | ||| | || | ||||| ||| |||||||||||||||||| ||||    
T  29929400 tgtgtgcctcagccttataaaatgtgtcaacaacaattttctaaaa 29929355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 208
Target Start/End: Complemental strand, 29978654 - 29978509
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||| || |||||||||| | ||||| |||| ||||||||| |||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  29978654 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29978555  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    | ||| | || | ||||| ||| |||||||||||||||||| ||||    
T  29978554 tgtgtgcctcagccttataaaatgtgtcaacaacaattttctaaaa 29978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 41577200 - 41577012
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||  || |||||  ||||| |||||||||| ||| |    
T  41577200 tgagatggataatggatgagagagcttctgcaagatttgtagcagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgat 41577101  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |||| ||||  |||||||||||||| |||    |||||||| ||||||| || | |   || | ||||||||| |||||||||||||||    
T  41577100 tttttaattcatcgacagttaactgtcgaaaaggcaaaaacgtattttatttgtatttctcagccttatgaaatgtgtcaacaacaatt 41577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 55385262 - 55385122
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  || |||||||||| | |||||||||| ||||     
T  55385262 tgagattaataatggatgagagagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagccgga 55385163  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||  ||    ||| ||||||||||||||||| ||||||||    
T  55385162 tttctaaaacttcggcagttaactgccgagggggcaaaaac 55385122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 43476317 - 43476176
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||  || |||||||||| | |||||||||| ||||     
T  43476317 tgagatgaataatggatgagagagcttctgtcagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgga 43476218  T
Q  112 ttttc-aatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||| ||    ||| ||||||||| ||||||| ||||||||    
T  43476217 ttttctaaaacttcggcagttaacttccgagggggcaaaaac 43476176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 52570514 - 52570661
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||||  || ||||| ||||   ||||||||||  ||||    
T  52570514 tgagatgaataatgaatgagagagtttctgccagatttgtagtagaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggt 52570613  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||| ||||  ||| ||||||||||||||||| | |||||| |||||||    
T  52570614 ttttgaattcttcggcagttaactgccgaggg-gaaaaaacgtatttta 52570661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 41137829 - 41137693
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttttt 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||          ||||||||||| | |||||||||| |||| |||     
T  41137829 atgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggtagt----------tgttttcctcggcagttaactgcagccggatttc 41137740  T
Q  116 caatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
     |||| |||| ||||||||||| || |||||||||||||||||||||    
T  41137739 aaattcctcggcagttaactgctgatggagcaaaaacatattttact 41137693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 28611099 - 28611238
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  | ||||||||||| | |||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  28611099 ctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttact 28611198  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
    | |||   || | ||||||||| |||| || |||||||||    
T  28611199 tgtgtgtctcagccttatgaaatgtgtaaagaacaatttt 28611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 51696522 - 51696587
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  51696522 tgagatgaataatggatgagagagcttctgccagatttgcagcagaagatcctcggcagttaacta 51696587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 19454299 - 19454363
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19454299 tgagatgaataatggatgagagagcttctgccagatttgtagtagaagatcctcggcagttaact 19454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 24703374 - 24703460
Alignment:
Q  23 atggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||| | |||||||| | ||||||||||||||    
T  24703374 atggatgagagagcttctgccagatttgtagcagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgcatccg 24703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 49219739 - 49219869
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||||||| ||||||||||  || |||||||||||||||||||||  |||||||||   | |||||||||| | |||||||||| ||||     
T  49219739 tgagatgaataatggatgggagagcttctgtcaaatttgtagcagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgcagccgga 49219838  T
Q  112 ttttcaatttctcgacagttaactgccgagg 142  Q
    |||  |||| |||| ||||||||| ||||||    
T  49219839 tttctaattcctcggcagttaactaccgagg 49219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 29918340 - 29918485
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||  ||||  ||| ||||||| |||||||||  ||||| | |||||||||    
T  29918340 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttact 29918439  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    ||||| | || | |||||||||  ||||||||||||||||| ||||    
T  29918440 tatgtgcctcagccttatgaaatatgtcaacaacaattttctaaaa 29918485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 63 - 208
Target Start/End: Original strand, 29967493 - 29967638
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||  ||||  ||| ||||||| |||||||||  ||||| | |||||||||    
T  29967493 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttact 29967592  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    ||||| | || | |||||||||  ||||||||||||||||| ||||    
T  29967593 tatgtgcctcagccttatgaaatatgtcaacaacaattttctaaaa 29967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 41579724 - 41579865
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||||| || |||| |||  || |||||||||||||| | |||| | ||||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttactt 41579823  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
    |||| | || | |||||| |||||||||||||||||| ||||    
T  41579824 atgtgcctcagccttatgcaacgtgtcaacaacaattctcaa 41579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 42756233 - 42756129
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||| | || |||||||||| | |||||||||| |||| |||| |||| |||||||||||||||| ||||| |||||||| |||||||||    
T  42756233 ctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttact 42756134  T
Q  163 tatgt 167  Q
     ||||    
T  42756133 catgt 42756129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 46347672 - 46347791
Alignment:
Q  15 gatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttt 114  Q
    |||||| |||||||||||||| |||| || |||||||||||||||||| ||| ||||||| ||| || |||||||||| | |||||||||| ||| || |    
T  46347672 gatgaacaatggatgagagagtttctccctgatttgtagcagaagatcttcgacagttaattatcgaggttttcctcggcagttaactgcagccgattat 46347771  T
Q  115 tcaatttctcgacagttaact 135  Q
    | ||||| |||||||||||||    
T  46347772 tgaattt-tcgacagttaact 46347791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 4004750 - 4004849
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 110  Q
    |||||||||||||||||||||| || |||| |||| |||||||||||||||||||||||||||| ||  || |||||||||| | |||||||||| ||||    
T  4004750 tgagatgaataatggatgagaggagattctgccaggtttgtagcagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgcagccgg 4004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 7245217 - 7245155
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  7245217 tgagatgaataatggatgagagagcttctgtcagatttgtagcagaagatactcggcagttaa 7245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 36134449 - 36134355
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    ||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||   || |||||||||| | ||||||||||    
T  36134449 tgagatgaataatggataagaggagattctgccagatttgtagcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgca 36134355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 49609508 - 49609370
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||| || ||||||||| | |||||||||||||||||| |||||||||||||||||  || ||||| ||||||  ||||||||  |||      
T  49609508 tgagatgaataatgaataagagagcttatgccagatttgtagcagaagttcctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaa 49609409  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaa 150  Q
    |||  |||| ||||||| ||||||  ||| |||||||||    
T  49609408 tttcaaattcctcgacaattaactatcgaaggagcaaaa 49609370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 2432943 - 2433084
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||   | |||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||   |||| | |||||||||     
T  2432943 tcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactc 2433042  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
     ||| | || | |||||| || ||||||||||||||| ||||    
T  2433043 gtgtgcctcagccttatgcaatgtgtcaacaacaattctcaa 2433084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 43568991 - 43568926
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||||||||    
T  43568991 tgagatgaataatggatgagagagcttctgtcagatttgtaacagaagatcctcagcagttaacta 43568926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 30256006 - 30256146
Alignment:
Q  67 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 166  Q
    |||||||||||| || |||||||||| | |||||||||| ||||||||| |||| |||| ||||||||| || |||| |||   |  |||||||||| ||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtg 30256105  T
Q  167 tacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
    | | || |  |||||||| ||||||||||||||||||||||    
T  30256106 tgcctcagctttatgaaatgtgtcaacaacaattttcaaaa 30256146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 46344991 - 46344911
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||| | |||||||||| ||| ||||| |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  46344991 gttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttactt 46344911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 2271260 - 2271325
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||||||    
T  2271260 tgagatgaattatggatgagaggagattctgccagatttgtagcagaagatcctcggcagttaact 2271325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 43571717 - 43571824
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| |||  |||| |||| |||  ||||||||||||||||| ||||||||||||||||||| ||||| |    |||||| || ||||||||||    
T  43571717 gttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtcaacaa 43571816  T
Q  196 caattttc 203  Q
    ||||||||    
T  43571817 caattttc 43571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 34648150 - 34648283
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccaga--tttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||| ||||||||| ||| || |||   || ||||||||||   |||||||||| |||    
T  34648150 tgagatgaataatggatgagagagcttctgccagaattttgtagcataagatcctcagcaatttactgccgaggttttcctcggtcgttaactgcagccg 34648249  T
Q  110 gtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||  |    |||||||||||||||| |||||    
T  34648250 gttttgaagaaactcgacagttaactgctgaggg 34648283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 2647648 - 2647776
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg- 110  Q
    |||||||||||||||||||| |  |||| |||||||| |||| || ||||||||||||||||||||  || |||||||||| | |||||||||| ||||     
T  2647648 agatgaataatggatgagaggaaattctgccagattttgtag-agcagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgga 2647746  T
Q  111 tttttcaatttctcgacagttaactgccga 140  Q
    ||||||||  | ||| ||||||||||||||    
T  2647747 tttttcaaaatttcggcagttaactgccga 2647776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 34691701 - 34691620
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 142  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||| |||| | || |||| ||||||||||||||||    
T  34691701 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgagg 34691620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 7247864 - 7247956
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||||||  || |||||||||| | |||||||||| |||||| || |||| |||| ||||||||||||||||| |||||| | |||||||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtatttta 7247956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 49268845 - 49268943
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||||||||  ||||||||||||| | |||||||||| |||| |||| |||| ||| ||||||||| || || ||  ||||| |||||||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaatcatattttact 49268943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 41805694 - 41805811
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | ||||| |||| ||||| ||| ||||  |||||||||||||||||||| ||||||||| ||  |||||| ||| | || | ||||||     
T  41805694 gttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagccttatgc 41805793  T
Q  183 aacgtgtcaacaacaatt 200  Q
    || |||||| ||||||||    
T  41805794 aatgtgtcatcaacaatt 41805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 49140793 - 49140893
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  |||||| ||||||||||||||||| ||| |||||||||| | |||||||||| |||    
T  49140793 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagttcctcggcagttaactactgaggttttcctcggcagttaactgcagccg 49140892  T
Q  110 g 110  Q
    |    
T  49140893 g 49140893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 7839531 - 7839587
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||||| ||||||||| |||| |||||||||| ||||||||||| ||||||||    
T  7839531 gttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaac 7839587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 42807658 - 42807738
Alignment:
Q  122 ctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
    |||||||||||||||||||||  |||||||  ||||||| || ||| |||| | ||||||||| |||| ||||||||||||    
T  42807658 ctcgacagttaactgccgaggaggcaaaaatgtattttatttgtgtgcatcagccttatgaaatgtgttaacaacaatttt 42807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 49196447 - 49196547
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||| ||||||||||| |  ||||||||||   |||||||||| |||| |||| |||| ||||||||||| ||  |||||| |||||||| ||||||||    
T  49196447 cctcgacagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttac 49196546  T
Q  162 t 162  Q
    |    
T  49196547 t 49196547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 32593109 - 32593188
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||||||| || ||||||||||   |||||||||| |||||| || ||  | ||||||||||||||||||    
T  32593109 tcctcggcagttaactatcgaagttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccga 32593188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 2426609 - 2426559
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatc 62  Q
    |||||||||||||| |||||||||||||| ||| |||| ||||||||||||    
T  2426609 tgagatgaataatgaatgagagagcttctgccaaatttatagcagaagatc 2426559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 2743474 - 2743392
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||||||||||   || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  2743474 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 2743392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 142
Target Start/End: Complemental strand, 19440329 - 19440251
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 142  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||| | ||||  ||| ||||||||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgagg 19440251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 20366313 - 20366191
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttttt 115  Q
    |||||||||| |||||| |||||||   |||||||||| |||||||||||| || |||||||  || |||||  |   | |||||||||| | |||||||    
T  20366313 atgaataatgaatgagaaagcttctggtagatttgtagtagaagatcctcgacaattaactaccgaggttttttttagcagttaactgcagctggttttt 20366214  T
Q  116 caatttctcgacagttaactgcc 138  Q
     |||| |||| ||||||||||||    
T  20366213 gaattcctcggcagttaactgcc 20366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 34049207 - 34049107
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  |||||| |||||||||||||||||  || |||||||||| | |||||||||| |||    
T  34049207 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 34049108  T
Q  110 g 110  Q
    |    
T  34049107 g 34049107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 48888811 - 48888671
Alignment:
Q  66 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 165  Q
    ||||||||||||  ||  ||||||||| | |||||||||| |||| |||| |||| |||| |||| |||||||||||| |||   || |||||||||| |    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcagt-aactgccgagggggcatttacgtattttacttgt 48888713  T
Q  166 gtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
    || | || |||||||||||  ||| ||||  |||||||||||    
T  48888712 gtgcctcagtcttatgaaatatgtgaacagtaattttcaaaa 48888671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 54389922 - 54389822
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  |||||| |||||||||||||||||  || |||||||||| | |||||||||| |||    
T  54389922 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 54389823  T
Q  110 g 110  Q
    |    
T  54389822 g 54389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 600541 - 600632
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||||||||||||  || |||||||||||| |||||||||  |||| ||| |||    ||| |||||||||| |||||| ||||||||    
T  600541 tcctcggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagggcgcaaaaac 600632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 19341591 - 19341682
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||||||||||||||   || ||||||||||   |||||||||| |||| |||  |||| |||| |||||||||||||||||  |||||||    
T  19341591 tcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaac 19341682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 24700797 - 24700718
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||||||  || | ||||||||   |||||||||| |||| |||  |||| |||||||||||||||||||    
T  24700797 tcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 48246488 - 48246398
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 151  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||| |||  ||    ||  ||||||||||||||||| |||||||    
T  48246488 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgagggggcaaaaa 48246398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 11380513 - 11380416
Alignment:
Q  65 cggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||| |||||  || ||| |||||| | |||||||||| ||   |||| |||| |||| |||||||||||||| || |||||||| |||||||||    
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttact 11380416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 46989617 - 46989532
Alignment:
Q  67 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||||||  || |||||||||| | |||||||||| ||||  ||  |||||||||  |||||||||||||| | ||||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaac 46989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 48250868 - 48250957
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||||||||||||   || |||||||||| | |||||||||| ||||  ||  |||| |||  ||||||||||||||||| ||||||||    
T  48250868 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaac 48250957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 52567837 - 52567700
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||   | ||||| |||| | ||||| |||| ||| ||||| ||||  ||| |||||||||||||||   |||||| | |||||||||    
T  52567837 ctcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttact 52567738  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
      ||| | || | |||||| ||||| ||||||||||||    
T  52567737 cgtgtgcctcagccttatgcaacgtatcaacaacaatt 52567700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 9582620 - 9582548
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactg 136  Q
    |||||||||||||   || ||||| |||| | ||||||||||  |||||||| ||||||||| ||||||||||    
T  9582620 tcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 13743347 - 13743287
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  13743347 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 13743287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 5e-42; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 12783905 - 12784056
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||| |||||    
T  12783905 tgagatgaataatggatgagagagctttttccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccggt 12784004  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    | || ||||  ||| |||||||||||||| || |||||| | ||||||||||    
T  12784005 tattgaattcatcggcagttaactgccgatggggcaaaagcgtattttactt 12784056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 13401611 - 13401465
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||| |||||||||   || |||||||   | |||||||||| ||| |    
T  13401611 tgagatgaataatggatgagagagcttctgtcatatttgtagcagaagatcctcggtagttaactaccaatattttccttagcagttaactgcagccgat 13401512  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattt 158  Q
    |||| |||| |||| ||||||||||||||||| |||||| |||||||    
T  13401511 tttttaattcctcggcagttaactgccgagggggcaaaagcatattt 13401465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 29061395 - 29061331
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29061395 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggaagttaact 29061331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 29065853 - 29065791
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  29065853 tgagatgaataatggatgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29065791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 29074866 - 29074804
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  29074866 tgagatgaataatggatgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29074804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 29079630 - 29079568
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  29079630 tgagatgaataatggatgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29079568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 29107439 - 29107377
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  29107439 tgagatgaataatggatgagagagcttccgccagatttgtagcagaagatcctcgacagttaa 29107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 13479767 - 13479660
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| | ||||||| |||| | |||||||||||| ||||||| |||||| | |||||||||| ||| | || | ||||||||| ||||||||||    
T  13479767 gttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaa 13479668  T
Q  196 caattttc 203  Q
    ||||||||    
T  13479667 caattttc 13479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 18001290 - 18001146
Alignment:
Q  60 atcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 159  Q
    |||||||| |||||| | | || |||||| ||| | |||||||||| ||||||||| |||| ||| |||||||||||||||  | |||   |||||||||    
T  18001290 atcctcggtagttaagtgtcgaggttttcttcggcagttaactgcagccggttttt-aattcctcaacagttaactgccgatagggcatttacatatttt 18001192  T
Q  160 acttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
    |||| ||||| ||   ||||||||| ||||||||||||||||||||    
T  18001191 acttgtgtacctcaaccttatgaaatgtgtcaacaacaattttcaa 18001146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 23958964 - 23958867
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||  || |||||||||| |  ||||||||| ||||||||  ||||||||| |||||||||||||||||  ||||||| |||||||    
T  23958964 ctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtatttta 23958867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 16192843 - 16192747
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 159  Q
    ||||||||||||||   || | ||||||||||  ||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||| ||||||    
T  16192843 ctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgtatttt 16192747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 32034340 - 32034404
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  32034340 tgagacgaataatggataagagatcttctgccagatttgtagcagaagatcatcggcagttaact 32034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 23986013 - 23986080
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||| ||||||||| ||||||||| |||||||||||| |||| |||||||| ||||||||||    
T  23986013 gttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttactt 23986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 31768829 - 31768739
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 151  Q
    |||||||||||||||||  || |||||||||| |  ||||||||| |||| |||| |||| |||| ||||||||||||||||| |||||||    
T  31768829 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaa 31768739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 13404632 - 13404768
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||   | ||||||| || | |||||||||| | |||| || |||| |||||||||||||| ||||||| |||||  | ||||||||||    
T  13404632 tcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttactt 13404731  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
     ||| | |||| |||||| || |||| ||||||||||    
T  13404732 gtgtgcctcggccttatgcaatgtgttaacaacaatt 13404768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 31146449 - 31146373
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    |||||||||||||||||  ||||||||||||||| |||||||||| |||| |||  |||| |||| |||||||||||    
T  31146449 tcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 13388705 - 13388787
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||  |||  ||||||||| ||||||||| |||||||    
T  13388705 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccgaggg 13388787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 30258263 - 30258356
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagattt--gtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||||||||||||  |||||||  ||||| ||||||  |||||||||||||   ||  ||||||||||| ||||||||||    
T  30258263 agatgaataatggatgagagagcttctctcagattttcgtagctgaagattatcggcagttaactgccgagattttcctcgacagttaactgca 30258356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 2051104 - 2050974
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttc-tcgacagttaactgccgagggagcaaaaacatatttt 159  Q
    ||||| |||| ||||||  || |||||||||| | |||||||||| |||||||  ||| ||| ||| |||||||||||||| ||||||||||| ||||||    
T  2051104 tcctctgcagataactaccgaggttttcctcggcagttaactgcaaccggttt--caaattcatcggcagttaactgccgaaggagcaaaaacgtatttt 2051007  T
Q  160 acttatgtacatcggtcttatgaaacgtgtcaa 192  Q
    |||  ||| |||| | |||||| || |||||||    
T  2051006 actcgtgtgcatcagccttatgcaatgtgtcaa 2050974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 6204954 - 6204854
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| |||    
T  6204954 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 6204855  T
Q  110 g 110  Q
    |    
T  6204854 g 6204854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 11691921 - 11691821
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| |||    
T  11691921 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 11691822  T
Q  110 g 110  Q
    |    
T  11691821 g 11691821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 32643523 - 32643660
Alignment:
Q  66 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 165  Q
    ||||||||||||  || |||||||||||| |||||||||| |||| |||| |||| || | ||||||||||||||||  |||   || |||||||||| |    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgt 32643622  T
Q  166 gtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |  | ||   ||||||||| |||| |||||||||||||    
T  32643623 gggcttcaaccttatgaaatgtgtgaacaacaattttc 32643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 7537239 - 7537183
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||||| ||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  7537239 gttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaac 7537183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 22305192 - 22305104
Alignment:
Q  53 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 140  Q
    |||| ||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  22305192 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 22305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 17596764 - 17596833
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagattt---gtagcagaagatcctcggcagttaactat 78  Q
    ||||||||||||||||||||| ||||||| ||||||||   | ||||||||||||||| || ||||||||    
T  17596764 tgagatgaataatggatgagatagcttctgccagatttatagcagcagaagatcctcgacaattaactat 17596833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 29286284 - 29286166
Alignment:
Q  82 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 181  Q
    ||||||||||| | |||||||||| ||||||| | | || |||| ||||||||| ||||||| |||||||| ||  |||||| ||| | ||   ||||||    
T  29286284 tgttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatg 29286185  T
Q  182 aaacgtgtcaacaacaatt 200  Q
     || |||||||||||||||    
T  29286184 caatgtgtcaacaacaatt 29286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 26856013 - 26855976
Alignment:
Q  19 aataatggatgagagagcttctaccagatttgtagcag 56  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26856013 aataatggatgagagagcttctgccagatttgtagcag 26855976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 8193206 - 8193282
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    |||||||||||||||| | || |||||||||| | |||||||||| |||  |||| |||| |||| |||||||||||    
T  8193206 tcctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgc 8193282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 28362728 - 28362804
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    ||||| |||||||||||| || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||    
T  28362728 tcctctgcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 32026096 - 32026037
Alignment:
Q  146 caaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
    ||||||| |||||||||| ||| | || | ||||||||| ||||||||||||||||||||    
T  32026096 caaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttcaa 32026037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 2405512 - 2405438
Alignment:
Q  131 taactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 205  Q
    ||||||||||||||| |||||| |||||||||  |||  ||| | ||||| |||||||| |||||||||| ||||    
T  2405512 taactgccgagggagaaaaaacgtattttactcgtgtttatcagccttatcaaacgtgtgaacaacaattctcaa 2405438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 6320532 - 6320585
Alignment:
Q  107 ccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||| |||| |||| |||||||||||||||||||||   |||||||||||||||    
T  6320532 ccggatttttaattcctcgacagttaactgccgaggagacaaaaacatatttta 6320585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 11157812 - 11157771
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaact 102  Q
    |||||||||||||||||| || |||||||||||| |||||||    
T  11157812 tcctcggcagttaactatcgaagttttcctcgacagttaact 11157771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 11840247 - 11840291
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||  || |||||||||||| ||||||||||    
T  11840247 tcctcggcagttaactaccgaggttttcctcgacagttaactgca 11840291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 958542 - 958732
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  || |||||||||| | |||||||||| |||||    
T  958542 tgagaagaataatggatgagagagcttctgccggatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggt 958641  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |||| ||||  ||| |||||||||| |||| |  ||||||| |||||||||||||| | || | ||||| ||| ||||||||| ||||||||    
T  958642 ttttgaattcatcg-cagttaactgtcgagaggacaaaaacgtattttacttatgtgcctcagccttataaaatgtgtcaacatcaattttc 958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 44561278 - 44561469
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||  ||  |||||||||   |||||||||| |||||    
T  44561278 tgagatgaataatggatgagagagcttctgccagatttgtagcagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccggt 44561377  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |||| | || |||| ||||||||  ||||| | |||||| | |||||||||  |||   || | ||||||||| ||||||||||||||||||    
T  44561378 tttttatttactcggcagttaacaaccgagagggcaaaatcgtattttactcgtgtttctcagccttatgaaatgtgtcaacaacaattttc 44561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 56138377 - 56138222
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||||||| ||||     
T  56138377 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcggcagttaactgcagccgga 56138278  T
Q  112 tt-----ttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||     || ||||||||| |||||||||| ||| || |||||| | |||||||||    
T  56138277 tttttaatttaatttctcggcagttaactgtcgaaggggcaaaatcgtattttact 56138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 203
Target Start/End: Original strand, 29700268 - 29700441
Alignment:
Q  30 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 129  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||  || |||||||||| | |||||||||| |||||| || |||| |||  |||    
T  29700268 agagagcttctgccagatttgtagcagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcag 29700367  T
Q  130 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    ||||||| |||||   ||||| | |||||||||| ||| | || | ||||||||| ||||||||||||||||||    
T  29700368 ttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 29700441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 34530743 - 34530807
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34530743 tgagatgaataatggatgagagagcttctgccaaatttgtagcagaagatcctcggcagttaact 34530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 39588191 - 39588127
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39588191 tgagatgaataatggatgagagagcttctgccatatttgtagcagaagatcctcggcagttaact 39588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 51429277 - 51429341
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  51429277 tgagatgaataatggatgagagagcttcttccagatttgtagcagaagatcctcgacagttaact 51429341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 37959720 - 37959858
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  ||||||||||||| | |||||||||| | |||| || |||| ||| |||||||||||||||||| | |||||| |||||||||     
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactc 37959819  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
     ||| | || | |||||| || |||||||||||||||||    
T  37959820 gtgtgcctcagccttatgtaatgtgtcaacaacaatttt 37959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 34154376 - 34154440
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  34154376 tgagatgaataatagatgagagagcttctgccagatttgtagcagaagatcctctgcagttaact 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 56304975 - 56304911
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  56304975 tgagatgaataatggatgagagagcttctgccagatttgtagcagaaaatcctcggcaattaact 56304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 4768719 - 4768612
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| || | |||| |||| |||| ||||||||||||||||| ||||||  ||||||||||| ||| |||| | ||||||||| ||||||||||    
T  4768719 gttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgtcaacaa 4768620  T
Q  196 caattttc 203  Q
    ||||||||    
T  4768619 caattttc 4768612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 51426610 - 51426471
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||||||| ||| ||||| |||| |  ||||||||| ||| ||||| |||| ||||||||||||||| |||  |  ||||||| ||||||||||    
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttactt 51426511  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
     ||| | |  | ||||||||||||||||||||||||||||    
T  51426510 gtgtgcctaagccttatgaaacgtgtcaacaacaattttc 51426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 6283417 - 6283479
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  6283417 agatgaataatggatgagagagcttcggccagatttgaagcagaagatcctcggcagttaact 6283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 1042056 - 1041932
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttttt 115  Q
    ||||| |||| |||||||||||| | |||||||||||| |||||||||||||||||||||||  ||  |||| |||| | ||||||||||  ||| |||     
T  1042056 atgaacaatgaatgagagagcttatgccagatttgtagtagaagatcctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttc 1041957  T
Q  116 caatttctcgacagttaactgccga 140  Q
     |||| |||| ||||||||||||||    
T  1041956 taattcctcggcagttaactgccga 1041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 21472504 - 21472624
Alignment:
Q  84 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaa 183  Q
    ||||||||| | |||||||||| ||| ||||| |||| |||| ||||||||||||||||  |||||||| |||||||||  |||   || | ||||||||    
T  21472504 ttttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaa 21472603  T
Q  184 acgtgtcaacaacaattttca 204  Q
    | |||||||||||||||||||    
T  21472604 atgtgtcaacaacaattttca 21472624  T

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Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 42885576 - 42885510
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccaga--tttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||||    
T  42885576 tgagatgaataatggatgagagagcttctgccagatttttgtagcagaagatcatcggcagttaact 42885510  T

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Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 38464770 - 38464907
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    ||||||||||  || |||||||| ||| |||||||||| |||||||   |||| |||| || ||||||| ||||| ||||||| ||||||||||| ||||    
T  38464770 cagttaactaccgaggttttccttgacagttaactgcagccggtttcg-aattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgt 38464868  T
Q  168 acatcggtcttatgaaacgtgtcaacaacaattttcaaa 206  Q
    || ||   ||||||||| ||||||||||||||| |||||    
T  38464869 acctcaaccttatgaaatgtgtcaacaacaattctcaaa 38464907  T

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Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 4786296 - 4786345
Alignment:
Q  26 gatgagagagcttctaccagatttgtagcagaagatcctcggcagttaac 75  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4786296 gatgagagagcttctaccagatttgtagcagaagatcatcggcagttaac 4786345  T

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Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 28081582 - 28081490
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||||||| || |||||||  ||  ||||||||| | ||||||||||    
T  28081582 agatgaataatggatgagaggagattctgccagatttgtagcagaagatcctcgacacttaactaacgagattttcctcggcagttaactgca 28081490  T

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Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 55794047 - 55793916
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||||||||||||||||||| || |||| |||||||| ||||  |||||||||||||||||||||||   || |||||||||| | |||||||||| |||    
T  55794047 agatgaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagccg 55793948  T
Q  110 g-tttttcaatttctcgacagttaactgccga 140  Q
    | ||||||||  | ||| ||||||||||||||    
T  55793947 gatttttcaaaatttcggcagttaactgccga 55793916  T

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Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 4979914 - 4980060
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  |||  |||||||  | |||||||||| ||||||||| || |  ||||||||||||||||||||||| |||||| ||  |||    
T  4979914 tcctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaatta 4980013  T
Q  161 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
    ||  ||| | ||   |||||| || ||||||||||||||| ||||||    
T  4980014 ctcgtgtgcctcaaccttatgcaatgtgtcaacaacaattctcaaaa 4980060  T

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Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 9890071 - 9889969
Alignment:
Q  60 atcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 159  Q
    ||||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | ||||||    
T  9890071 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttt 9889972  T
Q  160 act 162  Q
    |||    
T  9889971 act 9889969  T

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Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 11494616 - 11494519
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||||  |||| |||||||||||| |||||||||  ||||||| |||||||||    
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttttg-aattcctcgacagttaattgccgaggggacaaaaacgtattttact 11494519  T

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Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 49572919 - 49573045
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | |||||||||| ||| || || |||| ||||||||||||||| ||| || |||||||| |||||||||| ||| | || | ||||||     
T  49572919 gttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgtgcctcagccttatgc 49573018  T
Q  183 aacgtgtcaacaacaattttcaaaaat 209  Q
    || ||||||||||| ||| || |||||    
T  49573019 aatgtgtcaacaacgattctctaaaat 49573045  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 243296 - 243357
Alignment:
Q  15 gatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||  ||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  243296 gatgaataatgagtgagagagcttctgccagatttgtaacagaagatcctcgacagttaact 243357  T

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Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 15999796 - 15999878
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || |||||||||| | ||||| |||| |||| |||  ||||||||| |||||||||||||||||    
T  15999796 tcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgaggg 15999878  T

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Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6178056 - 6178156
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| |||    
T  6178056 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 6178155  T
Q  110 g 110  Q
    |    
T  6178156 g 6178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 49094211 - 49094111
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| |||    
T  49094211 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 49094112  T
Q  110 g 110  Q
    |    
T  49094111 g 49094111  T

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Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 41795307 - 41795402
Alignment:
Q  19 aataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 110  Q
    ||||||||||||||| || |||| |||||||| ||||  ||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  41795307 aataatggatgagaggagattctgccagattttgtagtgcagaagatcctcggcagttaactaacgaggttttcctcggcagttaactgcagccgg 41795402  T

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Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 955865 - 955726
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || ||||| |||| | |||||||||| ||| ||||| |||| |||  |||||||||||| | |  |||||||| ||||||||||    
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttactt 955766  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
     ||| | ||    |||||||| ||||||||| ||||||||    
T  955765 gtgtgcctcaactttatgaaatgtgtcaacatcaattttc 955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 21017951 - 21018081
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagatttgtagc--agaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 110  Q
    ||||||||||| |||||||| || |||| |||||||||||||  |||||||| |||||||||||||   || |||||||||| | ||||| |||| ||||    
T  21017951 agatgaataatagatgagaggagattctgccagatttgtagctcagaagatcatcggcagttaactgccgaggttttcctcggcagttaattgcagccgg 21018050  T
Q  111 -tttttcaatttctcgacagttaactgccga 140  Q
     ||||||||  | ||  ||||||||||||||    
T  21018051 atttttcaaaatttcagcagttaactgccga 21018081  T

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Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 34154434 - 34154541
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||||||||| |||| |||| |||||||||||||| ||  ||||||  ||||||||   |||   || | ||||||||| ||||||||||    
T  34154434 gttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaacaa 34154533  T
Q  196 caattttc 203  Q
    ||||||||    
T  34154534 caattttc 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 1044539 - 1044617
Alignment:
Q  84 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||| | |||||||||| || | |||  ||||  |||||||||||||||||| ||||||||| |||||||||||    
T  1044539 ttttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaaggagcaaaatcatattttact 1044617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 15995798 - 15995716
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| || ||||||||||||||    
T  15995798 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgaggg 15995716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 18884501 - 18884583
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||||||||||   || ||||| |||| | |||||||||| ||||||||||||  | ||| |||||||||||||||||    
T  18884501 tcctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccgaggg 18884583  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 19069263 - 19069181
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| || ||||||||||||||    
T  19069263 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgaggg 19069181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 17139665 - 17139618
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 144  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  17139665 gttaactgcagccggtttttta-tttctcgacagttaactgccgaggga 17139618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 21470977 - 21470877
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||  | ||||||||||  | |||||| |||  ||||||||||||||||||||    ||||||| |||||||||    
T  21470977 ctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttact 21470878  T
Q  163 t 163  Q
    |    
T  21470877 t 21470877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 16984158 - 16984249
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||||||||||||| || |||||||||| | |||||||||| |||| |||  ||    ||| ||||||||||||||||| | ||||||    
T  16984158 tcctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaac 16984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 24417448 - 24417487
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaact 135  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  24417448 gttaactgcagccggtttttgaatttctcgacagttaact 24417487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 44051089 - 44051228
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || | ||||||||   |||||||||| ||||||| | | || |||| |||||||| ||||| || |||||||| ||  |||    
T  44051089 tcctcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaatta 44051188  T
Q  161 cttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    ||  ||| | || | |||||| || |||||||||||||||    
T  44051189 ctggtgtgcctcagccttatgcaatgtgtcaacaacaatt 44051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 48806561 - 48806482
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    ||||||||||||||||  |||  ||||||||| | |||||||||| |||||| || ||  | ||||||||||||||||||    
T  48806561 tcctcggcagttaactgctgaaattttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccga 48806482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 50274812 - 50274745
Alignment:
Q  85 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| ||||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaac 50274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 18578705 - 18578623
Alignment:
Q  81 atgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||| |||| | | |||||||| ||| ||||| |||| ||||||||||||||||| |||  |||||||  ||||||||||    
T  18578705 atgtttttctcggcagataactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttactt 18578623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 37394289 - 37394223
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||||||||||| |||  |||| ||||||||||||||||||| |  |||||| | |||||||||    
T  37394289 gttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttact 37394223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 37865232 - 37865203
Alignment:
Q  47 tttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||||    
T  37865232 tttgtagcagaagatcctcggcagttaact 37865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 48256567 - 48256624
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatt 120  Q
    ||||||||||||||| ||| |||||||||| | |||||||||| |||| |||| ||||    
T  48256567 ctcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaatt 48256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 6280926 - 6280842
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||||||||  ||||||||||||     ||||||||| ||||||||| ||||  | ||||||||||||||||| | ||||||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaac 6280842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 11287593 - 11287557
Alignment:
Q  19 aataatggatgagagagcttctaccagatttgtagca 55  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  11287593 aataatggatgagagagcttctgccacatttgtagca 11287557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 41023461 - 41023385
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgcc 138  Q
    ||||||||||||||||  || | |||||||  | |||||||||| |||| |||  ||||||||| ||||||||||||    
T  41023461 cctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgcc 41023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 30355189 - 30355375
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | |||||||||| ||| |||    
T  30355189 agatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgattt 30355288  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    || ||||  ||  || |||||||||||||| |||||| | |||||||||  |||   || ||| ||||||| |||||||||||||||    
T  30355289 ttgaattcttcagcaattaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgtcaacaacaatt 30355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 46863292 - 46863480
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||  ||  ||||| |   | |||||||||| |||||    
T  46863292 tgagatgaataatggatgaaagagcttctgccagatttgtagcagaagatcttcggcagttaactacagagattttcgttcgcagttaactgcagccggt 46863391  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |||||||||||||| |||||||||||||| || |||||||| |||||||||| |||   || | |||||| || | |||||||||||||    
T  46863392 ttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaacaacaatt 46863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 41047902 - 41047715
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  || |||||||||| | ||||||| || ||| |    
T  41047902 tgagatgaataatggatgagagagcttcctccagatttgtagcagaagatcctcggcagttaactaccgaagttttcctcggcagttaactacacccgat 41047803  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    | || ||||  ||  ||||||||| |||| | ||||||||  ||||||| |||||| |  | |||||||| || |||||||||||||||    
T  41047802 tattaaattcttctgcagttaactaccga-gaagcaaaaatgtattttatttatgtgccgcagtcttatgcaatgtgtcaacaacaatt 41047715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 28980123 - 28980309
Alignment:
Q  15 gatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcc-tcgactgttaactgcatccggttt 113  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||  || ||||||| ||| | ||||||||||||||| |     
T  28980123 gatgaataatggatgagagagcttctgtcagatttgtagcagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggata 28980222  T
Q  114 ttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    || ||||  ||| ||| ||||||| ||||| |||||||| |||||||||  |||   || | |||||| || |||||||||||||||    
T  28980223 ttgaattcttcggcagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaatt 28980309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 42682119 - 42681931
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||| ||  || |||||||||| | |||||||||| | |||    
T  42682119 tgagatgaataatggatgagagaacttatgctagatttgtagcagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgcagctggt 42682020  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |||| |||||||| || ||||||| ||||||   ||||||   ||||||||||||| | || | ||||| |||  |||||| |||||||    
T  42682019 ttttgaatttctcaaccgttaactaccgaggagacaaaaatgcattttacttatgtgcctcagccttataaaatatgtcaagaacaatt 42681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 40587786 - 40587693
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  40587786 tgagatgaataatggatgagagagcttctttcagatttatagcataagatcctcggcagttaactactgaggttttcctcgacagttaactgca 40587693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 21188374 - 21188438
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21188374 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 21188438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 9494804 - 9494945
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||| |||||||||   || |||||||||| | |||||||||| ||||||||| |||| |||| ||||||||||||||||| ||| | || ||||||||    
T  9494804 cctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttac 9494903  T
Q  162 ttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    || ||| | || | ||||||||| ||||||||||||||||||    
T  9494904 ttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 9494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 17838776 - 17838695
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcg 92  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  17838776 tgagatgaataatggatgagaggagattctgccagatttgtagcagaagatcgtcggcagttaactatcgaggttttcctcg 17838695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 36394886 - 36394966
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcg 92  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||  || ||||||||||    
T  36394886 tgagattaataacggatgagagagcttctgccagatttgtagcagaagatcctcggtagttaactaccgaggttttcctcg 36394966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 36392195 - 36392056
Alignment:
Q  67 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 166  Q
    |||||||||| |||| |||||||||| | |||||| ||| ||| ||||| |||| ||| ||||||||||| |||||| |||||||| |||||||||| ||    
T  36392195 gcagttaacttttgaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtg 36392096  T
Q  167 tacatcggtcttatgaaacgtgtcaacaacaattttcaaa 206  Q
    | | |  | |||||| || ||||||||||||||| |||||    
T  36392095 tgcctaagccttatgtaatgtgtcaacaacaattctcaaa 36392056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 37340377 - 37340231
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||||||||||||||  || ||||| |||| | |||||||||| ||||||||| |||| ||||||||||||||| ||| |   ||||||| |||||||     
T  37340377 cctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttat 37340278  T
Q  162 ttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    |||||| | |  |||||||| || ||||||||| ||||| |||||||    
T  37340277 ttatgtgccttagtcttatgtaatgtgtcaacatcaattctcaaaaa 37340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 34139996 - 34139932
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  34139996 tgagatgaataatggataagagagcttctgccagatttgtagaggaagatcctcggcagttaact 34139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 45361690 - 45361619
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    |||||||||| |||| |||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  45361690 gttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgt 45361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 45364168 - 45364227
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagt 71  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  45364168 tgagatgaataatagataagagagcttctaccagatttgtagccgaagatcctcggcagt 45364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 47061000 - 47060864
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || |||||||||| | ||||||| || ||| ||||  |||| |||||||||||||||||||||| |||||||| |||||||||    
T  47061000 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttg-aattcctcgacagttaactgccgagggggcaaaaacgtattttact 47060902  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    | | | | || | |||||||||  ||||||||| ||||    
T  47060901 tgtatgcctcagccttatgaaatatgtcaacaataatt 47060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 10225902 - 10225985
Alignment:
Q  123 tcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg-aaacgtgtcaacaacaattttcaa 205  Q
    |||||||||||||| |||||  ||||||||||||||||||||||| | || | |||||| ||| ||||||||||||||||||||    
T  10225902 tcgacagttaactgtcgaggaggcaaaaacatattttacttatgtgcttcagccttatgaaaatgtgtcaacaacaattttcaa 10225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 46860552 - 46860485
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  46860552 gttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttactt 46860485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 28115480 - 28115545
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||| ||||  ||||||||||    
T  28115480 tgagatgaataatggatgagagagcttatgctagatttgtagcagaagaccctcaacagttaacta 28115545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 43686859 - 43686920
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||| |  |||||||||||||||| || |||||||||||||||    
T  43686859 atgaataatggatgagagagcttatgtcagatttgtagcagaaaattctcggcagttaacta 43686920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 47776408 - 47776307
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||| ||  || |||||||||| | |||||||||| || | |||| ||||||||| |||||||||| |||||| |||||| | |||||||    
T  47776408 tcctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtatttta 47776309  T
Q  161 ct 162  Q
    ||    
T  47776308 ct 47776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 48269766 - 48269710
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggc 68  Q
    ||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||    
T  48269766 tgagatgaataatggatgagagaacttttgtcagatttgtagcagaagatcctcggc 48269710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 48314714 - 48314611
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| |||||| || |||| |||| ||||||||||||||||| |||||||  |||||||||| ||||| ||   |||||| || ||||||||||    
T  48314714 gttaactgcagccggttattgaattcctcggcagttaactgccgaggg-gcaaaaatgtattttacttgtgtacctcaaccttatgcaatgtgtcaacaa 48314616  T
Q  196 caatt 200  Q
    |||||    
T  48314615 caatt 48314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 19044369 - 19044223
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||||| |  |||||||||  ||||||   |||| |||| || |||||||||||| || ||||||| |||||||    
T  19044369 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtatttta 19044271  T
Q  161 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    || |||| | || | |||||| || |||||||||| |||| |||||||    
T  19044270 ctcatgtgcctcagccttatgcaatgtgtcaacaataattctcaaaaa 19044223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 20710267 - 20710413
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||||| |  |||||||||  ||||||   |||| |||| || |||||||||||| || ||||||| |||||||    
T  20710267 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtatttta 20710365  T
Q  161 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    || |||| | || | |||||| || |||||||||| |||| |||||||    
T  20710366 ctcatgtgcctcagccttatgcaatgtgtcaacaataattctcaaaaa 20710413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 10705302 - 10705180
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    ||||| |||| | |||||||||| ||| ||||| ||||||||| |||||||||||| |||| | |||||  |||||||||| ||| | |  | |||||||    
T  10705302 gtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttacttgtgtgccttagccttatga 10705203  T
Q  183 aacgtgtcaacaacaattttcaa 205  Q
    ||  |||||| ||||||||||||    
T  10705202 aatatgtcaataacaattttcaa 10705180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 27453615 - 27453697
Alignment:
Q  85 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    |||||||| | |||||||||| |||| |||| |||| |||| ||||||||||||||||| |||||  | ||||||||||||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgt 27453697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 200
Target Start/End: Original strand, 41049208 - 41049324
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| | |||||||||| ||| || || ||||  ||||||||||||| |||| | | ||||| | |||||||||||||| |||| | ||||||     
T  41049208 gttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaagaa-caaaagcgtattttacttatgtgcatcagccttatgc 41049306  T
Q  183 aacgtgtcaacaacaatt 200  Q
    || |||||||||||||||    
T  41049307 aatgtgtcaacaacaatt 41049324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 9367670 - 9367770
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||| ||||||||||||||| || |||| |||||||| ||||  |||||| |||||||||||||||||  || |||||||||| | |||||||||| |||    
T  9367670 agatcaataatggatgagaggagattctgccagattttgtagtgcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg 9367769  T
Q  110 g 110  Q
    |    
T  9367770 g 9367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 42684218 - 42684262
Alignment:
Q  119 tttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  42684218 tttctcgacagttaactgccgatggaacaaaaacgtattttactt 42684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 34622551 - 34622436
Alignment:
Q  85 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaa 184  Q
    |||||||||| ||||||||||  |||||| | |||| |||  |||||||||| | |||| |||||||| ||  |||||| ||| | || | |||||| ||    
T  34622551 tttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgcctcagccttatgcaa 34622452  T
Q  185 cgtgtcaacaacaatt 200  Q
     |||||||||||||||    
T  34622451 tgtgtcaacaacaatt 34622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 36186491 - 36186611
Alignment:
Q  82 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt-acatcggtcttat 180  Q
    ||||||||||| | |||||||||| |||||||   |||| |||| || |||||||||||||| |||||| | |||||||||  ||| ||| | | |||||    
T  36186491 tgttttcctcggcagttaactgcaaccggtttcg-aattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgaca-cagccttat 36186588  T
Q  181 gaaacgtgtcaacaacaattttc 203  Q
    | || ||||||||||||||||||    
T  36186589 gcaatgtgtcaacaacaattttc 36186611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 40590546 - 40590587
Alignment:
Q  119 tttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  40590546 tttctcggcagttaactgccgagggggcaaaaacgtatttta 40590587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 48269690 - 48269618
Alignment:
Q  127 cagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    ||||||||||||||| | | ||||||||||||||||| ||| | || | ||||| ||| |||||||||||||||    
T  48269690 cagttaactgccgagaggg-aaaaacatattttacttgtgtgcctcagccttataaaatgtgtcaacaacaatt 48269618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 10708333 - 10708401
Alignment:
Q  127 cagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||||||| || ||||||| ||||||||||  |||   || ||||||||||| ||||||||||    
T  10708333 cagttaactgccgaaggggcaaaaatatattttactcgtgtttctcagtcttatgaaatgtgtcaacaa 10708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 20353927 - 20353971
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||    
T  20353927 tcctcggcagttaactactgaggttttcctcgatagttaactgca 20353971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 48316259 - 48316295
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttg 50  Q
    |||| |||||||||||||||||||||| |||||||||    
T  48316259 agattaataatggatgagagagcttctgccagatttg 48316295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 7e-38; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 13972187 - 13972001
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| | ||  || |||||||||| |||||||||||| || ||    
T  13972187 tgagatgaataatagatgagagagcttctgccagatttgtagcagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcagccagt 13972088  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |||| |||| |||| ||| |||||||||| || |||||||| |||||||||| |||   || | ||||||||| |||||||||||||||    
T  13972087 tttt-aattcctcggcag-taactgccgaaggggcaaaaacgtattttacttgtgtttctcagccttatgaaatgtgtcaacaacaatt 13972001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 29261488 - 29261349
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||| |||||||||| ||| |||||| ||| | ||||| |||| ||| |||| ||||||||| |||||||||||||||||  |||||||| |||||||||    
T  29261488 ctcgacagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattttact 29261389  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    | ||| |||| | ||||||||||||||||||||||||||||    
T  29261388 tctgtgcatc-gccttatgaaacgtgtcaacaacaattttc 29261349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 42572705 - 42572836
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |    ||||||| |||||||||| |||||    
T  42572705 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctcgacagttaactgcagccggt 42572804  T
Q  112 tt-ttcaatttctcgacagttaactgccgaggg 143  Q
    || |||||  | |||||||||||||| ||||||    
T  42572805 ttcttcaaaat-tcgacagttaactgtcgaggg 42572836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 29763167 - 29763232
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29763167 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaacta 29763232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 27487614 - 27487678
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27487614 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 27487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 6434873 - 6434795
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcct 90  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||    
T  6434873 tgagatgaataatggatgagagtgcttctaccagatttgtagcagaagatccttggcagttaactaccgaagttttcct 6434795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 49927451 - 49927649
Alignment:
Q  14 agatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcgg------------cagttaactattgatgttttcctcgactgttaac 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||            ||||||||||  || ||||| |||| | ||||||    
T  49927451 agatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcggtagttaactcgacagttaactaccgaggtttttctcggcagttaac 49927550  T
Q  102 tgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
    |  | ||||||||| ||||  ||| |||||||||||||||||  ||||||| |||||||||  |||   |||| | ||||||| |||||||||||||||    
T  49927551 tatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgtttctcggccatatgaaatgtgtcaacaacaatt 49927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 14174859 - 14174923
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14174859 tgagatgaataatggatgagagagcttctgccagatttttagcagaagatcctcggcagttaact 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 46141855 - 46141719
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  ||||||||||||| | |||||||||| |||||| || |||| |||| ||||||||||||||| | |||||| | ||||||||||    
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttactt 46141756  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
     ||||| || | |||||| ||  ||||||||||||||    
T  46141755 gtgtacctcagccttatgcaatatgtcaacaacaatt 46141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 46973277 - 46973138
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||| || |||||||||| | |||||||||| ||||||||| |||| |||| |||||||||||| |||| |||||| | |||||||||    
T  46973277 ctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttact 46973179  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    | |||   || | || |||||| ||||||||||||||||||    
T  46973178 tgtgtgtctcagcctaatgaaatgtgtcaacaacaattttc 46973138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 13147621 - 13147528
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 105  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||| | || ||||||||||   ||||||||||    
T  13147621 tgagatgaataatggatgagagagtttttaccagatttgtagcagaagatcatcgacagttaactgtcgaggttttcctcggtagttaactgca 13147528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 13173889 - 13173765
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    |||||||||| |||||||||||| ||||||||| |||| |  | ||||||||||||||||| ||||||   |||||||||| ||| | || | |||||||    
T  13173889 gttttcctcggctgttaactgcagccggtttttgaattcccag-cagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatga 13173791  T
Q  183 aacgtgtcaacaacaattttcaaaaa 208  Q
    || |||||||||||||||||||||||    
T  13173790 aatgtgtcaacaacaattttcaaaaa 13173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 13178131 - 13178230
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||| | || |||||||||  | |||||||||| | ||||||| ||||||||  |||||||||||||||||||||||||| |||||||||    
T  13178131 ctcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttact 13178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26637204 - 26637259
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcgg 67  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26637204 tgagatgaataatggatgagagagcttctgccagatttgtagcagaagatcctcgg 26637259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 41804037 - 41804172
Alignment:
Q  68 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 167  Q
    ||||||||||  || |||||||||| | ||||||||||  |||||||| |||| |||| |||||||||||||| || |||||| | |||||||||| |||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgt 41804136  T
Q  168 acatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
     | || | ||||| ||| ||||||||||||||||||    
T  41804137 gcctcagccttataaaatgtgtcaacaacaattttc 41804172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 29709259 - 29709408
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||| |||||| | | ||||||||||||||  |||| |||  | ||||||||||  | ||    
T  29709259 tgagatgaataatggatgaaagagcttctgctagatttatagcaaaagatctttgacagttaactattgagatttttctcatcagttaactgca-acagt 29709357  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||| ||||| || |||||||||||||||  |||||||||  |||||||||    
T  29709358 ttttgaatttttcaacagttaactgccgaatgagcaaaaatgtattttact 29709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 18975120 - 18975256
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || |||||||||  | |||||||||| || ||| || |||| ||||||||||||| |||||||| |||||||| ||||||||||    
T  18975120 tcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttactt 18975219  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatt 200  Q
     ||||| || |  ||||  || |||||||||||||||    
T  18975220 gtgtacctcagctttatacaatgtgtcaacaacaatt 18975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 19054100 - 19053993
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||||||||| |||| |||| |||||||||| |||||| |||||||| |||||||||  |||   || | ||||||||| ||||||||||    
T  19054100 gttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaacaa 19054001  T
Q  196 caattttc 203  Q
    ||||||||    
T  19054000 caattttc 19053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 49395714 - 49395663
Alignment:
Q  26 gatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49395714 gatgagagagcttctgccagatttgtagcagaagatcctcggcagttaacta 49395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 49426813 - 49426750
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaa 74  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  49426813 tgagatgaataatggatgagaggagattctgccagatttgtagcagaagatcctcggcagttaa 49426750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 19159750 - 19159619
Alignment:
Q  14 agatgaataatggatgagag-agcttctaccagattt-gtagc--agaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 109  Q
    |||||||||||||||||||| || |||| |||||||| |||||  |||||||||||||||||||||||  || |||||||| | | |||||||||| |||    
T  19159750 agatgaataatggatgagaggagattctgccagattttgtagcgcagaagatcctcggcagttaactaccgaggttttccttggcagttaactgcagccg 19159651  T
Q  110 g-tttttcaatttctcgacagttaactgccga 140  Q
    | ||||||||  | ||| ||||||||||||||    
T  19159650 gatttttcaaaatttcggcagttaactgccga 19159619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 44596960 - 44596896
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||| ||| ||||||||||    
T  44596960 tgagatgaataatggatgagagagtttctgccaaatttgtagcagaagatactcagcagttaact 44596896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 23276111 - 23276206
Alignment:
Q  67 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||| || |||||||||| | |||||||| | |||| |||| |||| |||  ||||||||||||||||| |||||||| |||||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttact 23276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 35521654 - 35521548
Alignment:
Q  97 ttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaac 196  Q
    ||||||||| ||||||||| | || |||| ||||||||||||||| | |||||| | |||||||||| ||| | || | ||||| ||| |||||||||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  197 aattttc 203  Q
    |||||||    
T  35521554 aattttc 35521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 11183261 - 11183161
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 161  Q
    ||||| ||||||||||  || |||||||||| | |||||||||| |||| |||| |||| |||  |||||||||| | ||||||||||||| ||||||||    
T  11183261 cctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttac 11183162  T
Q  162 t 162  Q
    |    
T  11183161 t 11183161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 21944379 - 21944519
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||| |||||||||| || |||||||||| |   |||||||| ||||||||| |||||||||||||||| ||  ||||||   |||||| ||||||| |    
T  21944379 ctcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtattttatt 21944478  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |||||    | | ||||||| | ||||||||||||||||||    
T  21944479 tatgtgtcccagccttatgatatgtgtcaacaacaattttc 21944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 26633600 - 26633465
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||||| ||||  |||  ||||||   ||||||| |||||| | ||||||||||    
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtattttactt 26633504  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
     ||| | ||   ||||||||| |||||||||||||||||    
T  26633503 gtgtgcctcaaccttatgaaatgtgtcaacaacaatttt 26633465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 29435097 - 29434950
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggt 111  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||| || |||||| |||||||||||  || ||| || |||   ||||||||||  ||||    
T  29435097 tgagatgaataatggatgagagaacttctgccaaatttgtagca-aaaatcctctgcagttaactaccgaggttgtcatcggaagttaactgcagtcggt 29434999  T
Q  112 ttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    | || ||||  |||| ||||||||||| || | | |||||| |||||||    
T  29434998 tattgaattcttcgaaagttaactgccaagagggtaaaaacgtatttta 29434950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 51269063 - 51269003
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagtt 72  Q
    |||||||||||||| |||||||||||||| | | |||||||||||||||||||||| ||||    
T  51269063 tgagatgaataatgaatgagagagcttctgctaaatttgtagcagaagatcctcggtagtt 51269003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 36908619 - 36908512
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||  |||||||  |||||||||| ||| | ||   ||||| ||| |||||||||     
T  36908619 gttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgtgtcaacat 36908520  T
Q  196 caattttc 203  Q
    ||||||||    
T  36908519 caattttc 36908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 49924929 - 49924786
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||||||   |||| |||||||| | |||||||| | ||||||||| ||||| ||| ||||||| |||||| || |||||||| ||  |||||     
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 207  Q
     ||| | || | |||||| || ||||||||||||||| ||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaattctcaaaa 49924786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 25040095 - 25040205
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 182  Q
    ||||||||||||  ||||||| | ||||||||  |||||||||||||||||||||||| ||  |||||   |||||||||| ||| | ||||  ||||||    
T  25040095 gttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgtgcctcggctttatga 25040194  T
Q  183 aacgtgtcaac 193  Q
    || ||||||||    
T  25040195 aatgtgtcaac 25040205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 35258870 - 35258948
Alignment:
Q  62 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 140  Q
    |||||||||||||| || || ||||||||||  ||||||||||| |||| |||| |||| |||| ||||||||||||||    
T  35258870 cctcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccga 35258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 6562158 - 6562259
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || | |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | |||||||    
T  6562158 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T
Q  161 ct 162  Q
    ||    
T  6562258 ct 6562259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 19499115 - 19499249
Alignment:
Q  67 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 166  Q
    ||||||||| | ||| |||||||||| | |||||||||| |||  |||| ||||||||  |||||||||| ||||||  ||||||| |||||||||| ||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgaggg--caaaaacgtattttacttgtg 19499212  T
Q  167 tacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    |   || ||||||||| | |||  |||||||||||||    
T  19499213 tgtctcagtcttatgatatgtgcgaacaacaattttc 19499249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 4208502 - 4208454
Alignment:
Q  16 atgaataatggatgagagagcttctaccagatttgtagcagaagatcct 64  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||    
T  4208502 atgaataatggatgagagagcttctggtagatttgtagcagaagatcct 4208454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 13636111 - 13636199
Alignment:
Q  53 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 140  Q
    |||| ||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  13636111 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 13636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 36072442 - 36072303
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||| ||||||||||||||| ||| ||| | ||| | || ||||| | ||||||| ||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcggcagctaattaccg-gagaacaaaatcgtattttattt 36072344  T
Q  164 atgtacatcggtcttatgaaacgtgtcaacaacaattttca 204  Q
     ||| | |    ||||||||| |||||||||||||||||||    
T  36072343 gtgtgccttaaccttatgaaatgtgtcaacaacaattttca 36072303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 36076557 - 36076699
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||| ||||  || |||||||||| | |||||||||| ||||||||| |||| ||||   ||||||| |||| || | |||| | |||||||||    
T  36076557 ctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaa-cgtattttact 36076655  T
Q  163 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 206  Q
    | |||   || | ||||||||| ||||||||| |||||||||||    
T  36076656 tgtgtttctcagccttatgaaatgtgtcaacagcaattttcaaa 36076699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 52802203 - 52802116
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 151  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||| | |||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaa 52802116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 27485100 - 27485034
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||| |||| |||| |||| || | ||||||||||||||||| |||||||| |||||||||    
T  27485100 gttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttact 27485034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 36908699 - 36908640
Alignment:
Q  12 tgagatgaataatggatga----gagagcttctaccagatttgtagcagaagatcctcgg 67  Q
    |||||||||||||||||||    |||||||||| |||||||||||||||||| |||||||    
T  36908699 tgagatgaataatggatgaatgagagagcttctgccagatttgtagcagaagctcctcgg 36908640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 42570159 - 42570077
Alignment:
Q  120 ttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 202  Q
    ||||||||||||||||| |||||  | |||| | | |||||||| ||| | || | |||||||||||||||||||||||||||    
T  42570159 ttctcgacagttaactgtcgaggatgtaaaatcgtgttttacttgtgtgcctcagccttatgaaacgtgtcaacaacaatttt 42570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 44470008 - 44470090
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    ||||||||||||||||   || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  44470008 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 44470090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 24364680 - 24364801
Alignment:
Q  19 aataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaa 118  Q
    ||||||||||| |||||||||| ||||||||||||||  ||  | ||||||||||||| | || |||||||||    |||||||||| ||| ||||  |     
T  24364680 aataatggatgtgagagcttctgccagatttgtagcaagagcgcatcggcagttaactgtcgaggttttcctcagtagttaactgcaaccgattttaaac 24364779  T
Q  119 tttctcgacagttaactgccga 140  Q
     | |||| ||||||||||||||    
T  24364780 ctcctcggcagttaactgccga 24364801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 48751407 - 48751508
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||||| |  ||||||||| |||| |||| |||| |||| ||||| | ||||||||| | |||| | |||||||    
T  48751407 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtatttta 48751506  T
Q  161 ct 162  Q
    ||    
T  48751507 ct 48751508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 15047358 - 15047274
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggag 145  Q
    |||||||||||||||||  || |  ||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||||    
T  15047358 tcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggag 15047274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 29438020 - 29438108
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 152  Q
    ||||||||||| ||  || ||||||||||   |||||||||| ||||||||| ||| | ||  ||||||||||||||||| ||||||||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaac 29438108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 30910022 - 30910082
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||| | |||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  30910022 gttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggg 30910082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 38690007 - 38689866
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||| | | |||||||||| |||| |||  |||| ||||||| |||||| ||||||| | |||| | |||||||    
T  38690007 tcctcggcagttaactaccgaggttttccttggcagttaactgcagccgg-tttcgaattcctcgacatttaactaccgagggggtaaaagcgtatttta 38689909  T
Q  161 cttatgt-acatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    || |||| ||| | |  ||||| || ||||||||||||||||||    
T  38689908 ctcatgtgaca-cagctttatgcaatgtgtcaacaacaattttc 38689866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 41779804 - 41779766
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttg 50  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  41779804 tgagatgaataatggatgagagagcttctgctagatttg 41779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 44336323 - 44336249
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    |||||||||||||||  || |||||||||| | |||||||||| |||  |||  |||| ||||||||||||||||    
T  44336323 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 51289960 - 51290058
Alignment:
Q  64 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    ||||||| ||||||  || |||||||||| | |||||||||| |||| |||| |||| |||   |||||||||||||||| | |||| | |||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgagggggtaaaatcttattttact 51290058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 3941147 - 3941228
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 142  Q
    |||||||||||||||||  || ||||||||||   |||||||||| || |||| | |||| |||| ||||||||||| ||||    
T  3941147 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgcagagg 3941228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 9711648 - 9711749
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||||||||||||   || |||||||||| | |||||||||  |||| |||  |||| |||| ||||||||||| || || |||||| | |||||||    
T  9711648 tcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtatttta 9711747  T
Q  161 ct 162  Q
    ||    
T  9711748 ct 9711749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 23359346 - 23359435
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 150  Q
    |||||||||||| ||||  || ||||||||||   |||||||||| |||| |||  |||| |||| || |||||||||||||| ||||||    
T  23359346 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaa 23359435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 6557989 - 6557909
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||||||||||  ||  ||||||||| | |||||||||| |||  |||  |||| |||| |||||||||||||||||    
T  6557989 ctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgaggg 6557909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 14172116 - 14172048
Alignment:
Q  135 tgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 203  Q
    ||||||||| |||||| | |||||||||| ||| | || | |||||| || ||||||||||||||||||    
T  14172116 tgccgagggggcaaaagcgtattttacttgtgtgcttcagccttatggaatgtgtcaacaacaattttc 14172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 45943723 - 45943799
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    |||||||||||||||||  || ||||||||||   ||||||| || ||||||| | |||| ||||||| ||||||||    
T  45943723 tcctcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaactgc 45943799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 51337539 - 51337587
Alignment:
Q  90 tcgactgttaactgcatccggtttttcaatttctcgacagttaactgcc 138  Q
    ||||| |||||||||| ||||||||| |||| |||| ||||||||||||    
T  51337539 tcgacagttaactgcagccggttttttaattcctcggcagttaactgcc 51337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 12335 - 12434
Alignment:
Q  12 tgagatgaataatggatgagag-agcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 110  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||  || |||||| ||| | |||||||||| ||||    
T  12335 tgagatgaataatggatgagagtagattctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgcagccgg 12434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 18847 - 18912
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaacta 77  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  18847 tgagatgaataatggatgagaaagcttctgccagatttgtagcagaagatcctcgacagttaacta 18912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 16439 - 16345
Alignment:
Q  109 ggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttca 204  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | | ||| | || ||||||||||| |||||||||| ||||||||    
T  16439 ggtttttcaatttctcgacagttaactaccgagggggcaaaaacatatttt-catgtgtgcctcagtcttatgaaatgtgtcaacaataattttca 16345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 921 - 857
Alignment:
Q  12 tgagatgaataatggatgagagagcttctaccagatttgtagcagaagatcctcggcagttaact 76  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  921 tgagatgaataatggataagagagcttctgccagatttgtagaggaagatcctcggcagttaact 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 431 - 578
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    ||||||| ||||||||   || |||||||||||| |||||||||| |||| || | ||||  ||| |||||||||||||||||||||||| | |||||||    
T  431 tcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtatttta 530  T
Q  161 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 208  Q
    ||  |||   || ||||||| ||| |||| |||| ||||| |||||||    
T  531 ctcgtgtttctcagtcttatcaaatgtgtaaacatcaattctcaaaaa 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 3939 - 3860
Alignment:
Q  83 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 163  Q
    |||||||||| | |||||||||| ||| ||||| |||| ||||||||||||||||||||||  |||||| |||||||||||    
T  3939 gttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaa-atattttactt 3860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 54641 - 54558
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 144  Q
    |||||||||||||||| | ||||||||||||| | |||||||||| |||||| |||||  | | ||||||||| ||||||||||    
T  54641 tcctcggcagttaactgtcgatgttttcctcggcagttaactgcagccggttcttcaaaattttgacagttaattgccgaggga 54558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 17348 - 17449
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || | |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | |||||||    
T  17348 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T
Q  161 ct 162  Q
    ||    
T  17448 ct 17449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 15952 - 16040
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaa 149  Q
    ||||||| |||||||||  || |||||||||| | |||||||||| | || |||  |||| |||| |||||||||||||||||||||||    
T  15952 tcctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaa 16040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 36486 - 36611
Alignment:
Q  20 ataatggatgagag-agcttctaccagattt-gtag--cagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttt 114  Q
    |||||||||||||| || |||| |||||||| ||||  ||| ||||||||||||||||||||  || |||||||||| | ||||| |||| |||| ||||    
T  36486 ataatggatgagaggagattctgccagattttgtagggcaggagatcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttt 36585  T
Q  115 tcaatttctcgacagttaactgccga 140  Q
    ||||  | ||| ||||||||||||||    
T  36586 tcaaaatttcggcagttaactgccga 36611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 11742 - 11849
Alignment:
Q  96 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 195  Q
    |||||||||| ||||||||| ||||  ||  |||||||||||||| || ||||||   |||||||||| ||||  ||  |||||| ||| |||||||||     
T  11742 gttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctcaatcttataaaatgtgtcaacag 11841  T
Q  196 caattttc 203  Q
    ||||||||    
T  11842 caattttc 11849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 15754 - 15704
Alignment:
Q  86 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactg 136  Q
    ||||||| | |||||||||| ||||||||| |||| |||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

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Target: scaffold0219; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 20109 - 20185
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 137  Q
    ||||||||||| |||||  || | |||||||||| |||||||| | ||| ||||| |||| |||| |||||||||||    
T  20109 tcctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgc 20185  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 232600 - 232542
Alignment:
Q  85 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 143  Q
    |||||||| | ||||||||||  ||| |||| |||| ||||||||||||||||||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggg 232542  T

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Target: scaffold0494 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 907 - 806
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || |||||||||| | ||||||| || |||  |||  |||| || | ||||||||||||||||| | |||| | |||||||    
T  907 tcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtatttta 808  T
Q  161 ct 162  Q
    ||    
T  807 ct 806  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 4397 - 4498
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 160  Q
    |||||||||||||||||  || | ||||||||    ||||||||| ||||  ||  |||| |||| ||||||||||||||||||| |||| | |||||||    
T  4397 tcctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtatttta 4496  T
Q  161 ct 162  Q
    ||    
T  4497 ct 4498  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 22479 - 22390
Alignment:
Q  61 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 150  Q
    |||||||||||||||||  ||  ||||||||  | |||||||||| |||  |||  |||| |||| ||||||||||||||||| ||||||    
T  22479 tcctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaa 22390  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 7303 - 7407
Alignment:
Q  63 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 162  Q
    |||||||||||||||  || ||||| |||| | ||| | |||| ||||||||| |||| |||  || ||||||| | |||  ||||||||||||||||||    
T  7303 ctcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttact 7402  T
Q  163 tatgt 167  Q
     ||||    
T  7403 catgt 7407  T

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