View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15732_high_5 (Length: 334)
Name: NF15732_high_5
Description: NF15732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15732_high_5 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 308; Significance: 1e-173; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 16661927 - 16662234
Alignment:
| Q |
11 |
aagaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16661927 |
aagaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaa |
16662026 |
T |
|
| Q |
111 |
gttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgg |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662027 |
gttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgg |
16662126 |
T |
|
| Q |
211 |
atatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgagattga |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16662127 |
atatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgagattga |
16662226 |
T |
|
| Q |
311 |
ttatttat |
318 |
Q |
| |
|
|||||||| |
|
|
| T |
16662227 |
ttatttat |
16662234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 16657453 - 16657724
Alignment:
| Q |
12 |
agaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaag |
111 |
Q |
| |
|
|||||| ||||||||||| || | ||||||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||| |||||||| ||||| | |
|
|
| T |
16657453 |
agaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgagg |
16657552 |
T |
|
| Q |
112 |
ttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgga |
211 |
Q |
| |
|
| ||||||||| | |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| | || ||| | | |||||| || ||||| |
|
|
| T |
16657553 |
taaaagccactgccggaaacactcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtgga |
16657652 |
T |
|
| Q |
212 |
tatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
|| | | |||| |||||||||||||||||||||||||| | ||||| | ||| || |||||||||||||| |
|
|
| T |
16657653 |
cataagtgggaactcaagagccttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttt |
16657724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 12234914 - 12234674
Alignment:
| Q |
19 |
attgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
118 |
Q |
| |
|
|||||| ||| ||| ||||||||||||| |||||||| || ||||| |||||||||||||||||||| ||||| |||||| ||||||| |||||||||| |
|
|
| T |
12234914 |
attgtgttggagaacgaaatatttttgtttttgatctcggcggtggcacttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagc |
12234815 |
T |
|
| Q |
119 |
cacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcact |
218 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||| || ||||| ||||| |||||||| || | | |
|
|
| T |
12234814 |
cacagccggaaacactcacctcgggggagaggactttgataacagaatggtaaactaccttgctcaagagttcaatagaaagaaaaaagtggacatgagt |
12234715 |
T |
|
| Q |
219 |
aggaatccaagagccttgaggaggttgagaacttcttgtga |
259 |
Q |
| |
|
| ||||||| ||||||||||||||| |||||| ||||||| |
|
|
| T |
12234714 |
ggaaatccaaaagccttgaggaggttaagaactgcttgtga |
12234674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 36 - 259
Target Start/End: Original strand, 12258541 - 12258764
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| | | |||||||| ||||||| || || |||||||||| | |
|
|
| T |
12258541 |
aatatttttgtctttgatcttggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgc |
12258640 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcctt |
235 |
Q |
| |
|
|||| || ||||||||||||||||| |||||| ||| |||||||| |||| || || || ||||||||||| ||||| | | | ||||||||||| || |
|
|
| T |
12258641 |
accttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaagagaaagaacaaagtagatataagtggaaatccaagagcttt |
12258740 |
T |
|
| Q |
236 |
gaggaggttgagaacttcttgtga |
259 |
Q |
| |
|
|||||| |||| ||| ||||||| |
|
|
| T |
12258741 |
gaggagattgaaaacagcttgtga |
12258764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 284
Target Start/End: Complemental strand, 7542436 - 7542186
Alignment:
| Q |
34 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacac |
133 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| ||||||||||||||| | || || ||||| || | ||| ||||||| |||||| |||| ||||| |
|
|
| T |
7542436 |
gaaatatttttgtttttgatcttggcggtggcacttttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacac |
7542337 |
T |
|
| Q |
134 |
tcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcc |
233 |
Q |
| |
|
|||||| || ||||| ||||||||||| |||||| |||||||||||| |||| || || || |||||||||||||| || | | ||||||||| |||| |
|
|
| T |
7542336 |
tcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagcc |
7542237 |
T |
|
| Q |
234 |
ttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttc |
284 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||| ||||| |||| |||||| |
|
|
| T |
7542236 |
ttgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttc |
7542186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 305
Target Start/End: Complemental strand, 14703616 - 14703347
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| || |||| || ||| |||||||||||| |
|
|
| T |
14703616 |
aatatatttgtctttgatcttggtggtggtacttttgacgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactc |
14703517 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcctt |
235 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||||||| |||| || || || || |||| | |||| || | | | ||||||| |||||| |
|
|
| T |
14703516 |
acctcgggggagaggacttcgataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtggaaatccaaaagcctt |
14703417 |
T |
|
| Q |
236 |
gaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgag |
305 |
Q |
| |
|
||||| |||||||| |||| || | ||| ||||| ||||| |||||| || | ||| || |||||||| |
|
|
| T |
14703416 |
aaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgag |
14703347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 43625644 - 43625442
Alignment:
| Q |
12 |
agaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaag |
111 |
Q |
| |
|
|||| |||||||| ||| ||| |||||||||| ||||||| ||||||||||| ||||||||||||||| | || |||||||| | | ||||| | |
|
|
| T |
43625644 |
agaattaattgtgttggagaacgaaatattttcatctttgaccttggtggtggtacttttgatgtgtctatacttacaattaaggacaaggtcttccgtg |
43625545 |
T |
|
| Q |
112 |
ttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgga |
211 |
Q |
| |
|
||||||||||| |||||||||||||||| || ||||||||||||||| | |||||| |||||||||||| |||||||| | | ||||||||| ||||| |
|
|
| T |
43625544 |
ttaaagccactgctggaaacactcaccttggaggagaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtgga |
43625445 |
T |
|
| Q |
212 |
tat |
214 |
Q |
| |
|
||| |
|
|
| T |
43625444 |
tat |
43625442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 12245349 - 12245589
Alignment:
| Q |
19 |
attgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
118 |
Q |
| |
|
|||||| ||| |||||||| |||||||| ||||||||||||||||| |||||||| || ||| |||| || ||||| | | | |||| ||||||| || |
|
|
| T |
12245349 |
attgtgttggagaaagaaacatttttgtgtttgatcttggtggtggcacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggc |
12245448 |
T |
|
| Q |
119 |
cacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcact |
218 |
Q |
| |
|
|||| |||||||||||||||| || |||||||| |||||||| |||||| | |||||||||| | || || || || ||||||||| ||||||| | | |
|
|
| T |
12245449 |
cactgctggaaacactcaccttggaggagaggattttgataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatattagt |
12245548 |
T |
|
| Q |
219 |
aggaatccaagagccttgaggaggttgagaacttcttgtga |
259 |
Q |
| |
|
| | ||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
12245549 |
gcaagttcaaaagccttgaggagattgagaactgcttgtga |
12245589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 11999619 - 11999478
Alignment:
| Q |
19 |
attgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
118 |
Q |
| |
|
|||||| ||| |||||||| ||||| |||||||||||||| ||||| ||||||||| ||||| | || |||||||| | ||||||| ||||||| || |
|
|
| T |
11999619 |
attgtgttggagaaagaaacattttagtctttgatcttggcggtggcacttttgatttgtctatactaacaattaaggacaatgtcttccaagttaaggc |
11999520 |
T |
|
| Q |
119 |
cacttctggaaacactcacctcgggggagaggactttgataa |
160 |
Q |
| |
|
||| |||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
11999519 |
cacagctggaaacactcacttcggaggagaggattttgataa |
11999478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 8585646 - 8585948
Alignment:
| Q |
16 |
gtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaa |
115 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8585646 |
gtaactgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaa |
8585745 |
T |
|
| Q |
116 |
agccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatc |
215 |
Q |
| |
|
||| || ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||| || |||||||| |||||||| |
|
|
| T |
8585746 |
agcaaccgctggaaatactcaccttgggggaggggactttgataacagaatgttgaactactttgttgaggaatttaagagaaagaacaatgtggatatt |
8585845 |
T |
|
| Q |
216 |
actaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaaattggtcaccgctattgagattgattatt |
315 |
Q |
| |
|
|||| ||| |||||||| |||||| |||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
8585846 |
actaagaacccaagagctttgaggcggttaagaacggcatgtgaaaaggcaaaaaggacactttctttcaaattggtcactactattgaaattgattatt |
8585945 |
T |
|
| Q |
316 |
tat |
318 |
Q |
| |
|
||| |
|
|
| T |
8585946 |
tat |
8585948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 8628755 - 8628608
Alignment:
| Q |
21 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
120 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8628755 |
tgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
8628656 |
T |
|
| Q |
121 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgt |
168 |
Q |
| |
|
|| ||||||| |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
8628655 |
ctgctggaaatactcaccttggtggagaggactttgataacagaatgt |
8628608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 10494310 - 10494581
Alignment:
| Q |
12 |
agaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaag |
111 |
Q |
| |
|
|||||| ||||||| ||| | |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
10494310 |
agaagtgattgtgagggtaaccgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaag |
10494409 |
T |
|
| Q |
112 |
ttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgga |
211 |
Q |
| |
|
| ||||||||| | || ||||||||||| |||||||||||||| |||||||||||| |||| || ||||| | || || || | |||||| || ||||| |
|
|
| T |
10494410 |
taaaagccactgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtgga |
10494509 |
T |
|
| Q |
212 |
tatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
|||| | ||||||||| | |||| ||||||||||||||| | ||||| | ||| ||||||| ||||||||| |
|
|
| T |
10494510 |
catcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttt |
10494581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 8659586 - 8659324
Alignment:
| Q |
21 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
120 |
Q |
| |
|
||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||||||||| ||||||| |
|
|
| T |
8659586 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
8659487 |
T |
|
| Q |
121 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactag |
220 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||||| | || || || | |||||| |||||||| || | | | |
|
|
| T |
8659486 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
8659387 |
T |
|
| Q |
221 |
gaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
|| |||| | |||| ||||||||||||||| | ||||| | ||| || |||||||||||||| |
|
|
| T |
8659386 |
taacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttt |
8659324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 34 - 283
Target Start/End: Complemental strand, 8667629 - 8667380
Alignment:
| Q |
34 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacac |
133 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| | |||||||| |
|
|
| T |
8667629 |
gaaatatttttgtctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacac |
8667530 |
T |
|
| Q |
134 |
tcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcc |
233 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||| ||||||| ||||| | || || || | |||||| |||||||| |||| | ||| |||| | || |
|
|
| T |
8667529 |
tcaccttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatcc |
8667430 |
T |
|
| Q |
234 |
ttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
|| ||||||||||||||| | ||||| | ||| ||||||| ||||||||| |
|
|
| T |
8667429 |
ttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttt |
8667380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 8654681 - 8654411
Alignment:
| Q |
13 |
gaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagt |
112 |
Q |
| |
|
||||||| | ||||||| || | |||||||| || ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||| || |
|
|
| T |
8654681 |
gaagtaactatgatggtaaacggaatattttggtatttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgt |
8654582 |
T |
|
| Q |
113 |
taaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggat |
212 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||||| |||||||||||||||||| || |||||||||| | || || || | |||||| |||||||| |
|
|
| T |
8654581 |
aaaagccactgctggaaacacgcacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaa |
8654482 |
T |
|
| Q |
213 |
atcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
|| | | || |||| | |||| ||||||||||||||| | ||||| | ||| ||||||| ||||||||| |
|
|
| T |
8654481 |
attagcggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttt |
8654411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 13333399 - 13333660
Alignment:
| Q |
19 |
attgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
118 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
13333399 |
attgtgatggtaagcgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagc |
13333498 |
T |
|
| Q |
119 |
cacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcact |
218 |
Q |
| |
|
||| | |||||||||||||| |||||||| ||||| |||||||||||| ||||||| ||||| | || || || | |||||| || || ||||||| | |
|
|
| T |
13333499 |
caccgcaggaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagt |
13333598 |
T |
|
| Q |
219 |
aggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctc |
280 |
Q |
| |
|
|||| |||| | |||| ||||||||||||||| | ||||| | || ||||||| |||||| |
|
|
| T |
13333599 |
gggaacccaaaatccttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctc |
13333660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 33 - 277
Target Start/End: Complemental strand, 8545844 - 8545600
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||| ||||||||||||||| | || ||||||||| | | |||||||| || || |||||| ||||| ||| |
|
|
| T |
8545844 |
agaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagaca |
8545745 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagc |
232 |
Q |
| |
|
|| |||| || || || |||||||||||||||||| |||| ||||||||||| || || || ||||||||||| | |||||| | | |||| ||| ||| |
|
|
| T |
8545744 |
cttacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagc |
8545645 |
T |
|
| Q |
233 |
cttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| ||||||||||| |
|
|
| T |
8545644 |
cttgaggaggttgagaactgcctgtgagaaggcaaaaaggacact |
8545600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 36 - 283
Target Start/End: Original strand, 27830835 - 27831082
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||| | |||||||| | | | ||||| ||||||| || ||| |||||||||||| |
|
|
| T |
27830835 |
aatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacactc |
27830934 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcctt |
235 |
Q |
| |
|
|||| || ||||||||||||||||| || ||| ||||||| |||||| | | || || | |||||| | |||||| || | | |||| ||||||||||| |
|
|
| T |
27830935 |
accttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcctt |
27831034 |
T |
|
| Q |
236 |
gaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
||||||| ||||||| | ||||| ||||| ||||||||||||||||| |
|
|
| T |
27831035 |
gaggaggctgagaacctaatgtgagaaggcaaaaaggacactctcttt |
27831082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 8647067 - 8646871
Alignment:
| Q |
54 |
cttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggact |
153 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||| | | | |||||| | ||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
8647067 |
cttggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggact |
8646968 |
T |
|
| Q |
154 |
ttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttgagaac |
250 |
Q |
| |
|
|||||| |||||| || || |||||| |||||||||| | ||||||||| ||||| || ||| | || |||||||||| |||||||||||||| |
|
|
| T |
8646967 |
ttgatagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagccttaaggaggttgagaac |
8646871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 6789726 - 6789473
Alignment:
| Q |
30 |
gaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaa |
129 |
Q |
| |
|
|||| ||||||||| ||||| || ||||||||||| ||||| ||||||||| || | ||||| |||| | | ||||| ||||||| ||||| ||||| |
|
|
| T |
6789726 |
gaaaaaaatattttcgtcttcgaccttggtggtggcactttcgatgtgtctatcttaacaatcaaagataaggtcttccaagttaaggccaccggtggaa |
6789627 |
T |
|
| Q |
130 |
acactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaag |
229 |
Q |
| |
|
||||||||||||| |||||||||||||||||| || || | |||||||||| | || ||||| |||||||||||||||||||| ||| | || |||| |
|
|
| T |
6789626 |
acactcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaag |
6789527 |
T |
|
| Q |
230 |
agccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
||||| || |||||||||||| | ||||||| ||| |||||| ||||||||| |
|
|
| T |
6789526 |
ggccttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctcttt |
6789473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 206
Target Start/End: Complemental strand, 8559544 - 8559371
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
||||||||||| |||||||||| |||||||| ||||||||||| ||||| ||||||||||| | || |||||||||| || |||||||| ||| ||| |
|
|
| T |
8559544 |
agaaatattttcatctttgatctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagaca |
8559445 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaa |
206 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||| |||| ||||||| ||||| ||| | |||||||||||| |
|
|
| T |
8559444 |
cacacctcggaggagaggactttgataacagaatggtgaaacactttgtaaaagagtttgagaggaagaacaaa |
8559371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 1301692 - 1301523
Alignment:
| Q |
12 |
agaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaag |
111 |
Q |
| |
|
|||||| | ||||||||| || | |||||||| |||||||| ||||| ||||| ||||||||||||||| |||| || || || || ||||||||||||| |
|
|
| T |
1301692 |
agaagtgactgtgatggtaaacggaatattttggtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaag |
1301593 |
T |
|
| Q |
112 |
ttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgt |
181 |
Q |
| |
|
| ||||||||| |||||| |||||||| || ||||||||||||||||| |||||| ||| ||||||||| |
|
|
| T |
1301592 |
taaaagccactggtggaaatactcaccttggaggagaggactttgataatagaatggtgagctactttgt |
1301523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 36 - 284
Target Start/End: Complemental strand, 17268147 - 17267899
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| | | | ||||| |||||||| ||||| |||| |||||| |
|
|
| T |
17268147 |
aatatttttgtctttgaccttggtggtgggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactc |
17268048 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcctt |
235 |
Q |
| |
|
| || ||||| |||||||||||||| |||||| | |||| ||||| | ||| | || ||||| || ||| || | || | |||| |||| |||| | |
|
|
| T |
17268047 |
atcttgggggtgaggactttgataatagaatggtatactattttgttgaggaaatcaaaaggaaaaaaaaattgaaaattgttgggaacccaaaagccat |
17267948 |
T |
|
| Q |
236 |
gaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttc |
284 |
Q |
| |
|
|||||||||||||||| | |||||||| || ||||||||||| |||||| |
|
|
| T |
17267947 |
gaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttctttc |
17267899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 283
Target Start/End: Complemental strand, 17260449 - 17260202
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||| | | | ||||| |||||||| ||||| |||| |||||| |
|
|
| T |
17260449 |
aatatttttgtctttgaccttggtggggggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactc |
17260350 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcctt |
235 |
Q |
| |
|
| || ||||| |||||||||||||| |||||| || |||| ||||| | || | || || | ||| ||| |||| || | | |||| |||| |||||| |
|
|
| T |
17260349 |
atcttgggggtgaggactttgataatagaatggtgtactattttgtagaggagatcaaaagaacgaaaaaattggacattattgggaacccaaaagcctt |
17260250 |
T |
|
| Q |
236 |
gaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
||||||||||||||| | |||||||| || ||||||||||| ||||| |
|
|
| T |
17260249 |
aaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttcttt |
17260202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 8616764 - 8616607
Alignment:
| Q |
161 |
cagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaa |
260 |
Q |
| |
|
||||||||||||||||||||| | || ||||| ||||||||||| |||||||| |||||||| |||||| | |||||| |||||| |||| | || ||| |
|
|
| T |
8616764 |
cagaatgttgaactactttgttgaggattttaagaggaagaacaatgtggatattactaggaacccaagatcgttgaggcggttgaaaactgcatgcgaa |
8616665 |
T |
|
| Q |
261 |
aaggcgaaaaggacactctctttcaaattggtcaccgctattgagattgattatttat |
318 |
Q |
| |
|
||||||||| ||| || || |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8616664 |
aaggcgaaacggatgctttcattcaaattggtcactactattgagattgattatttat |
8616607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 277
Target Start/End: Complemental strand, 8570522 - 8570278
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||| ||||||||||||||| | |||||| |||| | | | || |||||| || |||||| ||||| ||| |
|
|
| T |
8570522 |
agaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagaca |
8570423 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagc |
232 |
Q |
| |
|
||||||| || || || || ||||||||||||||||||| |||||||||| | || || | ||||||||| | |||||| | |||||| |||| ||| |
|
|
| T |
8570422 |
ctcacctgggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagc |
8570323 |
T |
|
| Q |
233 |
cttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
|||||||||||| ||||| ||||||| | ||| ||||||||||| |
|
|
| T |
8570322 |
cttgaggaggttaagaacagcttgtgagagggcaaaaaggacact |
8570278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 277
Target Start/End: Complemental strand, 8590836 - 8590605
Alignment:
| Q |
46 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
145 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||| |||||| || ||||||||||| ||| | || ||||| || || |
|
|
| T |
8590836 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
8590737 |
T |
|
| Q |
146 |
agaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttg |
245 |
Q |
| |
|
|||||||||||||||||||||| | || | || ||||| || |||| |||||||| ||||||||| | | | |||| |||| || | ||||||||| |
|
|
| T |
8590736 |
agaggactttgataacagaatggttcaccatttggtgaaggagtttaggaggaagaataaagtggatttaagtgggaacgcaagggctcttaggaggttg |
8590637 |
T |
|
| Q |
246 |
agaacttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
| ||| ||||||| | ||| ||||||||||| |
|
|
| T |
8590636 |
aaaacagcttgtgagagggctaaaaggacact |
8590605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 167
Target Start/End: Original strand, 8636300 - 8636434
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| || || || |||||| | |||| |||||||||||| ||||||||||||||||||||| | ||| ||| |
|
|
| T |
8636300 |
agaaacattttcgtatttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagaca |
8636399 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatg |
167 |
Q |
| |
|
| ||||| || |||||||||||||||||||||||| |
|
|
| T |
8636400 |
cacaccttggaggagaggactttgataacagaatg |
8636434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 8602185 - 8602037
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||| | || |||||||||| || |||||||| ||| ||| |
|
|
| T |
8602185 |
agaaatattttcatatttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagaca |
8602086 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgt |
181 |
Q |
| |
|
| ||||| || |||||||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
8602085 |
cacaccttggaggagaggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 3147472 - 3147328
Alignment:
| Q |
36 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactc |
135 |
Q |
| |
|
||||||||| ||||||| | |||||||||||||||||||||||||| || |||||||| | | | |||||| ||||||| |||| | |||||||| | |
|
|
| T |
3147472 |
aatatttttatctttgacttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacaccc |
3147373 |
T |
|
| Q |
136 |
acctcgggggagaggactttgataacagaatgttgaactactttg |
180 |
Q |
| |
|
|||| |||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
3147372 |
accttgggggagaggactttgataataggatggtgaactactttg |
3147328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 277
Target Start/End: Original strand, 7877706 - 7877934
Alignment:
| Q |
49 |
ttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggaga |
148 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||| |||||| | |||| |||| |||||| || | ||| ||| | ||| | |||||||| || ||||| |
|
|
| T |
7877706 |
ttgatcttggtggtggcactttcgatgtgtctcttctcacactaaaagatgatagctttgatgtaatagctactgccggagatactcacctaggtggaga |
7877805 |
T |
|
| Q |
149 |
ggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttgaga |
248 |
Q |
| |
|
||||||||||||||||||||||||| | || |||| || ||||| |||||||| |||||||| || | | || || || ||| | |||||||||||| |
|
|
| T |
7877806 |
ggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgagggcccttaggaggttgaga |
7877905 |
T |
|
| Q |
249 |
acttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
||| | ||||| | ||| ||||||||||| |
|
|
| T |
7877906 |
actgcatgtgagagggctaaaaggacact |
7877934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 8576553 - 8576293
Alignment:
| Q |
17 |
taattgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaa |
116 |
Q |
| |
|
|||||||| || | |||||||||||||| ||||||| ||||| ||||| ||||||||||||||| | |||||| |||| ||||||| ||||| || |
|
|
| T |
8576553 |
taattgtgttgataaaagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaag |
8576454 |
T |
|
| Q |
117 |
gccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatca |
216 |
Q |
| |
|
|||||| | ||| |||||||||| || || | ||||||||||||| |||| || | ||||||| || || || | | ||| |||||| |||||| | |
|
|
| T |
8576453 |
gccactgccggagacactcacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatatta |
8576354 |
T |
|
| Q |
217 |
ctaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
| |||| ||| |||||| ||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
8576353 |
gtgagaattcaaaagccttaaggaggttgagaactgcttgtgaaaaggcaaaaaggacact |
8576293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 29581811 - 29581970
Alignment:
| Q |
46 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
145 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||| | || | |||| |||||||| || |||||| |||| | |||||||| || || |
|
|
| T |
29581811 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggagg |
29581910 |
T |
|
| Q |
146 |
agaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaa |
205 |
Q |
| |
|
|||||||||||||||| ||||| |||| ||||||| ||| || || || ||||||||||| |
|
|
| T |
29581911 |
agaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaa |
29581970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 8382833 - 8382981
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| || || |||||| | ||| ||| |
|
|
| T |
8382833 |
agaaatattttcatctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagaca |
8382932 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgt |
181 |
Q |
| |
|
|||| || || || || ||||| ||||||||||| |||| |||||||| |
|
|
| T |
8382933 |
ctcatctaggaggtgaagacttagataacagaatcgtgaagtactttgt |
8382981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 29577642 - 29577807
Alignment:
| Q |
46 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
145 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||| |||||| |||| | |||| |||||||| || |||||| |||| | |||||||| || || |
|
|
| T |
29577642 |
tctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggagg |
29577741 |
T |
|
| Q |
146 |
agaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtgga |
211 |
Q |
| |
|
||||||||| ||||| | |||| ||| | |||||||||| || || || ||||||||||| ||||| |
|
|
| T |
29577742 |
agaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtgga |
29577807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 8610128 - 8609977
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||| ||| || || || || || ||| ||||| | | |
|
|
| T |
8610128 |
agaaatatttttatctttgatcttggtggtgggactttcgatgtgtctgttctcacaattaaaaacaatgctttcgatgtcaaggctactgctggagata |
8610029 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgtgaa |
184 |
Q |
| |
|
||||||| || ||||||||||||||| |||||||| | || |||||||||| |
|
|
| T |
8610028 |
ctcaccttggaggagaggactttgatcacagaatggttaatcactttgtgaa |
8609977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 8581911 - 8581762
Alignment:
| Q |
33 |
agaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaaca |
132 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||| ||||||||||||||| | |||||| |||| | | | || |||||| || |||||| ||||| ||| |
|
|
| T |
8581911 |
agaaatatttttatctttgaccttggaggtggaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagaca |
8581812 |
T |
|
| Q |
133 |
ctcacctcgggggagaggactttgataacagaatgttgaactactttgtg |
182 |
Q |
| |
|
||||||| || || || || ||||||||||||||| |||| |||||||| |
|
|
| T |
8581811 |
ctcacctgggaggggaagattttgataacagaatggtgaatcactttgtg |
8581762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 8538234 - 8538120
Alignment:
| Q |
46 |
tctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcggggg |
145 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||| ||| | || | ||| |||| ||| || |||||| | ||| | |||||||| || || |
|
|
| T |
8538234 |
tctttgatcttggtggtggaacttttgatgtatctctccttacattgaagaataatgcctttacagtcaaggccactgccggagatactcaccttggagg |
8538135 |
T |
|
| Q |
146 |
agaggactttgataa |
160 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8538134 |
agaggactttgataa |
8538120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 286
Target Start/End: Complemental strand, 30775475 - 30775210
Alignment:
| Q |
21 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
120 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||||||||| | |
|
|
| T |
30775475 |
tgtgatgctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaa |
30775376 |
T |
|
| Q |
121 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactag |
220 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| | ||||||||| ||||| || || | |
|
|
| T |
30775375 |
ctgctggaaacactcacatcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgg |
30775276 |
T |
|
| Q |
221 |
gaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttcaa |
286 |
Q |
| |
|
|||||||||||| ||||| |||||||||| | ||||||||||| |||||||||||||| ||||| |
|
|
| T |
30775275 |
gaatccaagagctttgagacagttgagaactgcatgtgaaaaggcaaaaaggacactctccttcaa |
30775210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 21 - 283
Target Start/End: Original strand, 9335836 - 9336098
Alignment:
| Q |
21 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
120 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||||| | |||||||| ||||||| |
|
|
| T |
9335836 |
tgtgatggtaaccgaaatatttttgtctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagcca |
9335935 |
T |
|
| Q |
121 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactag |
220 |
Q |
| |
|
| | |||||||| ||||| || || ||||||||||||||||||||| | ||||| |||||| |||| || || | |||||| |||||||| |||| |
|
|
| T |
9335936 |
ccgcaggaaacacgcaccttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagca |
9336035 |
T |
|
| Q |
221 |
gaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
||| |||| | |||| ||||||||||||||| | ||||| | ||| ||||||| ||| ||||| |
|
|
| T |
9336036 |
gaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttt |
9336098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 238
Target Start/End: Complemental strand, 35132657 - 35132454
Alignment:
| Q |
35 |
aaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacact |
134 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| || | || || ||||| | | ||||||| ||||||| |||||| | ||||||||| |
|
|
| T |
35132657 |
aaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaacact |
35132558 |
T |
|
| Q |
135 |
cacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcct |
234 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||| ||||||||||||| |||| || || || ||||||||||| || || | | ||||| ||| ||||| |
|
|
| T |
35132557 |
catctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgggaattcaaaagcct |
35132458 |
T |
|
| Q |
235 |
tgag |
238 |
Q |
| |
|
|||| |
|
|
| T |
35132457 |
tgag |
35132454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 15595257 - 15594995
Alignment:
| Q |
21 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
120 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| | | ||||| ||||||| |||| |
|
|
| T |
15595257 |
tgtgttggagaaagaaatatttttgtctttgatcttggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggcca |
15595158 |
T |
|
| Q |
121 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactag |
220 |
Q |
| |
|
| |||||||||||||| || |||||||||||||||||||||||| | |||||||||| | | ||||| || | |||||||||||||||||| ||| | |
|
|
| T |
15595157 |
caggcggaaacactcaccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgg |
15595058 |
T |
|
| Q |
221 |
gaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
283 |
Q |
| |
|
||| ||||| ||||||||||| ||||||||| | || |||| ||| |||||| ||||||||| |
|
|
| T |
15595057 |
gaacccaagggccttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttt |
15594995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 284
Target Start/End: Original strand, 4678516 - 4678766
Alignment:
| Q |
34 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacac |
133 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| | ||| || |||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
4678516 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
4678615 |
T |
|
| Q |
134 |
tcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagcc |
233 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| ||||||||||||| | || || || | |||||| || ||||| || | || ||| ||| | || |
|
|
| T |
4678616 |
tcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaaccc |
4678715 |
T |
|
| Q |
234 |
ttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctctttc |
284 |
Q |
| |
|
|| ||||||||||||||| | || || | ||| || ||||||||||||||| |
|
|
| T |
4678716 |
ttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttc |
4678766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 34 - 180
Target Start/End: Original strand, 34466751 - 34466897
Alignment:
| Q |
34 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacac |
133 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
34466751 |
gaaatattttcgtctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacac |
34466850 |
T |
|
| Q |
134 |
tcacctcgggggagaggactttgataacagaatgttgaactactttg |
180 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||| |||||| |
|
|
| T |
34466851 |
tcacctcggacgagaggactttgataatagaatggcgaaccactttg |
34466897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 277
Target Start/End: Complemental strand, 12528709 - 12528471
Alignment:
| Q |
39 |
atttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacc |
138 |
Q |
| |
|
|||||| | ||||| ||||| ||||| ||||||||||||||||| || ||| | || | ||||||| ||||| || |||||| | ||| ||||||||| |
|
|
| T |
12528709 |
atttttatttttgaccttggcggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcacc |
12528610 |
T |
|
| Q |
139 |
tcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgag |
238 |
Q |
| |
|
| || ||||||||||||||||| ||||| |||| ||||||||||||| ||||| |||||||||||||| || || | | |||| ||| |||| | || |
|
|
| T |
12528609 |
ttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaagaacaaagttgacattattgggaactcaaaagccctaag |
12528510 |
T |
|
| Q |
239 |
gaggttgagaacttcttgtgaaaaggcgaaaaggacact |
277 |
Q |
| |
|
||| ||||||||| || || ||||||||||||||||| |
|
|
| T |
12528509 |
gagattgagaactaactgcgagaaggcgaaaaggacact |
12528471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 250
Target Start/End: Complemental strand, 43744943 - 43744810
Alignment:
| Q |
117 |
gccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatca |
216 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||| |||||||| || ||| |||||||||| | | || ||||| | ||||||||| ||||| || | |
|
|
| T |
43744943 |
gccacctctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
43744844 |
T |
|
| Q |
217 |
ctaggaatccaagagccttgaggaggttgagaac |
250 |
Q |
| |
|
|| | || |||||||| || |||||||||||||| |
|
|
| T |
43744843 |
ctggaaacccaagagcattaaggaggttgagaac |
43744810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 43745061 - 43744999
Alignment:
| Q |
32 |
aagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaa |
94 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
43745061 |
aagaaatattttcatctttgacctgggtggtgggacttttgatgtgtctctccttacaattaa |
43744999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 28220038 - 28219912
Alignment:
| Q |
124 |
ctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaa |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||| |||||||||| | | || ||||| | ||||||||| ||||| || ||| | || |
|
|
| T |
28220038 |
ctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaa |
28219939 |
T |
|
| Q |
224 |
tccaagagccttgaggaggttgagaac |
250 |
Q |
| |
|
|||||||||| |||||||||||||| |
|
|
| T |
28219938 |
ctcaagagccttaaggaggttgagaac |
28219912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 28220161 - 28220110
Alignment:
| Q |
34 |
gaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcct |
85 |
Q |
| |
|
|||||||||| ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
28220161 |
gaaatattttcatctttgacctgggtggtgggacttttgatgtgtctctcct |
28220110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 28910765 - 28910650
Alignment:
| Q |
61 |
gtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggactttgataa |
160 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| | | | | ||||| ||||||| ||||| ||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
28910765 |
gtgggacttttgatgtttctctccttacaattcaggataaggtcttccaagttaaggccaccgctggaaacactcacctcggggtcgaggacattgataa |
28910666 |
T |
|
| Q |
161 |
cagaatgttgaactac |
176 |
Q |
| |
|
|| ||| |||||||| |
|
|
| T |
28910665 |
taggatggtgaactac |
28910650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 11133125 - 11133051
Alignment:
| Q |
113 |
taaagccacttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaaga |
187 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||| | ||||||||||||| |||| ||||| | || |||||||| |
|
|
| T |
11133125 |
taaagccactgctggagatactcacctcgggggacaagactttgataacacaatggtgaaccatttcgtgaaaga |
11133051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University