View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15732_high_9 (Length: 287)

Name: NF15732_high_9
Description: NF15732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15732_high_9
NF15732_high_9
[»] chr8 (48 HSPs)
chr8 (16-273)||(425906-426175)
chr8 (196-273)||(12045650-12045724)
chr8 (235-273)||(12959974-12960012)
chr8 (194-270)||(29509264-29509337)
chr8 (196-272)||(40719641-40719714)
chr8 (196-272)||(44380612-44380685)
chr8 (228-273)||(21418589-21418634)
chr8 (189-273)||(27630890-27630971)
chr8 (229-273)||(12659082-12659126)
chr8 (235-273)||(10653780-10653818)
chr8 (235-273)||(37392125-37392163)
chr8 (229-278)||(16808611-16808660)
chr8 (196-267)||(45101396-45101464)
chr8 (229-273)||(9550404-9550448)
chr8 (194-267)||(26026894-26026965)
chr8 (235-271)||(40464992-40465028)
chr8 (196-270)||(42443104-42443175)
chr8 (194-267)||(42543482-42543551)
chr8 (235-270)||(5642390-5642425)
chr8 (235-270)||(5644331-5644366)
chr8 (228-267)||(11879493-11879532)
chr8 (228-267)||(11896909-11896948)
chr8 (196-273)||(42047335-42047409)
chr8 (239-273)||(6004984-6005018)
chr8 (235-273)||(9431282-9431320)
chr8 (239-273)||(14548820-14548854)
chr8 (239-273)||(20852959-20852993)
chr8 (195-270)||(25830245-25830318)
chr8 (235-273)||(29910209-29910247)
chr8 (229-267)||(37210052-37210090)
chr8 (239-273)||(38174230-38174264)
chr8 (235-273)||(42716356-42716394)
chr8 (196-270)||(43715875-43715946)
chr8 (238-271)||(11789838-11789871)
chr8 (196-267)||(16699571-16699639)
chr8 (240-273)||(30578295-30578328)
chr8 (196-270)||(35067160-35067232)
chr8 (194-265)||(35937517-35937585)
chr8 (235-279)||(324085-324129)
chr8 (238-270)||(1796524-1796556)
chr8 (238-270)||(6440121-6440153)
chr8 (235-267)||(24116076-24116108)
chr8 (235-267)||(32174990-32175022)
chr8 (229-273)||(34970237-34970281)
chr8 (235-267)||(35818973-35819005)
chr8 (235-279)||(42658670-42658714)
chr8 (238-270)||(43285962-43285994)
chr8 (235-279)||(45081105-45081149)
[»] chr3 (55 HSPs)
chr3 (193-264)||(7949788-7949856)
chr3 (196-273)||(36869834-36869908)
chr3 (193-273)||(462398-462475)
chr3 (192-264)||(41877684-41877753)
chr3 (229-273)||(43900754-43900798)
chr3 (196-273)||(1901923-1901997)
chr3 (196-273)||(1911369-1911443)
chr3 (196-273)||(45150263-45150337)
chr3 (231-273)||(14207407-14207449)
chr3 (231-273)||(14215155-14215197)
chr3 (235-273)||(22153900-22153938)
chr3 (228-270)||(34733291-34733333)
chr3 (228-273)||(7211-7256)
chr3 (229-270)||(622460-622501)
chr3 (229-270)||(44334801-44334842)
chr3 (228-268)||(26279913-26279953)
chr3 (229-273)||(32008063-32008107)
chr3 (195-273)||(32457752-32457827)
chr3 (196-270)||(32981121-32981192)
chr3 (229-273)||(35425669-35425713)
chr3 (229-273)||(47988482-47988526)
chr3 (229-273)||(47997769-47997813)
chr3 (229-273)||(48007056-48007100)
chr3 (238-270)||(49021751-49021783)
chr3 (228-267)||(6126483-6126522)
chr3 (196-273)||(7867708-7867782)
chr3 (228-267)||(11173487-11173526)
chr3 (196-273)||(21579114-21579188)
chr3 (193-267)||(37303077-37303148)
chr3 (196-273)||(41877608-41877682)
chr3 (196-273)||(45528939-45529013)
chr3 (196-273)||(51032621-51032695)
chr3 (235-270)||(51672899-51672934)
chr3 (239-273)||(8868912-8868946)
chr3 (229-267)||(28269836-28269874)
chr3 (240-270)||(48176850-48176880)
chr3 (229-267)||(48649610-48649648)
chr3 (196-267)||(108431-108499)
chr3 (240-273)||(1834547-1834580)
chr3 (240-273)||(3484800-3484833)
chr3 (190-267)||(16969569-16969643)
chr3 (240-273)||(29846888-29846921)
chr3 (230-267)||(37303414-37303451)
chr3 (240-273)||(37852602-37852635)
chr3 (240-273)||(40785696-40785729)
chr3 (240-273)||(43149340-43149373)
chr3 (196-267)||(46473128-46473196)
chr3 (235-267)||(5340137-5340169)
chr3 (238-270)||(29917023-29917055)
chr3 (238-270)||(29966176-29966208)
chr3 (235-267)||(35554118-35554150)
chr3 (235-267)||(36442252-36442284)
chr3 (229-273)||(40159835-40159879)
chr3 (228-268)||(42104494-42104534)
chr3 (238-270)||(45293028-45293060)
[»] chr5 (48 HSPs)
chr5 (195-273)||(15639384-15639459)
chr5 (235-273)||(2456062-2456100)
chr5 (235-273)||(33910085-33910123)
chr5 (195-267)||(34381011-34381080)
chr5 (229-267)||(42909749-42909787)
chr5 (228-273)||(91244-91289)
chr5 (229-270)||(6046343-6046384)
chr5 (192-283)||(28903987-28904075)
chr5 (192-283)||(28940382-28940470)
chr5 (192-267)||(40223788-40223860)
chr5 (229-273)||(2117621-2117665)
chr5 (235-279)||(20591465-20591509)
chr5 (229-273)||(21023328-21023372)
chr5 (193-270)||(22098252-22098327)
chr5 (196-270)||(26660411-26660482)
chr5 (196-270)||(26932003-26932074)
chr5 (229-273)||(31329123-31329167)
chr5 (195-273)||(31708369-31708444)
chr5 (196-270)||(36713178-36713249)
chr5 (235-279)||(39191825-39191869)
chr5 (229-273)||(39840706-39840750)
chr5 (238-273)||(13734357-13734392)
chr5 (196-273)||(19271859-19271933)
chr5 (235-270)||(33626638-33626673)
chr5 (229-267)||(471844-471882)
chr5 (235-273)||(6964363-6964401)
chr5 (235-273)||(27340905-27340943)
chr5 (235-273)||(31025002-31025040)
chr5 (235-273)||(33743330-33743368)
chr5 (240-273)||(8725419-8725452)
chr5 (228-273)||(19376129-19376174)
chr5 (240-273)||(20040829-20040862)
chr5 (230-279)||(25255283-25255332)
chr5 (230-279)||(25319073-25319122)
chr5 (229-270)||(32873149-32873190)
chr5 (238-267)||(41321294-41321323)
chr5 (242-270)||(5698328-5698356)
chr5 (241-273)||(9636155-9636187)
chr5 (231-267)||(10232531-10232567)
chr5 (229-273)||(11880984-11881028)
chr5 (235-267)||(12661950-12661982)
chr5 (235-267)||(14206425-14206457)
chr5 (229-273)||(18638822-18638866)
chr5 (229-273)||(22647558-22647602)
chr5 (238-270)||(27546103-27546135)
chr5 (238-270)||(35172332-35172364)
chr5 (235-267)||(39458693-39458725)
chr5 (238-270)||(40364608-40364640)
[»] chr1 (56 HSPs)
chr1 (196-270)||(30530574-30530645)
chr1 (235-279)||(5975573-5975617)
chr1 (196-270)||(49189208-49189279)
chr1 (196-273)||(27352630-27352704)
chr1 (196-273)||(39815346-39815420)
chr1 (191-273)||(366652-366731)
chr1 (193-273)||(25098785-25098862)
chr1 (235-273)||(30196750-30196788)
chr1 (235-273)||(49596271-49596309)
chr1 (192-283)||(16658434-16658522)
chr1 (229-270)||(33422219-33422260)
chr1 (229-270)||(52417561-52417602)
chr1 (235-279)||(4154617-4154661)
chr1 (229-273)||(8464510-8464554)
chr1 (229-273)||(21441666-21441710)
chr1 (229-273)||(24611874-24611918)
chr1 (229-273)||(27810244-27810288)
chr1 (229-273)||(30530396-30530440)
chr1 (235-267)||(36954694-36954726)
chr1 (183-273)||(50226876-50226963)
chr1 (229-268)||(8905758-8905797)
chr1 (194-267)||(9445106-9445176)
chr1 (235-270)||(15059676-15059711)
chr1 (196-273)||(18541048-18541122)
chr1 (196-273)||(25988981-25989055)
chr1 (238-273)||(40596051-40596086)
chr1 (235-270)||(44112490-44112525)
chr1 (235-270)||(44641903-44641938)
chr1 (228-279)||(44950412-44950463)
chr1 (229-267)||(1615066-1615104)
chr1 (235-273)||(1724229-1724267)
chr1 (235-273)||(12489578-12489616)
chr1 (239-273)||(29254063-29254097)
chr1 (235-273)||(33669806-33669844)
chr1 (239-273)||(34941917-34941951)
chr1 (239-273)||(36930751-36930785)
chr1 (229-267)||(39010844-39010882)
chr1 (229-267)||(50141938-50141976)
chr1 (235-273)||(51250272-51250310)
chr1 (198-270)||(51339700-51339769)
chr1 (194-273)||(3606091-3606167)
chr1 (228-273)||(21255782-21255827)
chr1 (228-273)||(37843429-37843474)
chr1 (240-273)||(50460709-50460742)
chr1 (235-267)||(15470059-15470091)
chr1 (229-273)||(21728231-21728275)
chr1 (229-273)||(24775005-24775049)
chr1 (238-270)||(30536031-30536063)
chr1 (235-267)||(33100844-33100876)
chr1 (235-267)||(36690575-36690607)
chr1 (235-267)||(36706676-36706708)
chr1 (238-270)||(40139154-40139186)
chr1 (229-273)||(44672027-44672071)
chr1 (235-267)||(45272163-45272195)
chr1 (229-273)||(50017420-50017464)
chr1 (238-270)||(52437534-52437566)
[»] chr2 (42 HSPs)
chr2 (196-273)||(2308319-2308393)
chr2 (192-273)||(30856803-30856881)
chr2 (229-273)||(42665809-42665853)
chr2 (196-270)||(7497991-7498062)
chr2 (196-273)||(31635807-31635881)
chr2 (235-278)||(38600850-38600893)
chr2 (195-279)||(28165128-28165209)
chr2 (228-273)||(4842517-4842562)
chr2 (228-273)||(5455450-5455495)
chr2 (229-273)||(14797647-14797691)
chr2 (229-273)||(18619394-18619438)
chr2 (229-273)||(23358576-23358620)
chr2 (229-269)||(24361521-24361561)
chr2 (235-279)||(40496386-40496430)
chr2 (229-273)||(41868366-41868410)
chr2 (238-270)||(42532738-42532770)
chr2 (229-273)||(42554806-42554850)
chr2 (196-273)||(11980651-11980725)
chr2 (196-273)||(15283247-15283321)
chr2 (235-273)||(1889183-1889221)
chr2 (235-273)||(4263861-4263899)
chr2 (235-273)||(5191691-5191729)
chr2 (229-267)||(7086127-7086165)
chr2 (239-273)||(8555288-8555322)
chr2 (235-273)||(11442708-11442746)
chr2 (235-273)||(23045126-23045164)
chr2 (235-273)||(32688541-32688579)
chr2 (235-273)||(33857253-33857291)
chr2 (235-273)||(35965611-35965649)
chr2 (235-273)||(36795766-36795804)
chr2 (229-270)||(546385-546426)
chr2 (192-221)||(15678169-15678198)
chr2 (238-267)||(22353178-22353207)
chr2 (229-270)||(34262018-34262059)
chr2 (196-267)||(36587471-36587539)
chr2 (228-273)||(40951222-40951267)
chr2 (229-273)||(4723596-4723640)
chr2 (229-273)||(6639469-6639513)
chr2 (238-270)||(9194469-9194501)
chr2 (238-270)||(29449251-29449283)
chr2 (235-267)||(30996764-30996796)
chr2 (238-270)||(36625128-36625160)
[»] scaffold0154 (1 HSPs)
scaffold0154 (196-273)||(4315-4389)
[»] chr7 (44 HSPs)
chr7 (235-273)||(38547287-38547325)
chr7 (196-267)||(19426580-19426648)
chr7 (196-273)||(4971290-4971364)
chr7 (238-273)||(27688676-27688711)
chr7 (196-268)||(5378627-5378696)
chr7 (235-273)||(10619696-10619734)
chr7 (196-264)||(20406541-20406606)
chr7 (235-273)||(36186873-36186911)
chr7 (199-273)||(1789994-1790065)
chr7 (229-273)||(5724068-5724112)
chr7 (229-273)||(9055297-9055341)
chr7 (229-273)||(21037231-21037275)
chr7 (194-273)||(26153644-26153719)
chr7 (228-267)||(40842434-40842473)
chr7 (235-270)||(47644741-47644776)
chr7 (235-273)||(2790213-2790251)
chr7 (235-273)||(17500733-17500771)
chr7 (235-273)||(17552443-17552481)
chr7 (197-269)||(34349028-34349097)
chr7 (235-273)||(41254812-41254850)
chr7 (239-273)||(43079629-43079663)
chr7 (196-279)||(45154531-45154610)
chr7 (228-273)||(4678092-4678137)
chr7 (240-273)||(7295492-7295525)
chr7 (240-273)||(18925994-18926027)
chr7 (228-269)||(24267648-24267689)
chr7 (240-273)||(24380718-24380751)
chr7 (228-273)||(26123396-26123441)
chr7 (238-267)||(41189546-41189575)
chr7 (240-273)||(44187732-44187765)
chr7 (229-273)||(2756926-2756970)
chr7 (238-270)||(6269406-6269438)
chr7 (235-267)||(21153086-21153118)
chr7 (234-270)||(27070669-27070705)
chr7 (234-270)||(27207608-27207644)
chr7 (228-268)||(28824532-28824572)
chr7 (238-270)||(29855266-29855298)
chr7 (238-270)||(31445357-31445389)
chr7 (238-270)||(31711936-31711968)
chr7 (238-270)||(41018703-41018735)
chr7 (228-268)||(42204728-42204768)
chr7 (238-270)||(42584842-42584874)
chr7 (238-270)||(44496802-44496834)
chr7 (228-268)||(48866932-48866972)
[»] chr6 (26 HSPs)
chr6 (196-270)||(12044332-12044403)
chr6 (229-273)||(14094941-14094985)
chr6 (199-273)||(21506339-21506410)
chr6 (194-264)||(25924870-25924937)
chr6 (196-273)||(11785355-11785429)
chr6 (228-279)||(18792423-18792474)
chr6 (196-273)||(19789073-19789147)
chr6 (235-273)||(23633320-23633358)
chr6 (228-273)||(29383586-29383631)
chr6 (196-273)||(32729889-32729963)
chr6 (196-270)||(28965840-28965911)
chr6 (196-273)||(8778869-8778943)
chr6 (196-273)||(9188941-9189015)
chr6 (235-270)||(32644648-32644683)
chr6 (235-273)||(3821414-3821452)
chr6 (235-273)||(7693351-7693389)
chr6 (229-267)||(8395372-8395410)
chr6 (196-268)||(15722505-15722574)
chr6 (240-270)||(16368046-16368076)
chr6 (239-273)||(16743263-16743297)
chr6 (235-273)||(30253310-30253348)
chr6 (228-273)||(31480831-31480876)
chr6 (228-273)||(32853141-32853186)
chr6 (229-273)||(3800594-3800638)
chr6 (238-270)||(13423008-13423040)
chr6 (229-273)||(20712096-20712140)
[»] chr4 (63 HSPs)
chr4 (229-273)||(10096739-10096783)
chr4 (229-273)||(17363260-17363304)
chr4 (195-264)||(51224844-51224910)
chr4 (196-264)||(29513702-29513767)
chr4 (193-273)||(39881027-39881104)
chr4 (195-267)||(44165908-44165977)
chr4 (196-264)||(56025256-56025321)
chr4 (228-273)||(18874919-18874964)
chr4 (199-270)||(41170776-41170843)
chr4 (236-273)||(42882503-42882540)
chr4 (229-270)||(45274295-45274336)
chr4 (228-273)||(46566958-46567003)
chr4 (228-273)||(46794498-46794543)
chr4 (229-273)||(1688425-1688469)
chr4 (235-271)||(4514264-4514300)
chr4 (229-273)||(22920268-22920312)
chr4 (229-273)||(22971487-22971531)
chr4 (229-273)||(36081829-36081873)
chr4 (235-279)||(47540171-47540215)
chr4 (229-273)||(55595979-55596023)
chr4 (196-273)||(1562533-1562607)
chr4 (238-273)||(4511853-4511888)
chr4 (195-273)||(24772670-24772745)
chr4 (228-267)||(31275175-31275214)
chr4 (196-273)||(34116537-34116611)
chr4 (196-273)||(44272807-44272881)
chr4 (196-273)||(49424817-49424891)
chr4 (196-273)||(51717279-51717353)
chr4 (196-268)||(4896502-4896571)
chr4 (235-273)||(9472510-9472548)
chr4 (229-267)||(12241088-12241126)
chr4 (229-267)||(25523201-25523239)
chr4 (229-267)||(33820339-33820377)
chr4 (235-273)||(35332742-35332780)
chr4 (235-273)||(35580162-35580200)
chr4 (235-273)||(40308477-40308515)
chr4 (229-267)||(46911928-46911966)
chr4 (235-273)||(46912796-46912834)
chr4 (196-270)||(50890073-50890144)
chr4 (229-267)||(53583131-53583169)
chr4 (240-273)||(29577433-29577466)
chr4 (196-267)||(48722069-48722137)
chr4 (196-267)||(49768872-49768940)
chr4 (228-273)||(51296186-51296231)
chr4 (228-273)||(55927013-55927058)
chr4 (235-267)||(5386409-5386441)
chr4 (235-267)||(17475359-17475391)
chr4 (229-273)||(29525888-29525932)
chr4 (235-267)||(29891881-29891913)
chr4 (230-270)||(31048919-31048959)
chr4 (229-273)||(36512872-36512916)
chr4 (229-273)||(36812400-36812444)
chr4 (235-283)||(38382147-38382195)
chr4 (238-270)||(38792889-38792921)
chr4 (235-267)||(38952725-38952757)
chr4 (235-267)||(39606003-39606035)
chr4 (235-267)||(40409169-40409201)
chr4 (235-267)||(42490945-42490977)
chr4 (238-270)||(44257729-44257761)
chr4 (229-273)||(51397868-51397912)
chr4 (235-267)||(53357080-53357112)
chr4 (229-273)||(53763808-53763852)
chr4 (238-270)||(55601700-55601732)
[»] scaffold0511 (1 HSPs)
scaffold0511 (228-279)||(11667-11718)
[»] scaffold0020 (1 HSPs)
scaffold0020 (195-273)||(155905-155980)
[»] scaffold0014 (1 HSPs)
scaffold0014 (235-273)||(199302-199340)
[»] scaffold0002 (2 HSPs)
scaffold0002 (194-273)||(6425-6501)
scaffold0002 (228-273)||(440747-440792)
[»] scaffold0184 (1 HSPs)
scaffold0184 (196-273)||(16591-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (196-273)||(56179-56253)
[»] scaffold0060 (1 HSPs)
scaffold0060 (228-267)||(6846-6885)
[»] scaffold0011 (1 HSPs)
scaffold0011 (196-273)||(219661-219735)
[»] scaffold0504 (1 HSPs)
scaffold0504 (235-273)||(10732-10770)
[»] scaffold0054 (1 HSPs)
scaffold0054 (235-273)||(31597-31635)
[»] scaffold0238 (1 HSPs)
scaffold0238 (244-273)||(16436-16465)
[»] scaffold0115 (1 HSPs)
scaffold0115 (240-273)||(15185-15218)
[»] scaffold0041 (1 HSPs)
scaffold0041 (228-273)||(34437-34482)
[»] scaffold0532 (1 HSPs)
scaffold0532 (194-267)||(10962-11033)
[»] scaffold0204 (1 HSPs)
scaffold0204 (235-267)||(27375-27407)


Alignment Details
Target: chr8 (Bit Score: 181; Significance: 8e-98; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 425906 - 426175
Alignment:
Q  16 aatcacacgtttatcttccaataatgtttgatctctttgtgatgnnnnnnnnnnnngtcttaatcctctcatttgtagggaagggcaatatcaagtttaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||    
T  425906 aatcacacgtttatcttccaataatgtttgatctctttgtgatgttttttctttttgtcttaatcctctcatttgtagggaagggcaatatcaagtttaa 426005  T
Q  116 tagaaaggtaaataagtttgtctaacaattgtttcaattaagattcaaaatttctcaaataatttgtctttaatccaaat------------gagaaatg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||            ||||||||    
T  426006 tagaaaggtaaataagtttgtctaacaattgtttcaattaagattcaaattttctcaaataatttgtctttaatccaaattcattcataaaagagaaatg 426105  T
Q  204 atatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  426106 atatttatacaaccatttgggatcgacaaccttttgacaactttctctctcatactcacattatactctt 426175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 12045724 - 12045650
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| |    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  12045724 gagaaatgatatttgtacaaccatttagt---gacaacttttagacaactttctctctcatactcacattatattctt 12045650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 12959974 - 12960012
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12959974 ttttgacaactttctttctcatactcacattatattctt 12960012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 29509264 - 29509337
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| |||||||||||||| |||||    
T  29509264 atgagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacatgatatt 29509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 40719714 - 40719641
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattct 272  Q
    |||||||||||||| |||||||||||   |   |||||||||||||||||||||||||||||||| |||||| ||||    
T  40719714 gagaaatgatatttgtacaaccattttcta---acaaccttttgacaactttctttctcatactcgcattatcttct 40719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 44380685 - 44380612
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattct 272  Q
    |||||||||||||| ||||||||||| |    ||||||||||  |||||||||| ||||||||||||||||||||||    
T  44380685 gagaaatgatatttgtacaaccattttgt---gacaacctttaaacaactttctctctcatactcacattatattct 44380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 21418634 - 21418589
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||    
T  21418634 gacaaccttttgacaactttctctctcatactcacattatactctt 21418589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 27630890 - 27630971
Alignment:
Q  189 tccaaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| |||||||||||||| |||| ||||||   || |||||  ||||||||||||||| |||||||||||||||||||||||    
T  27630890 tccaaaagagaaatgatatttgtacatccatttt--at-gacaattttttgacaactttctctctcatactcacattatattctt 27630971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 12659082 - 12659126
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  12659082 acaactttttgacaactttctctctcatactcacattatattctt 12659126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 10653818 - 10653780
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  10653818 ttttgacaactttctttctcatactaacattatattctt 10653780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 37392163 - 37392125
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37392163 ttttgacaactttctctctcatactcacattatattctt 37392125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 16808611 - 16808660
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattcttcatct 278  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  16808611 acaactttttgacaactttctatctcatactcacattatcttcttaatct 16808660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 45101396 - 45101464
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| |||||||| || |    |||||| ||||||||||||||| |||||||||||||||||    
T  45101396 gagaaatgatatttgtacaaccactttgt---gacaactttttgacaactttctctctcatactcacattat 45101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 9550448 - 9550404
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  9550448 acaactttttgacaactttctctctcatactcacattatcttctt 9550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 26026894 - 26026965
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||  ||||||||||    | |||||| ||| ||||||||||||||||||||||||||||||    
T  26026894 atgagaaatgatatttgaacaaccatttt---ttgacaacttttgtgacaactttctttctcatactcacattat 26026965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 40464992 - 40465028
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattc 271  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40464992 ttttgacaactttctctctcatactcacattatattc 40465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 42443104 - 42443175
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| ||||| ||||| |    |||||| ||| ||||||||||| ||||||||||||||||||||    
T  42443104 gagaaatgatatttgtacaatcatttagt---gacaacttttagacaactttctctctcatactcacattatatt 42443175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 42543551 - 42543482
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||||| |||||||| ||| |||    ||| |||| |||||||||||||||| |||||||||||    
T  42543551 atgagaaatgatatttgtacaaccacttgtgat----aacttttttacaactttctttctcaaactcacattat 42543482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 5642425 - 5642390
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5642425 ttttgacaactttctctctcatactcacattatatt 5642390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 5644366 - 5644331
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5644366 ttttgacaactttctctctcatactcacattatatt 5644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 11879532 - 11879493
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  11879532 gacaactttttgacaactttctctctcatactcacattat 11879493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 11896948 - 11896909
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  11896948 gacaactttttgacaactttctctctcatactcacattat 11896909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 42047335 - 42047409
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||| | || ||   ||||| |||||||||| ||||| |||||||||||||||||| ||||    
T  42047335 gagaaatgatatttgtacaactactttgg---gacaatcttttgacaattttctctctcatactcacattatactctt 42047409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 6004984 - 6005018
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  6004984 gacaactttctctctcatactcacattatattctt 6005018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 9431320 - 9431282
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  9431320 ttttgacaactttctctctcatactcacattacattctt 9431282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 14548854 - 14548820
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  14548854 gacaactttctctctcatactcacattatattctt 14548820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 20852959 - 20852993
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||| ||||||||||    
T  20852959 gacaactttctttctcatactcacgttatattctt 20852993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 25830318 - 25830245
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| |||||||||||   |   ||||| ||| |||||||||||| ||||||||||||||||||||    
T  25830318 tgagaaatgatatttgtacaaccattttcta---acaacttttgtgacaactttctctctcatactcacattatatt 25830245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 29910247 - 29910209
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  29910247 ttttgacaactttctctttcatactcacattatattctt 29910209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 37210090 - 37210052
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  37210090 acaactttttgacaactttctctctcatactcacattat 37210052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 38174264 - 38174230
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  38174264 gacaactttctctctcatactcacattatattctt 38174230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 42716356 - 42716394
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  42716356 ttttgacaactttctctctcatactcacattatcttctt 42716394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 43715875 - 43715946
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||||||||||    || | ||| ||| |||||||||||| ||||||||||||||||||||    
T  43715875 gagaaatgatatttgtacaaccattt----tctaaaacttttgtgacaactttctctctcatactcacattatatt 43715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 11789838 - 11789871
Alignment:
Q  238 tgacaactttctttctcatactcacattatattc 271  Q
    |||||||||||||||| |||||||||||||||||    
T  11789838 tgacaactttctttcttatactcacattatattc 11789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 16699639 - 16699571
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| ||||||||||||| |   ||||| ||  ||||||||||| ||||||||||| |||||    
T  16699639 gagaaatgatatttgtacaaccatttggta---acaactttgagacaactttctctctcatactcatattat 16699571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 30578295 - 30578328
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||| ||||||||||    
T  30578295 acaactttctttctcatactcacgttatattctt 30578328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 35067160 - 35067232
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||||||||||   |   ||||| ||| |||||||||||| ||||||||||||||||||||    
T  35067160 gagaaatgatatttgtacaaccatttctta---acaacttttgtgacaactttctctctcatactcacattatatt 35067232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 35937585 - 35937517
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacatt 265  Q
    |||||||||||||||| ||||||||||| | |   ||||| ||| ||||||||||| |||||| ||||||||    
T  35937585 atgagaaatgatatttgtacaaccattttgta---acaacttttggacaactttctctctcatgctcacatt 35937517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 324129 - 324085
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| | |||||||||||||||||| || |||||    
T  324129 ttttgacaactttctctgtcatactcacattatattattaatctc 324085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 1796524 - 1796556
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||| ||||    
T  1796524 tgacaactttctttctcatactcacattttatt 1796556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 6440121 - 6440153
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  6440121 tgacaactttctctctcatactcacattatatt 6440153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 24116076 - 24116108
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||||||||||| |||||||    
T  24116076 ttttgacaactttctttctcatacttacattat 24116108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 32174990 - 32175022
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  32174990 ttttgacaactttctctctcatactcacattat 32175022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 34970237 - 34970281
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||    
T  34970237 acaactttttgacaactttctctctcatactcacaagatattctt 34970281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 35818973 - 35819005
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  35818973 ttttgacaactttctctctcatactcacattat 35819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 42658670 - 42658714
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| |||||||||| ||||||||| || |||||    
T  42658670 ttttgacaactttctctctcatactcgcattatattattaatctc 42658714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 43285994 - 43285962
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  43285994 tgacaactttctctctcatactcacattatatt 43285962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 45081105 - 45081149
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||  ||||||| ||||||||||||||| |||||    
T  45081105 ttttgacaactttccctctcatattcacattatattcttaatctc 45081149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 7949788 - 7949856
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    ||||||||||||||||| ||||||||||| |   | ||||| ||||||||||||||||||||||||||||||    
T  7949788 aatgagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctttctcatactcacat 7949856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 36869908 - 36869834
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||    | |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  36869908 gagaaatgatatttgtacaaccatttt---ttgacaacttttagacaactttctctctcatactcacattatattctt 36869834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 462475 - 462398
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||| ||||||||||| |    |||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  462475 aatgagaaatgatatttgtacaaccattttgt---gacaacttttagacaactttctctctcatactcacgttatattctt 462398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 41877684 - 41877753
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    |||||||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| ||||||||||||||    
T  41877684 aaatgagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacat 41877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 43900798 - 43900754
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  43900798 acaactttttgacaactttctctctcatactcacattatattctt 43900754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 1901997 - 1901923
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  1901997 gagaaatgatatttgtacaaccactttgt---gacaacttttagacaactttctctctcatactcacattatattctt 1901923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 1911443 - 1911369
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  1911443 gagaaatgatatttgtacaaccactttgt---gacaacttttagacaactttctctctcatactcacattatattctt 1911369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 45150337 - 45150263
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| ||||||||| |||| |    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  45150337 gagaaatgatacttatacaactattttgt---gacaacttttagacaactttctctctcatactcacattatattctt 45150263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 14207407 - 14207449
Alignment:
Q  231 aaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  14207407 aaccttttgacaactttctctctcatactcacattatactctt 14207449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 14215155 - 14215197
Alignment:
Q  231 aaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  14215155 aaccttttgacaactttctctctcatactcacattatactctt 14215197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 22153900 - 22153938
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22153900 ttttgacaactttctctctcatactcacattatattctt 22153938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 34733333 - 34733291
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  34733333 gacaactttttgacaactttctttcacatactcacattatatt 34733291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 7256 - 7211
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  7256 gacaacttttggacaactttctctctcatactcacattatattctt 7211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 622501 - 622460
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  622501 acaactttttgacaactttctctctcatactcacattatatt 622460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 44334842 - 44334801
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  44334842 acaactttttgacaactttctctctcatactcacattatatt 44334801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 26279913 - 26279953
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  26279913 gacaactttttgacaactttctctctcatactcacattata 26279953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 32008063 - 32008107
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||    
T  32008063 acaactttttgacaactttctctctcatactcgcattatattctt 32008107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 32457827 - 32457752
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||| ||    | |||||| || |||||||||||| |||||||||||||||||| ||||    
T  32457827 tgagaaatgatatttgtacaaccacttt---ttgacaactttgtgacaactttctctctcatactcacattatactctt 32457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 32981192 - 32981121
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||| |||||| ||||||||||| |    |||||| ||| ||||||||||| ||||||||||||||||||||    
T  32981192 gagaaattatatttgtacaaccatttagt---gacaacttttagacaactttctctctcatactcacattatatt 32981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 35425713 - 35425669
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||    
T  35425713 acaactttttgacaactttatctctcatactcacattatattctt 35425669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 47988526 - 47988482
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  47988526 acaactttttgacaactttctctctcatactcacattatcttctt 47988482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 47997813 - 47997769
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  47997813 acaactttttgacaactttctctctcatactcacattatcttctt 47997769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 48007100 - 48007056
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  48007100 acaactttttgacaactttctctctcatactcacattatcttctt 48007056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 49021751 - 49021783
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||||||||    
T  49021751 tgacaactttctttctcatactcacattatatt 49021783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 6126483 - 6126522
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  6126483 gacaactttttgacaactttctctctcatactcacattat 6126522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 7867782 - 7867708
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||| |||| |    |||||| |||  |||| |||||||||||||||||||||||||||||    
T  7867782 gagaaatgatatttgtacaactattttgt---gacaacttttaaacaattttctttctcatactcacattatattctt 7867708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 11173487 - 11173526
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  11173487 gacaactttttgacaactttctttctcatactcatattat 11173526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 21579114 - 21579188
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||| ||   |   ||||| || |||||| ||||| |||||||||||||||||||||||    
T  21579114 gagaaatgatatttatacaaccaatttcta---acaactttatgacaattttctctctcatactcacattatattctt 21579188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 37303148 - 37303077
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||| |||||||| ||    || ||||| ||||||||||||||| |||||||||||||||||    
T  37303148 aatgagaaatgatatttgtacaaccactttc--tc-acaactttttgacaactttctctctcatactcacattat 37303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 41877682 - 41877608
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||| ||||||||||||||| | |||||||||||||||||| ||||    
T  41877682 gagaaatgatatttgtacaaccactttgt---gacacccttttgacaactttttctctcatactcacattatactctt 41877608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 45529013 - 45528939
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||| ||||    | |||||| ||| ||||| |||||||||||||||||||||| ||||||    
T  45529013 gagaaatgatatttgtacaactatttt---ttgacaacttttagacaaatttctttctcatactcacattagattctt 45528939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 51032695 - 51032621
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||| ||||| ||||||||||||||||| |||||    
T  51032695 gagaaatgatatttgtacaaccattttcta---acaactttttgacaattttctctctcatactcacattatcttctt 51032621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 51672899 - 51672934
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||||| ||||||||||||||||||    
T  51672899 ttttgacaactttctttttcatactcacattatatt 51672934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 8868912 - 8868946
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  8868912 gacaactttctctctcatactcacattatattctt 8868946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 28269836 - 28269874
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  28269836 acaacttttttacaactttctttctcatactcacattat 28269874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 48176880 - 48176850
Alignment:
Q  240 acaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||||||    
T  48176880 acaactttctttctcatactcacattatatt 48176850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 48649610 - 48649648
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  48649610 acaactttttgacaactttctctctcatactcacattat 48649648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 108431 - 108499
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| |||||||| || |    |||||  ||||||||||||||| |||||||||||||||||    
T  108431 gagaaatgatatttgtacaaccactttgt---gacaattttttgacaactttctctctcatactcacattat 108499  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 1834547 - 1834580
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  1834547 acaactttctctctcatactcacattatattctt 1834580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 3484800 - 3484833
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  3484800 acaactttctctctcatactcacattatattctt 3484833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 16969643 - 16969569
Alignment:
Q  190 ccaaatgagaaatgatatttatacaaccatttgggatcgacaac-cttttgacaactttctttctcatactcacattat 267  Q
    |||| |||||||||||||||  ||||||||||    | ||||||  ||||||||||||||| |||||||||||||||||    
T  16969643 ccaattgagaaatgatattttaacaaccattt----ttgacaacttttttgacaactttctctctcatactcacattat 16969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 29846921 - 29846888
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  29846921 acaactttctctctcatactcacattatattctt 29846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 37303414 - 37303451
Alignment:
Q  230 caaccttttgacaactttctttctcatactcacattat 267  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  37303414 caactttttgacaactttctctctcatactcacattat 37303451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 37852635 - 37852602
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||||||| ||||||    
T  37852635 acaactttctttctcatactcacattacattctt 37852602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 40785729 - 40785696
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  40785729 acaactttctctctcatactcacattatattctt 40785696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 43149373 - 43149340
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||| |||||    
T  43149373 acaactttctttctcatactcacattatcttctt 43149340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 46473128 - 46473196
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| |||||||| || |   ||||||| |||| |||| ||||| |||||||||||||||||    
T  46473128 gagaaatgatatttgtacaaccactttg---cgacaactttttaacaattttctctctcatactcacattat 46473196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 5340137 - 5340169
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||| |||||||||||||||    
T  5340137 ttttgacaactttctttttcatactcacattat 5340169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 29917055 - 29917023
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  29917055 tgacaactttctctctcatactcacattatatt 29917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 29966208 - 29966176
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  29966208 tgacaactttctctctcatactcacattatatt 29966176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 35554150 - 35554118
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  35554150 ttttgacaactttctctctcatactcacattat 35554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 36442252 - 36442284
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  36442252 ttttgacaactttctctctcatactcacattat 36442284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 40159879 - 40159835
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||||    
T  40159879 acaactttttgacaactttctctctcagactcacattatcttctt 40159835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 42104494 - 42104534
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  42104494 gacaactttttaacaactttctttcacatactcacattata 42104534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 45293060 - 45293028
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  45293060 tgacaactttctctctcatactcacattatatt 45293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 15639384 - 15639459
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||    |||||| ||| ||||||||| | |||||||||||||||||||||||    
T  15639384 tgagaaatgatatttgtacaaccatttggt---gacaacttttagacaactttttctctcatactcacattatattctt 15639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 2456062 - 2456100
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2456062 ttttgacaactttctatctcatactcacattatattctt 2456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 33910123 - 33910085
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33910123 ttttgacaactttctctctcatactcacattatattctt 33910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 34381011 - 34381080
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||| || |    |||||| ||||||||||||||| |||||||||||||||||    
T  34381011 tgagaaatgatatttgtacaaccactttgt---gacaactttttgacaactttctctctcatactcacattat 34381080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 42909749 - 42909787
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  42909749 acaactttttgacaactttctttctcatactcacattat 42909787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 91244 - 91289
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  91244 gacaacttttggacaactttctctctcatactcacattatattctt 91289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 6046343 - 6046384
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  6046343 acaactttttgacaactttctctctcatactcacattatatt 6046384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 28903987 - 28904075
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattcttcatctcactc 283  Q
    |||||||||||||||||| ||||||||  | |    |||||| ||| ||||||||||| ||||||||||||||| |||||||  ||||||||    
T  28903987 aaatgagaaatgatatttgtacaaccacattgt---gacaacttttagacaactttctctctcatactcacattctattcttactctcactc 28904075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 28940382 - 28940470
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattcttcatctcactc 283  Q
    |||||||||||||||||| ||||||||  | |    |||||| ||| ||||||||||| ||||||||||||||| |||||||  ||||||||    
T  28940382 aaatgagaaatgatatttgtacaaccacattgt---gacaacttttagacaactttctctctcatactcacattctattcttactctcactc 28940470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 40223860 - 40223788
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||| |||||| |||||||| || |    |||||| ||||||||||||||| |||||||||||||||||    
T  40223860 aaatgagaaattatatttgtacaaccactttgt---gacaactttttgacaactttctctctcatactcacattat 40223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 2117665 - 2117621
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| || |||||||||||| |||||||||||||||||||||||    
T  2117665 acaactttgtgacaactttctctctcatactcacattatattctt 2117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 20591509 - 20591465
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||    
T  20591509 ttttgacaactttctctctcatactcacgttatattcttaatctc 20591465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 21023328 - 21023372
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  21023328 acaactttttgacaactttctctctcatactcacattattttctt 21023372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 22098252 - 22098327
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||||| |||||||||||   |   ||||| ||| |||||||||||| ||||||||||||||||||||    
T  22098252 aatgagaaatgatatttgtacaaccattttcta---acaacttttgtgacaactttctctctcatactcacattatatt 22098327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 26660482 - 26660411
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||| |||||| |    |||||| | ||||||||||||| ||||||||||||||||||||    
T  26660482 gagaaatgatatttgtacatccattttgt---gacaacttcttgacaactttctctctcatactcacattatatt 26660411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 26932074 - 26932003
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||| |||||| |    |||||| | ||||||||||||| ||||||||||||||||||||    
T  26932074 gagaaatgatatttgtacatccattttgt---gacaacttcttgacaactttctctctcatactcacattatatt 26932003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 31329167 - 31329123
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||    
T  31329167 acaactttttgacaactttctctatcatactcacattatattctt 31329123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 31708369 - 31708444
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||   |   ||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  31708369 tgagaaatgatatttgtacaaccattttata---acaactttttgacaactttctctctcatactcatattaaattctt 31708444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 36713249 - 36713178
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||||||| || |    |||||| | ||||||||||||| ||||||||||||||||||||    
T  36713249 gagaaatgatatttgtacaaccactttgt---gacaacttcttgacaactttctctctcatactcacattatatt 36713178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 39191869 - 39191825
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||    
T  39191869 ttttgacaactttctctcttatactcacattatattcttaatctc 39191825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 39840750 - 39840706
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  39840750 acaactttttgacaaatttctctctcatactcacattatattctt 39840706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 13734392 - 13734357
Alignment:
Q  238 tgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||| |||||||||||||||||||||||    
T  13734392 tgacaactttctctctcatactcacattatattctt 13734357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 19271859 - 19271933
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| | |   ||||| ||| ||||||||||| |||||||||||||| || |||||    
T  19271859 gagaaatgatatttgtacaaccattttgta---acaacgtttagacaactttctctctcatactcacatgatgttctt 19271933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 33626673 - 33626638
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  33626673 ttttgacaactttctctctcatactcacattatatt 33626638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 471844 - 471882
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  471844 acaactttttgacaactttctttctcatactcatattat 471882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 6964401 - 6964363
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  6964401 ttttgacaactttctctctcatactcacattatactctt 6964363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 27340905 - 27340943
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  27340905 ttttgacaattttctctctcatactcacattatattctt 27340943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 31025040 - 31025002
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  31025040 ttttaacaactttctctctcatactcacattatattctt 31025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 33743368 - 33743330
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  33743368 ttttgacaactttctctctcatacttacattatattctt 33743330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 8725452 - 8725419
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  8725452 acaactttctctctcatactcacattatattctt 8725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 19376174 - 19376129
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| |||||| |||||||| |||||||||||||||||| ||||    
T  19376174 gacaactttttgataactttctctctcatactcacattatactctt 19376129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 20040829 - 20040862
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||||| |||||||||||||||||||||    
T  20040829 acaactttctttttcatactcacattatattctt 20040862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 25255283 - 25255332
Alignment:
Q  230 caaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||| |||| |||||||||| ||||||| ||||||||||||||| |||||    
T  25255283 caactttttaacaactttctatctcatattcacattatattcttaatctc 25255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 25319073 - 25319122
Alignment:
Q  230 caaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||| |||| |||||||||| ||||||| ||||||||||||||| |||||    
T  25319073 caactttttaacaactttctatctcatattcacattatattcttaatctc 25319122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 32873190 - 32873149
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  32873190 acaactttttgacaactttctctatcatactcacattatatt 32873149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Original strand, 41321294 - 41321323
Alignment:
Q  238 tgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||||||||||||||||    
T  41321294 tgacaactttctttctcatactcacattat 41321323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Complemental strand, 5698356 - 5698328
Alignment:
Q  242 aactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||||    
T  5698356 aactttctttctcatactcacattatatt 5698328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 9636187 - 9636155
Alignment:
Q  241 caactttctttctcatactcacattatattctt 273  Q
    ||||||||| |||||||||||||||||||||||    
T  9636187 caactttctctctcatactcacattatattctt 9636155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 10232531 - 10232567
Alignment:
Q  231 aaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  10232531 aaccttttgacaactttctctctcatattcacattat 10232567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 11881028 - 11880984
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| ||||||||||||||||| |||||    
T  11881028 acaacttttagacaactttctctctcatactcacattatcttctt 11880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 12661982 - 12661950
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  12661982 ttttgacaactttctctctcatactcacattat 12661950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 14206425 - 14206457
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  14206425 ttttgacaactttctctctcatactcacattat 14206457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 18638866 - 18638822
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| ||| | |||||||||||||||||||||||    
T  18638866 acaactttttgacaaatttatctctcatactcacattatattctt 18638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 22647602 - 22647558
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||| ||||||| |||||||||||    
T  22647602 acaactttttgacaactttctctcttatactcatattatattctt 22647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 27546103 - 27546135
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||| ||||||||||||||||||||||    
T  27546103 tgacaactttatttctcatactcacattatatt 27546135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 35172364 - 35172332
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||| ||||    
T  35172364 tgacaactttctttctcatactcacattgtatt 35172332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 39458693 - 39458725
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  39458693 ttttgacaactttctctctcatactcacattat 39458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 40364608 - 40364640
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  40364608 tgacaactttctctctcatactcacattatatt 40364640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 30530645 - 30530574
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||| |    |||||| ||| ||||||||||| ||||||||||||||||||||    
T  30530645 gagaaatgatatttatacaaccattttgt---gacaacttttagacaactttctctctcatactcacattatatt 30530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 5975573 - 5975617
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  5975573 ttttgacaactttctctctcatactcacattatattcttaatctc 5975617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 49189279 - 49189208
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| ||||||||||| |   | ||||| ||||||||||||||||||||||||||| || |||||    
T  49189279 gagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctttctcatactcatatgatatt 49189208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 27352630 - 27352704
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| |    || ||| ||| ||||||||||| |||||||||||||||||||||||    
T  27352630 gagaaatgatatttgtacaaccattttgt---gataacttttggacaactttctctctcatactcacattatattctt 27352704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 39815346 - 39815420
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||| |||||| ||||||||||| |   | ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  39815346 gagaaattatatttgtacaaccattttg---ctacaacttttggacaactttctctctcatactcacattatattctt 39815420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 366652 - 366731
Alignment:
Q  191 caaatgagaaatgatatttatacaaccatttgggatc-gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| ||||||||||||||||||||||| ||    || || ||| ||||||||||||||| |||||||||||||||||| ||||    
T  366652 caaaagagaaatgatatttatacaaccactt----tctgataactttttgacaactttctctctcatactcacattatactctt 366731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 25098862 - 25098785
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||| |||||||| || | |   ||||| ||| |||||| |||| |||||||||||||||||||||||    
T  25098862 aatgagaaatgatatttgtacaaccactttgta---acaacttttagacaaccttctctctcatactcacattatattctt 25098785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 30196750 - 30196788
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  30196750 ttttgacaactttctctctcatactcacattatattctt 30196788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 49596271 - 49596309
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  49596271 ttttgacaactttctctctcatactcacattatattctt 49596309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Original strand, 16658434 - 16658522
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattcttcatctcactc 283  Q
    |||||||||||||||||| ||||||||  | |    |||||| ||| ||||||||||| ||||||||||||||| |||||||  ||||||||    
T  16658434 aaatgagaaatgatatttgtacaaccacattgt---gacaacttttagacaactttctctctcatactcacattctattcttactctcactc 16658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 33422260 - 33422219
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  33422260 acaactttttgacaactttctctctcatactcacattatatt 33422219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 52417561 - 52417602
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  52417561 acaactttttgacaactttctctctcatactcacattatatt 52417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 4154617 - 4154661
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||    
T  4154617 ttttgacaactttctctctcatactcatattatattcttaatctc 4154661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 8464554 - 8464510
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  8464554 acaactttttgacaattttctctctcatactcacattatattctt 8464510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 21441666 - 21441710
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||    
T  21441666 acaactttttgacaactttctctctcatactcacattacattctt 21441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 24611874 - 24611918
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||    
T  24611874 acaactttttgacaactttctctctcatactcaccttatattctt 24611918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 27810288 - 27810244
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||    
T  27810288 acaactttttgacaactttctctctcatactcacattacattctt 27810244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 30530440 - 30530396
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||    
T  30530440 acaactttttaacaactttctctctcatactcacattatattctt 30530396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 36954694 - 36954726
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||||||||||||||||||||||    
T  36954694 ttttgacaactttctttctcatactcacattat 36954726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 50226963 - 50226876
Alignment:
Q  183 ctttaatccaaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| ||||| | |||||||||||||| |||||||| || |    |||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  50226963 ctttcatccataagagaaatgatatttgtacaaccactttgt---gacaactttttgacaactttctctctcatactcgcattatactctt 50226876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 8905758 - 8905797
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattata 268  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  8905758 acaaccttttgacaactttctatctcatacttacattata 8905797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 9445106 - 9445176
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||||  ||||||||||| | |   ||||| ||||||||||||||| | |||||||||||||||    
T  9445106 atgagaaatgatattcgtacaaccattttgta---acaactttttgacaactttctctttcatactcacattat 9445176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 15059676 - 15059711
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  15059676 ttttgacaactttctctctcatactcacattatatt 15059711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 18541122 - 18541048
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||||||||| ||||||| ||||||||| |||||    
T  18541122 gagaaatgatatttgtacaaccattttcta---acaactttttgacaactttctctctcatattcacattatcttctt 18541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 25989055 - 25988981
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  25989055 gagaaatgatatttgtacaaccatttttta---acaacttttagacaattttctctctcatactcacattatattctt 25988981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 40596086 - 40596051
Alignment:
Q  238 tgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||| |||||||||||||||||||||||    
T  40596086 tgacaactttctctctcatactcacattatattctt 40596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 44112490 - 44112525
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44112490 ttttgacaactttctctctcatactcacattatatt 44112525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Complemental strand, 44641938 - 44641903
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44641938 ttttgacaactttctctctcatactcacattatatt 44641903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 44950463 - 44950412
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||| |||||    
T  44950463 gacaactttttaacaactttctctttcatactcacattatattcttaatctc 44950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 1615066 - 1615104
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  1615066 acaactttttaacaactttctttctcatactcacattat 1615104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 1724267 - 1724229
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  1724267 ttttgacaactttctctctcatacttacattatattctt 1724229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 12489616 - 12489578
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12489616 ttttgacaactttctctctcatattcacattatattctt 12489578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 29254097 - 29254063
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  29254097 gacaactttctctctcatactcacattatattctt 29254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 33669844 - 33669806
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  33669844 ttttgacaactttttctctcatactcacattatattctt 33669806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 34941951 - 34941917
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  34941951 gacaactttctctctcatactcacattatattctt 34941917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 36930785 - 36930751
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  36930785 gacaactttctctctcatactcacattatattctt 36930751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 39010844 - 39010882
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  39010844 acaactttttgacaactttctctctcatactcacattat 39010882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 50141976 - 50141938
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  50141976 acaactttttgacaactttctctctcatactcacattat 50141938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 51250310 - 51250272
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  51250310 ttttgacaactttctctctcatactcacgttatattctt 51250272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 51339769 - 51339700
Alignment:
Q  198 gaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| |||||||| || | |   ||||| ||| ||||||||||||||||||||||||||| ||||    
T  51339769 gaaatgatatttgtacaaccactttgta---acaacttttagacaactttctttctcatactcacattctatt 51339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 3606167 - 3606091
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||| |||||||| ||   |   ||||| ||||||||||||||| | ||||||||| |||||||||||    
T  3606167 atgagaaatgatatttgtacaaccaatttcta---acaactttttgacaactttctctatcatactcatattatattctt 3606091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 21255827 - 21255782
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||| | |||||||||||||||||||||||    
T  21255827 gacaacttttagacaactttttctctcatactcacattatattctt 21255782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 37843474 - 37843429
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| || |||||||||||| |||||||||||||||||| ||||    
T  37843474 gacaactttgtgacaactttctctctcatactcacattatactctt 37843429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 50460742 - 50460709
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||| |||||    
T  50460742 acaactttctttctcatactcacattatcttctt 50460709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 15470091 - 15470059
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  15470091 ttttgacaactttctctctcatactcacattat 15470059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 21728275 - 21728231
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||| ||||| |||||    
T  21728275 acaactttttgacaactttctctctcatactcatattatcttctt 21728231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 24775005 - 24775049
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| |||||  ||||||||||||||||||||||    
T  24775005 acaactttttgacaattttctcactcatactcacattatattctt 24775049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 30536031 - 30536063
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  30536031 tgacaactttctctctcatactcacattatatt 30536063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 33100844 - 33100876
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  33100844 ttttgacaactttctctctcatactcacattat 33100876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 36690607 - 36690575
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  36690607 ttttgacaactttctctctcatactcacattat 36690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 36706708 - 36706676
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  36706708 ttttgacaactttctctctcatactcacattat 36706676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 40139154 - 40139186
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  40139154 tgacaactttctctctcatactcacattatatt 40139186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 44672071 - 44672027
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| ||||| ||||||||||||||||| |||||    
T  44672071 acaactttttgacaattttctctctcatactcacattatcttctt 44672027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 45272195 - 45272163
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  45272195 ttttgacaactttctctctcatactcacattat 45272163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 50017464 - 50017420
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||| ||| |||||||    
T  50017464 acaactttttgacaactttctctctcatactcatattctattctt 50017420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 52437534 - 52437566
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  52437534 tgacaactttctctctcatactcacattatatt 52437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 2308393 - 2308319
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| ||    | |||||||||||||||||||| | |||||||||||||||||||||||    
T  2308393 gagaaatgatatttgtacaaccaattt---ttgacaaccttttgacaactttatctctcatactcacattatattctt 2308319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 30856803 - 30856881
Alignment:
Q  192 aaatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||| |||||||| || |    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  30856803 aaatgagaaatgatatttgtacaaccactttgt---gacaacttttagacaactttctctctcatactcacattatattctt 30856881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 42665853 - 42665809
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  42665853 acaactttttgacaactttctctctcatactcacattatattctt 42665809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 7498062 - 7497991
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||||||||||   ||  ||||| ||||||||||||||| ||||||||||||||||||||    
T  7498062 gagaaatgatatttgtacaaccatttt--att-acaactttttgacaactttctctctcatactcacattatatt 7497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 31635881 - 31635807
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  31635881 gagaaatgatatttgtacaaccattttcta---acaactttttgacaactttctctctcatactcacattatcttctt 31635807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 38600850 - 38600893
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatct 278  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  38600850 ttttgacaactttctctctcatactcacattatattcttaatct 38600893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 28165128 - 28165209
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||||||||| || ||||||||||| |    |||||| ||| ||||| ||||| ||||||||||||||||||||||| |||||    
T  28165128 tgagaaatgatacttgtacaaccattttgt---gacaacttttagacaattttctctctcatactcacattatattcttaatctc 28165209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 4842562 - 4842517
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  4842562 gacaacttttagacaactttctctctcatactcacattatattctt 4842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 5455495 - 5455450
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||    
T  5455495 gacaaccttttgacaactttctctcttatactcacattatcttctt 5455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 14797691 - 14797647
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||    
T  14797691 acaactttttgacaactttctctctcatactcacattacattctt 14797647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 18619438 - 18619394
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  18619438 acaactttttgacaactttctctctcgtactcacattatattctt 18619394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 23358620 - 23358576
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  23358620 acaacttttagacaactttctctctcatactcacattatattctt 23358576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 24361521 - 24361561
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatat 269  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  24361521 acaactttttgacaactttctatctcatactcacattatat 24361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 40496386 - 40496430
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    ||||||||||||||| |||||||||||||||||||| || |||||    
T  40496386 ttttgacaactttctctctcatactcacattatattattaatctc 40496430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 41868410 - 41868366
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  41868410 acaactttttgacaactttctctctcatactcacattatcttctt 41868366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 42532770 - 42532738
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||||||||    
T  42532770 tgacaactttctttctcatactcacattatatt 42532738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 42554806 - 42554850
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||    
T  42554806 acaacttttttacaactttctctctcatactcacattatattctt 42554850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 11980651 - 11980725
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||||||| | ||||||||||||||||| |||||    
T  11980651 gagaaatgatatttgtacaaccattttcta---acaactttttgacaactttttatctcatactcacattatcttctt 11980725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 15283321 - 15283247
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||  ||| ||||||||||| |||||||||||||||||||||||    
T  15283321 gagaaatgatatttgtacaaccactttgt---gacaatttttagacaactttctctctcatactcacattatattctt 15283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 1889183 - 1889221
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  1889183 ttttgacaactttctctctcatactcacattatactctt 1889221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 4263899 - 4263861
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  4263899 ttttgacaactttctctttcatactcacattatattctt 4263861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 5191729 - 5191691
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  5191729 ttttaacaactttctctctcatactcacattatattctt 5191691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 7086165 - 7086127
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  7086165 acaactttttgacaactttctctctcatactcacattat 7086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 8555322 - 8555288
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  8555322 gacaactttctctctcatactcacattatattctt 8555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 11442708 - 11442746
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  11442708 ttttgacaactttctctctcatactcatattatattctt 11442746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 23045126 - 23045164
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  23045126 ttttgacaactttctctctcatactcacattatactctt 23045164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 32688579 - 32688541
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  32688579 ttttgacaactttctctctcatactcacattatactctt 32688541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 33857253 - 33857291
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  33857253 ttttgacaactttctctctcatactcacatgatattctt 33857291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 35965611 - 35965649
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  35965611 ttttgacaactttctctttcatactcacattatattctt 35965649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 36795766 - 36795804
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  36795766 ttttgacaactttctctttcatactcacattatattctt 36795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 546426 - 546385
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  546426 acaactttttaacaactttctctctcatactcacattatatt 546385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 221
Target Start/End: Original strand, 15678169 - 15678198
Alignment:
Q  192 aaatgagaaatgatatttatacaaccattt 221  Q
    ||||||||||||||||||||||||||||||    
T  15678169 aaatgagaaatgatatttatacaaccattt 15678198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Complemental strand, 22353207 - 22353178
Alignment:
Q  238 tgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||||||||||||||||    
T  22353207 tgacaactttctttctcatactcacattat 22353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 34262059 - 34262018
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  34262059 acaaccttttgataactttttctctcatactcacattatatt 34262018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 36587539 - 36587471
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||  ||||||||||    | |||||  ||||||||||||||| |||||||||||||||||    
T  36587539 gagaaatgatatttgaacaaccatttt---ttgacaattttttgacaactttctctctcatactcacattat 36587471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 40951222 - 40951267
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| |||||||||||  ||||||||||||||||||||||    
T  40951222 gacaacttttagacaactttctcactcatactcacattatattctt 40951267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 4723596 - 4723640
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| ||||||||||||||||| |||||    
T  4723596 acaacttttttacaactttctctctcatactcacattatcttctt 4723640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 6639513 - 6639469
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| |||||||||||||||||| ||||    
T  6639513 acaactttttaacaactttctctctcatactcacattatactctt 6639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 9194469 - 9194501
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  9194469 tgacaactttctctctcatactcacattatatt 9194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 29449251 - 29449283
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  29449251 tgacaactttctctctcatactcacattatatt 29449283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 30996764 - 30996796
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  30996764 ttttgacaactttctctctcatactcacattat 30996796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 36625128 - 36625160
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  36625128 tgacaactttctctctcatactcacattatatt 36625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 4315 - 4389
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   || || ||| ||||||||||||||| |||||||||||||||||||||||    
T  4315 gagaaatgatatttgtacaaccatttt--at-gataactttttgacaactttctatctcatactcacattatattctt 4389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 38547325 - 38547287
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38547325 ttttgacaactttctttctcatactcacattatattctt 38547287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 19426580 - 19426648
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| ||||||||||| |    |||||| ||||||||||||||| |||||||||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgt---gacaactttttgacaactttctctctcatactcacattat 19426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 4971290 - 4971364
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| |    |||||| |||  |||||||||| |||||||||||||||||||||||    
T  4971290 gagaaatgatatttgtacaaccattttgt---gacaacttttatacaactttctctctcatactcacattatattctt 4971364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 27688676 - 27688711
Alignment:
Q  238 tgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||||||||||||||||    
T  27688676 tgacaactttctttctcatactcacattatattctt 27688711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 5378627 - 5378696
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||||||||||| |||||||||||    |  ||||| ||||||||||||||| ||||||||||||||||||    
T  5378627 gagaaatgatatttgtacaaccatttt---tatacaactttttgacaactttctctctcatactcacattata 5378696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 10619734 - 10619696
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10619734 ttttgacaactttctctctcatactcacattatattctt 10619696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 20406541 - 20406606
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    |||||||||||||| ||||||||| | |    |||||| ||||||||||||||||||||||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgt---gacaactttttgacaactttctttctcatactcacat 20406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 36186911 - 36186873
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36186911 ttttgacaactttctctctcatactcacattatattctt 36186873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 1789994 - 1790065
Alignment:
Q  199 aaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||| |||| |   ||||||| ||||||||||||||| |||||||||||||| || |||||    
T  1789994 aaatgatatttgtacaactattttg---cgacaactttttgacaactttctctctcatactcacatgatgttctt 1790065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 5724068 - 5724112
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||    
T  5724068 acaactttttaacaactttctctctcatactcacattatattctt 5724112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 9055297 - 9055341
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||    
T  9055297 acaactttttgacaactttctctctcatactcacattacattctt 9055341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 21037275 - 21037231
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  21037275 acaactttttgacaactttctctcttatactcacattatattctt 21037231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 26153644 - 26153719
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||| |||||| ||||   || |||||| ||||||||| ||||| |||||||||||||||||||||||    
T  26153644 atgagaaatgatatttgtacaactatttt--at-gacaac-ttttgacaattttctctctcatactcacattatattctt 26153719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 40842434 - 40842473
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  40842434 gacaatcttttgacaactttctctctcatactcacattat 40842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 47644741 - 47644776
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47644741 ttttgacaactttctctctcatactcacattatatt 47644776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 2790213 - 2790251
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  2790213 ttttgacaactttctctctcatactcacattatactctt 2790251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 17500733 - 17500771
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  17500733 ttttgacaactttatctctcatactcacattatattctt 17500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 17552481 - 17552443
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  17552481 ttttgacaactttatctctcatactcacattatattctt 17552443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 34349097 - 34349028
Alignment:
Q  197 agaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatat 269  Q
    ||||||||||||| |||||||||||  |    ||||| ||||||||| ||||| |||||||||||||||||||    
T  34349097 agaaatgatatttgtacaaccatttttgt---acaactttttgacaattttctctctcatactcacattatat 34349028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 41254812 - 41254850
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  41254812 ttttgacaactttctctctcatactcacattatactctt 41254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 43079663 - 43079629
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  43079663 gacaactttctctctcatactcacattatattctt 43079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 279
Target Start/End: Complemental strand, 45154610 - 45154531
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||||||||||| |||||| ||||    | |||||| ||| || |||||||| | ||||||||||||||||||||| |||||    
T  45154610 gagaaatgatatttgtacaactattt----ttgacaacttttagataactttctctttcatactcacattatattcttaatctc 45154531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 4678092 - 4678137
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||| ||||| |||||||||||||||||||||||    
T  4678092 gacaacttttagacaattttctctctcatactcacattatattctt 4678137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 7295492 - 7295525
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  7295492 acaactttctctctcatactcacattatattctt 7295525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 18926027 - 18925994
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||| |||||||||||||||||||||||    
T  18926027 acaactttctctctcatactcacattatattctt 18925994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 24267689 - 24267648
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatat 269  Q
    |||||| ||| ||||||||||| |||||||||||||||||||    
T  24267689 gacaacttttagacaactttctctctcatactcacattatat 24267648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 24380751 - 24380718
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||| |||||    
T  24380751 acaactttctttctcatactcacattatcttctt 24380718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 26123396 - 26123441
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  26123396 gacaacttttagacaactttctctctcatattcacattatattctt 26123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 267
Target Start/End: Complemental strand, 41189575 - 41189546
Alignment:
Q  238 tgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||||||||||||||||    
T  41189575 tgacaactttctttctcatactcacattat 41189546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 44187732 - 44187765
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||| |||||||||||||||||||||||||    
T  44187732 acaactttatttctcatactcacattatattctt 44187765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 2756970 - 2756926
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||| | |||||||||||||||| ||||||    
T  2756970 acaactttttgacaactttatctctcatactcacattacattctt 2756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 6269406 - 6269438
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  6269406 tgacaactttctctctcatactcacattatatt 6269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 21153086 - 21153118
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||||| ||||||||||||||||    
T  21153086 ttttgacaactttcttcctcatactcacattat 21153118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 27070705 - 27070669
Alignment:
Q  234 cttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||| |||| |||||||||||||||    
T  27070705 cttttgacaactttctctctcgtactcacattatatt 27070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 27207608 - 27207644
Alignment:
Q  234 cttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||| |||| |||||||||||||||    
T  27207608 cttttgacaactttctctctcgtactcacattatatt 27207644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 28824532 - 28824572
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||| ||||||||||||||| ||||||| ||||||||||    
T  28824532 gacaactttttgacaactttctctctcatattcacattata 28824572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 29855266 - 29855298
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  29855266 tgacaactttctctctcatactcacattatatt 29855298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 31445357 - 31445389
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| ||||||||||||||||||    
T  31445357 tgacaactttctttttcatactcacattatatt 31445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 31711968 - 31711936
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||||||||||||||| |||||    
T  31711968 tgacaactttctttctcatactcacatcatatt 31711936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 41018703 - 41018735
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  41018703 tgacaactttctatctcatactcacattatatt 41018735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 42204768 - 42204728
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  42204768 gacaaccttttgacaattttctctctcatactcgcattata 42204728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 42584842 - 42584874
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  42584842 tgacaactttctctctcatactcacattatatt 42584874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 44496834 - 44496802
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  44496834 tgacaactttctctctcatactcacattatatt 44496802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 48866972 - 48866932
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||| ||||||||||||||| || |||||||||||||||    
T  48866972 gacaactttttgacaactttctctcacatactcacattata 48866932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 12044332 - 12044403
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||||||||| ||||    | |||||| ||| ||||||||||| ||||||||||||||||||||    
T  12044332 gagaaatgatatttatacaactatttt---ttgacaacttttagacaactttctctctcatactcacattatatt 12044403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 14094941 - 14094985
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  14094941 acaactttttgacaactttctctctcatactcacattatattctt 14094985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 21506339 - 21506410
Alignment:
Q  199 aaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||    | |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  21506339 aaatgatatttgtacaaccatttt---ttgacaactttttgacaactttctctctcatactcacattatcttctt 21506410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 25924937 - 25924870
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    |||||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| ||||||||||||||    
T  25924937 atgagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacat 25924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 11785355 - 11785429
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| |    |||||  ||||||||||||||| ||||||| |||||||||||||||    
T  11785355 gagaaatgatatttgtacaaccattttgt---gacaattttttgacaactttctatctcatattcacattatattctt 11785429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 18792474 - 18792423
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||| |||||    
T  18792474 gacaactttttaacaactttctctctcatactcacattatattcttaatctc 18792423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 19789147 - 19789073
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   ||  ||||| ||||||||||||||| |||||||||||||||||| ||||    
T  19789147 gagaaatgatatttgtacaaccatttt--att-acaactttttgacaactttctctctcatactcacattatagtctt 19789073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 23633358 - 23633320
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23633358 ttttgacaactttctctctcatactcacattatattctt 23633320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 29383586 - 29383631
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||    
T  29383586 gacaactttttgacaactttctctctcatactcacattatactctt 29383631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 32729889 - 32729963
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatc-gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||    || |||||| |||  |||||||||| |||||||||||||||||||||||    
T  32729889 gagaaatgatatttgtacaaccattt----tctgacaacttttatacaactttctctctcatactcacattatattctt 32729963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 28965911 - 28965840
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| ||||||||||| |     ||||| ||||||||||||||| |||||||||||||| |||||    
T  28965911 gagaaatgatatttgtacaaccattttgtt---acaactttttgacaactttctctctcatactcacatgatatt 28965840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 8778943 - 8778869
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||||||||| || |||||||||||||| |||||    
T  8778943 gagaaatgatatttgtacaaccatttttta---acaactttttgacaactttctctcacatactcacattatcttctt 8778869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 9189015 - 9188941
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||| ||||||||| | |||||||||||||||||||||||    
T  9189015 gagaaatgatatttgtacaaccatttttta---acaacttttagacaactttatctctcatactcacattatattctt 9188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 32644648 - 32644683
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32644648 ttttgacaactttctctctcatactcacattatatt 32644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 3821414 - 3821452
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  3821414 ttttgacaactttctctctcatacttacattatattctt 3821452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 7693351 - 7693389
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  7693351 ttttaacaactttctctctcatactcacattatattctt 7693389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 8395372 - 8395410
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  8395372 acaactttttgacaactttctctctcatactcacattat 8395410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 15722574 - 15722505
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||||||||||| ||||| ||||| |    |||||| |||||||||| |||| ||||||||||||||||||    
T  15722574 gagaaatgatatttgtacaatcattttgt---gacaactttttgacaaccttctctctcatactcacattata 15722505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 16368076 - 16368046
Alignment:
Q  240 acaactttctttctcatactcacattatatt 270  Q
    |||||||||||||||||||||||||||||||    
T  16368076 acaactttctttctcatactcacattatatt 16368046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 16743297 - 16743263
Alignment:
Q  239 gacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||| |||||||||||||||||||||||    
T  16743297 gacaactttctctctcatactcacattatattctt 16743263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 30253348 - 30253310
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  30253348 ttttaacaactttctctctcatactcacattatattctt 30253310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 31480876 - 31480831
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||||||||||||| | |||||||||||||||||| ||||    
T  31480876 gacaacattttgacaactttttctctcatactcacattatactctt 31480831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 32853186 - 32853141
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| || |||||||||||| |||||||||||||||||| ||||    
T  32853186 gacaactttgtgacaactttctctctcatactcacattatactctt 32853141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 3800594 - 3800638
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| ||||||||||| ||| |||||||    
T  3800594 acaactttttgacaactttctatctcatactcatattctattctt 3800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 13423008 - 13423040
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  13423008 tgacaactttctctctcatactcacattatatt 13423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 20712096 - 20712140
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| |||||||| ||||||||||||||    
T  20712096 acaacttttagacaactttctctctcatacgcacattatattctt 20712140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 10096783 - 10096739
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  10096783 acaactttttgacaattttctttctcatactcacattatattctt 10096739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 17363260 - 17363304
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  17363260 acaactttttgacaactttctctctcatactcacattatattctt 17363304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 51224910 - 51224844
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    ||||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| ||||||||||||||    
T  51224910 tgagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacat 51224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 29513767 - 29513702
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    |||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| ||||||||||||||    
T  29513767 gagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacat 29513702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 39881104 - 39881027
Alignment:
Q  193 aatgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||| ||||| |||||   |   ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  39881104 aatgagaaatgatatttgtacaatcattttcta---acaactttttgacaactttctctctcatactcacattatcttctt 39881027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 44165908 - 44165977
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||| || |   ||||||  ||||||||||||||| |||||||||||||||||    
T  44165908 tgagaaatgatatttgtacaaccactttg---cgacaattttttgacaactttctctctcatactcacattat 44165977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 56025256 - 56025321
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacat 264  Q
    |||||||||||||| ||||||||||| |   | ||||| ||||||||||||||| ||||||||||||||    
T  56025256 gagaaatgatatttgtacaaccattttg---ctacaactttttgacaactttctctctcatactcacat 56025321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 18874964 - 18874919
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  18874964 gacaacttttagacaactttctctctcatactcacattatattctt 18874919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 41170776 - 41170843
Alignment:
Q  199 aaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||||||||| ||||||||||| ||    ||||| ||||||||||||||| ||||||||||||||||||||    
T  41170776 aaatgatatttgtacaaccattttggt---acaac-ttttgacaactttctctctcatactcacattatatt 41170843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 42882503 - 42882540
Alignment:
Q  236 tttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42882503 tttgacaactttttttctcatactcacattatattctt 42882540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 45274295 - 45274336
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatatt 270  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  45274295 acaactttttgacaactttctctctcatactcacattatatt 45274336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 46566958 - 46567003
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  46566958 gacaacttttagacaactttctctctcatactcacattatattctt 46567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 46794543 - 46794498
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||    
T  46794543 gacaactttttgacaactttctctctcatactcacattatactctt 46794498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 1688469 - 1688425
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||    
T  1688469 acaacttttttacaactttctctctcatactcacattatattctt 1688425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 4514300 - 4514264
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattc 271  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4514300 ttttgacaactttctctctcatactcacattatattc 4514264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 22920312 - 22920268
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||    
T  22920312 acaactttttgacatctttctctctcatactcacattatattctt 22920268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 22971487 - 22971531
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||    
T  22971487 acaactttttgacatctttctctctcatactcacattatattctt 22971531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 36081829 - 36081873
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||    
T  36081829 acaacttttggacaactttctctctcatactcacattatattctt 36081873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 47540171 - 47540215
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||    
T  47540171 ttttgataactttctctctcatactcacattatattcttaatctc 47540215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 55595979 - 55596023
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||    
T  55595979 acaactttttgacaactttctctctcatactcacattacattctt 55596023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 1562607 - 1562533
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||||||   |   ||||| ||||||||||||||| ||||||||||| ||||| |||||    
T  1562607 gagaaatgatatttgtacaaccattttcta---acaactttttgacaactttctctctcatactcatattattttctt 1562533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 4511853 - 4511888
Alignment:
Q  238 tgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||| |||||||||||||||||||||||    
T  4511853 tgacaactttctctctcatactcacattatattctt 4511888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 24772670 - 24772745
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||| ||||||   || |||||| |||||||||| |||| |||||||||||||||||| ||||    
T  24772670 tgagaaatgatatttgtacatccatttt--at-gacaactttttgacaaccttctctctcatactcacattatactctt 24772745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 31275175 - 31275214
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  31275175 gacaactttttgacaactttctctctcatactcacattat 31275214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 34116611 - 34116537
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  34116611 gagaaatgatatttgtacaaccactttgt---gacaactttttgacaattttctctctcatactcacattatactctt 34116537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 44272881 - 44272807
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||| ||||    | |||||| |||  |||||||||| |||||||||||||||||||||||    
T  44272881 gagaaatgatatttgtacaactatttt---ttgacaacttttaaacaactttctctctcatactcacattatattctt 44272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 49424891 - 49424817
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||| ||| | |   ||||| ||||||||||||||| ||||||||||||| ||| |||||    
T  49424891 gagaaatgatatttgtacaacctttttgta---acaactttttgacaactttctctctcatactcacaatattttctt 49424817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 51717353 - 51717279
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||| | |||| |||||||||||||||||| |||||||||||||    
T  51717353 gagaaatgatatttgtacaaccaatttgt---gacaacttcttgataactttctttctcatacttacattatattctt 51717279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 4896571 - 4896502
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattata 268  Q
    |||||||||||||| |||||||| || |    |||||| ||||||||||||||| || |||||||||||||||    
T  4896571 gagaaatgatatttgtacaaccactttgt---gacaactttttgacaactttctctcgcatactcacattata 4896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 9472548 - 9472510
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  9472548 ttttgacaactttctctctcatactcacattatcttctt 9472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 12241088 - 12241126
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  12241088 acaactttttgacaactttctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 25523239 - 25523201
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  25523239 acaactttttgacaactttctctctcatactcacattat 25523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 33820377 - 33820339
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  33820377 acaactttttgacaactttctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 35332742 - 35332780
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  35332742 ttttgataactttctctctcatactcacattatattctt 35332780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 35580162 - 35580200
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  35580162 ttttgacaattttctttctcatacccacattatattctt 35580200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 40308477 - 40308515
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  40308477 ttttgacaactttctctttcatactcacattatattctt 40308515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 46911928 - 46911966
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  46911928 acaactttttgacaactttctctctcatactcacattat 46911966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 46912834 - 46912796
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  46912834 ttttaacaactttctctctcatactcacattatattctt 46912796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 50890144 - 50890073
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||||| |||||| ||||    | |||||| ||| |||||||||||| ||||||||||||||||||||    
T  50890144 gagaaatgatatttgtacaactattt----ttgacaacttttgtgacaactttctctctcatactcacattatatt 50890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 53583169 - 53583131
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattat 267  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  53583169 acaactttttgacaactttctctctcatactcacattat 53583131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 29577466 - 29577433
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||||||||||||||| |||||    
T  29577466 acaactttctttctcatactcacattatcttctt 29577433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 48722069 - 48722137
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| |||| |||||| | |   ||||| ||||||||| ||||| |||||||||||||||||    
T  48722069 gagaaatgatatttgtacatccattttgca---acaactttttgacaattttctctctcatactcacattat 48722137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 49768940 - 49768872
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||||||||||| |||| |||||| | |   ||||  ||||||||||||||| |||||||||||||||||    
T  49768940 gagaaatgatatttgtacatccattttgca---acaattttttgacaactttctctctcatactcacattat 49768872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 51296231 - 51296186
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||||||||||||||| || ||||||||||||||| ||||    
T  51296231 gacaactttttgacaactttctctcacatactcacattatactctt 51296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 55927013 - 55927058
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||    
T  55927013 gacaactttttgacaaccttctctctcatactcacattatactctt 55927058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 5386409 - 5386441
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  5386409 ttttgacaactttctctctcatactcacattat 5386441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 17475359 - 17475391
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  17475359 ttttgacaactttctctctcatactcacattat 17475391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 29525888 - 29525932
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||    
T  29525888 acaactttttgataactttctctctcatactcagattatattctt 29525932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 29891881 - 29891913
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  29891881 ttttgacaactttctctctcatactcacattat 29891913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 31048919 - 31048959
Alignment:
Q  230 caaccttttgacaactttctttctcatactcacattatatt 270  Q
    |||| ||||||||||||||| |||||||||||||| |||||    
T  31048919 caactttttgacaactttctctctcatactcacatgatatt 31048959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 36512872 - 36512916
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||    
T  36512872 acaactttttgacaaccttctctctcatactcacattatactctt 36512916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 36812444 - 36812400
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||    
T  36812444 acaacttttggacaactttctctctcatactcacattacattctt 36812400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 38382147 - 38382195
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattcttcatctcactc 283  Q
    |||||||||| |||| |||||||||||| ||||||||||  ||||||||    
T  38382147 ttttgacaaccttctctctcatactcacgttatattcttattctcactc 38382195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 38792921 - 38792889
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  38792921 tgacaactttctctctcatactcacattatatt 38792889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 38952725 - 38952757
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  38952725 ttttgacaactttctctctcatactcacattat 38952757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 39606003 - 39606035
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  39606003 ttttgacaactttctctctcatactcacattat 39606035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 40409201 - 40409169
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  40409201 ttttgacaactttctctctcatactcacattat 40409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 42490945 - 42490977
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  42490945 ttttgacaactttctctctcatactcacattat 42490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 44257761 - 44257729
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  44257761 tgacaactttctctctcatactcacattatatt 44257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 51397912 - 51397868
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||||||||||||||| || |||| |||||||||||||||    
T  51397912 acaactttttgacaactttctatcccatattcacattatattctt 51397868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 53357112 - 53357080
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  53357112 ttttgacaactttctctctcatactcacattat 53357080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 53763852 - 53763808
Alignment:
Q  229 acaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  53763852 acaacttttggacaactttctctctcatactcccattatattctt 53763808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 55601732 - 55601700
Alignment:
Q  238 tgacaactttctttctcatactcacattatatt 270  Q
    |||||||||||| ||||||||||||||||||||    
T  55601732 tgacaactttctctctcatactcacattatatt 55601700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 11667 - 11718
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattcttcatctc 279  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||| |||||    
T  11667 gacaactttttaacaactttctctctcatactcacattatattcttaatctc 11718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 155905 - 155980
Alignment:
Q  195 tgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||   ||  ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  155905 tgagaaatgatatttgtacaaccatttt--att-acaactttttgacaactttctctctcgtactcacattatattctt 155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 199302 - 199340
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  199302 ttttgacaactttctctctcatactcacattatattctt 199340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 6425 - 6501
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||||| |||| ||||||   || |||||| |||||||||| |||| |||||||||||||||||| ||||    
T  6425 atgagaaatgatatttgtacatccatttt--at-gacaactttttgacaacattctctctcatactcacattatactctt 6501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 440747 - 440792
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  440747 gacaacttttagacaactttctctctcatactcacattctattctt 440792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 16665 - 16591
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| | |   ||||| ||| || || ||||| |||||||||||||||||||||||    
T  16665 gagaaatgatatttgtacaaccattttgta---acaacttttagataattttctctctcatactcacattatattctt 16591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 56179 - 56253
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| ||||||||||| | |   ||||| ||| || || ||||| |||||||||||||||||||||||    
T  56179 gagaaatgatatttgtacaaccattttgta---acaacttttagataattttctctctcatactcacattatattctt 56253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 6846 - 6885
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattat 267  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  6846 gacaactttttgacaactttctctctcatactcacattat 6885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 219735 - 219661
Alignment:
Q  196 gagaaatgatatttatacaaccatttgggatcgacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||||||||||| |||||||| || |    |||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  219735 gagaaatgatatttgtacaaccactttgt---gacaactttttgacaactttctttcttatattcacattatactctt 219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 10770 - 10732
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  10770 ttttgacaactttttctctcatactcacattatattctt 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 31635 - 31597
Alignment:
Q  235 ttttgacaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  31635 ttttgacaactttctctctcatactcacattatactctt 31597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 273
Target Start/End: Original strand, 16436 - 16465
Alignment:
Q  244 ctttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||||||||||    
T  16436 ctttctttctcatactcacattatattctt 16465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 15218 - 15185
Alignment:
Q  240 acaactttctttctcatactcacattatattctt 273  Q
    ||||||||||||||||||||||||||||| ||||    
T  15218 acaactttctttctcatactcacattatactctt 15185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 34437 - 34482
Alignment:
Q  228 gacaaccttttgacaactttctttctcatactcacattatattctt 273  Q
    |||||| || |||||||||||| |||||||||||||||||| ||||    
T  34437 gacaactttgtgacaactttctctctcatactcacattatactctt 34482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 10962 - 11033
Alignment:
Q  194 atgagaaatgatatttatacaaccatttgggatcgacaaccttt-tgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||||  ||| |||||| ||   |||||| ||| |||||||||||| |||||||||||||||||    
T  10962 atgagaaatgatatttgaacatccattttgg---gacaacttttgtgacaactttctctctcatactcacattat 11033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 27375 - 27407
Alignment:
Q  235 ttttgacaactttctttctcatactcacattat 267  Q
    ||||||||||||||| |||||||||||||||||    
T  27375 ttttgacaactttctctctcatactcacattat 27407  T

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