View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15733_high_16 (Length: 230)
Name: NF15733_high_16
Description: NF15733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15733_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 923300 - 923472
Alignment:
| Q |
50 |
cttataaagttgtgaagtatctcaaagggtcacctagaagaggttttttattttgaagggatttcacatccctaacttattggattattgcatatattga |
149 |
Q |
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| T |
923300 |
cttatagagttgtgaagtatctcaaagggtcacctaaaagaggttttttattttgaagggatttcacatccctaacttattggattattgcatatattga |
923399 |
T |
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| Q |
150 |
tggggcatgttgaattgattcttgaatgtcaacctcaagatattgtttctttcttgaattctccttcatctct |
222 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
923400 |
tggggcatgttgcattgattcttgaatgtcaacctcaagatattgtttctttcttgaattctccttgatctct |
923472 |
T |
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