View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15733_low_14 (Length: 297)
Name: NF15733_low_14
Description: NF15733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15733_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 285
Target Start/End: Original strand, 28939264 - 28939531
Alignment:
| Q |
18 |
gtattcaatcatatctcactatgatcaattagatgtgtgcaacactttttacacttcatcgcatagtgattaaacctggataaaaaattgatggaaataa |
117 |
Q |
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| T |
28939264 |
gtattcaatcatatctcactatgatcgattagatgtgtgcaacactttttacacttcgtcgcatagtgattaaacctggataaaaaattgatggaaataa |
28939363 |
T |
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| Q |
118 |
acaatgtggttgtgaattcttacccgacaacccaaaatgagtatccatcaatgtgccaactttgaacgatactttcatggttctgaaacacgatctcaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28939364 |
acaatgtggttgtgaattcttacccgacaacccaaaatgagtatccatcgatgtgccaactttgaacgatactttcatggttctgaaacacgatctcaac |
28939463 |
T |
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| Q |
218 |
gaaggcacggaaatcagcacccatgactgaagtatcagtgtacattgatctaccagaaggggtatctg |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28939464 |
gaaggcacggaaatcagcacccatgactgaagtatcagtgtacattgatctaccagaaggggtatctg |
28939531 |
T |
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