View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15733_low_3 (Length: 458)

Name: NF15733_low_3
Description: NF15733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15733_low_3
NF15733_low_3
[»] chr7 (10 HSPs)
chr7 (60-356)||(22727075-22727372)
chr7 (170-206)||(8182153-8182189)
chr7 (170-206)||(8932954-8932990)
chr7 (170-206)||(11693837-11693873)
chr7 (170-205)||(9802280-9802315)
chr7 (172-207)||(48063738-48063773)
chr7 (170-207)||(3779548-3779585)
chr7 (170-206)||(13027877-13027914)
chr7 (170-206)||(4412894-4412930)
chr7 (170-206)||(9761886-9761922)
[»] chr1 (13 HSPs)
chr1 (170-217)||(23053566-23053613)
chr1 (170-207)||(12283589-12283626)
chr1 (170-207)||(16233966-16234003)
chr1 (166-206)||(22637458-22637498)
chr1 (170-209)||(23861288-23861328)
chr1 (170-206)||(25449433-25449469)
chr1 (170-208)||(12625393-12625432)
chr1 (170-207)||(14388967-14389005)
chr1 (170-204)||(25398671-25398705)
chr1 (170-206)||(9345974-9346011)
chr1 (170-206)||(27857981-27858018)
chr1 (170-206)||(22202728-22202764)
chr1 (174-206)||(42283840-42283872)
[»] chr3 (16 HSPs)
chr3 (170-206)||(11067442-11067478)
chr3 (170-207)||(14006878-14006915)
chr3 (170-206)||(11073624-11073660)
chr3 (170-206)||(15902393-15902429)
chr3 (170-206)||(16881444-16881480)
chr3 (170-206)||(6089925-6089962)
chr3 (170-206)||(12727159-12727196)
chr3 (170-206)||(12964009-12964046)
chr3 (170-206)||(23539148-23539185)
chr3 (164-205)||(47406325-47406366)
chr3 (170-207)||(52919621-52919658)
chr3 (170-206)||(7833639-7833675)
chr3 (170-206)||(7833722-7833758)
chr3 (170-206)||(11189191-11189227)
chr3 (170-205)||(16031701-16031737)
chr3 (170-211)||(22804942-22804985)
[»] chr5 (12 HSPs)
chr5 (164-207)||(30742134-30742177)
chr5 (170-206)||(90339-90375)
chr5 (170-206)||(26120724-26120760)
chr5 (171-206)||(19570513-19570548)
chr5 (170-206)||(2157174-2157211)
chr5 (179-208)||(6513346-6513375)
chr5 (170-206)||(17446005-17446042)
chr5 (170-210)||(21702429-21702470)
chr5 (170-207)||(28465251-28465288)
chr5 (170-207)||(9088173-9088212)
chr5 (170-207)||(35544015-35544054)
chr5 (170-206)||(39799717-39799753)
[»] scaffold0525 (1 HSPs)
scaffold0525 (170-206)||(7054-7090)
[»] scaffold0009 (1 HSPs)
scaffold0009 (170-206)||(83494-83530)
[»] scaffold0004 (1 HSPs)
scaffold0004 (170-206)||(210603-210639)
[»] chr8 (4 HSPs)
chr8 (170-206)||(9767976-9768012)
chr8 (170-206)||(22672968-22673004)
chr8 (170-206)||(27739070-27739106)
chr8 (172-204)||(30213559-30213591)
[»] chr6 (7 HSPs)
chr6 (170-206)||(22801339-22801375)
chr6 (170-210)||(19833905-19833946)
chr6 (167-213)||(22292239-22292287)
chr6 (170-206)||(31930802-31930839)
chr6 (170-206)||(32543458-32543495)
chr6 (167-207)||(15986557-15986597)
chr6 (170-206)||(33353163-33353199)
[»] chr4 (8 HSPs)
chr4 (170-206)||(14116000-14116036)
chr4 (170-206)||(22089478-22089514)
chr4 (170-207)||(21546542-21546580)
chr4 (170-207)||(13929829-13929866)
chr4 (179-207)||(11900292-11900320)
chr4 (170-206)||(22676439-22676475)
chr4 (170-206)||(44397403-44397439)
chr4 (179-207)||(55650745-55650773)
[»] chr2 (6 HSPs)
chr2 (172-207)||(22316796-22316831)
chr2 (170-204)||(31968643-31968677)
chr2 (170-207)||(41122546-41122584)
chr2 (170-206)||(24851540-24851577)
chr2 (170-206)||(40780504-40780541)
chr2 (170-206)||(7687310-7687346)
[»] scaffold0035 (1 HSPs)
scaffold0035 (170-212)||(28970-29012)
[»] scaffold0011 (1 HSPs)
scaffold0011 (170-207)||(250844-250882)
[»] scaffold0275 (1 HSPs)
scaffold0275 (170-206)||(23824-23861)
[»] scaffold0068 (1 HSPs)
scaffold0068 (170-210)||(11440-11481)
[»] scaffold0655 (1 HSPs)
scaffold0655 (182-210)||(4262-4290)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 60 - 356
Target Start/End: Complemental strand, 22727372 - 22727075
Alignment:
Q  60 cattgtatagctctgtttcaatttctaataagaactctacttctgatcaaacactgaacaatttttataaacacttaaaaatagnnnnnnnnn-cttnnn 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||       
T  22727372 cattgtatagctctgtttcaatttctaataagaactctacttctgatcaaacactcaacaatttttataaacacttaaaaatagttttttttttcttaaa 22727273  T
Q  159 nnnnngtcaatacaattcaacctccttcttgtgtttttctcaccttcatgatcttgtacaatggctgaaaacaaaatgcgctctagcgatagttgcactt 258  Q
         ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22727272 aaaaagtcaatacaattcaacccccttcttatgtttttctcaccttcatgatcttgtacaatggctgaaaacaaaatgagctctagcgatagttgcactt 22727173  T
Q  259 ttcaaaacaagacataatttttcaaagaaaaatgtgattacttgatttgattaatgatgatttttggtaatgatatgttgaattgaattggtttatgg 356  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22727172 ttcaaaacaagacataatttttcaaagaaaaatgcgattacttgatttgattaatggtgatttttggtaatgatatgttgaattgaattggtttatgg 22727075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 8182189 - 8182153
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8182189 acaattcaacccccttcttgtgtttttctcaccttca 8182153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 8932990 - 8932954
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8932990 acaattcaacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 11693837 - 11693873
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11693837 acaattcaacctccttctcgtgtttttctcaccttca 11693873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 9802315 - 9802280
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9802315 acaattcaacccccttcttgtgtttttctcaccttc 9802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 48063738 - 48063773
Alignment:
Q  172 aattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||| ||||||||||||||||||||||||||    
T  48063738 aattcaacccccttcttgtgtttttctcaccttcat 48063773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 3779548 - 3779585
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  3779548 acaattcaacccccttcttatgtttttctcaccttcat 3779585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 13027877 - 13027914
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13027877 acaattcaacctcccttcttgtgtttttctcaccttca 13027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 4412894 - 4412930
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  4412894 acaattcaacccccttcttttgtttttctcaccttca 4412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 9761922 - 9761886
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||| | |||||||||||||||||||||||||    
T  9761922 acaattcaaaccccttcttgtgtttttctcaccttca 9761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23053613 - 23053566
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcatgatcttgtac 217  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23053613 acaattcaacccccttcttgtgtttttctcaccttcatgaccttgtac 23053566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 12283626 - 12283589
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12283626 acaattcaacatccttcttgtgtttttctcaccttcat 12283589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 16233966 - 16234003
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16233966 acaattcaacctccttcttatgtttttctcaccttcat 16234003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 22637498 - 22637458
Alignment:
Q  166 caatacaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  22637498 caatataattcaacccccttcttgtgtttttctcaccttca 22637458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 23861288 - 23861328
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttcatga 209  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  23861288 acaattcaacctccgttcttgtgtttttctcaccttcatga 23861328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 25449433 - 25449469
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25449433 acaattcaacccccttcttgtgtttttctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 12625393 - 12625432
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttcatg 208  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  12625393 acaattcaaccctccttcttgtgtttttctcaccttcatg 12625432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 14388967 - 14389005
Alignment:
Q  170 acaattcaac-ctccttcttgtgtttttctcaccttcat 207  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  14388967 acaattcaactctccttcttgtgtttttctcaccttcat 14389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 25398705 - 25398671
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcacctt 204  Q
    ||||||||||| |||||||||||||||||||||||    
T  25398705 acaattcaacccccttcttgtgtttttctcacctt 25398671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 9346011 - 9345974
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9346011 acaattcaaccctccttcttgtgtttttctcaccttca 9345974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 27858018 - 27857981
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  27858018 acaattcaaccctccttcttgtgtttttctcaccttca 27857981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 22202728 - 22202764
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  22202728 acaattcaaccccctccttgtgtttttctcaccttca 22202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 42283872 - 42283840
Alignment:
Q  174 ttcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||| |||||||||||||||||||||||||    
T  42283872 ttcaacccccttcttgtgtttttctcaccttca 42283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 11067478 - 11067442
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||||||||||||||||||||||||||||||||||    
T  11067478 acaattcaacctccttcttgtgtttttctcaccttca 11067442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 14006915 - 14006878
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14006915 acaattcaacccccttcttgtgtttttctcaccttcat 14006878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 11073660 - 11073624
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  11073660 acaattcaacccccttcttgtgtttttctcaccttca 11073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 15902429 - 15902393
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15902429 acaattcaacccccttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 16881480 - 16881444
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16881480 acaattcaacccccttcttgtgtttttctcaccttca 16881444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 6089962 - 6089925
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6089962 acaattcaacctcccttcttgtgtttttctcaccttca 6089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 12727159 - 12727196
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  12727159 acaattcaaccctccttcttgtgtttttctcaccttca 12727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 12964009 - 12964046
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  12964009 acaattcaaccctccttcttgtgtttttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 23539148 - 23539185
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23539148 acaattcaacctcccttcttgtgtttttctcaccttca 23539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 47406325 - 47406366
Alignment:
Q  164 gtcaatacaattcaacctccttcttgtgtttttctcaccttc 205  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  47406325 gtcaacacaattcaacccccttcttatgtttttctcaccttc 47406366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 52919658 - 52919621
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    |||||||| || ||||||||||||||||||||||||||    
T  52919658 acaattcagcccccttcttgtgtttttctcaccttcat 52919621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 7833639 - 7833675
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||| |||| |||||||||||||||||||||||||    
T  7833639 acaatttaacccccttcttgtgtttttctcaccttca 7833675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 7833722 - 7833758
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||| |||| |||||||||||||||||||||||||    
T  7833722 acaatttaacccccttcttgtgtttttctcaccttca 7833758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 11189227 - 11189191
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||  |||||||||||||||||||||||||    
T  11189227 acaattcaacacccttcttgtgtttttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 16031737 - 16031701
Alignment:
Q  170 acaattcaacctc-cttcttgtgtttttctcaccttc 205  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16031737 acaattcaacctctcttcttgtgtttttctcaccttc 16031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 22804942 - 22804985
Alignment:
Q  170 acaattcaacctcc--ttcttgtgtttttctcaccttcatgatc 211  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||    
T  22804942 acaattcaacctccccttcttgtgtttttctcaccttcaagatc 22804985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 30742177 - 30742134
Alignment:
Q  164 gtcaatacaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||    
T  30742177 gtcaacacaattcaacccccttcttgtgtttttctcaccttcat 30742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 90339 - 90375
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||||| |||||||||||||||||||||||    
T  90339 acaattcaacctcattcttgtgtttttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 26120724 - 26120760
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26120724 acaattcaacccccttcttgtgtttttctcaccttca 26120760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 19570513 - 19570548
Alignment:
Q  171 caattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||||||||||||||||| |||||||||||||||    
T  19570513 caattcaacctccttcttgtatttttctcaccttca 19570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 2157174 - 2157211
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2157174 acaattcaacctcccttcttgtgtttttctcaccttca 2157211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 6513346 - 6513375
Alignment:
Q  179 cctccttcttgtgtttttctcaccttcatg 208  Q
    ||||||||||||||||||||||||||||||    
T  6513346 cctccttcttgtgtttttctcaccttcatg 6513375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 17446042 - 17446005
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17446042 acaattcaacctcccttcttgtgtttttctcaccttca 17446005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 21702470 - 21702429
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttcatgat 210  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  21702470 acaattcaaccccccttcttgtgtttttctcaccttcatgat 21702429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 28465251 - 28465288
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  28465251 acaattcaacccccttcttgtgtttttcttaccttcat 28465288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 9088212 - 9088173
Alignment:
Q  170 acaattcaacc--tccttcttgtgtttttctcaccttcat 207  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  9088212 acaattcaacccttccttcttgtgtttttctcaccttcat 9088173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 35544015 - 35544054
Alignment:
Q  170 acaattcaacctcc--ttcttgtgtttttctcaccttcat 207  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  35544015 acaattcaacctccccttcttgtgtttttctcaccttcat 35544054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 39799717 - 39799753
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||  |||||||||||||||||||||||||    
T  39799717 acaattcaactcccttcttgtgtttttctcaccttca 39799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 7090 - 7054
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7090 acaattcaacccccttcttgtgtttttctcaccttca 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 83530 - 83494
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||||| |||||||||||||||||||||||    
T  83530 acaattcaacctcattcttgtgtttttctcaccttca 83494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 210639 - 210603
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  210639 acaattcaacccccttcttgtgtttttctcaccttca 210603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 9767976 - 9768012
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9767976 acaattcaacccccttcttgtgtttttctcaccttca 9768012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 22673004 - 22672968
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22673004 acaattcaacccccttcttgtgtttttctcaccttca 22672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 27739106 - 27739070
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  27739106 acaattcaacccccttcttgtatttttctcaccttca 27739070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 30213591 - 30213559
Alignment:
Q  172 aattcaacctccttcttgtgtttttctcacctt 204  Q
    ||||||||||| |||||||||||||||||||||    
T  30213591 aattcaacctcattcttgtgtttttctcacctt 30213559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 22801375 - 22801339
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22801375 acaattcaacccccttcttgtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 19833905 - 19833946
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttcatgat 210  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  19833905 acaattcaaccccccttcttgtgtttttctcaccttcatgat 19833946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 22292287 - 22292239
Alignment:
Q  167 aatacaattcaacctcc--ttcttgtgtttttctcaccttcatgatctt 213  Q
    |||||||||||||| ||  ||||||||||||||||||||||||| ||||    
T  22292287 aatacaattcaacccccccttcttgtgtttttctcaccttcatgttctt 22292239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 31930839 - 31930802
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttca 206  Q
    |||||||||||||| |||||||||||||||||||||||    
T  31930839 acaattcaacctcccttcttgtgtttttctcaccttca 31930802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 32543495 - 32543458
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  32543495 acaattcaaccctccttcttgtgtttttctcaccttca 32543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 15986597 - 15986557
Alignment:
Q  167 aatacaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    |||||||||| ||| |||||||||||||||||||| |||||    
T  15986597 aatacaattcgacccccttcttgtgtttttctcacattcat 15986557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 33353163 - 33353199
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  33353163 acaattcaacccccttcctgtgtttttctcaccttca 33353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 14116036 - 14116000
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14116036 acaattcaacccccttcttgtgtttttctcaccttca 14116000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 22089514 - 22089478
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22089514 acaattcaacccccttcttgtgtttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 21546542 - 21546580
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttcat 207  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21546542 acaattcaacctcccttcttgtgtttttctcaccttcat 21546580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 13929829 - 13929866
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  13929829 acaattcaacccccttcttgtgtttttctcactttcat 13929866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 11900320 - 11900292
Alignment:
Q  179 cctccttcttgtgtttttctcaccttcat 207  Q
    |||||||||||||||||||||||||||||    
T  11900320 cctccttcttgtgtttttctcaccttcat 11900292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 22676439 - 22676475
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    |||||||| || |||||||||||||||||||||||||    
T  22676439 acaattcaccccccttcttgtgtttttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 44397439 - 44397403
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  44397439 acaattcaacccccttcttatgtttttctcaccttca 44397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 55650773 - 55650745
Alignment:
Q  179 cctccttcttgtgtttttctcaccttcat 207  Q
    |||||||||||||||||||||||||||||    
T  55650773 cctccttcttgtgtttttctcaccttcat 55650745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 22316831 - 22316796
Alignment:
Q  172 aattcaacctccttcttgtgtttttctcaccttcat 207  Q
    ||||||||| ||||||||||||||||||||||||||    
T  22316831 aattcaacccccttcttgtgtttttctcaccttcat 22316796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 31968643 - 31968677
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcacctt 204  Q
    ||||||||||| |||||||||||||||||||||||    
T  31968643 acaattcaacccccttcttgtgtttttctcacctt 31968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 41122546 - 41122584
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttcat 207  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  41122546 acaattcaaccctccttcttgtgtttttctcaccttcat 41122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 24851540 - 24851577
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  24851540 acaattcaaccctccttcttgtgtttttctcaccttca 24851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 40780541 - 40780504
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40780541 acaattcaaccctccttcttgtgtttttctcaccttca 40780504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 7687310 - 7687346
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7687310 acaattcaacccccttcttgtatttttctcaccttca 7687346  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 29012 - 28970
Alignment:
Q  170 acaattcaacctccttcttgtgtttttctcaccttcatgatct 212  Q
    |||||| |||| |||||||||||||||||||||||||| ||||    
T  29012 acaatttaacccccttcttgtgtttttctcaccttcataatct 28970  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 250882 - 250844
Alignment:
Q  170 acaattcaacctc-cttcttgtgtttttctcaccttcat 207  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  250882 acaattcaacctctcttcttgtgtttttctcaccttcat 250844  T

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Target: scaffold0275 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 23861 - 23824
Alignment:
Q  170 acaattcaacc-tccttcttgtgtttttctcaccttca 206  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  23861 acaattcaaccctccttcttgtgtttttctcaccttca 23824  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 11440 - 11481
Alignment:
Q  170 acaattcaacctcc-ttcttgtgtttttctcaccttcatgat 210  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  11440 acaattcaaccccccttcttgtgtttttctcaccttcatgat 11481  T

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Target: scaffold0655 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 4290 - 4262
Alignment:
Q  182 ccttcttgtgtttttctcaccttcatgat 210  Q
    |||||||||||||||||||||||||||||    
T  4290 ccttcttgtgtttttctcaccttcatgat 4262  T

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