View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15734_low_15 (Length: 261)
Name: NF15734_low_15
Description: NF15734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15734_low_15 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 51822331 - 51822578
Alignment:
| Q |
14 |
ttctgaagaagaagaagtgcgtacatttttcctttgttgcacatgtttggtggaattgaacccgttaagaaattctccgaaacgtcgatgtattcaaatt |
113 |
Q |
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| T |
51822331 |
ttctgaagaagaagaagtgcgtacatttttcctttgttgcacatgtttggtggaattgaacccgttaagaaattctccgaaacgtcgatgtattcaaatt |
51822430 |
T |
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| Q |
114 |
ctgaccatgatccagtcttctgaggaattggacctgttaatctgtttctgtaaagagacagttcccggaggtttttaaactcacctatctccggtggaat |
213 |
Q |
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| T |
51822431 |
ctgaccatgatccagtcttctgaggaattggacctgttaatctgtttctgtaaagagacagttcccggaggtttttaaactcacctatctccggtggaat |
51822530 |
T |
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| Q |
214 |
ctcgccggataatttgttttcgaagaaatgaagtgaaattagattact |
261 |
Q |
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| T |
51822531 |
ctcgccggataatttgttttcgaagaattgaagtgaaattagattact |
51822578 |
T |
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