View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15734_low_16 (Length: 253)
Name: NF15734_low_16
Description: NF15734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15734_low_16 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 8091260 - 8091497
Alignment:
| Q |
16 |
aatattaagaatgcccttccttcgcggctgcaaaatgatgatgtcatgaaagaggtaaatatcacttctcaccgtgttaactattagaaaaagttgaaat |
115 |
Q |
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| T |
8091260 |
aatattaagaatgcccttccttcgcggctgcaaaatgatgatgtcatgaaagaggtaaatatcacttctcaccgtgttaactattagaaaaagttgaaat |
8091359 |
T |
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| Q |
116 |
aacaaccgaacttaacagatagaacaaagcgaaatccatctctaattttatcgttaagtgttaaagatgctaaatttagcgaccaatttgatattttagt |
215 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8091360 |
aacaaccgaacttaacagatagaacaaagcgaaattcatctctaattttatcgctaagtgttaaagatgctaaatttagcgaccaatttgatattttagt |
8091459 |
T |
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| Q |
216 |
attacttggaatatgctaattggaaattttatgtagct |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
8091460 |
attacttggaatatgctaattggaaattttatgtagct |
8091497 |
T |
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