View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15734_low_4 (Length: 418)

Name: NF15734_low_4
Description: NF15734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15734_low_4
NF15734_low_4
[»] chr4 (52 HSPs)
chr4 (18-246)||(47997634-47997862)
chr4 (18-146)||(48813166-48813294)
chr4 (272-403)||(47997889-47998020)
chr4 (179-242)||(48812599-48812663)
chr4 (274-313)||(38374979-38375018)
chr4 (288-333)||(12439666-12439711)
chr4 (275-312)||(24063209-24063246)
chr4 (275-316)||(29908075-29908116)
chr4 (288-333)||(42756120-42756165)
chr4 (276-312)||(12712020-12712056)
chr4 (276-316)||(40901139-40901179)
chr4 (274-330)||(43374272-43374328)
chr4 (274-313)||(13121566-13121605)
chr4 (272-315)||(14542758-14542801)
chr4 (274-313)||(22040672-22040711)
chr4 (274-313)||(28435248-28435287)
chr4 (270-317)||(29808264-29808311)
chr4 (274-316)||(1657030-1657072)
chr4 (274-312)||(1737184-1737222)
chr4 (275-313)||(10148201-10148239)
chr4 (274-316)||(14577507-14577549)
chr4 (271-313)||(20799391-20799433)
chr4 (274-316)||(39093575-39093617)
chr4 (276-306)||(40160881-40160911)
chr4 (276-330)||(47015570-47015624)
chr4 (274-311)||(3299094-3299131)
chr4 (284-313)||(7061537-7061566)
chr4 (275-316)||(7230299-7230340)
chr4 (275-312)||(8013937-8013974)
chr4 (276-313)||(16584951-16584988)
chr4 (289-330)||(36203241-36203282)
chr4 (276-317)||(46434762-46434803)
chr4 (274-315)||(49308840-49308881)
chr4 (274-311)||(51436606-51436643)
chr4 (273-313)||(2649732-2649772)
chr4 (271-311)||(4916179-4916219)
chr4 (274-314)||(10261769-10261809)
chr4 (274-330)||(19479477-19479533)
chr4 (274-314)||(21562646-21562686)
chr4 (289-333)||(21623434-21623478)
chr4 (274-314)||(24079840-24079880)
chr4 (274-314)||(26926710-26926750)
chr4 (277-317)||(29910479-29910519)
chr4 (280-316)||(30380549-30380585)
chr4 (280-316)||(33900730-33900766)
chr4 (289-329)||(37921752-37921792)
chr4 (274-314)||(43330167-43330207)
chr4 (280-316)||(45029611-45029647)
chr4 (274-314)||(47806256-47806296)
chr4 (289-317)||(49952686-49952714)
chr4 (274-314)||(51450233-51450273)
chr4 (280-316)||(56497614-56497650)
[»] chr7 (36 HSPs)
chr7 (142-242)||(27858635-27858733)
chr7 (273-324)||(6384862-6384913)
chr7 (274-313)||(30857270-30857309)
chr7 (274-311)||(3671848-3671885)
chr7 (274-314)||(19036102-19036142)
chr7 (274-314)||(20718494-20718534)
chr7 (289-329)||(33473536-33473576)
chr7 (274-313)||(4905298-4905337)
chr7 (274-333)||(7872748-7872807)
chr7 (274-313)||(27263363-27263402)
chr7 (275-330)||(39926539-39926594)
chr7 (274-313)||(40200955-40200994)
chr7 (274-316)||(18714467-18714509)
chr7 (275-313)||(27270257-27270295)
chr7 (277-311)||(34807243-34807277)
chr7 (274-312)||(46849107-46849145)
chr7 (274-315)||(1720078-1720119)
chr7 (276-313)||(5041361-5041398)
chr7 (274-311)||(9522936-9522973)
chr7 (276-313)||(11908980-11909017)
chr7 (276-313)||(23413048-23413085)
chr7 (276-317)||(44651623-44651664)
chr7 (276-313)||(47342436-47342473)
chr7 (280-317)||(48527208-48527245)
chr7 (273-309)||(1077010-1077046)
chr7 (289-329)||(3533023-3533063)
chr7 (274-314)||(20763175-20763215)
chr7 (289-317)||(22777374-22777402)
chr7 (277-309)||(23374633-23374665)
chr7 (280-316)||(26946631-26946667)
chr7 (274-342)||(27279403-27279471)
chr7 (274-314)||(29488741-29488781)
chr7 (274-314)||(33232397-33232437)
chr7 (274-314)||(34284539-34284579)
chr7 (288-332)||(34568347-34568391)
chr7 (285-317)||(43998593-43998625)
[»] chr3 (45 HSPs)
chr3 (166-227)||(5934600-5934661)
chr3 (275-316)||(14741813-14741854)
chr3 (274-313)||(14030735-14030774)
chr3 (270-316)||(10594696-10594742)
chr3 (274-316)||(54230099-54230141)
chr3 (275-328)||(2753705-2753758)
chr3 (275-316)||(8127482-8127523)
chr3 (274-311)||(20612277-20612314)
chr3 (276-312)||(2078263-2078299)
chr3 (289-333)||(4216414-4216458)
chr3 (289-333)||(45096028-45096072)
chr3 (280-316)||(45254250-45254286)
chr3 (272-311)||(4668708-4668747)
chr3 (277-316)||(10926488-10926527)
chr3 (274-313)||(25441500-25441539)
chr3 (274-313)||(39779046-39779085)
chr3 (274-313)||(48234453-48234492)
chr3 (270-316)||(1149065-1149111)
chr3 (271-313)||(2153498-2153540)
chr3 (274-316)||(21914071-21914113)
chr3 (274-316)||(25505701-25505743)
chr3 (286-316)||(30200845-30200875)
chr3 (274-316)||(35191817-35191859)
chr3 (275-313)||(39083834-39083872)
chr3 (271-313)||(45431970-45432012)
chr3 (274-316)||(52119395-52119437)
chr3 (275-313)||(52172788-52172826)
chr3 (272-313)||(977939-977980)
chr3 (276-313)||(8238586-8238623)
chr3 (288-317)||(8957962-8957991)
chr3 (274-311)||(19880248-19880285)
chr3 (275-316)||(21245812-21245853)
chr3 (289-330)||(25917600-25917641)
chr3 (276-313)||(25955295-25955332)
chr3 (275-316)||(35863814-35863855)
chr3 (277-338)||(38221725-38221786)
chr3 (276-313)||(49975807-49975844)
chr3 (274-314)||(916460-916500)
chr3 (288-316)||(16980368-16980396)
chr3 (289-329)||(28266722-28266762)
chr3 (274-314)||(38630111-38630151)
chr3 (288-316)||(41258990-41259018)
chr3 (273-313)||(41817521-41817561)
chr3 (274-314)||(44075156-44075196)
chr3 (277-317)||(45334207-45334247)
[»] chr1 (37 HSPs)
chr1 (184-242)||(21874655-21874713)
chr1 (274-314)||(43356456-43356496)
chr1 (274-313)||(42045372-42045411)
chr1 (275-314)||(47417804-47417843)
chr1 (274-315)||(29987112-29987153)
chr1 (270-338)||(10132440-10132508)
chr1 (273-333)||(45190268-45190328)
chr1 (274-313)||(27533265-27533304)
chr1 (274-329)||(41974767-41974822)
chr1 (275-313)||(5279371-5279409)
chr1 (272-330)||(27449443-27449501)
chr1 (274-316)||(30548092-30548133)
chr1 (274-316)||(45677304-45677346)
chr1 (275-313)||(48100744-48100782)
chr1 (275-316)||(64679-64720)
chr1 (276-309)||(5270742-5270775)
chr1 (275-316)||(9639818-9639859)
chr1 (289-338)||(10843336-10843385)
chr1 (274-311)||(11681247-11681284)
chr1 (276-313)||(16033452-16033489)
chr1 (274-315)||(22335378-22335419)
chr1 (276-313)||(23334610-23334647)
chr1 (273-330)||(26329121-26329178)
chr1 (280-317)||(42416821-42416858)
chr1 (273-310)||(42440147-42440184)
chr1 (271-312)||(44678014-44678055)
chr1 (272-316)||(7610167-7610211)
chr1 (274-330)||(13401602-13401658)
chr1 (274-314)||(16307670-16307710)
chr1 (281-313)||(19020595-19020627)
chr1 (285-317)||(19533189-19533221)
chr1 (288-316)||(24124844-24124872)
chr1 (274-330)||(25532978-25533034)
chr1 (275-311)||(32950762-32950798)
chr1 (288-316)||(34808577-34808605)
chr1 (288-316)||(43843910-43843938)
chr1 (280-316)||(47719113-47719149)
[»] chr6 (31 HSPs)
chr6 (274-316)||(788885-788927)
chr6 (274-316)||(7082992-7083034)
chr6 (271-313)||(12735240-12735282)
chr6 (274-314)||(12582229-12582269)
chr6 (286-330)||(28046190-28046234)
chr6 (276-311)||(12904319-12904354)
chr6 (285-316)||(14679144-14679175)
chr6 (274-313)||(20744160-20744199)
chr6 (275-330)||(33824886-33824941)
chr6 (288-338)||(3487928-3487978)
chr6 (275-313)||(8629697-8629735)
chr6 (275-317)||(14169546-14169588)
chr6 (274-312)||(23629837-23629875)
chr6 (274-316)||(28898875-28898917)
chr6 (275-312)||(331887-331924)
chr6 (273-330)||(1535308-1535365)
chr6 (289-338)||(3808133-3808182)
chr6 (272-309)||(9977083-9977120)
chr6 (274-311)||(13496140-13496177)
chr6 (275-316)||(15155754-15155795)
chr6 (289-330)||(18256888-18256929)
chr6 (272-333)||(23507389-23507450)
chr6 (276-313)||(26356083-26356120)
chr6 (275-316)||(30374533-30374574)
chr6 (276-313)||(30579881-30579918)
chr6 (271-316)||(31971548-31971593)
chr6 (274-314)||(247680-247720)
chr6 (280-316)||(2306859-2306895)
chr6 (276-304)||(5954642-5954670)
chr6 (275-315)||(9333981-9334021)
chr6 (286-314)||(12735154-12735182)
[»] chr8 (32 HSPs)
chr8 (275-316)||(11603838-11603879)
chr8 (274-317)||(32944943-32944986)
chr8 (275-329)||(32115407-32115461)
chr8 (276-333)||(6038277-6038334)
chr8 (274-314)||(7869641-7869681)
chr8 (275-314)||(12674866-12674905)
chr8 (278-333)||(14258017-14258072)
chr8 (277-312)||(27571852-27571887)
chr8 (274-313)||(29376923-29376962)
chr8 (275-330)||(32223880-32223935)
chr8 (274-313)||(39821906-39821945)
chr8 (275-313)||(8717476-8717514)
chr8 (274-316)||(20275189-20275231)
chr8 (274-316)||(21061816-21061858)
chr8 (275-313)||(26991758-26991796)
chr8 (276-330)||(27718896-27718950)
chr8 (274-316)||(30623312-30623354)
chr8 (271-313)||(38763512-38763554)
chr8 (274-311)||(20469311-20469348)
chr8 (276-313)||(37141379-37141416)
chr8 (275-312)||(44794916-44794953)
chr8 (276-316)||(5179812-5179852)
chr8 (277-313)||(6447211-6447247)
chr8 (272-312)||(9014675-9014715)
chr8 (277-313)||(12714373-12714409)
chr8 (274-314)||(20665363-20665403)
chr8 (274-314)||(30550726-30550766)
chr8 (289-341)||(31888020-31888072)
chr8 (289-317)||(33763833-33763861)
chr8 (277-333)||(40468975-40469031)
chr8 (289-317)||(41752186-41752214)
chr8 (274-314)||(44215475-44215515)
[»] chr2 (49 HSPs)
chr2 (274-339)||(22354943-22355008)
chr2 (276-313)||(35194282-35194319)
chr2 (274-313)||(9547409-9547448)
chr2 (275-317)||(40967372-40967414)
chr2 (275-329)||(44488011-44488065)
chr2 (271-316)||(4897562-4897607)
chr2 (271-316)||(4944956-4945001)
chr2 (283-316)||(18231482-18231515)
chr2 (272-313)||(23407016-23407057)
chr2 (274-311)||(29896294-29896331)
chr2 (274-314)||(5028877-5028917)
chr2 (275-311)||(18611964-18612000)
chr2 (276-316)||(26400770-26400810)
chr2 (274-317)||(12413511-12413554)
chr2 (274-317)||(12425571-12425614)
chr2 (276-311)||(19159965-19160000)
chr2 (277-316)||(20120724-20120763)
chr2 (274-313)||(22267535-22267573)
chr2 (274-313)||(24592846-24592885)
chr2 (270-316)||(2264816-2264862)
chr2 (272-330)||(9537004-9537062)
chr2 (272-330)||(10195660-10195718)
chr2 (274-308)||(15447714-15447748)
chr2 (271-313)||(19212980-19213022)
chr2 (273-343)||(22520209-22520279)
chr2 (291-333)||(40799611-40799653)
chr2 (274-316)||(43117190-43117232)
chr2 (289-330)||(3113742-3113783)
chr2 (272-313)||(3904224-3904265)
chr2 (275-316)||(12124703-12124744)
chr2 (280-313)||(16877146-16877179)
chr2 (280-313)||(16989277-16989310)
chr2 (274-314)||(3708714-3708754)
chr2 (280-316)||(4056809-4056845)
chr2 (289-317)||(5980245-5980273)
chr2 (289-345)||(7302156-7302212)
chr2 (285-313)||(9383220-9383248)
chr2 (276-316)||(9391766-9391806)
chr2 (274-314)||(11868662-11868702)
chr2 (289-317)||(16204832-16204860)
chr2 (275-311)||(19967442-19967478)
chr2 (272-316)||(22359024-22359068)
chr2 (272-316)||(24593395-24593439)
chr2 (288-316)||(26133534-26133562)
chr2 (274-314)||(35360055-35360095)
chr2 (280-316)||(35727456-35727492)
chr2 (288-316)||(36922916-36922944)
chr2 (289-317)||(39761456-39761484)
chr2 (274-330)||(40546321-40546377)
[»] chr5 (21 HSPs)
chr5 (274-309)||(7713558-7713593)
chr5 (275-330)||(39610342-39610397)
chr5 (274-314)||(5015301-5015341)
chr5 (280-316)||(11647216-11647252)
chr5 (274-313)||(6489029-6489068)
chr5 (270-317)||(23118047-23118094)
chr5 (275-330)||(28344559-28344614)
chr5 (285-316)||(36321505-36321536)
chr5 (274-316)||(5846048-5846090)
chr5 (287-333)||(11844451-11844497)
chr5 (271-313)||(20688062-20688104)
chr5 (276-330)||(30488930-30488984)
chr5 (274-311)||(5551281-5551318)
chr5 (280-317)||(8544995-8545032)
chr5 (271-312)||(19248502-19248543)
chr5 (275-332)||(21657399-21657456)
chr5 (274-311)||(43135024-43135061)
chr5 (276-316)||(596493-596532)
chr5 (274-314)||(37462132-37462172)
chr5 (289-317)||(40446001-40446029)
chr5 (288-316)||(43108588-43108616)
[»] scaffold1149 (1 HSPs)
scaffold1149 (275-313)||(2354-2392)
[»] scaffold0350 (1 HSPs)
scaffold0350 (276-333)||(1250-1307)
[»] scaffold0320 (1 HSPs)
scaffold0320 (292-329)||(15473-15510)
[»] scaffold0262 (1 HSPs)
scaffold0262 (274-316)||(15930-15972)
[»] scaffold0044 (1 HSPs)
scaffold0044 (277-315)||(42337-42375)
[»] scaffold0005 (1 HSPs)
scaffold0005 (274-316)||(239826-239868)
[»] scaffold0066 (1 HSPs)
scaffold0066 (280-313)||(17526-17559)
[»] scaffold0016 (1 HSPs)
scaffold0016 (276-313)||(99059-99096)
[»] scaffold0011 (1 HSPs)
scaffold0011 (271-312)||(189969-190010)
[»] scaffold0012 (1 HSPs)
scaffold0012 (288-316)||(119968-119996)
[»] scaffold0006 (1 HSPs)
scaffold0006 (288-316)||(210092-210120)


Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 47997634 - 47997862
Alignment:
Q  18 atttcattctcatagtagtaagagactcttatatcattagtaccacgaatgtggagcatattgaccagaccattcatcaatacctcaacatcaaccagca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47997634 atttcattctcatagtagtaagagactcttatatcattagtaccacgaatgtggagcatattgaccagaccattcatcaatacctcaacatcaaccagca 47997733  T
Q  118 acaaggatgataacacagattaatttaatatagcaagataatagtgtaagagtaagactacaagaactcatcactttgcacaatgatactaagacaagat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47997734 acaaggatgataacacagattaatttaatatagcaagataatagtgtaagagtaagactacaagaactcatcactttgcacaatgatactaagacaagat 47997833  T
Q  218 tgacaaagaaatccatataacttataagg 246  Q
    |||||||||||||||||||||||||||||    
T  47997834 tgacaaagaaatccatataacttataagg 47997862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 48813294 - 48813166
Alignment:
Q  18 atttcattctcatagtagtaagagactcttatatcattagtaccacgaatgtggagcatattgaccagaccattcatcaatacctcaacatcaaccagca 117  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48813294 atttcattttcatagtagtaagagactcttatatcattagtaccacaaatgtggagcatattgaccagaccattcatcaatacctcaacatcaaccagca 48813195  T
Q  118 acaaggatgataacacagattaatttaat 146  Q
    |||||||||||||||||||||||||||||    
T  48813194 acaaggatgataacacagattaatttaat 48813166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 272 - 403
Target Start/End: Original strand, 47997889 - 47998020
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcgggaacattactttgttttcttgcaataccataatg 371  Q
    ||||||| |||| ||||||||| ||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  47997889 cagggttcgaaccccaaaccttacatatatcatacattgttcttattgactgagctaagttcgcgggaacattactttgttttcttgcaataccgtaatg 47997988  T
Q  372 ttcttatatttatacaattacgcttccctttg 403  Q
    ||||||||||||||||||||||||||||||||    
T  47997989 ttcttatatttatacaattacgcttccctttg 47998020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 48812663 - 48812599
Alignment:
Q  179 aagaactcatcactttgcacaatgatactaagacaaga-ttgacaaagaaatccatataacttat 242  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  48812663 aagaactcatcactttgcacaatgatactaagacaagatttgacaaagaaatccatataagttat 48812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 38375018 - 38374979
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  38375018 gggtttgaactccagaccttgcatatattatgcattgtcc 38374979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 12439711 - 12439666
Alignment:
Q  288 aaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||    
T  12439711 aaccttgcatatattatgcattgtccttatcaactgagctaagttc 12439666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 24063209 - 24063246
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24063209 ggtttgaactccaaatcttgcatatattatgcattgtc 24063246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 29908116 - 29908075
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  29908116 ggtttgaactccggaccttgcatatattatgcattgtcctta 29908075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 42756120 - 42756165
Alignment:
Q  288 aaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||    
T  42756120 aaccttgcatatattatgcattgtccttatcaactgagctaagttc 42756165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 12712020 - 12712056
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    |||||||||||||| ||||||||||||||||||||||    
T  12712020 gtttgaactccaaatcttgcatatattatgcattgtc 12712056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 40901139 - 40901179
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  40901139 gtttgaactcccgaccttgcatatattatgcattgtcctta 40901179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 43374272 - 43374328
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||  ||||| |||||    
T  43374272 gggtttgaactccgaaccttgcatattttatgcattgtccatatcaactgagctaag 43374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 13121605 - 13121566
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  13121605 gggtttgaacttcagaccttgcatatattatgcattgtcc 13121566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 14542758 - 14542801
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||    
T  14542758 cagggttcgaaccccagaccttgcatatattatgcattgtcctt 14542801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 22040711 - 22040672
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  22040711 gggtttgaaccccgaaccttgcatatattatgcattgtcc 22040672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 28435248 - 28435287
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  28435248 gggtttgaaccccgaaccttgcatatattatgcattgtcc 28435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 29808264 - 29808311
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||| |||| |||| ||| |||||||||||||||||||||||||||||    
T  29808264 tccaaggttcgaaccccataccttgcatatattatgcattgtccttat 29808311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 1657030 - 1657072
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||    
T  1657030 gggttcgaaccccaaaccttacatatattatgcattgtcctta 1657072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 1737222 - 1737184
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  1737222 gggtttgaactccgaaccttgcatattttatgcattgtc 1737184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 10148239 - 10148201
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  10148239 ggtttgaactctgaaccttgcatatattatgcattgtcc 10148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 14577507 - 14577549
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||  || |||||||||||||||||||||||||    
T  14577507 gggtttgaactccggactttgcatatattatgcattgtcctta 14577549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 20799391 - 20799433
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| ||  |||||||||||||||||||||||||    
T  20799391 ccagggtttgaaccccggaccttgcatatattatgcattgtcc 20799433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 39093575 - 39093617
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| | |||| |||||||||||||||||||||||||    
T  39093575 gggtttgaaccctaaactttgcatatattatgcattgtcctta 39093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 306
Target Start/End: Complemental strand, 40160911 - 40160881
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgc 306  Q
    |||||||||||||||||||||||||||||||    
T  40160911 gtttgaactccaaaccttgcatatattatgc 40160881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 47015570 - 47015624
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||| ||| |||||| |||||||||||||||||| || | |||||||||||    
T  47015570 gtttgaaccccagaccttgtatatattatgcattgtccatactaactgaactaag 47015624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 3299094 - 3299131
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  3299094 gggtttgaacctcaaaccttgcatatattatgcattgt 3299131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 313
Target Start/End: Original strand, 7061537 - 7061566
Alignment:
Q  284 tccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||||||||||||||||||||    
T  7061537 tccaaaccttgcatatattatgcattgtcc 7061566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 7230340 - 7230299
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| ||  ||||||||||||||||||||||||||||    
T  7230340 ggtttgaaccccggaccttgcatatattatgcattgtcctta 7230299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 8013974 - 8013937
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    |||||||||||||||| || ||||||||||||||||||    
T  8013974 ggtttgaactccaaactttacatatattatgcattgtc 8013937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 16584951 - 16584988
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  16584951 gtttgaactccgaaccttgcatattttatgcattgtcc 16584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 36203282 - 36203241
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||||||||||||||||||||  ||||| |||||    
T  36203282 accttgcatatattatgcattgtccttatcaactgagctaag 36203241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 46434762 - 46434803
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||  |||||||| |||||||||||||||||||||||    
T  46434762 gtttgaacctcaaaccttacatatattatgcattgtccttat 46434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 49308881 - 49308840
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    ||||| |||| ||| |||||||||||||||||||||||||||    
T  49308881 gggttcgaaccccagaccttgcatatattatgcattgtcctt 49308840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 51436606 - 51436643
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  51436606 gggttcgaactccgaaccttgcatatattatgcattgt 51436643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 313
Target Start/End: Original strand, 2649732 - 2649772
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||| |||||||  |||||||||||||||||||||||||    
T  2649732 agggttcgaactccggaccttgcatatattatgcattgtcc 2649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 4916219 - 4916179
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  4916219 ccagggtttgaaccccaaatcttacatatattatgcattgt 4916179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 10261769 - 10261809
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  10261769 gggtttgaactccggaccttgcatattttatgcattgtcct 10261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 19479477 - 19479533
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||| ||  ||||||||||||||||||||||| | |||| ||||| |||||    
T  19479477 gggtttgaaccccggaccttgcatatattatgcattgttcatattaactgagctaag 19479533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 21562686 - 21562646
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  21562686 gggtttgaactccggaccttgcatattttatgcattgtcct 21562646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 21623434 - 21623478
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||||||||||||||||||||| ||   ||||||||||||||    
T  21623434 accttgcatatattatgcattgtccctaccaactgaactaagttc 21623478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 24079840 - 24079880
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  24079840 gggtttgaactccggaccttgcatattttatgcattgtcct 24079880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 26926710 - 26926750
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  26926710 gggtttgaactccggaccttgcatattttatgcattgtcct 26926750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 29910519 - 29910479
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||||||| || | |||||||||||||||||||||||||||    
T  29910519 tttgaacttcagatcttgcatatattatgcattgtccttat 29910479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 30380585 - 30380549
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| |||||||||||||||||||| |||||||||||    
T  30380585 gaaccccaaaccttgcatatattatacattgtcctta 30380549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 33900730 - 33900766
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||| | ||||||||||||||||||||||||||    
T  33900730 gaactccagatcttgcatatattatgcattgtcctta 33900766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 37921792 - 37921752
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaa 329  Q
    |||||||||||||||||||||||||||| | ||||| ||||    
T  37921792 accttgcatatattatgcattgtccttactaactgagctaa 37921752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 43330207 - 43330167
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  43330207 gggtttgaactccggaccttgcatattttatgcattgtcct 43330167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 45029611 - 45029647
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  45029611 gaaccccaaaccttacatatattatgcattgtcctta 45029647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 47806256 - 47806296
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    ||||| |||| ||| ||||||||||||||||||||||||||    
T  47806256 gggttcgaaccccagaccttgcatatattatgcattgtcct 47806296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 49952686 - 49952714
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  49952686 accttgcatatattatgcattgtccttat 49952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 51450273 - 51450233
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  51450273 gggtttgaactccggaccttgcatatcttatgcattgtcct 51450233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 56497614 - 56497650
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  56497614 gaaccccagaccttgcatatattatgcattgtcctta 56497650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 27858635 - 27858733
Alignment:
Q  142 ttaatatagcaagataatagtgtaagagtaagactacaagaactcatcactttgcacaatgatactaagacaagattgacaaagaaatccatataactta 241  Q
    |||||||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27858635 ttaatatatcaagataatagtg--agagtaagactacaagtactcatcactttgcacaatgatactaagacaagattgacaaagaaatccatataagtta 27858732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 6384913 - 6384862
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtccttattgactga 324  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||| |||||    
T  6384913 agggttcgaaccccagaccttgcatatattatgcattgtccttattaactga 6384862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 30857309 - 30857270
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  30857309 gggtttgaactcaaaaccttgcatatattatgcattgtcc 30857270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 3671885 - 3671848
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3671885 gggtttgaactccagaccttgcatatattatgcattgt 3671848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 19036102 - 19036142
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  19036102 gggtttgaactccagaccttgcatattttatgcattgtcct 19036142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 20718534 - 20718494
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  20718534 gggtttgaactccagaccttgcatattttatgcattgtcct 20718494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 33473536 - 33473576
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaa 329  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  33473536 accttgcatatattatgcattgtccttgctgactgaactaa 33473576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 4905337 - 4905298
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  4905337 gggtttgaactccgaaccttgcatattttatgcattgtcc 4905298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 7872748 - 7872807
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||   ||||| ||||||||    
T  7872748 gggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagttc 7872807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 27263402 - 27263363
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  27263402 gggttcgaactccgaaccttgcatatattatgcattgtcc 27263363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 39926539 - 39926594
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||| || ||| ||||||||||||||||||||||||||  ||||| |||||    
T  39926539 ggtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaag 39926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 40200955 - 40200994
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  40200955 gggtttgaactccaaaccctgcatatattatgtattgtcc 40200994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 18714509 - 18714467
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| ||  ||||||||||||||||||||||||||||    
T  18714509 gggtttgaaccccggaccttgcatatattatgcattgtcctta 18714467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 27270295 - 27270257
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  27270295 ggttcgaactccgaaccttgcatatattatgcattgtcc 27270257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 311
Target Start/End: Complemental strand, 34807277 - 34807243
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||| ||||||||||||||||||||||||||||    
T  34807277 tttgaaatccaaaccttgcatatattatgcattgt 34807243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 46849107 - 46849145
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  46849107 gggtttgaactccaaactttacatatattatgcattgtc 46849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 1720078 - 1720119
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  1720078 gggtttgaactcgagagcttgcatatattatgcattgtcctt 1720119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 5041398 - 5041361
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  5041398 gtttgaaccccagaccttgcatatattatgcattgtcc 5041361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 9522973 - 9522936
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  9522973 gggttcgaaccccaaaccttgcatatattatgcattgt 9522936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 11908980 - 11909017
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  11908980 gtttgaacaccagaccttgcatatattatgcattgtcc 11909017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 23413048 - 23413085
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||  |||||||||||||||||||||||||    
T  23413048 gtttgaactcccgaccttgcatatattatgcattgtcc 23413085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 44651664 - 44651623
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  44651664 gtttgaacttcgaaccttgcatatattatgcattgtcattat 44651623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 47342436 - 47342473
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||  |||||||||||||||||||||||||    
T  47342436 gtttgaactccggaccttgcatatattatgcattgtcc 47342473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 48527245 - 48527208
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||||||  |||||||||||||||||||||||||||||    
T  48527245 gaactccggaccttgcatatattatgcattgtccttat 48527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 1077046 - 1077010
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcatt 309  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  1077046 agggtttgaaccccaaaccttgcatatatcatgcatt 1077010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 3533023 - 3533063
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaa 329  Q
    |||||||||||||||||||||||||||| | ||||| ||||    
T  3533023 accttgcatatattatgcattgtccttactaactgagctaa 3533063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 20763215 - 20763175
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  20763215 gggtttgaactccggaccttgcatattttatgcattgtcct 20763175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 22777374 - 22777402
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  22777374 accttgcatatattatgcattgtccttat 22777402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 23374633 - 23374665
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcatt 309  Q
    ||||||||||||||||| |||||||||||||||    
T  23374633 tttgaactccaaaccttacatatattatgcatt 23374665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 26946631 - 26946667
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| |||||||||||||||| |||||||||||||||    
T  26946631 gaacaccaaaccttgcatatactatgcattgtcctta 26946667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 27279403 - 27279471
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcgggaaca 342  Q
    ||||||||||  |||||||| |||||||||| |||||||  || | |||||||||||||| || |||||    
T  27279403 gggtttgaacctcaaaccttacatatattatacattgtctatactaactgaactaagttcacgagaaca 27279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 29488781 - 29488741
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  29488781 gggtttgaactccggaccttgcatattttatgcattgtcct 29488741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 33232397 - 33232437
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  33232397 gggtttgaactccggaccttgcatattttatgcattgtcct 33232437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 34284539 - 34284579
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  34284539 gggtttgaactccggaccttgcatattttatgcattgtcct 34284579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 34568347 - 34568391
Alignment:
Q  288 aaccttgcatatattatgcattgtccttattgactgaactaagtt 332  Q
    |||||||||||||||||||||| |||||||  ||||| |||||||    
T  34568347 aaccttgcatatattatgcattatccttatcaactgagctaagtt 34568391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 43998625 - 43998593
Alignment:
Q  285 ccaaaccttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||| ||||||||||||||||    
T  43998625 ccaaaccttgcatatactatgcattgtccttat 43998593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 5934661 - 5934600
Alignment:
Q  166 agagtaagactacaagaactcatcactttgcacaatgatactaagacaagattgacaaagaa 227  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5934661 agagtaagactacaagaactcatgactttgcacaatgatactaagacaagattgacaaagaa 5934600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 14741854 - 14741813
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  14741854 ggttcgaactccaaaccttgcatatattatgcattgtcctta 14741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 14030735 - 14030774
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  14030735 gggtttgaactccaaaccttgcatatattatgcgttgtcc 14030774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 10594742 - 10594696
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||    
T  10594742 tccaaggtttgaaccctaaaccttgcatatattatgcattgtcctta 10594696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 54230099 - 54230141
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||||||||||||||||||||||||||||||||    
T  54230099 gggttcgaaccccaaaccttgcatatattatgcattgtcctta 54230141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 2753705 - 2753758
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaacta 328  Q
    ||||||||| ||||| ||||||||||||||||||||||| || | |||||||||    
T  2753705 ggtttgaaccccaaatcttgcatatattatgcattgtccatactaactgaacta 2753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 8127523 - 8127482
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  8127523 ggtttgaaccccaaaccttgcatattttatgcattgtcctta 8127482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 20612277 - 20612314
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20612277 gggtttgaaccccaaaccttgcatatattatgcattgt 20612314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 2078299 - 2078263
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    |||||||| ||||||||||||||||||||||||||||    
T  2078299 gtttgaaccccaaaccttgcatatattatgcattgtc 2078263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 4216414 - 4216458
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||    
T  4216414 accttgcatatattatgcattgtccttatcaactgagctaagttc 4216458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 45096072 - 45096028
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||    
T  45096072 accttgcatatattatgcattgtccttatcaactgagctaagttc 45096028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 45254286 - 45254250
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||| ||||||||||||||||||||||    
T  45254286 gaactccaaaccttacatatattatgcattgtcctta 45254250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 4668747 - 4668708
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  4668747 cagggtttgaactccaaactttacatatattatgcattgt 4668708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 316
Target Start/End: Complemental strand, 10926527 - 10926488
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  10926527 tttgaaccccgaaccttgcatatattatgcattgtcctta 10926488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 25441500 - 25441539
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  25441500 gggtttgaaccccagaccttgcatatattatgcattgtcc 25441539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 39779085 - 39779046
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  39779085 gggtttgaaccccgaaccttgcatatattatgcattgtcc 39779046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 48234453 - 48234492
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  48234453 gggtttaaactccaaaccatgcatatattatgcattgtcc 48234492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 1149065 - 1149111
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| |||| | | ||||||||||||||||||||||||||||    
T  1149065 tccagggttcgaaccctagaccttgcatatattatgcattgtcctta 1149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 2153498 - 2153540
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||    
T  2153498 ccagggtttaaaccccagaccttgcatatattatgcattgtcc 2153540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 21914071 - 21914113
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  21914071 gggttcgaaccccataccttgcatatattatgcattgtcctta 21914113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 25505701 - 25505743
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  25505701 gggttcgaaccccagaccttgcatatattatgcattgtcctta 25505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 316
Target Start/End: Complemental strand, 30200875 - 30200845
Alignment:
Q  286 caaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||||    
T  30200875 caaaccttgcatatattatgcattgtcctta 30200845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 35191817 - 35191859
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  35191817 gggttcgaaccccagaccttgcatatattatgcattgtcctta 35191859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 39083834 - 39083872
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||| || |||||||||||||||||||||||    
T  39083834 ggtttgaactccgaatcttgcatatattatgcattgtcc 39083872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 45432012 - 45431970
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| ||  |||||||||||||||||||||||||    
T  45432012 ccagggtttgaaccccggaccttgcatatattatgcattgtcc 45431970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 52119437 - 52119395
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| || |||||||||||||||||||||||||||||    
T  52119437 gggttcgaaccccgaaccttgcatatattatgcattgtcctta 52119395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 52172788 - 52172826
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  52172788 ggtttgaactccagatcttgcatatattatgcattgtcc 52172826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 977939 - 977980
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  977939 caggatttgaactccggaccttgcatatattatgcattgtcc 977980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 8238623 - 8238586
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  8238623 gtttgaaccccagaccttgcatatattatgcattgtcc 8238586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 317
Target Start/End: Complemental strand, 8957991 - 8957962
Alignment:
Q  288 aaccttgcatatattatgcattgtccttat 317  Q
    ||||||||||||||||||||||||||||||    
T  8957991 aaccttgcatatattatgcattgtccttat 8957962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 19880285 - 19880248
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  19880285 gggtttgaactccgaaccttgcatttattatgcattgt 19880248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 21245853 - 21245812
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||    
T  21245853 ggtttgaaccccagaccttacatatattatgcattgtcctta 21245812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 25917600 - 25917641
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  25917600 accttgcatatattatgcattgtccttgtaaactgaactaag 25917641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 25955295 - 25955332
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||||||||||| | |||||||||||||    
T  25955295 gtttgaactccaaaccttgcatgttttatgcattgtcc 25955332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 35863814 - 35863855
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||    
T  35863814 ggtttgaaccccagaccttgcatatattatgtattgtcctta 35863855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 38221786 - 38221725
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcggg 338  Q
    ||||||| |||||| ||| |||||||||||||||| |||||  ||| |||||||||| ||||    
T  38221786 tttgaaccccaaactttgtatatattatgcattgttcttatcaactaaactaagttcacggg 38221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 49975807 - 49975844
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  49975807 gtttgaaccccagaccttgcatatattatgcattgtcc 49975844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 916500 - 916460
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  916500 gggtttgaactccggaccttgcatattttatgcattgtcct 916460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 16980368 - 16980396
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  16980368 aaccttgcatatattatgcattgtcctta 16980396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 28266762 - 28266722
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaa 329  Q
    ||||||||||||||||||||||||||||   ||||||||||    
T  28266762 accttgcatatattatgcattgtccttaccaactgaactaa 28266722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 38630111 - 38630151
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  38630111 gggtttgaactccagacattgcatatattatgcactgtcct 38630151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 41259018 - 41258990
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  41259018 aaccttgcatatattatgcattgtcctta 41258990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 41817561 - 41817521
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||| ||  |||||||||||||||||||||||||    
T  41817561 agggtttgaaccccggaccttgcatatattatgcattgtcc 41817521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 44075156 - 44075196
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  44075156 gggtttgaactccggaccttgcatattttatgcattgtcct 44075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 45334247 - 45334207
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||| || |||||||||||||||||||||||| |||||    
T  45334247 tttgaaccccgaaccttgcatatattatgcattgttcttat 45334207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 21874655 - 21874713
Alignment:
Q  184 ctcatcactttgcacaatgatactaagacaagattgacaaagaaatccatataacttat 242  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  21874655 ctcatcactttgcacaatgatgctaagataagattgacaaagaaatccatataagttat 21874713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 43356496 - 43356456
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  43356496 gggtttgaactccaaaccttacatatattatgcattgtcct 43356456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 42045372 - 42045411
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  42045372 gggtttgaactccagaccttgcatatattatgcattgtcc 42045411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 47417843 - 47417804
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  47417843 ggtttgaactccgaaccttgcatatattatgcattgtcct 47417804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 29987112 - 29987153
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  29987112 gggttcgaactccagaccttgcatatattatgcattgtcctt 29987153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 10132440 - 10132508
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcggg 338  Q
    |||| |||| |||| ||| ||||||||||||||||||||||||||||   ||||| |||||||| ||||    
T  10132440 tccaaggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgatctaagttcacggg 10132508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 45190268 - 45190328
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||||||  || |||||||||||||||||||||||||| ||   ||||||||||||||    
T  45190268 agggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgaactaagttc 45190328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 27533304 - 27533265
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  27533304 gggtttgaaccccgaaccttgcatatattatgcattgtcc 27533265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 41974822 - 41974767
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaa 329  Q
    ||||||||||  |||||||||||||||||||||||| ||| |||  ||||||||||    
T  41974822 gggtttgaacctcaaaccttgcatatattatgcattatccctatcaactgaactaa 41974767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 5279371 - 5279409
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  5279371 ggtttgaactccagacattgcatatattatgcattgtcc 5279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 27449443 - 27449501
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||| |  || ||||||||||||||||||||||| |||| ||||| |||||    
T  27449443 cagggtttgaaccctgaatcttgcatatattatgcattgtccatattaactgagctaag 27449501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 30548092 - 30548133
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| || |||||||||||||||||||||||||||||    
T  30548092 gggtttgaac-ccgaaccttgcatatattatgcattgtcctta 30548133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 45677346 - 45677304
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||    
T  45677346 gggtttgaactccaaaccttacatatgttatgcattatcctta 45677304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 48100782 - 48100744
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  48100782 ggtttgaaccccaaaccttgcatattttatgcattgtcc 48100744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 64679 - 64720
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||  || |||||||||||||||||||||||||    
T  64679 ggtttgaactccggactttgcatatattatgcattgtcctta 64720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 5270742 - 5270775
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcatt 309  Q
    ||||||||||||||| ||||||||||||||||||    
T  5270742 gtttgaactccaaactttgcatatattatgcatt 5270775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 9639818 - 9639859
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| |||||||  ||||||||||||||||||||||||||||    
T  9639818 ggttcgaactccggaccttgcatatattatgcattgtcctta 9639859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 10843336 - 10843385
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttcgcggg 338  Q
    ||||||||||||||||||||| |||||||  ||||| |||||||| ||||    
T  10843336 accttgcatatattatgcattatccttatcaactgagctaagttcacggg 10843385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 11681284 - 11681247
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  11681284 gggtttgaaccccagaccttgcatatattatgcattgt 11681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 16033452 - 16033489
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  16033452 gtttgaaccccagaccttgcatatattatgcattgtcc 16033489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 22335419 - 22335378
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  22335419 gggtttgaacctcagaccttgcatatattatgcattgtcctt 22335378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 23334647 - 23334610
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  23334647 gtttgaacttcaaaccttgcatattttatgcattgtcc 23334610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 26329121 - 26329178
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||| ||||||| |||||||||| ||||||||||||| |||||  ||||| |||||    
T  26329121 agggttcgaactccgaaccttgcatgtattatgcattgttcttatcaactgagctaag 26329178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 42416858 - 42416821
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  42416858 gaaccccaaaccttgcatatattatgcattatccttat 42416821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 42440147 - 42440184
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattg 310  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  42440147 agggtttgaactccagaccttacatatattatgcattg 42440184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 44678014 - 44678055
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||| ||||||| || |||||||||||||||||||||||||    
T  44678014 ccaggatttgaaccccgaaccttgcatatattatgcattgtc 44678055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 7610167 - 7610211
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||||||| ||| |||||||||||||||||||| |||||||    
T  7610167 caggatttgaaccccagaccttgcatatattatgcatcgtcctta 7610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 13401658 - 13401602
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||| || |||||| ||||||||||||||||||  |||  |||||||||||    
T  13401658 gggtttgaaccccgaaccttacatatattatgcattgtctctatcaactgaactaag 13401602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 16307710 - 16307670
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  16307710 gggtttgatccccagaccttgcatatattatgcattgtcct 16307670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 313
Target Start/End: Original strand, 19020595 - 19020627
Alignment:
Q  281 aactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||| |||||||||||||||||||||||||||    
T  19020595 aactctaaaccttgcatatattatgcattgtcc 19020627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 19533189 - 19533221
Alignment:
Q  285 ccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||| |||||||||||||||||||||||||||    
T  19533189 ccaaatcttgcatatattatgcattgtccttat 19533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 24124844 - 24124872
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  24124844 aaccttgcatatattatgcattgtcctta 24124872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 25533034 - 25532978
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||| ||  ||||||||||||||||||||||||| ||   |||||||||||    
T  25533034 gggtttgaaccccggaccttgcatatattatgcattgtccataccaactgaactaag 25532978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 32950762 - 32950798
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||||  |||||||||||||||||||||||    
T  32950762 ggtttgaactccggaccttgcatatattatgcattgt 32950798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 34808577 - 34808605
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  34808577 aaccttgcatatattatgcattgtcctta 34808605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 43843938 - 43843910
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  43843938 aaccttgcatatattatgcattgtcctta 43843910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 47719113 - 47719149
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  47719113 gaactccgaaccttgcatatattatgcattatcctta 47719149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 788927 - 788885
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  788927 gggtttgaactccgaaccttgcatatattatgcattgtcctta 788885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 7082992 - 7083034
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  7082992 gggtttgaactccagatcttgcatatattatgcattgtcctta 7083034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 12735240 - 12735282
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  12735240 ccagggtttgaaccccaaaccttgcatattttatgcattgtcc 12735282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 12582229 - 12582269
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  12582229 gggtttgaactccagaccttgcatattttatgcattgtcct 12582269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 28046190 - 28046234
Alignment:
Q  286 caaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||    
T  28046190 caaaccttgcatatattatgcattgtctttatcaactgaactaag 28046234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 311
Target Start/End: Original strand, 12904319 - 12904354
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||| ||||||||||||||||||||||||    
T  12904319 gtttgaactccgaaccttgcatatattatgcattgt 12904354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 316
Target Start/End: Complemental strand, 14679175 - 14679144
Alignment:
Q  285 ccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||||||||||||||||||||||    
T  14679175 ccaaaccttgcatatattatgcattgtcctta 14679144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 20744199 - 20744160
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  20744199 gggtttgaaccccagaccttgcatatattatgcattgtcc 20744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 33824941 - 33824886
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||| ||  |||||||||||||||||||||||||||||  ||||| |||||    
T  33824941 ggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaag 33824886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 3487978 - 3487928
Alignment:
Q  288 aaccttgcatatattatgcattgtccttattgactgaactaagttcgcggg 338  Q
    |||||||||||||||||||||| | |||||  |||||||||||||| ||||    
T  3487978 aaccttgcatatattatgcattattcttatcaactgaactaagttcacggg 3487928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 8629697 - 8629735
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  8629697 ggtttgaaccccgaaccttgcatatattatgcattgtcc 8629735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 14169546 - 14169588
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||    
T  14169546 ggtttgaaccccaaatcttgcatatattctgcattgtccttat 14169588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 23629837 - 23629875
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  23629837 gggtttgaacttcataccttgcatatattatgcattgtc 23629875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 28898917 - 28898875
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||  ||||| ||||||||||||||||||||||    
T  28898917 gggtttgaactccggacctttcatatattatgcattgtcctta 28898875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 331887 - 331924
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  331887 ggtttgaatcccaaaccttgcatatattatgcattgtc 331924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 1535365 - 1535308
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||| |||| ||| |||||||||||||||||||||| | |||  |||||||||||    
T  1535365 agggtttaaacttcaatccttgcatatattatgcattgttcctatcaactgaactaag 1535308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 3808133 - 3808182
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttcgcggg 338  Q
    |||||||||||||||||||||||||||| | |||||  ||||||| ||||    
T  3808133 accttgcatatattatgcattgtccttactaactgagttaagttcacggg 3808182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 9977120 - 9977083
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcatt 309  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  9977120 cagggtttgaaccccagaccttgcatatattatgcatt 9977083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 13496177 - 13496140
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||||||  |||||||||||||||||||||||    
T  13496177 gggtttgaactccggaccttgcatatattatgcattgt 13496140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 15155795 - 15155754
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||    
T  15155795 ggtttgaaccccagaccttgcatatattatgcattgtactta 15155754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 18256929 - 18256888
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||||||||||||||||||||  ||||| |||||    
T  18256929 accttgcatatattatgcattgtccttatcaactgagctaag 18256888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 23507389 - 23507450
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||| |||| ||||||||| ||||| ||||| ||||||||||   ||||||||||||||    
T  23507389 cagggttcgaaccccaaaccttacatattttatgtattgtccttaccaactgaactaagttc 23507450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 26356083 - 26356120
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| || ||||||||||||||||||||||||||    
T  26356083 gtttgaaccccgaaccttgcatatattatgcattgtcc 26356120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 30374533 - 30374574
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||  |||||||||||||||||||| |||||||||||    
T  30374533 ggtttgaatcccaaaccttgcatatattatacattgtcctta 30374574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 30579918 - 30579881
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  30579918 gtttgaaccccaaaccttgcatattttatgcattgtcc 30579881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 31971593 - 31971548
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||  |  ||||||||||||||||||||||||||||    
T  31971593 ccagggtttgaacctcggaccttgcatatattatgcattgtcctta 31971548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 247720 - 247680
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  247720 gggtttgaactccggaccttgcatattttatgcattgtcct 247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 2306859 - 2306895
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  2306859 gaactccaaaccttgaatatattatacattgtcctta 2306895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 304
Target Start/End: Complemental strand, 5954670 - 5954642
Alignment:
Q  276 gtttgaactccaaaccttgcatatattat 304  Q
    |||||||||||||||||||||||||||||    
T  5954670 gtttgaactccaaaccttgcatatattat 5954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 9333981 - 9334021
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  9333981 ggttcgaaccccaaaccttacatatattatgcattgtcctt 9334021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 12735154 - 12735182
Alignment:
Q  286 caaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||||||||||||||||||    
T  12735154 caaaccttgcatatattatgcattgtcct 12735182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 11603838 - 11603879
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  11603838 ggtttgaactcccaaccttgcatatattatgcattgtcctta 11603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 32944986 - 32944943
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  32944986 gggtttgaacttcagaccttgcatatattatgcattgtccttat 32944943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 32115407 - 32115461
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaa 329  Q
    ||||||||| || |||||| ||||||||||||||||||| |||| ||||||||||    
T  32115407 ggtttgaaccccgaaccttacatatattatgcattgtccatattaactgaactaa 32115461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 6038277 - 6038334
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||||| ||||| ||||||||||||||||||| |||  ||||| ||||||||    
T  6038277 gtttgaactccagaccttacatatattatgcattgtccatatcaactgagctaagttc 6038334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 7869641 - 7869681
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  7869641 gggtttgaacccccaaccttgcatatattatgcattgtcct 7869681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 12674866 - 12674905
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  12674866 ggtttgaactccaaatcttgcatatattatgtattgtcct 12674905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 14258072 - 14258017
Alignment:
Q  278 ttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||| |||||||| |||||||||||||||||||| |  ||||| ||||||||    
T  14258072 ttgaactctaaaccttgtatatattatgcattgtccttgtcaactgagctaagttc 14258017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 312
Target Start/End: Original strand, 27571852 - 27571887
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||| ||||||||||||||||||||||||||||    
T  27571852 tttgaaccccaaaccttgcatatattatgcattgtc 27571887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 29376962 - 29376923
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  29376962 gggtttgaactccagaccttgcatatattacgcattgtcc 29376923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 32223880 - 32223935
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||||| || |||||||||||||||||||||  |||  |||||||||||    
T  32223880 ggtttgaactccagactttgcatatattatgcattgtctctatcaactgaactaag 32223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 39821945 - 39821906
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  39821945 gggtttgaaccccagaccttgcatatattatgcattgtcc 39821906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 8717476 - 8717514
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  8717476 ggtttgaaccccgaaccttgcatatattatgcattgtcc 8717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 20275189 - 20275231
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| || |||||||||| ||||||||||||||||||    
T  20275189 gggtttgaaccccgaaccttgcatgtattatgcattgtcctta 20275231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 21061816 - 21061858
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| || |||||||||| ||||||||||||||||||    
T  21061816 gggtttgaaccccgaaccttgcatgtattatgcattgtcctta 21061858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 26991758 - 26991796
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  26991758 ggtttgaaccacaaaccttgcatatattatgcattgtcc 26991796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 27718896 - 27718950
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||  ||||||||||||||||||||||||| |||  ||||| |||||    
T  27718896 gtttgaactccggaccttgcatatattatgcattgtccatatcaactgagctaag 27718950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 30623354 - 30623312
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  30623354 gggttcgaaccccagaccttgcatatattatgcattgtcctta 30623312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 38763512 - 38763554
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| |||| ||| |||||||||||||||||||||||||    
T  38763512 ccagggttcgaaccccagaccttgcatatattatgcattgtcc 38763554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 20469311 - 20469348
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  20469311 gggttcgaactccgaaccttgcatatattatgcattgt 20469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 37141416 - 37141379
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| || ||||||||||||||||||||||||||    
T  37141416 gtttgaaccccgaaccttgcatatattatgcattgtcc 37141379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 44794953 - 44794916
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  44794953 ggtttgaactccggaccttgcatatattatgcattgtc 44794916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 5179852 - 5179812
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  5179852 gtttgaaccccgaaccttgtatatattatgcattgtcctta 5179812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 6447247 - 6447211
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6447247 tttgaactccggaccttgcatatattatgcattgtcc 6447211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 9014675 - 9014715
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||| |||||||| ||||||||||||||||| ||||||    
T  9014675 cagggttcgaactccagaccttgcatatattatgtattgtc 9014715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 12714373 - 12714409
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||| || ||||||||||||||||||||||||||    
T  12714373 tttgaaccccgaaccttgcatatattatgcattgtcc 12714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 20665363 - 20665403
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  20665363 gggtttgaactccggaccttgcatattttatgcattgtcct 20665403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 30550726 - 30550766
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  30550726 gggtttgaactccggaccttgcatattttatgcattgtcct 30550766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 31888072 - 31888020
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttcgcgggaac 341  Q
    |||||||||||||||| |||||||||||   ||||| |||||||| |||||||    
T  31888072 accttgcatatattatccattgtccttaccaactgagctaagttcacgggaac 31888020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 33763861 - 33763833
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  33763861 accttgcatatattatgcattgtccttat 33763833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 40469031 - 40468975
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||| || |||||||||||||| ||| |||||||   ||||||||||||||    
T  40469031 tttgaactccgaatcttgcatatattatacatcgtccttacaaactgaactaagttc 40468975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 41752186 - 41752214
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  41752186 accttgcatatattatgcattgtccttat 41752214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 44215475 - 44215515
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  44215475 gggtttgaactccggaccttgcatattttatgcattgtcct 44215515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Original strand, 22354943 - 22355008
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcggga 339  Q
    |||||||||| ||| | ||||||||||||||||||||||||||  ||||||| ||||||| |||||    
T  22354943 gggtttgaacaccagatcttgcatatattatgcattgtccttaccgactgaattaagttcacggga 22355008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 35194282 - 35194319
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35194282 gtttgaactccaaaccttgcatatattatgcattgtcc 35194319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 9547409 - 9547448
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  9547409 gggtttgaaccccaaaccttgcatatattatgcattgtcc 9547448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 317
Target Start/End: Original strand, 40967372 - 40967414
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  40967372 ggtttgaacctcaaaccttgcatatattatgcattgtccttat 40967414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 44488011 - 44488065
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaa 329  Q
    |||||||||||| |||||| ||||||||||||||||||||||   ||||||||||    
T  44488011 ggtttgaactccgaaccttacatatattatgcattgtccttaccaactgaactaa 44488065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 4897607 - 4897562
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||   ||||||||||||||||||||||||||||||    
T  4897607 ccagggtttgaaccataaaccttgcatatattatgcattgtcctta 4897562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 4945001 - 4944956
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||   ||||||||||||||||||||||||||||||    
T  4945001 ccagggtttgaaccataaaccttgcatatattatgcattgtcctta 4944956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 316
Target Start/End: Original strand, 18231482 - 18231515
Alignment:
Q  283 ctccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||||||||||||||||||||||||    
T  18231482 ctccaaaccttgcatatattatgcattgtcctta 18231515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 23407016 - 23407057
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  23407016 cagggtttgaaccccagaccttgcatatattatgcattgtcc 23407057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 29896294 - 29896331
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29896294 gggtttgaaccccaaaccttgcatatattatgcattgt 29896331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 5028917 - 5028877
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  5028917 gggtttgaaccccaaaccttacatatattatgcattgtcct 5028877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 18611964 - 18612000
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18611964 ggtttgaaccccaaaccttgcatatattatgcattgt 18612000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 26400810 - 26400770
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  26400810 gtttgaacacccaaccttgcatatattatgcattgtcctta 26400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 12413554 - 12413511
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||||  || |||||||||||||||||||||||||||||    
T  12413554 gggtttgaacctcagaccttgcatatattatgcattgtccttat 12413511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 12425614 - 12425571
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||||||||  || |||||||||||||||||||||||||||||    
T  12425614 gggtttgaacctcagaccttgcatatattatgcattgtccttat 12425571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 311
Target Start/End: Complemental strand, 19160000 - 19159965
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgt 311  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19160000 gtttgaactccgaaccttgcatatattatgcattgt 19159965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 316
Target Start/End: Original strand, 20120724 - 20120763
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  20120724 tttgaaccccgaaccttgcatatattatgcattgtcctta 20120763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 22267573 - 22267535
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  22267573 gggtttgaactc-aaaccttgcatatattatgcattgtcc 22267535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 24592846 - 24592885
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  24592846 gggtttgaaccccagaccttgcatatattatgcattgtcc 24592885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 316
Target Start/End: Complemental strand, 2264862 - 2264816
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||    
T  2264862 tccagggttcgaaccccaaaccttacatatattatgcattttcctta 2264816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 9537004 - 9537062
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||  ||| ||||||||||||||||||| ||||||| |||| | |||||||||||    
T  9537004 cagggttcaaaccccaaaccttgcatatattaggcattgttcttactaactgaactaag 9537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 10195660 - 10195718
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||||||| | ||||||||||||||||||| ||| |||  ||||| |||||    
T  10195660 cagggtttgaactccagatcttgcatatattatgcattatccatatcaactgagctaag 10195718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 308
Target Start/End: Original strand, 15447714 - 15447748
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcat 308  Q
    |||||||||||||| ||||||||||||||||||||    
T  15447714 gggtttgaactccagaccttgcatatattatgcat 15447748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 19213022 - 19212980
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||| | |||||||||||||||||| |||||||    
T  19213022 ccagggtttgaacttcgaaccttgcatatattatgtattgtcc 19212980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 22520279 - 22520209
Alignment:
Q  273 agggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttcgcgggaacat 343  Q
    |||||||||||  ||  |||||||||||||||||||||| |||| | ||||||||||| || |||| ||||    
T  22520279 agggtttgaacctcaggccttgcatatattatgcattgttcttactaactgaactaagctcacggggacat 22520209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 40799611 - 40799653
Alignment:
Q  291 cttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||||||||||||||||||||  || |||||||||||    
T  40799611 cttgcatatattatgcattgtccttatcaaccgaactaagttc 40799653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 43117190 - 43117232
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||  || ||||||||||||||||||||||||||||    
T  43117190 gggtttgaacctcagaccttgcatatattatgcattgtcctta 43117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 3113742 - 3113783
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||| |||||||||||||||||  |||||||||||    
T  3113742 accttgcatattttatgcattgtccttatcaactgaactaag 3113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 3904265 - 3904224
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||| ||| ||||| |||||||||||||||||||    
T  3904265 cagggtttgaaccccagaccttacatatattatgcattgtcc 3904224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 316
Target Start/End: Complemental strand, 12124744 - 12124703
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| |||||||  ||||||||||||||||||||||||||||    
T  12124744 ggttcgaactccggaccttgcatatattatgcattgtcctta 12124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 16877179 - 16877146
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||| ||||||||||||||||||||||||||    
T  16877179 gaactccgaaccttgcatatattatgcattgtcc 16877146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 16989310 - 16989277
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||| ||||||||||||||||||||||||||    
T  16989310 gaactccgaaccttgcatatattatgcattgtcc 16989277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 3708754 - 3708714
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  3708754 gggtttgaactccggaccttgcatattttatgcattgtcct 3708714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 4056845 - 4056809
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||  ||||||||||||||||||||||||||||    
T  4056845 gaactccggaccttgcatatattatgcattgtcctta 4056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 5980273 - 5980245
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  5980273 accttgcatatattatgcattgtccttat 5980245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 7302156 - 7302212
Alignment:
Q  289 accttgcatatattatgcattgtccttattgactgaactaagttcgcgggaacatta 345  Q
    ||||||||||| ||||||||||||| |||  ||||| |||||||| || ||||||||    
T  7302156 accttgcatattttatgcattgtccctatcaactgagctaagttcacgagaacatta 7302212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 9383220 - 9383248
Alignment:
Q  285 ccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||||||||||||||||||||||    
T  9383220 ccaaaccttgcatatattatgcattgtcc 9383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 9391766 - 9391806
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||| ||||||||| ||||||| ||||||||||||||    
T  9391766 gtttgaaccccaaaccttacatatatcatgcattgtcctta 9391806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 11868662 - 11868702
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  11868662 gggtttgaactccggaccttgcatattttatgcattgtcct 11868702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 16204832 - 16204860
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  16204832 accttgcatatattatgcattgtccttat 16204860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 311
Target Start/End: Complemental strand, 19967478 - 19967442
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  19967478 ggtttgaactccgaaccttgcacatattatgcattgt 19967442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 22359068 - 22359024
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||| |  | ||||||||||||||||||||||||||    
T  22359068 cagggtttgaactgcggatcttgcatatattatgcattgtcctta 22359024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 24593439 - 24593395
Alignment:
Q  272 cagggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||| |||| ||  ||||||||||||||||||||||||||||    
T  24593439 cagggttcgaaccccggaccttgcatatattatgcattgtcctta 24593395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 26133534 - 26133562
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  26133534 aaccttgcatatattatgcattgtcctta 26133562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 35360055 - 35360095
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  35360055 gggtttgaactccggaccttgcatattttatgcattgtcct 35360095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 35727492 - 35727456
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  35727492 gaaccccaaaccttgcatatattatgcattgttctta 35727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 36922916 - 36922944
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  36922916 aaccttgcatatattatgcattgtcctta 36922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 39761484 - 39761456
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  39761484 accttgcatatattatgcattgtccttat 39761456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 40546377 - 40546321
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||||  | ||| |||||||||||||||||||| |||||| ||||| |||||    
T  40546377 gggtttgaacatcgaacattgcatatattatgcattgttcttattaactgagctaag 40546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 7713593 - 7713558
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcatt 309  Q
    ||||||||||||||||||||||||||||||||||||    
T  7713593 gggtttgaactccaaaccttgcatatattatgcatt 7713558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 39610342 - 39610397
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||    
T  39610342 ggtttgaactccaaacattgcatatattatgcattgtccatatcaactgagctaag 39610397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 5015341 - 5015301
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  5015341 gggtttgaactccgaaccttgcatatattattcattgtcct 5015301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 11647252 - 11647216
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||| ||||||||||||||||||||||||||||||||    
T  11647252 gaaccccaaaccttgcatatattatgcattgtcctta 11647216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 6489068 - 6489029
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  6489068 gggtttgaaccccagaccttgcatatattatgcattgtcc 6489029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 23118047 - 23118094
Alignment:
Q  270 tccagggtttgaactccaaaccttgcatatattatgcattgtccttat 317  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||||    
T  23118047 tccagagttcgaaccccaaaccttacatatattatgcattgtccttat 23118094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 28344614 - 28344559
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    ||||||||| |||||||||||||||||||| |||||||| | |  |||||||||||    
T  28344614 ggtttgaaccccaaaccttgcatatattatacattgtccctttcaactgaactaag 28344559  T

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Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 316
Target Start/End: Original strand, 36321505 - 36321536
Alignment:
Q  285 ccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||||||||||||||||||||||||    
T  36321505 ccaaaccttgcatatattatgcattgtcctta 36321536  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 5846090 - 5846048
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| ||| || |||||||||||||||||||||||||    
T  5846090 gggtttgaaccccagactttgcatatattatgcattgtcctta 5846048  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 11844451 - 11844497
Alignment:
Q  287 aaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    ||||||||||||||||||||||||||||||   ||||| ||||||||    
T  11844451 aaaccttgcatatattatgcattgtccttaccaactgagctaagttc 11844497  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 20688104 - 20688062
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||| |||||||||||  |||||||||||||||||||||||||    
T  20688104 ccagagtttgaactccggaccttgcatatattatgcattgtcc 20688062  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 30488984 - 30488930
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaag 330  Q
    |||||||| |||||||||| |||||||||||||||| | |||  |||||||||||    
T  30488984 gtttgaaccccaaaccttgtatatattatgcattgttcatatcaactgaactaag 30488930  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 5551281 - 5551318
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  5551281 gggtttgaaccccaaaccttgcatattttatgcattgt 5551318  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 8544995 - 8545032
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtccttat 317  Q
    |||||||  |||||||||||||||||||||||||||||    
T  8544995 gaactccggaccttgcatatattatgcattgtccttat 8545032  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 19248543 - 19248502
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  19248543 ccaggatttgaaccccaaacattgcatatattatgcattgtc 19248502  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 21657399 - 21657456
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagtt 332  Q
    |||||||||  |||||||| ||||||||||||||||||| ||   |||||||||||||    
T  21657399 ggtttgaacctcaaaccttacatatattatgcattgtccctacaaactgaactaagtt 21657456  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 43135061 - 43135024
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgt 311  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  43135061 gggtttgaaccccaaaccttgcatattttatgcattgt 43135024  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 596532 - 596493
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  596532 gtttgaactccga-ccttgcatatattatgcattgtcctta 596493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 37462172 - 37462132
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcct 314  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  37462172 gggtttgaactccggaccttgcatattttatgcattgtcct 37462132  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 317
Target Start/End: Complemental strand, 40446029 - 40446001
Alignment:
Q  289 accttgcatatattatgcattgtccttat 317  Q
    |||||||||||||||||||||||||||||    
T  40446029 accttgcatatattatgcattgtccttat 40446001  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 43108616 - 43108588
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  43108616 aaccttgcatatattatgcattgtcctta 43108588  T

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Target: scaffold1149 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 2392 - 2354
Alignment:
Q  275 ggtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  2392 ggtttgaaccccaaaccttgcatatattatgcattgtcc 2354  T

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Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 1307 - 1250
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtccttattgactgaactaagttc 333  Q
    |||||||||||| ||||| ||||||||||||||||||| |||  ||||| ||||||||    
T  1307 gtttgaactccagaccttacatatattatgcattgtccatatcaactgagctaagttc 1250  T

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Target: scaffold0320 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 15473 - 15510
Alignment:
Q  292 ttgcatatattatgcattgtccttattgactgaactaa 329  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15473 ttgcatatattatgcattgtccttattaactgaactaa 15510  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 15930 - 15972
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||| ||| |||||||||||||||| |||||||||||    
T  15930 gggtttgaaccccagaccttgcatatattatacattgtcctta 15972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 42337 - 42375
Alignment:
Q  277 tttgaactccaaaccttgcatatattatgcattgtcctt 315  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  42337 tttgaaccccagaccttgcatatattatgcattgtcctt 42375  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 239868 - 239826
Alignment:
Q  274 gggtttgaactccaaaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||  || |||||||||||||||||||||||||    
T  239868 gggtttgaactccggactttgcatatattatgcattgtcctta 239826  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 17559 - 17526
Alignment:
Q  280 gaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||| |||||||||||||||||||||||||||||    
T  17559 gaaccccaaaccttgcatatattatgcattgtcc 17526  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 99096 - 99059
Alignment:
Q  276 gtttgaactccaaaccttgcatatattatgcattgtcc 313  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  99096 gtttgaaccccagaccttgcatatattatgcattgtcc 99059  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 189969 - 190010
Alignment:
Q  271 ccagggtttgaactccaaaccttgcatatattatgcattgtc 312  Q
    ||||||||||||| || |||||| ||||||||||||||||||    
T  189969 ccagggtttgaaccccgaaccttacatatattatgcattgtc 190010  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 119968 - 119996
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  119968 aaccttgcatatattatgcattgtcctta 119996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 210092 - 210120
Alignment:
Q  288 aaccttgcatatattatgcattgtcctta 316  Q
    |||||||||||||||||||||||||||||    
T  210092 aaccttgcatatattatgcattgtcctta 210120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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