View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15734_low_9 (Length: 317)
Name: NF15734_low_9
Description: NF15734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15734_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 53 - 307
Target Start/End: Complemental strand, 12799269 - 12799003
Alignment:
| Q |
53 |
ttatcatttaaattgataatcctaagtaagtaccatgcatgttgacttaaagtacttcatgatgaaatatgaatgatcctatctatctgaagtgtaactg |
152 |
Q |
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| T |
12799269 |
ttattatttaaattgataatcctaagtaaggaccatgcatgttgacttaaagtacttcatgatgaaatatgaatgatcctatctatctgaagtgtaactg |
12799170 |
T |
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| Q |
153 |
ctatcatgataa------------tgtatgtacttcctcagtcaatatcgttagtgtttgctcccatttcacgtcaataatatttattaatttattcaaa |
240 |
Q |
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|||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
12799169 |
ctatcatgataacatgcactgtaatgtatgtacttcctcaatcaatatcgttagtgtttgctctcatttcacgtcaataatatttattaatttattcaaa |
12799070 |
T |
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| Q |
241 |
ctagtgaatgagggcgatgcctgaccgtactgaccgtgtcccagaagcagagaaaaagtagtctgtg |
307 |
Q |
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| T |
12799069 |
cttgtgaatgagggcgatgcctgaccgtactgaccgtgtcccagaagcagagaaaaagtagtctgtg |
12799003 |
T |
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