View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_high_13 (Length: 542)
Name: NF15735_high_13
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 498; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 15 - 528
Target Start/End: Original strand, 25897143 - 25897656
Alignment:
| Q |
15 |
gacatggaatcataaatgaactgaatttgcaatcagcagatcttgattgttcgatgaaaatttaacaactcatattccgactttgccaattcgaataaaa |
114 |
Q |
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| T |
25897143 |
gacatggaaccataaatgaactgaattcgcaatcagcagatcttgattgttcgatgaaaatttaacaactcatattccgactttgccaattcgaataaaa |
25897242 |
T |
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| Q |
115 |
tttgtatgattttcttttaacaattgagattcggctaattttcatccaacagttgaatttgtgattgttataactcatacttcatagattccattttcaa |
214 |
Q |
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| T |
25897243 |
tttgtatgattttcttttaacaattgagattcggctaattttcatccaatagttgaatttgtgattgttataactcatacttcatagattccattttcaa |
25897342 |
T |
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| Q |
215 |
agttaacaaatctcaaaaggatagaatgaatcatattctgaatttgtaaaaccgaattcgcaatcaacagatctcgattgttgaatgaaaatcgagctac |
314 |
Q |
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| T |
25897343 |
agttaacaaatctcaaaaggatagaatgaatcatattctgaatttgtaaaaccgaattcgcaatcaacagatctcgattgttgaatgaaaatcgagctac |
25897442 |
T |
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| Q |
315 |
tcctattctaactttgccaaatcgagtactacttgtctgatttttcgcaattgagatttgtagttgaatatatgattgttggaacacatacttcaaagat |
414 |
Q |
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| T |
25897443 |
tcctattctaactttgccaaatcgagtactacttgtctgatttttcgcaattgagatttgtagttgaatctatgattgttggaacacatacttcaaagat |
25897542 |
T |
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| Q |
415 |
tccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcctcagttataattcccttgcttcaagggattaaaaaatctcaaa |
514 |
Q |
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| T |
25897543 |
tccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcctcagttataattcccttgcttcaagggattaaaaaatctcaaa |
25897642 |
T |
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| Q |
515 |
aatattgaacaaat |
528 |
Q |
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| T |
25897643 |
aatattgaacaaat |
25897656 |
T |
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