View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_high_50 (Length: 298)
Name: NF15735_high_50
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 14 - 281
Target Start/End: Original strand, 41730550 - 41730816
Alignment:
| Q |
14 |
atgaattacttgatttctaatcaacgacttaagttgactgactgcagtgactgcgggaaacatgattgctgatgtttcaatttctgattgctaactgtac |
113 |
Q |
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| T |
41730550 |
atgaattacttgatttctaatcaacgacttaagttgactgactgcagtgactgtgggaaacatgattgctgatgtttcaatttctgattgctaactgtac |
41730649 |
T |
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| Q |
114 |
tagtattaatttaatgcctccatgataataaacatcatggaagttcacaatcttacatagggtatacatgatactcaacattttatgttttgctagagaa |
213 |
Q |
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| T |
41730650 |
tagtattaatttaatgcctccatgataataaacatcatggaagttcacaatcttacatagggtatacatgatactcaacattttatgttttgctagagaa |
41730749 |
T |
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| Q |
214 |
ataaagataagtttttcaataaatggaaacttgtcataaaaatgttaaaattagtacatcaaacaaat |
281 |
Q |
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| T |
41730750 |
ataaagataagtttttcaataaatggaaacttgtcataaaaatgtt-aaattagtacatcaaacaaat |
41730816 |
T |
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