View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_high_52 (Length: 283)
Name: NF15735_high_52
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_high_52 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 264
Target Start/End: Complemental strand, 43920745 - 43920498
Alignment:
| Q |
17 |
attaggatcatagttatagacttatatagaatttatttatatggctcttcgtgtaggtacttcttggagacatgggaacaggaaagactagtttagcatt |
116 |
Q |
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| T |
43920745 |
attaggatcatagttatagacttatatagaatttatttatatggctcttcttgtaggtacttcttggagacatgggaacaggaaagactagtttagcatt |
43920646 |
T |
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| Q |
117 |
aagatttgttaaaggccagttctttcagaatcaggtttacttccattttatatcaataaatgaaatatacnnnnnnnaattaatattattattattaaca |
216 |
Q |
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| T |
43920645 |
aagatttgttaaaggccagttctttcagaatcaggtttacttccatttcatatcaataaatgaaatatactttttttaattaatattattattattaaca |
43920546 |
T |
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| Q |
217 |
gagtttagtaaccttcatataaattaatgtacacataggaaccaacca |
264 |
Q |
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| T |
43920545 |
gagtttagcaaccttcatataaattaatgtacacataggaaccaacca |
43920498 |
T |
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