View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_high_65 (Length: 249)
Name: NF15735_high_65
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_high_65 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 26682719 - 26682936
Alignment:
| Q |
15 |
atgaatagaagggaaatgatggatcaaagaatagcaatgaatgaaggttataataatagaagaaaagacattgaaatgaaacaagattttgaattttcaa |
114 |
Q |
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| T |
26682719 |
atgaatagaagggaaatgatggatcaaagaatagcaatgaatgaaggttataataatagaagaaaagacattgaaatgaaacaagattttgaattttcaa |
26682818 |
T |
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| Q |
115 |
tgcattcaggaagagatgttgaaattggtgaatattttgttggtgttacagttggaacaccaggtcaaaagttttggcttattgctgatacaggaagtga |
214 |
Q |
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| T |
26682819 |
tgcattcaggaagagatgttgaaattggtgaatattttgttggtgttacagttggaacaccaggtcaaaagttttggcttattgctgatacaggaagtga |
26682918 |
T |
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| Q |
215 |
gttaacatggtttaaatg |
232 |
Q |
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| T |
26682919 |
gttaacatggtttaaatg |
26682936 |
T |
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