View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15735_low_1 (Length: 1376)

Name: NF15735_low_1
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15735_low_1
NF15735_low_1
[»] chr6 (53 HSPs)
chr6 (48-1359)||(22702948-22704259)
chr6 (48-607)||(21401709-21402254)
chr6 (48-614)||(29490812-29491385)
chr6 (277-607)||(21396653-21396983)
chr6 (206-607)||(34375873-34376270)
chr6 (206-614)||(24191126-24191531)
chr6 (206-614)||(24192223-24192628)
chr6 (218-596)||(34142041-34142418)
chr6 (218-596)||(34154657-34155034)
chr6 (206-596)||(31981528-31981904)
chr6 (206-596)||(2817901-2818277)
chr6 (48-323)||(22697772-22698044)
chr6 (395-607)||(22698172-22698386)
chr6 (48-195)||(2817401-2817548)
chr6 (48-195)||(34142781-34142928)
chr6 (48-195)||(34155397-34155544)
chr6 (458-571)||(19478138-19478251)
chr6 (461-571)||(13605087-13605197)
chr6 (48-195)||(6727777-6727924)
chr6 (48-195)||(34376464-34376611)
chr6 (48-195)||(24190654-24190802)
chr6 (48-195)||(31983475-31983622)
chr6 (334-454)||(6728285-6728394)
chr6 (460-572)||(10642698-10642811)
chr6 (468-571)||(3901902-3902006)
chr6 (464-561)||(12182998-12183096)
chr6 (465-561)||(5600971-5601068)
chr6 (528-601)||(6728397-6728472)
chr6 (461-571)||(17281558-17281669)
chr6 (458-571)||(31476007-31476120)
chr6 (458-571)||(31495833-31495946)
chr6 (458-571)||(31501219-31501332)
chr6 (458-571)||(29325525-29325639)
chr6 (466-561)||(11570749-11570845)
chr6 (1-44)||(22699741-22699784)
chr6 (458-561)||(31515723-31515826)
chr6 (468-571)||(5740792-5740896)
chr6 (466-561)||(12406353-12406449)
chr6 (466-541)||(17964559-17964635)
chr6 (466-561)||(24589164-24589260)
chr6 (466-561)||(33687603-33687699)
chr6 (206-259)||(6728193-6728246)
chr6 (466-561)||(2700106-2700202)
chr6 (466-561)||(6407860-6407956)
chr6 (466-561)||(12688970-12689066)
chr6 (518-561)||(11428042-11428085)
chr6 (465-561)||(6112972-6113068)
chr6 (466-561)||(8747781-8747877)
chr6 (466-561)||(13736678-13736774)
chr6 (466-561)||(21309030-21309126)
chr6 (466-540)||(16836156-16836231)
chr6 (531-569)||(12662673-12662711)
chr6 (526-571)||(11956762-11956807)
[»] chr4 (75 HSPs)
chr4 (48-614)||(8984987-8985553)
chr4 (48-614)||(13700457-13701023)
chr4 (48-614)||(8979867-8980433)
chr4 (48-614)||(21299415-21299981)
chr4 (48-607)||(21304535-21305094)
chr4 (48-614)||(54991433-54991989)
chr4 (206-614)||(41393192-41393584)
chr4 (196-614)||(51019117-51019521)
chr4 (206-601)||(53797589-53797970)
chr4 (48-342)||(54990392-54990686)
chr4 (206-612)||(9763771-9764167)
chr4 (206-596)||(13710634-13711010)
chr4 (206-596)||(13695124-13695503)
chr4 (206-596)||(47046060-47046438)
chr4 (74-323)||(39999363-39999609)
chr4 (74-323)||(40004321-40004567)
chr4 (74-323)||(54343497-54343743)
chr4 (74-323)||(54348651-54348897)
chr4 (74-278)||(36359664-36359868)
chr4 (74-323)||(36354436-36354682)
chr4 (395-614)||(36359239-36359460)
chr4 (395-607)||(54348309-54348523)
chr4 (394-614)||(36354121-36354343)
chr4 (395-607)||(40003979-40004193)
chr4 (395-607)||(39999021-39999235)
chr4 (395-607)||(54343155-54343369)
chr4 (74-195)||(53798329-53798450)
chr4 (48-195)||(41393858-41394005)
chr4 (458-569)||(653035-653146)
chr4 (74-195)||(51018732-51018853)
chr4 (48-195)||(9763273-9763420)
chr4 (48-195)||(13695757-13695904)
chr4 (48-195)||(13711370-13711517)
chr4 (458-571)||(10120801-10120914)
chr4 (48-195)||(4207042-4207188)
chr4 (622-748)||(12889052-12889179)
chr4 (75-195)||(47045647-47045767)
chr4 (458-559)||(8083019-8083121)
chr4 (461-570)||(24490022-24490132)
chr4 (466-561)||(37259877-37259973)
chr4 (466-561)||(31269033-31269129)
chr4 (464-572)||(34644546-34644655)
chr4 (466-561)||(5271419-5271515)
chr4 (466-561)||(13521992-13522088)
chr4 (466-561)||(31273520-31273616)
chr4 (466-561)||(33463356-33463452)
chr4 (466-561)||(37264564-37264660)
chr4 (487-571)||(39319621-39319706)
chr4 (466-561)||(31765885-31765981)
chr4 (441-570)||(5928194-5928324)
chr4 (1-44)||(13699067-13699110)
chr4 (1-44)||(21301328-21301371)
chr4 (1-44)||(36357870-36357913)
chr4 (1-44)||(40002798-40002841)
chr4 (1-44)||(54346932-54346975)
chr4 (466-571)||(10318779-10318885)
chr4 (460-572)||(17359525-17359633)
chr4 (466-561)||(8693710-8693806)
chr4 (466-561)||(16421028-16421124)
chr4 (464-555)||(30564412-30564504)
chr4 (1-44)||(8981780-8981823)
chr4 (1-44)||(13702945-13702988)
chr4 (466-559)||(31729387-31729481)
chr4 (404-449)||(54990687-54990732)
chr4 (466-561)||(2819843-2819939)
chr4 (466-561)||(12823895-12823991)
chr4 (494-569)||(34560489-34560565)
chr4 (466-561)||(55251719-55251814)
chr4 (467-561)||(42758756-42758851)
chr4 (460-561)||(3998051-3998152)
chr4 (466-561)||(33468973-33469069)
chr4 (805-861)||(54221327-54221382)
chr4 (466-559)||(19101978-19102072)
chr4 (465-550)||(31298384-31298469)
chr4 (466-550)||(8030476-8030561)
[»] chr5 (63 HSPs)
chr5 (48-614)||(17510005-17510571)
chr5 (48-607)||(42019527-42020086)
chr5 (74-614)||(17504900-17505440)
chr5 (74-614)||(41858541-41859071)
chr5 (74-484)||(43579737-43580147)
chr5 (267-614)||(41853496-41853842)
chr5 (206-615)||(36253772-36254177)
chr5 (206-614)||(1413806-1414200)
chr5 (48-348)||(42024566-42024866)
chr5 (206-607)||(26709056-26709444)
chr5 (206-607)||(26978790-26979178)
chr5 (206-596)||(24776563-24776945)
chr5 (206-596)||(24771108-24771487)
chr5 (74-184)||(41853846-41853956)
chr5 (75-195)||(1413100-1413220)
chr5 (458-569)||(13582682-13582793)
chr5 (458-569)||(14374127-14374238)
chr5 (458-569)||(24435861-24435972)
chr5 (74-195)||(36254517-36254638)
chr5 (458-566)||(7805066-7805174)
chr5 (48-195)||(24770605-24770752)
chr5 (79-195)||(26709688-26709804)
chr5 (79-195)||(26979422-26979538)
chr5 (105-195)||(24776116-24776206)
chr5 (614-749)||(36607037-36607173)
chr5 (466-572)||(28857850-28857958)
chr5 (466-561)||(37248795-37248891)
chr5 (466-561)||(26667271-26667367)
chr5 (466-561)||(26938868-26938964)
chr5 (466-561)||(29167973-29168069)
chr5 (403-561)||(36428708-36428867)
chr5 (466-561)||(556694-556790)
chr5 (466-561)||(561466-561562)
chr5 (466-561)||(7451757-7451853)
chr5 (466-561)||(12103024-12103120)
chr5 (466-561)||(36423636-36423732)
chr5 (466-561)||(36937511-36937607)
chr5 (466-561)||(36942265-36942361)
chr5 (460-569)||(21323960-21324069)
chr5 (460-569)||(31731535-31731644)
chr5 (466-579)||(31986708-31986822)
chr5 (462-561)||(13301482-13301581)
chr5 (675-770)||(27631376-27631472)
chr5 (466-561)||(32461549-32461645)
chr5 (466-561)||(39518409-39518505)
chr5 (466-561)||(39523048-39523144)
chr5 (466-561)||(42001433-42001529)
chr5 (1-44)||(17508630-17508673)
chr5 (1-44)||(41857149-41857192)
chr5 (1-44)||(42023542-42023585)
chr5 (466-561)||(6514601-6514697)
chr5 (466-561)||(10759820-10759915)
chr5 (466-561)||(12045139-12045235)
chr5 (466-561)||(12501899-12501995)
chr5 (466-561)||(41996664-41996760)
chr5 (1-44)||(24772852-24772895)
chr5 (466-561)||(3665931-3666027)
chr5 (466-561)||(12041932-12042028)
chr5 (466-561)||(12102831-12102927)
chr5 (468-561)||(40147894-40147988)
chr5 (466-561)||(6155419-6155515)
chr5 (470-561)||(25689296-25689388)
chr5 (520-561)||(20181118-20181159)
[»] scaffold0517 (2 HSPs)
scaffold0517 (74-614)||(3510-4050)
scaffold0517 (1-44)||(2120-2163)
[»] chr1 (53 HSPs)
chr1 (74-616)||(37409145-37409687)
chr1 (74-614)||(37404026-37404564)
chr1 (74-614)||(27716390-27716930)
chr1 (74-581)||(11250731-11251228)
chr1 (48-546)||(27711319-27711836)
chr1 (206-601)||(5730065-5730446)
chr1 (206-596)||(3584566-3584942)
chr1 (321-614)||(11387666-11387978)
chr1 (196-614)||(48246427-48246823)
chr1 (74-277)||(34317840-34318043)
chr1 (74-323)||(36684270-36684516)
chr1 (308-601)||(5724939-5725221)
chr1 (395-607)||(36684644-36684858)
chr1 (402-613)||(34318160-34318373)
chr1 (48-195)||(5725365-5725512)
chr1 (48-195)||(3585301-3585448)
chr1 (49-195)||(5730771-5730917)
chr1 (458-569)||(10106095-10106206)
chr1 (458-571)||(39747157-39747270)
chr1 (74-195)||(48245998-48246119)
chr1 (458-569)||(13890805-13890916)
chr1 (458-571)||(38734265-38734378)
chr1 (460-571)||(26651160-26651271)
chr1 (458-571)||(5602417-5602530)
chr1 (458-571)||(14582089-14582202)
chr1 (74-133)||(50959010-50959069)
chr1 (466-561)||(10135455-10135551)
chr1 (458-571)||(19422866-19422983)
chr1 (460-569)||(41097946-41098055)
chr1 (466-561)||(51041463-51041557)
chr1 (466-561)||(19799013-19799109)
chr1 (466-561)||(23192817-23192913)
chr1 (466-561)||(25188272-25188368)
chr1 (1-44)||(27715000-27715043)
chr1 (460-561)||(33055038-33055139)
chr1 (466-561)||(16035607-16035703)
chr1 (466-561)||(16649613-16649708)
chr1 (466-557)||(33301180-33301272)
chr1 (466-561)||(40165979-40166075)
chr1 (466-561)||(47451225-47451321)
chr1 (466-561)||(47455386-47455482)
chr1 (573-614)||(27711274-27711315)
chr1 (526-566)||(8267891-8267931)
chr1 (466-561)||(10140088-10140184)
chr1 (518-561)||(25855170-25855213)
chr1 (1-44)||(37405911-37405954)
chr1 (488-561)||(3094113-3094187)
chr1 (498-561)||(4632958-4633022)
chr1 (1-44)||(5728674-5728718)
chr1 (466-561)||(12259995-12260091)
chr1 (644-696)||(17031981-17032033)
chr1 (469-559)||(39588370-39588461)
chr1 (528-561)||(16832100-16832133)
[»] chr3 (80 HSPs)
chr3 (81-614)||(17368666-17369199)
chr3 (74-607)||(55128743-55129276)
chr3 (206-596)||(54270609-54270986)
chr3 (206-596)||(34128923-34129299)
chr3 (206-596)||(4117345-4117730)
chr3 (206-601)||(3482166-3482560)
chr3 (206-596)||(17357801-17358179)
chr3 (206-601)||(3476699-3477083)
chr3 (206-607)||(10321396-10321784)
chr3 (48-323)||(20090191-20090463)
chr3 (48-323)||(20095316-20095588)
chr3 (74-323)||(15762585-15762831)
chr3 (74-323)||(15767746-15767992)
chr3 (395-614)||(30341773-30341993)
chr3 (395-603)||(20090591-20090801)
chr3 (395-603)||(20095716-20095926)
chr3 (395-607)||(15762959-15763173)
chr3 (395-607)||(15768120-15768334)
chr3 (458-596)||(17364028-17364168)
chr3 (48-195)||(3481649-3481796)
chr3 (74-195)||(34128437-34128558)
chr3 (74-195)||(17358566-17358686)
chr3 (74-195)||(30338126-30338247)
chr3 (48-195)||(30341204-30341351)
chr3 (74-195)||(54271312-54271433)
chr3 (458-571)||(13022017-13022130)
chr3 (458-571)||(33089335-33089448)
chr3 (105-195)||(3476249-3476339)
chr3 (105-195)||(4117007-4117097)
chr3 (458-571)||(38436983-38437096)
chr3 (458-571)||(53119517-53119630)
chr3 (458-571)||(20810362-20810475)
chr3 (458-571)||(26962049-26962162)
chr3 (465-572)||(2617255-2617363)
chr3 (464-561)||(21494300-21494398)
chr3 (466-561)||(758368-758464)
chr3 (466-561)||(23666123-23666219)
chr3 (466-561)||(24038371-24038467)
chr3 (466-561)||(39775728-39775824)
chr3 (466-561)||(8069677-8069772)
chr3 (460-569)||(10586177-10586286)
chr3 (466-561)||(3672583-3672679)
chr3 (466-561)||(3692615-3692711)
chr3 (466-561)||(14438695-14438791)
chr3 (466-561)||(18467222-18467318)
chr3 (466-561)||(20520051-20520147)
chr3 (466-561)||(49971424-49971520)
chr3 (482-559)||(1688902-1688980)
chr3 (464-572)||(27605133-27605242)
chr3 (206-294)||(30338506-30338595)
chr3 (466-561)||(7571218-7571314)
chr3 (1-44)||(3478442-3478485)
chr3 (466-560)||(8883168-8883263)
chr3 (1-44)||(15764514-15764557)
chr3 (1-44)||(17362634-17362677)
chr3 (1-44)||(17367276-17367319)
chr3 (1-44)||(20092145-20092188)
chr3 (515-561)||(25726843-25726889)
chr3 (460-568)||(795399-795508)
chr3 (466-561)||(3033641-3033737)
chr3 (466-561)||(3418992-3419088)
chr3 (466-557)||(12112641-12112733)
chr3 (466-561)||(18472005-18472100)
chr3 (466-561)||(29350237-29350333)
chr3 (468-536)||(26706808-26706877)
chr3 (466-561)||(32474680-32474774)
chr3 (675-727)||(49359194-49359247)
chr3 (466-561)||(8887927-8888023)
chr3 (466-561)||(12965873-12965969)
chr3 (487-569)||(31002689-31002771)
chr3 (459-569)||(45904442-45904552)
chr3 (509-571)||(6024109-6024171)
chr3 (471-544)||(25023929-25024003)
chr3 (466-534)||(1741109-1741178)
chr3 (466-561)||(29715641-29715737)
chr3 (518-561)||(27708875-27708918)
chr3 (206-257)||(30341720-30341771)
chr3 (526-561)||(53358242-53358277)
chr3 (231-276)||(10321816-10321861)
chr3 (466-507)||(27708988-27709029)
[»] chr2 (50 HSPs)
chr2 (48-614)||(40392266-40392832)
chr2 (74-614)||(40518075-40518620)
chr2 (206-614)||(28751483-28751877)
chr2 (74-323)||(42728175-42728421)
chr2 (75-278)||(42723007-42723210)
chr2 (74-323)||(44096596-44096842)
chr2 (74-265)||(44754161-44754352)
chr2 (74-265)||(44759327-44759518)
chr2 (77-265)||(40519929-40520122)
chr2 (395-607)||(42723380-42723594)
chr2 (395-607)||(42728549-42728763)
chr2 (395-615)||(44096246-44096468)
chr2 (395-607)||(44754525-44754739)
chr2 (395-607)||(44759691-44759905)
chr2 (48-195)||(4162895-4163042)
chr2 (48-195)||(28751021-28751168)
chr2 (206-385)||(4163331-4163507)
chr2 (461-571)||(42914632-42914742)
chr2 (463-561)||(5089278-5089376)
chr2 (622-748)||(36594228-36594355)
chr2 (466-561)||(30658262-30658358)
chr2 (466-561)||(9180724-9180820)
chr2 (466-561)||(10160724-10160820)
chr2 (466-561)||(1934993-1935089)
chr2 (466-561)||(9189803-9189899)
chr2 (466-561)||(18344430-18344526)
chr2 (460-561)||(11658882-11658984)
chr2 (489-569)||(19538377-19538458)
chr2 (466-569)||(6297886-6297989)
chr2 (466-561)||(30650928-30651024)
chr2 (1-44)||(42724943-42724986)
chr2 (1-44)||(44756095-44756138)
chr2 (489-569)||(28854996-28855077)
chr2 (466-561)||(12796924-12797020)
chr2 (466-561)||(19578414-19578510)
chr2 (466-561)||(19892466-19892562)
chr2 (466-561)||(25478297-25478393)
chr2 (466-561)||(25497325-25497421)
chr2 (466-561)||(31326738-31326834)
chr2 (563-602)||(4163525-4163564)
chr2 (460-561)||(39542901-39543004)
chr2 (468-561)||(29677380-29677474)
chr2 (465-561)||(160040-160137)
chr2 (464-548)||(28945181-28945266)
chr2 (466-561)||(7737851-7737947)
chr2 (466-557)||(35601925-35602017)
chr2 (470-561)||(42926763-42926857)
chr2 (517-565)||(22844814-22844862)
chr2 (466-571)||(29907368-29907470)
chr2 (470-571)||(39542509-39542611)
[»] chr7 (63 HSPs)
chr7 (206-601)||(2234384-2234765)
chr7 (206-614)||(16539166-16539559)
chr7 (206-614)||(16626103-16626496)
chr7 (206-607)||(21080793-21081182)
chr7 (206-601)||(42571904-42572286)
chr7 (206-596)||(12934363-12934738)
chr7 (206-601)||(43892816-43893210)
chr7 (206-596)||(17495367-17495744)
chr7 (206-596)||(17557470-17557847)
chr7 (218-596)||(32212419-32212784)
chr7 (48-323)||(33238296-33238568)
chr7 (206-601)||(19309365-19309746)
chr7 (74-323)||(47994094-47994340)
chr7 (48-278)||(33243515-33243745)
chr7 (74-323)||(47999269-47999515)
chr7 (370-601)||(47177024-47177256)
chr7 (395-607)||(33237954-33238168)
chr7 (395-607)||(33243131-33243345)
chr7 (395-603)||(47998931-47999141)
chr7 (395-605)||(47993754-47993966)
chr7 (48-195)||(21080321-21080468)
chr7 (74-195)||(2233978-2234099)
chr7 (494-615)||(22857715-22857836)
chr7 (48-195)||(32211965-32212112)
chr7 (48-195)||(42572600-42572747)
chr7 (74-195)||(17496100-17496221)
chr7 (74-195)||(17556993-17557114)
chr7 (48-195)||(12935084-12935231)
chr7 (48-195)||(19308876-19309023)
chr7 (458-571)||(9973452-9973565)
chr7 (48-195)||(47176496-47176643)
chr7 (458-571)||(24528344-24528457)
chr7 (458-559)||(33226416-33226517)
chr7 (74-188)||(16538699-16538813)
chr7 (74-188)||(16626849-16626963)
chr7 (48-195)||(43893542-43893689)
chr7 (614-720)||(5888351-5888458)
chr7 (458-571)||(28292496-28292607)
chr7 (48-127)||(47544749-47544828)
chr7 (466-561)||(4579507-4579603)
chr7 (468-561)||(3357634-3357728)
chr7 (460-569)||(27256234-27256343)
chr7 (466-570)||(8076040-8076145)
chr7 (466-561)||(9650967-9651063)
chr7 (466-561)||(23246933-23247029)
chr7 (466-561)||(23866067-23866163)
chr7 (466-561)||(26341198-26341294)
chr7 (1-44)||(33241732-33241775)
chr7 (622-693)||(36935090-36935161)
chr7 (1-44)||(47997529-47997572)
chr7 (466-570)||(12254069-12254174)
chr7 (206-294)||(47176904-47176993)
chr7 (466-561)||(4930232-4930328)
chr7 (466-561)||(13314236-13314332)
chr7 (466-561)||(44423137-44423233)
chr7 (466-561)||(10388367-10388461)
chr7 (466-561)||(8268292-8268388)
chr7 (466-561)||(44510677-44510773)
chr7 (464-561)||(19640298-19640395)
chr7 (464-569)||(40865351-40865456)
chr7 (466-561)||(27238241-27238337)
chr7 (483-557)||(42627214-42627289)
chr7 (515-561)||(16372397-16372443)
[»] scaffold0594 (2 HSPs)
scaffold0594 (206-614)||(8962-9356)
scaffold0594 (48-195)||(8534-8681)
[»] scaffold0060 (3 HSPs)
scaffold0060 (196-616)||(36956-37361)
scaffold0060 (137-195)||(37654-37712)
scaffold0060 (460-569)||(47851-47960)
[»] chr8 (60 HSPs)
chr8 (206-607)||(21643835-21644222)
chr8 (196-614)||(24884660-24885064)
chr8 (292-596)||(17955626-17955919)
chr8 (206-596)||(43998984-43999360)
chr8 (326-607)||(42514245-42514515)
chr8 (74-323)||(32010820-32011066)
chr8 (74-323)||(32015994-32016240)
chr8 (48-303)||(2165394-2165650)
chr8 (395-614)||(32015645-32015866)
chr8 (206-480)||(21643395-21643652)
chr8 (48-195)||(43998546-43998693)
chr8 (48-195)||(17955134-17955281)
chr8 (74-195)||(24885324-24885445)
chr8 (458-571)||(19430004-19430117)
chr8 (458-571)||(19435506-19435619)
chr8 (458-571)||(19566153-19566266)
chr8 (458-571)||(19571655-19571768)
chr8 (458-561)||(33616719-33616822)
chr8 (206-373)||(21641520-21641684)
chr8 (206-373)||(21641895-21642059)
chr8 (206-373)||(21642270-21642434)
chr8 (206-373)||(21643020-21643184)
chr8 (48-195)||(42513848-42513995)
chr8 (206-373)||(21642645-21642809)
chr8 (458-571)||(31030518-31030631)
chr8 (622-748)||(20519763-20519890)
chr8 (105-195)||(21641184-21641273)
chr8 (622-748)||(38148632-38148759)
chr8 (504-614)||(32010483-32010595)
chr8 (465-571)||(13584340-13584454)
chr8 (466-561)||(31449866-31449962)
chr8 (466-561)||(38182237-38182333)
chr8 (466-561)||(44925923-44926019)
chr8 (466-561)||(15875668-15875764)
chr8 (466-561)||(19166633-19166729)
chr8 (466-561)||(40125885-40125981)
chr8 (1-44)||(21645577-21645620)
chr8 (1-44)||(32014255-32014298)
chr8 (395-449)||(32010605-32010659)
chr8 (466-561)||(17025934-17026030)
chr8 (466-561)||(17556426-17556522)
chr8 (466-561)||(18876367-18876462)
chr8 (466-561)||(24090626-24090722)
chr8 (466-561)||(33416546-33416642)
chr8 (214-277)||(42514182-42514245)
chr8 (468-561)||(1807471-1807565)
chr8 (466-563)||(2965627-2965725)
chr8 (460-561)||(37771711-37771812)
chr8 (466-561)||(43302718-43302815)
chr8 (466-561)||(17953873-17953969)
chr8 (466-561)||(34118465-34118561)
chr8 (466-561)||(36683578-36683674)
chr8 (518-561)||(40130739-40130782)
chr8 (466-559)||(1910969-1911063)
chr8 (468-561)||(28559656-28559750)
chr8 (494-561)||(34818726-34818794)
chr8 (464-566)||(25367991-25368093)
chr8 (488-561)||(4238337-4238411)
chr8 (488-561)||(4243076-4243150)
chr8 (528-561)||(15951584-15951617)
[»] scaffold0166 (5 HSPs)
scaffold0166 (206-601)||(13493-13877)
scaffold0166 (206-596)||(18946-19328)
scaffold0166 (48-195)||(12986-13133)
scaffold0166 (105-195)||(18500-18590)
scaffold0166 (1-44)||(15236-15279)
[»] scaffold0014 (5 HSPs)
scaffold0014 (74-323)||(31839-32085)
scaffold0014 (395-614)||(31492-31711)
scaffold0014 (74-323)||(26667-26913)
scaffold0014 (395-607)||(26325-26539)
scaffold0014 (1-44)||(30102-30145)
[»] scaffold0055 (2 HSPs)
scaffold0055 (74-323)||(3318-3564)
scaffold0055 (395-614)||(3003-3224)
[»] scaffold0052 (2 HSPs)
scaffold0052 (74-323)||(80971-81217)
scaffold0052 (395-614)||(81311-81532)
[»] scaffold0011 (2 HSPs)
scaffold0011 (458-559)||(1567-1668)
scaffold0011 (458-571)||(7036-7149)
[»] scaffold0132 (2 HSPs)
scaffold0132 (459-571)||(2765-2877)
scaffold0132 (459-571)||(10725-10837)
[»] scaffold0067 (1 HSPs)
scaffold0067 (466-571)||(33968-34074)
[»] scaffold0352 (1 HSPs)
scaffold0352 (466-561)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (466-561)||(9887-9983)
[»] scaffold0002 (1 HSPs)
scaffold0002 (466-561)||(4073-4169)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-44)||(15542-15585)
[»] scaffold0061 (1 HSPs)
scaffold0061 (460-569)||(45776-45885)
[»] scaffold0020 (1 HSPs)
scaffold0020 (460-561)||(1220-1321)
[»] scaffold0017 (1 HSPs)
scaffold0017 (460-569)||(152902-153011)
[»] scaffold0045 (1 HSPs)
scaffold0045 (466-561)||(83065-83161)
[»] scaffold0012 (1 HSPs)
scaffold0012 (466-561)||(166086-166182)
[»] scaffold0057 (1 HSPs)
scaffold0057 (466-555)||(35639-35729)
[»] scaffold0018 (1 HSPs)
scaffold0018 (461-549)||(171711-171798)


Alignment Details
Target: chr6 (Bit Score: 1219; Significance: 0; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 1219; E-Value: 0
Query Start/End: Original strand, 48 - 1359
Target Start/End: Original strand, 22702948 - 22704259
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22702948 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22703047  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703048 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22703147  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  22703148 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattg 22703247  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  22703248 agtggtctacgtaccatattagagtggttttttgaaacttttcgaaaaccatattgaggtgttattctcgagtgatttctgacagtgcagcctttaatcg 22703347  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22703348 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgac 22703447  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactactgaataggatgagggacgccggagatgag 647  Q
     |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  22703448 ataatcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaacactaccgaataggatgagggacgccggaggtgag 22703547  T
Q  648 gtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagtgttggatttgaggaaaagcgaaaaccgaggtgtggttt 747  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703548 gtgatgcggaggctgcgcctcgtcgcaccaccaccatttggatctacatcgtgatgaatagtgttggatttgaggaaaagcgaaaaccgaggtgtggttt 22703647  T
Q  748 tagagagagaacaaaggttttagtttagaaacggtggtgcagaaacaagctaggaaagtttatgattactcaaccgataaagatggaattgaaacggcgg 847  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703648 tagagagagaacaaaggtttttgtttagaaacggtggtgcagaaacaagctaggaaagtttatgattactcaaccgataaagatggaattgaaacggcgg 22703747  T
Q  848 tattagggcaccactccttattgaaaatcttctaaaacacacaatattcatttaaaatattatattttcacaaatttgaatgaccttaaaattataacta 947  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703748 tattagggcaccactccttattgaaaatcttctaaaacacacaatattcatttaaaatattatattttcacaaatttgaatgaccttaaaattataacta 22703847  T
Q  948 atactgcagaacacacgctgcagggtcatacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagat 1047  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703848 atactgcagaacacacgctgcagggccatacatgaaatggtgaagtagtgactacaatatgcttaaaaaacagtacgtatttctcagattctcaatagat 22703947  T
Q  1048 gtgcggaatatggtattaaaacctcacattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataa 1147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703948 gtgcggaatatggtattaaaacctcacattctaacatggaaatagaaaaaaccacattaagaataatcattttattactcgtgaaatatcttgaagataa 22704047  T
Q  1148 cacttatatctcatgatatcttaaagtacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaacta 1247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704048 cacttatatctcatgatatcttaaagtacttgtaaaagtcattttataatctaaccaactttggtaactagttatacaatctaaccaagtttagtaacta 22704147  T
Q  1248 gtttcaacttcaataaaagggctaaccttgtcaatcttatccttctgctcaggagcataacaaaaccattttcattatcaaaaacagaagcatcttcaag 1347  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22704148 gtttcaacttcaataaaagggctaaccttgtcaatcttatccttcttctcaggagcataacaaaaccattttcattatcaaaaacagaagcatcttcaag 22704247  T
Q  1348 ttttaatgatat 1359  Q
    ||||||||||||    
T  22704248 ttttaatgatat 22704259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 48 - 607
Target Start/End: Complemental strand, 21402254 - 21401709
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402254 ggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21402155  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  21402154 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaaaaac 21402055  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    | |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21402054 taagaatcgaatactcttctttggttttctctcctctcttctccctcctgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21401955  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21401954 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21401855  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| |               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21401854 tacagttag--------------aatcctggagacggcgcggttgctagtctaccttccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21401769  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 607  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  21401768 ctggtcgtgactcatcccggtaatagtttcaaagctctatcgtaattttcaaattacaaa 21401709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Original strand, 29490812 - 29491385
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29490812 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 29490911  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcggg--aata----gtattc-ttcact 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    ||||    || ||  ||||||    
T  29490912 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag-tggtttaaatactcagttttggttcact 29491010  T
Q  241 ccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttgg 340  Q
    ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  29491011 ccaaaactgagaatcaaatactcttctctgattttatctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttttttcctccttctttgg 29491110  T
Q  341 tttatcgagtggtctacgtaccatattagagtggtttt-tcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcc 439  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491111 tttatcgagtggtctacgtaccatattagagtggttttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcc 29491210  T
Q  440 tttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 539  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491211 tttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag 29491310  T
Q  540 aaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  29491311 aaagcgacttggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacacaaacaaca 29491385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 277 - 607
Target Start/End: Complemental strand, 21396983 - 21396653
Alignment:
Q  277 tctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 376  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396983 tctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtt 21396884  T
Q  377 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcct 476  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  21396883 tttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcct 21396784  T
Q  477 ggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagttt 576  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396783 ggagatggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagttt 21396684  T
Q  577 caaagctctgtcgtaattttcaaattacaaa 607  Q
    |||||||||||||||||||||||||||||||    
T  21396683 caaagctctgtcgtaattttcaaattacaaa 21396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 206 - 607
Target Start/End: Complemental strand, 34376270 - 34375873
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34376175  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  ||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||    
T  34376174 tgttgacgaaccgttcttttcttcctccctctttggtttctcgagtggtctgcgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactga 34376076  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  34376075 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctaatctacgtt 34375976  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  34375975 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccgataatagtttcaaaactccgtcgtaattttcaaattac 34375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 24191126 - 24191531
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24191221  T
Q  305 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24191222 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24191320  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||||    
T  24191321 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttactagtctacct 24191420  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 602  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24191421 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24191519  T
Q  603 acaaatacaaca 614  Q
    ||||| ||||||    
T  24191520 acaaaaacaaca 24191531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 24192223 - 24192628
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 24192318  T
Q  305 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  24192319 tgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 24192417  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  24192418 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 24192517  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttca-aagctctgtcgtaattttcaaatt 602  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  24192518 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagcttcataagctctgtcgtaa-tttcaaatt 24192616  T
Q  603 acaaatacaaca 614  Q
     |||| ||||||    
T  24192617 tcaaaaacaaca 24192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 218 - 596
Target Start/End: Complemental strand, 34142418 - 34142041
Alignment:
Q  218 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 316  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34142323  T
Q  317 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 415  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34142322 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34142226  T
Q  416 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 515  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34142225 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34142126  T
Q  516 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc----aaagctctgtcgtaatttt 596  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    | |||||||||||||||||    
T  34142125 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34142041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 218 - 596
Target Start/End: Complemental strand, 34155034 - 34154657
Alignment:
Q  218 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 316  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    ||||| ||||||||||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttgtgttgacgaacc 34154939  T
Q  317 gttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 415  Q
    ||||||| ||| |||||||||||||||| |||||| |||| || ||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  34154938 gttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaa--ttttcgaaa-ccatactgaggtgttattct 34154842  T
Q  416 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 515  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34154841 cgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgg 34154742  T
Q  516 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc----aaagctctgtcgtaatttt 596  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    | |||||||||||||||||    
T  34154741 gtagagccacgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaacagtttcatatatagctctgtcgtaatttt 34154657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 31981904 - 31981528
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 31981809  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 403  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  31981808 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 31981720  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||| |||||||||||||||||||||||||||||||||||||    
T  31981719 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctggcctgttttatcctggagacggcgcggttgctagtctac 31981620  T
Q  502 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  31981619 cttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaa---tttcgaagctctgtcgtaatttt 31981528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 2817901 - 2818277
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| ||||||||||||||   |||||| ||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2817901 tataaatagagagctcgggaatgagattctttactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2817996  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2817997 tgttgacgaaccgttcttttcttcctccttgtttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2818085  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2818086 ggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgagctgttttatcctggagacggcgcggtttctagtctacctt 2818185  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  2818186 gcacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtcgtgattcacctcggtaatagtttcaaagctctgtcgtaatttt 2818277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 48 - 323
Target Start/End: Original strand, 22697772 - 22698044
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697772 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22697871  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697872 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22697971  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  22697972 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 22698044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 22698172 - 22698386
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  22698172 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 22698271  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  22698272 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 22698371  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  22698372 ttttcaaattacaaa 22698386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 2817401 - 2817548
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817401 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 2817500  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2817501 aattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 34142928 - 34142781
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34142928 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34142829  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34142828 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 34155544 - 34155397
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34155544 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34155445  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34155444 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 19478251 - 19478138
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19478251 atctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19478152  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  19478151 ctcaacccggtaat 19478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 461 - 571
Target Start/End: Original strand, 13605087 - 13605197
Alignment:
Q  461 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 560  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctagtcgtgactc 13605186  T
Q  561 accccggtaat 571  Q
    | |||||||||    
T  13605187 aacccggtaat 13605197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 6727777 - 6727924
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  6727777 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 6727876  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6727877 aattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 34376611 - 34376464
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  34376611 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 34376512  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34376511 aattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 24190654 - 24190802
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24190654 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24190753  T
Q  148 aattgaaaa-ttttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24190754 aattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 31983622 - 31983475
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||| ||||||||||||||    
T  31983622 ggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaagtgtg 31983523  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31983522 aattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 334 - 454
Target Start/End: Original strand, 6728285 - 6728394
Alignment:
Q  334 tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagt 433  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||           |||| ||||||||||||||||||||||||||||||||    
T  6728285 tctttggtttctcgagtggtctacgtgccatattagactggtttttcgaaac-----------catactgaggtgttattctcgagcgatttctggcagt 6728373  T
Q  434 gcagcctttaatcgtacagtt 454  Q
    |||||||||||||||||||||    
T  6728374 gcagcctttaatcgtacagtt 6728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 460 - 572
Target Start/End: Complemental strand, 10642811 - 10642698
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||||||||| | || ||||||| ||||||||||||||||||||||| | ||||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgac 10642712  T
Q  559 tcaccccggtaata 572  Q
    ||| ||||||||||    
T  10642711 tcaacccggtaata 10642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 468 - 571
Target Start/End: Complemental strand, 3902006 - 3901902
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 566  Q
    ||||||||||||| ||||||||||| || |||||||||||||| ||| | ||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacccg 3901907  T
Q  567 gtaat 571  Q
    |||||    
T  3901906 gtaat 3901902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 464 - 561
Target Start/End: Original strand, 12182998 - 12183096
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||| |||||| || |||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 12183096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 465 - 561
Target Start/End: Original strand, 5600971 - 5601068
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||| ||||| ||||||||||| || |||||||| ||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 528 - 601
Target Start/End: Original strand, 6728397 - 6728472
Alignment:
Q  528 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 601  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||| ||||    
T  6728397 aacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctatcgtaatttttaaat 6728472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 461 - 571
Target Start/End: Original strand, 17281558 - 17281669
Alignment:
Q  461 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||||||  || ||  ||||||| ||||||||||| ||||| |  || ||||||||||||||||||||||||||||||| || ||||||||    
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcgacatgctcgtgact 17281657  T
Q  560 caccccggtaat 571  Q
    || |||||||||    
T  17281658 caacccggtaat 17281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 31476007 - 31476120
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||||||||||| ||||| ||||  |||||||| ||||||  ||||||||| |||| ||||||||  ||| ||||| ||||||    
T  31476007 atctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaagtgagcaacctgatcgtga 31476106  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  31476107 ctcaacccgataat 31476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 31495833 - 31495946
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31495833 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31495932  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  31495933 ctcaacccgataat 31495946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 31501219 - 31501332
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31501219 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31501318  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  31501319 ctcaacccgataat 31501332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 29325639 - 29325525
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 556  Q
    ||||||||| ||||||| ||||| || | | |||| ||||||||||||||||| ||||||||||| ||  |||||||||||| | |||||| || |||||    
T  29325639 atctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaaaagagcgacttgatcgtg 29325540  T
Q  557 actcaccccggtaat 571  Q
    ||||| |||||||||    
T  29325539 actcaacccggtaat 29325525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 11570749 - 11570845
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||| ||||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 11570845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22699741 - 22699784
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22699741 cactaagaatggtatttttgttgggaaagggtacgccactgatg 22699784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 458 - 561
Target Start/End: Original strand, 31515723 - 31515826
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||| ||||| || ||| |||||||||| |||| | ||||||  ||| ||||| ||||||    
T  31515723 atctaggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaagtgagcaacctgatcgtga 31515822  T
Q  558 ctca 561  Q
    ||||    
T  31515823 ctca 31515826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 468 - 571
Target Start/End: Original strand, 5740792 - 5740896
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 566  Q
    ||||||||| | | ||||||||||| ||||| ||||||||||| |||  |||||| || ||||||||||||||| || ||||| ||| ||||||| ||||    
T  5740792 ttttatcctagtggcggcgcggttgatagtccaccttgcacaaacttgagtagtgtcgtgaaacgtcttaaagagagtgacctagtcatgactcaacccg 5740891  T
Q  567 gtaat 571  Q
    |||||    
T  5740892 gtaat 5740896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12406353 - 12406449
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| || || ||||| | ||| |||||| ||||||||||||| ||| | |||| ||||||||||| |||| ||||||||||||||||||||    
T  12406353 tgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactca 12406449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 541
Target Start/End: Original strand, 17964559 - 17964635
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaa 541  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || || ||||||| |||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagaa 17964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 24589164 - 24589260
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||| || ||  |||| | |||||||| ||||||| ||||| ||| ||||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactca 24589260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 33687603 - 33687699
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||||||  ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||| || |||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactca 33687699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 6728193 - 6728246
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaat 259  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaat 6728246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 2700106 - 2700202
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||  ||||| ||||| ||||||  ||||||||| || |   |||||| |||||||||||||||| ||||| ||||||||||||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 2700202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 6407860 - 6407956
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| | ||| |||| || ||  |||||| ||||||||||| |||| ||||||||| ||||||||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactca 6407956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 12689066 - 12688970
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||  || || |||  | | |||||||||||||| || ||||||||| |||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactca 12688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Complemental strand, 11428085 - 11428042
Alignment:
Q  518 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  11428085 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 11428042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 465 - 561
Target Start/End: Original strand, 6112972 - 6113068
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||| || | |||||  ||||||||||||||||| || ||||| || || ||  ||||||||||||||| ||||| ||||||||||    
T  6112972 ctgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaagaaagcaacctgatcgtgactca 6113068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 8747877 - 8747781
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| |||||  |||| ||| ||  ||||||||| || ||  |||| | || ||||||||||||| ||||||||||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactca 8747781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 13736678 - 13736774
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| | | | ||||| |||||| ||||||||||  ||||| |||||| ||||||||| |||||| || |||||||| | ||||||    
T  13736678 tgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactca 13736774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 21309126 - 21309030
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| | ||||||||  || || ||||||  ||||||||||||||| |||||  |||| ||||||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactca 21309030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 466 - 540
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaaga 540  Q
    ||||||||||||||| ||||| ||||| |||||| ||||| ||||  || || |||||| ||||||||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 531 - 569
Target Start/End: Original strand, 12662673 - 12662711
Alignment:
Q  531 gtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  12662673 gtcttaaagaaagcgacctggttgtgactcaacccggta 12662711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 526 - 571
Target Start/End: Original strand, 11956762 - 11956807
Alignment:
Q  526 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 571  Q
    ||||||||||||||| |||||||||||| ||||||| |||| ||||    
T  11956762 gaaacgtcttaaagagagcgacctggtcatgactcaacccgataat 11956807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 526; Significance: 0; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Original strand, 8984987 - 8985553
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984987 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8985086  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985087 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 8985186  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8985187 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8985286  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985287 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8985386  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985387 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8985486  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8985487 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaacacaaca 8985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Complemental strand, 13701023 - 13700457
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13701023 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 13700924  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700923 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 13700824  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13700823 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 13700724  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700723 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 13700624  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700623 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 13700524  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13700523 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 13700457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Original strand, 8979867 - 8980433
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979867 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8979966  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8979967 aattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactccaaaac 8980066  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8980067 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 8980166  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980167 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 8980266  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980267 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 8980366  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8980367 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 8980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 518; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Original strand, 21299415 - 21299981
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21299415 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtg 21299514  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21299515 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaac 21299614  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21299615 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21299714  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299715 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 21299814  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299815 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 21299914  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21299915 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 21299981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 48 - 607
Target Start/End: Original strand, 21304535 - 21305094
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304535 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21304634  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304635 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 21304734  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21304735 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 21304834  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21304835 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcaacctttaatcg 21304934  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21304935 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgac 21305034  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21305035 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 21305094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Complemental strand, 54991989 - 54991433
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991989 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 54991890  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  54991889 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttcaaaac 54991790  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54991789 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttcttttctccttctttggtttatcg 54991690  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    |||||| ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991689 agtggtttacgtaccatattagagtggtttttc----------gaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 54991600  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991599 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 54991500  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  54991499 ctggtcgtgactcaccccggtaatagtttcaaagctttgtcgtaattttcaaattacaaaaacaaca 54991433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 206 - 614
Target Start/End: Complemental strand, 41393584 - 41393192
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 305  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || ||| ||||| ||    ||||| |    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccc-ctcatctccatc----ggtttgt 41393490  T
Q  306 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 405  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||           |||||||||    
T  41393489 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgaaccatattagagtggtttttcgaaac-----------catattgag 41393401  T
Q  406 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41393400 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttg 41393301  T
Q  506 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393300 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 41393201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 196 - 614
Target Start/End: Original strand, 51019117 - 51019521
Alignment:
Q  196 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 294  Q
    ||||||||  ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 51019216  T
Q  295 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 394  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||             
T  51019217 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac--------- 51019303  T
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
      |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  51019304 --catattgaagtgttattctcgagcgatttctggcaatgcagcatttaatcgtacagttagaatctgggatgttttatcctggagacggcgcggttgct 51019401  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51019402 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 51019501  T
Q  595 ttcaaattacaaatacaaca 614  Q
    |||||||||||||| |||||    
T  51019502 ttcaaattacaaattcaaca 51019521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 206 - 601
Target Start/End: Complemental strand, 53797970 - 53797589
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 53797875  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    ||||||||||| |||||||  |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||           ||||||||    
T  53797874 tgttgacgaactgttcttttcttcctccttctttggttttttgagtggtctacgtgccatattagagtggtttttcgaaac-----------catattga 53797786  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  53797785 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 53797686  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 601  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  53797685 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 53797589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 48 - 342
Target Start/End: Original strand, 54990392 - 54990686
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    ||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54990392 ggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtg 54990491  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  54990492 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactccaaaac 54990591  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtt 342  Q
    |||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54990592 tgagaatcaaatactcttctcttgttttctctcctctctactccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtt 54990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 206 - 612
Target Start/End: Original strand, 9763771 - 9764167
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 305  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| |||  ||  ||||||||||| |    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccct-tctcatc--tcccgcggtttgt 9763867  T
Q  306 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggttttt-cgaaacttttcgaaaaccatattga 404  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| ||       |||||||||||||||| ||||||||||||||| |||||||||    
T  9763868 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtata-------tattagagtggttttttcgaaacttttcgaaa-ccatattga 9763959  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  9763960 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctagagacggtgcggttgttagtctacctt 9764059  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    ||||||||||||||||||| |||||| |||||||| | |||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||    
T  9764060 gcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtcgtgactctccctggtaatagtttcaaacctccgtcgtaattttcaaattac 9764159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 13711010 - 13710634
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13710915  T
Q  305 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13710914 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13710826  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13710825 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13710726  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  13710725 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcga-ctggtcgtgactcaccccggtaatattttcgaagctccgtcgtaatttt 13710634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 13695503 - 13695124
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 13695408  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 403  Q
    ||||||| |||| ||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  13695407 tgttgacaaaccattcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 13695319  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctac 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   | |||| |||||||||||||||||||||||||||||||||||||||    
T  13695318 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctaggctgttttatcctggagacggcgcggttgctagtctac 13695219  T
Q  502 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||    
T  13695218 cttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcaccccggtaatattttcgaagctccctcgtaatttt 13695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 47046060 - 47046438
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||  |||| |||||||||||| ||| ||| ||||||||  |    ||     
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctggttttctccccttctcatctccctcagg----ttg 47046155  T
Q  305 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    ||||||||||||||||||| ||| ||||| |||||||||| ||| ||||||| ||| |||||||||||||||||| ||||||||||||||| ||||| ||    
T  47046156 tgttgacgaaccgttcttttcttccctccctctttggtttctcgggtggtctgcgtgccatattagagtggtttt-cgaaacttttcgaaa-ccatactg 47046253  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    |||||||||||||||||||||||||||||||         ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  47046254 aggtgttattctcgagcgatttctggcagtg---------atcgtacagtttgaatctgagctgttttatcctggagacggcgcggttgctagtctacct 47046344  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||| ||||    
T  47046345 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaattgttccaaaagctctgtcgtattttt 47046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 39999609 - 39999363
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999609 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 39999510  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39999509 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 39999410  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  39999409 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 39999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 40004567 - 40004321
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004567 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40004468  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40004467 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 40004368  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  40004367 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 40004321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 54343743 - 54343497
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343743 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54343644  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54343643 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54343544  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54343543 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 54348897 - 54348651
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348897 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54348798  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54348797 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54348698  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  54348697 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 54348651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 181; E-Value: 4e-97
Query Start/End: Original strand, 74 - 278
Target Start/End: Complemental strand, 36359868 - 36359664
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36359868 cttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36359769  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36359768 ggtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36359669  T
Q  274 ttctc 278  Q
    |||||    
T  36359668 ttctc 36359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 179; E-Value: 6e-96
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 36354682 - 36354436
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354682 cttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36354583  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36354582 ggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36354483  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36354482 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36354436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 395 - 614
Target Start/End: Complemental strand, 36359460 - 36359239
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36359460 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36359361  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa-gctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||  ||||| |    
T  36359360 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaggctccatcgtata 36359261  T
Q  593 ttttcaaattacaaatacaaca 614  Q
    ||||||||||||||| ||||||    
T  36359260 ttttcaaattacaaaaacaaca 36359239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 54348523 - 54348309
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  54348523 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 54348424  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  54348423 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54348324  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  54348323 ttttcaaattacaaa 54348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 394 - 614
Target Start/End: Complemental strand, 36354343 - 36354121
Alignment:
Q  394 aaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgc 493  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  36354343 aaccatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgc 36354244  T
Q  494 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa-gctctgtcgta- 591  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||  |||||     
T  36354243 tagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccgataatagtttcaaaggctccatcgtat 36354144  T
Q  592 attttcaaattacaaatacaaca 614  Q
    ||||| |||||||||| ||||||    
T  36354143 atttttaaattacaaaaacaaca 36354121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 40004193 - 40003979
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  40004193 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 40004094  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  40004093 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 40003994  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  40003993 ttttcaaattacaaa 40003979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 147; E-Value: 8e-77
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 39999235 - 39999021
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  39999235 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 39999136  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  39999135 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 39999036  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  39999035 ttttcaaattacaaa 39999021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 147; E-Value: 8e-77
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 54343369 - 54343155
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  54343369 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctgtagacggcgcggttgct 54343270  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  54343269 agtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 54343170  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  54343169 ttttcaaattacaaa 54343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 53798450 - 53798329
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  53798450 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattg 53798351  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  53798350 ggtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 41394005 - 41393858
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41394005 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaagtgtg 41393906  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  41393905 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 653146 - 653035
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  653146 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 653047  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  653046 ctcatcccggta 653035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 51018732 - 51018853
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||| |||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  51018732 cttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 51018831  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  51018832 ggtagatcacacactctagtag 51018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 9763273 - 9763420
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  9763273 ggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagcatg 9763372  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  9763373 aattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 13695904 - 13695757
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13695904 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13695805  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13695804 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 13711517 - 13711370
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13711517 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13711418  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13711417 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 10120801 - 10120914
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  10120801 atctgggctattttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 10120900  T
Q  558 ctcaccccggtaat 571  Q
    |||| || ||||||    
T  10120901 ctcaacctggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 4207188 - 4207042
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||| ||||| |||| ||||||||||||||||||||    
T  4207188 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaa-cacaatgatgtagaaactagtgtaaagtgtg 4207090  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4207089 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 622 - 748
Target Start/End: Original strand, 12889052 - 12889179
Alignment:
Q  622 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 720  Q
    |||||||||||||| |||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  12889052 ataggatgagggacaccggaggtgaggtgatgcggaggcctcgcctcgtcgcaccaccaccatttggatctacatcgtgatggatagtggttggatttga 12889151  T
Q  721 ggaaaagcgaaaaccgaggtgtggtttt 748  Q
    || |||| | |||||  | |||||||||    
T  12889152 gggaaaggggaaaccacgatgtggtttt 12889179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 47045647 - 47045767
Alignment:
Q  75 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 174  Q
    |||||||||||||||   | || |||| | || |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||| ||    
T  47045647 ttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 47045746  T
Q  175 gtagatcacacactctagtag 195  Q
     ||||||||||||||||||||    
T  47045747 atagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 458 - 559
Target Start/End: Original strand, 8083019 - 8083121
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 556  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||| | |||||||| ||||||||||||||| ||||||||| |||||    
T  8083019 atctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtg 8083118  T
Q  557 act 559  Q
    |||    
T  8083119 act 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 461 - 570
Target Start/End: Complemental strand, 24490132 - 24490022
Alignment:
Q  461 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||| |||   ||||| |||||||||||||||||| ||||| ||||||||||||    
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgact 24490033  T
Q  560 caccccggtaa 570  Q
    || ||||||||    
T  24490032 caacccggtaa 24490022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 37259877 - 37259973
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactca 37259973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 31269129 - 31269033
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 464 - 572
Target Start/End: Complemental strand, 34644655 - 34644546
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 562  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||||  | || ||||| ||||||||||||||||||||||||| || ||||||||||     
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaa 34644556  T
Q  563 cccggtaata 572  Q
    ||||||||||    
T  34644555 cccggtaata 34644546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 5271419 - 5271515
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 5271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 13521992 - 13522088
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 13522088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 31273616 - 31273520
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31273520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 33463356 - 33463452
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| |||||  | ||| ||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 33463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 37264564 - 37264660
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 37264660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 487 - 571
Target Start/End: Complemental strand, 39319706 - 39319621
Alignment:
Q  487 cggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 571  Q
    |||||| |||||||||||||||||  | | |||||| || ||||||||||||||||||||||||| |||||||||| |||||||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctgatcgtgactcaacccggtaat 39319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 31765981 - 31765885
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| |||||||||||||||| || |||||||| ||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactca 31765885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 441 - 570
Target Start/End: Original strand, 5928194 - 5928324
Alignment:
Q  441 ttaatcgtacagttggcatctgggct-gttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaa 538  Q
    ||||||| ||||||| || ||||||| |||||||||||||| ||| | ||||| |||||| |||||||||| || | | |||||| | |||| |||||||    
T  5928194 ttaatcgaacagttg-cagctgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaa 5928292  T
Q  539 gaaagcgacctggtcgtgactcaccccggtaa 570  Q
    || |||||||||||||||||||| || |||||    
T  5928293 gagagcgacctggtcgtgactcaacctggtaa 5928324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13699110 - 13699067
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13699110 cactaagaatggtatttttgttgggaaagggtacgccactgatg 13699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21301328 - 21301371
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21301328 cactaagaatggtatttttgttgggaaagggtacgccactgatg 21301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36357913 - 36357870
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36357913 cactaagaatggtatttttgttgggaaagggtacgccactgatg 36357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40002841 - 40002798
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40002841 cactaagaatggtatttttgttgggaaagggtacgccactgatg 40002798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54346975 - 54346932
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54346975 cactaagaatggtatttttgttgggaaagggtacgccactgatg 54346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 466 - 571
Target Start/End: Original strand, 10318779 - 10318885
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    |||| |||||| ||| ||||||||||| ||||||||||||||||| ||| | ||    ||||||| |||||||||| |||||| ||||||||||||| ||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaacc 10318878  T
Q  565 cggtaat 571  Q
    |||||||    
T  10318879 cggtaat 10318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 460 - 572
Target Start/End: Complemental strand, 17359633 - 17359525
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||| ||||| |||||||||  ||||| |||| |||||||||||| |||| ||  |||||||||| |||||||||||||||||||||     |||||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcga-----tcgtgac 17359539  T
Q  559 tcaccccggtaata 572  Q
    ||| ||||||||||    
T  17359538 tcaacccggtaata 17359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 8693806 - 8693710
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||| ||||| ||||| |||| |  ||||||||| || || ||| ||| |||||||||||||||| ||||||||||||||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8693710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 16421124 - 16421028
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||| || ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| ||||||| || ||||||||||||||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactca 16421028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 464 - 555
Target Start/End: Original strand, 30564412 - 30564504
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 555  Q
    ||||||||||||| ||| |||| |  ||| ||||||||||||||||| || || |||||||||||||||||||| ||| |||||||| |||||    
T  30564412 gctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcgacctagtcgt 30564504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8981780 - 8981823
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  8981780 cactaagaatggtatttttgttgggaaagggtacgccattgatg 8981823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13702988 - 13702945
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  13702988 cactaagaatggtacttttgttgggaaagggtacgccactgatg 13702945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 559
Target Start/End: Original strand, 31729387 - 31729481
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||||| ||||| | ||| | |||| |||||||||| || || ||||||| |||||||||||||||| ||||||||| || |||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 54990687 - 54990732
Alignment:
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgta 449  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  54990687 aggtgttattctcgagcaatttctggtagtgcagcctttaatcgta 54990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 2819939 - 2819843
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||  ||||  ||| | ||||||||||||||||| || ||  ||| || |||||| ||||||||||| ||||||||||||||||||    
T  2819939 tgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactca 2819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12823895 - 12823991
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| || ||  |||||| ||||| |||||||||| |||||||||||| |||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactca 12823991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 494 - 569
Target Start/End: Complemental strand, 34560565 - 34560489
Alignment:
Q  494 tagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||||||||||||| || || || |||||||| ||   ||||||||||||||||||||||||||||||| |||||||    
T  34560565 tagtctaccttgcataatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacccggta 34560489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 55251814 - 55251719
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||  |||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||| | ||||||||||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 55251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 561
Target Start/End: Original strand, 42758756 - 42758851
Alignment:
Q  467 gttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||| |||||| || || ||||| ||||||  ||||||||| || ||  |||||| |||||| ||||||||| ||||||||||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 42758851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 3998051 - 3998152
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||| ||||||||||||||| |  | |||||| |||||||| |||||||| || || |||||||| ||    |||||||||||||||||||||||||||    
T  3998051 ctgggttgttttatcctggaggca-cacggttgttagtctactttgcacaatttcgggtagtgccgtgatttatcttaaagaaagcgacctggtcgtgac 3998149  T
Q  559 tca 561  Q
    |||    
T  3998150 tca 3998152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 33468973 - 33469069
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| |||||  |||| |||||  ||||| ||||||||||||| ||  |||||| | |||||||||||||| | |||||| |||||||||||    
T  33468973 tgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactca 33469069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 805 - 861
Target Start/End: Original strand, 54221327 - 54221382
Alignment:
Q  805 gtttatgattactcaaccgataaagatggaattgaaacggcggtattagggcaccac 861  Q
    ||||||||| ||||||| |||||| ||| | ||||||||||||||||||||||||||    
T  54221327 gtttatgataactcaactgataaa-atgcatttgaaacggcggtattagggcaccac 54221382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 466 - 559
Target Start/End: Complemental strand, 19102072 - 19101978
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||||| || || ||||| ||||||   |||||||| || | |||||||| |||||||||||||| | || ||||| |||||||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgact 19101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 465 - 550
Target Start/End: Original strand, 31298384 - 31298469
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctg 550  Q
    |||||||||||||||| || | | |||| |||||||||||||||||  | | |||||| |  |||||||||||||||||||||||||    
T  31298384 ctgttttatcctggaggcg-cacagttgttagtctaccttgcacaaactcgagtagtgtcatgaaacgtcttaaagaaagcgacctg 31298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 466 - 550
Target Start/End: Original strand, 8030476 - 8030561
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 550  Q
    ||||||||||||||| | |||  |||| ||||||| |||||||||  || || |||||| | |||||||||||||| |||||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctg 8030561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 514; Significance: 0; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 514; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Complemental strand, 17510571 - 17510005
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510571 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 17510472  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510471 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 17510372  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17510371 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 17510272  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510271 agtggtctacgtaccatattagagtggtttttcgaaattttttgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 17510172  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510171 tacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 17510072  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  17510071 ctggtcgtgactcaccccggtaatggtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 17510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 48 - 607
Target Start/End: Complemental strand, 42020086 - 42019527
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42020086 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaatgtg 42019987  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019986 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 42019887  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42019886 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccattctttctttcctccttctttggtttatcg 42019787  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019786 agtggtttacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 42019687  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019686 tacagttagaatctgggctgttttatcctggagacggcacggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 42019587  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42019586 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaaatacaaa 42019527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Complemental strand, 17505440 - 17504900
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  17505440 cttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcg 17505341  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17505340 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 17505241  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505240 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 17505141  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17505140 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagggatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 17505041  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17505040 cctggagacgacgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactcaccccggtaatag 17504941  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  17504940 tttcaaagctctgtcataattttcaaattacaaaaacaaca 17504900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Complemental strand, 41859071 - 41858541
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41859071 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41858972  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41858971 ggtagatcacac--tctagtagaaattctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 41858874  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||| ||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  41858873 ttctcttctctcttc-------cgcggtttgtgttgacgaaccgttctttctttcctcattctttggtttatcgagtggtctacataccatattagagtg 41858781  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  41858780 gttttttgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 41858681  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  41858680 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctgatcgtgactca-cccggtaatag 41858582  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41858581 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41858541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 74 - 484
Target Start/End: Complemental strand, 43580147 - 43579737
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580147 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 43580048  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| ||    
T  43580047 ggtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtatttttcacaccaaaactgagaatcgaatactcttctctgatt 43579948  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43579947 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttattgagtggtctacgtaccatattagagtg 43579848  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  43579847 gtttttcgaaacttttcgaaaactatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 43579748  T
Q  474 cctggagacgg 484  Q
    |||||||||||    
T  43579747 cctggagacgg 43579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 267 - 614
Target Start/End: Complemental strand, 41853842 - 41853496
Alignment:
Q  267 tctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 366  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853842 tctggttttctctgctctcttctccctcccgcggtttgttttaacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatat 41853743  T
Q  367 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggct 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  41853742 tagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgtagcctttaatcgtacagttagaatctgggct 41853643  T
Q  467 gttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 566  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  41853642 gttttatcgtagagacggcgcggttgctagtctactttgcacaacttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactca-cccg 41853544  T
Q  567 gtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41853543 gtaatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 41853496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 206 - 615
Target Start/End: Complemental strand, 36254177 - 36253772
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttat 305  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||| |||  ||  |||| | |||| |    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctagttttctc-cctttctcatc--tccctcagtttgt 36254081  T
Q  306 gttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgag 405  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36254080 gttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaacttttcgaaa-ccatattgag 36253982  T
Q  406 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 505  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36253981 gtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaggcggcgcggttgctagtctaccttg 36253882  T
Q  506 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36253881 cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattaca 36253782  T
Q  606 aatacaacac 615  Q
    || |||||||    
T  36253781 aaaacaacac 36253772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 1413806 - 1414200
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 1413901  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||           ||||||||    
T  1413902 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgc-taccatattagagtggtttttcgaaac-----------catattga 1413989  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||| |||||||||||||||||||||||||||||    
T  1413990 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgagttgttttatcttggagacggcgcggttgctagtctacctt 1414089  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-ttttcaaatta 603  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  1414090 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccagtaatagtttcaaagctttgtcgtaatttttcaaatta 1414189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 244; E-Value: 1e-134
Query Start/End: Original strand, 48 - 348
Target Start/End: Complemental strand, 42024866 - 42024566
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  42024866 ggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaatgtg 42024767  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42024766 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaat 42024667  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||    
T  42024666 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaatcgttctttctttcctccttctttggtttttcg 42024567  T
Q  348 a 348  Q
    |    
T  42024566 a 42024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 206 - 607
Target Start/End: Complemental strand, 26709444 - 26709056
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26709349  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26709348 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26709261  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26709260 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26709161  T
Q  505 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 602  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26709160 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26709061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 206 - 607
Target Start/End: Complemental strand, 26979178 - 26978790
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 26979083  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||| ||||| ||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  26979082 tgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaac-----------catattga 26978995  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  26978994 ggtgttattctcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctacctt 26978895  T
Q  505 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 602  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26978894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 26978795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 24776563 - 24776945
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 24776658  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 403  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  24776659 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 24776747  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 498  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  24776748 aggtgttattctcgagcgatttctggcagtgaatcctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 24776847  T
Q  499 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  24776848 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 24776945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 24771108 - 24771487
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||  |||||| || |||||| |||||||||||| ||| ||| ||||||||    |||||     
T  24771108 tataaatagagagctcaggattggtattctttactccaaaaccaagaatcaaacactcttctctggttttctccccttctcatctccctc----ggtttg 24771203  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| | ||| | |||| |||| |||||||||||||||||  |         || ||||    
T  24771204 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcgatctgcataccgtatttgagtggtttttcgaaaccgt---------at-ttga 24771293  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgcggttgctagtctacc 502  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||   | ||||||| ||||||||||||||||||||||||||| |||||||||    
T  24771294 ggtgttattctcgagcgatttctagcagtgtagcctttaatcgtacagttttagaatctgggttgttttatcctggagacggcgcggttgttagtctacc 24771393  T
Q  503 ttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  24771394 ttgcacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtcgtgactcatcccggtaatattttcgaagctctgtcgtaatttt 24771487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 41853956 - 41853846
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41853956 cttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41853857  T
Q  174 ggtagatcaca 184  Q
    |||||||||||    
T  41853856 ggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 1413100 - 1413220
Alignment:
Q  75 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 174  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  1413100 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattga 1413199  T
Q  175 gtagatcacacactctagtag 195  Q
    |||||||||||||||||||||    
T  1413200 gtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 569
Target Start/End: Original strand, 13582682 - 13582793
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  13582682 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 13582781  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  13582782 ctcatcccggta 13582793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 14374238 - 14374127
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14374238 atctgggctgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 14374139  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  14374138 ctcaacccggta 14374127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 569
Target Start/End: Original strand, 24435861 - 24435972
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  24435861 atctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 24435960  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  24435961 ctcatcccggta 24435972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 36254638 - 36254517
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  36254638 cttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattg 36254539  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  36254538 ggtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 458 - 566
Target Start/End: Complemental strand, 7805174 - 7805066
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  7805174 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtcgtga 7805075  T
Q  558 ctcaccccg 566  Q
    |||| ||||    
T  7805074 ctcaacccg 7805066  T

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Target: chr5; HSP #21
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 24770605 - 24770752
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24770605 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24770704  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24770705 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

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Target: chr5; HSP #22
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 26709804 - 26709688
Alignment:
Q  79 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 178  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26709804 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26709705  T
Q  179 atcacacactctagtag 195  Q
    || ||||| | ||||||    
T  26709704 attacacattgtagtag 26709688  T

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Target: chr5; HSP #23
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 79 - 195
Target Start/End: Complemental strand, 26979538 - 26979422
Alignment:
Q  79 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 178  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26979538 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26979439  T
Q  179 atcacacactctagtag 195  Q
    || ||||| | ||||||    
T  26979438 attacacattgtagtag 26979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 24776116 - 24776206
Alignment:
Q  105 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776116 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 614 - 749
Target Start/End: Complemental strand, 36607173 - 36607037
Alignment:
Q  614 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagt-gtt 712  Q
    ||||| |||||||||||||||||||| || ||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||| |||    
T  36607173 actaccgaataggatgagggacgccgaaggtgaggtgatgcggaggccgcacctcgtcgcaccaccaccaattggatctacatcgtgatgaatagtggtt 36607074  T
Q  713 ggatttgaggaaaagcgaaaaccgaggtgtggtttta 749  Q
    | |||||||| |||| ||| ||   ||||||||||||    
T  36607073 gaatttgagggaaagggaatacgacggtgtggtttta 36607037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 466 - 572
Target Start/End: Complemental strand, 28857958 - 28857850
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaa-gaaagcgacctggtcgtgactcacc 563  Q
    |||||||||||| || ||||| ||||| | ||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaaagaaagcgacttggtcgtgactcaac 28857859  T
Q  564 ccggtaata 572  Q
    |||||||||    
T  28857858 ccggtaata 28857850  T

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Target: chr5; HSP #27
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 37248795 - 37248891
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 37248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 26667367 - 26667271
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 26938964 - 26938868
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 26938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 29167973 - 29168069
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 29168069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 36428867 - 36428708
Alignment:
Q  403 gaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggct-gttttatcctggagacggcgcggttgctagtctac 501  Q
    ||||||| |||||||||||||||    ||||||||   ||||||| |||||||  | ||||||| |||||||||||||| ||||| ||||| |||||| |    
T  36428867 gaggtgtaattctcgagcgattttctacagtgcagtagttaatcgaacagttgt-agctgggcttgttttatcctggaggcggcgtggttgatagtctgc 36428769  T
Q  502 cttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| || ||  ||| |||| |||||||||||||| ||||||||||||||||||||    
T  36428768 cttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgactca 36428708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 556790 - 556694
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 561562 - 561466
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 7451853 - 7451757
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| | ||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7451757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 12103120 - 12103024
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||||||||||| |||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactca 12103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 36423732 - 36423636
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| || ||  ||||||||||||||||||||||| ||||||||||||| ||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactca 36423636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 36937511 - 36937607
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36937607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 36942265 - 36942361
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 36942361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 460 - 569
Target Start/End: Original strand, 21323960 - 21324069
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||| ||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtcatgac 21324058  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  21324059 tcaacccggta 21324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 460 - 569
Target Start/End: Complemental strand, 31731644 - 31731535
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||  ||   ||||||||||||||||||||||||||||    
T  31731644 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaagaaagcgacctggtcgtgac 31731546  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  31731545 tcaacccggta 31731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 466 - 579
Target Start/End: Complemental strand, 31986822 - 31986708
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    |||||||||||| || ||||||  ||| || ||||||||||| || ||  ||||||| |||||||||||||||||||||||||||  |||||||||| ||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacc 31986723  T
Q  565 cggtaatagtttcaa 579  Q
    || ||||| ||||||    
T  31986722 cgataatattttcaa 31986708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 462 - 561
Target Start/End: Original strand, 13301482 - 13301581
Alignment:
Q  462 gggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 560  Q
    ||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactc 13301580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 675 - 770
Target Start/End: Complemental strand, 27631472 - 27631376
Alignment:
Q  675 ccaccaccatttggatctacatcgtgatgaatagt-gttggatttgaggaaaagcgaaaaccgaggtgtggttttagagagagaacaaaggttttag 770  Q
    ||||||| |||||||| |||||||||||||||||| ||||||||||||| |||| ||||||    ||||||||||| |||||| ||| |||||||||    
T  27631472 ccaccacaatttggatttacatcgtgatgaatagtggttggatttgagggaaagggaaaacaatagtgtggttttacagagaggacagaggttttag 27631376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 32461549 - 32461645
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 32461645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 39518505 - 39518409
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtag-tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39518409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 39523144 - 39523048
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtag-tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 42001529 - 42001433
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| ||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 42001433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17508673 - 17508630
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17508673 cactaagaatggtatttttgttgggaaagggtacgccactgatg 17508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41857192 - 41857149
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41857192 cactaagaatggtatttttgttgggaaagggtacgccactgatg 41857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42023585 - 42023542
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42023585 cactaagaatggtatttttgttgggaaagggtacgccactgatg 42023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 6514601 - 6514697
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || || ||  |||||| |||||||||||||||| || ||| |||||||||||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactca 6514697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 10759820 - 10759915
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| | |||||||||||| | ||||||||||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactca 10759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12045139 - 12045235
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||| | ||||||  ||||||||| || ||  |||||| ||||||||||||||||  |||||||||||||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 12045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12501899 - 12501995
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  |||||| |||||||||||||||| |||||||||||| |||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactca 12501995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 41996760 - 41996664
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| ||||| || ||  |||||| |||||||||||||||| ||| ||||||||||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 41996664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24772852 - 24772895
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  24772852 cactaagaatggtatttttgttgggaaaaggtacgccactgatg 24772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 3666027 - 3665931
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| |||  |||| ||||| |||||| |||||||||| || ||  |||||| ||||||||||| |||| |||||||| |||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactca 3665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12041932 - 12042028
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||| |  || ||  |||||| |||||||||||||||| | ||||||||||||||||||    
T  12041932 tgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 12042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12102831 - 12102927
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| ||||| | ||||| |||||| |||||||||| || ||  |||||| | ||| |||||||||| |||||||| |||||||||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactca 12102927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 40147988 - 40147894
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| |||||| ||||||||| ||||||||| || |||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactca 40147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 6155419 - 6155515
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||| | ||||| ||||||  |||| | || || ||  |||||| |||||||||||||||| ||||||||| ||||||||||    
T  6155419 tgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactca 6155515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 470 - 561
Target Start/End: Original strand, 25689296 - 25689388
Alignment:
Q  470 ttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||| || ||| |||||||| ||||| |||||||| || || |  |||||||||||||| ||||||||||| |||  |||||||||||||    
T  25689296 ttatcctagatacgacgcggttgatagtcgaccttgcataaatttgaatagtgccgcgaaacatcttaaagaaaacgatatggtcgtgactca 25689388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 20181118 - 20181159
Alignment:
Q  520 tgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||| |||||||||||||||| || |||||||||||||||||    
T  20181118 tgccacgaaacgtcttaaagagagtgacctggtcgtgactca 20181159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 509; Significance: 0; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Complemental strand, 4050 - 3510
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4050 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 3951  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3950 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3851  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3850 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 3751  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  3750 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 3651  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3650 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 3551  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  3550 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2163 - 2120
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  2163 cactaagaatggtatttttgttgggaaagggtacgccactgatg 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 507; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 74 - 616
Target Start/End: Original strand, 37409145 - 37409687
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409145 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37409244  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37409245 ggtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37409344  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37409345 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtg 37409444  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37409445 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37409544  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409545 cctggaaacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37409644  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaacact 616  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  37409645 tttcaaagctctgtcgtaattttcaaattacaaaaacaacact 37409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Original strand, 37404026 - 37404564
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404026 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37404125  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37404126 ggtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37404225  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404226 ttctctcctctcttctccctcccg--gtttgtgttgacgaaccgttatttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 37404323  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37404324 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttat 37404423  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404424 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 37404523  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37404524 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 37404564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Complemental strand, 27716930 - 27716390
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27716930 cttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcg 27716831  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27716830 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgataatcgaatactcttatctggtt 27716731  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716730 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 27716631  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  27716630 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 27716531  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716530 cctggagacgacgctgttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 27716431  T
Q  574 tttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  27716430 tttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27716390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 74 - 581
Target Start/End: Original strand, 11250731 - 11251228
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250731 cttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 11250830  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  11250831 gttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactccaaaattgagaatcgaatactcttctctggtt 11250930  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11250931 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtatcatattagagtg 11251030  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    ||          ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||||||||||    
T  11251031 gt----------ttttcgaaaaccatattgaggtgttattctcgagcgattactggcagtgcagtctttaatcgtacagttagaatctgggctgttttat 11251120  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251121 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 11251220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 48 - 546
Target Start/End: Complemental strand, 27711836 - 27711319
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711836 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 27711737  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711736 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 27711637  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27711636 tgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 27711537  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711536 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 27711437  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttg-------------------ctagtctaccttgcacaacttaggtagtgccgcgaa 528  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||                   ||||||||||||||||||||||||||||||||||||    
T  27711436 tacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaa 27711337  T
Q  529 acgtcttaaagaaagcga 546  Q
    ||||||||||||||||||    
T  27711336 acgtcttaaagaaagcga 27711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 206 - 601
Target Start/End: Complemental strand, 5730446 - 5730065
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 5730351  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||           ||||||||    
T  5730350 tgttgacgaaccgttcttttattcctccttctttggtttctcgagtggtctgtgtaccatattagagtggtttttcgaaac-----------catattga 5730262  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5730261 ggtgttattctcgagcgatttttggcagtgtagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggtgcggttgctagtctacctt 5730162  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 601  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5730161 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 5730065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 3584942 - 3584566
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3584847  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  3584846 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 3584758  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  3584757 ggtgttattgtcgagcgatttatggtagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 3584658  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3584657 gcacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 3584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 321 - 614
Target Start/End: Original strand, 11387666 - 11387978
Alignment:
Q  321 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387666 tttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagc 11387765  T
Q  421 gatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcct-------------------ggagacggcgcggttgctagtctac 501  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||                   |||||||||||||||||||||||||    
T  11387766 gatttctgccagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctac 11387865  T
Q  502 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 601  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  11387866 cttgcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccgataatagtttcaaagctctgttgtaattttcaaat 11387965  T
Q  602 tacaaatacaaca 614  Q
    |||||| ||||||    
T  11387966 tacaaaaacaaca 11387978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 207; E-Value: 1e-112
Query Start/End: Original strand, 196 - 614
Target Start/End: Original strand, 48246427 - 48246823
Alignment:
Q  196 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 294  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 48246526  T
Q  295 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 394  Q
        ||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||             
T  48246527 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttaccgagtggtctacgtaccatataagagtggttttttgaaac--------- 48246613  T
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
      ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  48246614 --catattgaggtgttattctcgagcgatttctggcaatgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 48246711  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |   ||||||||||||||||||||||||||||||||||| |||||| |    
T  48246712 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaag-------ctctgtcgtgactcaccccggtaatagtttcaaagctctatcgtaa-t 48246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 74 - 277
Target Start/End: Original strand, 34317840 - 34318043
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317840 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 34317939  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34317940 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 34318039  T
Q  274 ttct 277  Q
    ||||    
T  34318040 ttct 34318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Original strand, 36684270 - 36684516
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684270 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36684369  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36684370 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaaaactgagaatcgaatactcttctctggtt 36684469  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  36684470 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 36684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 192; E-Value: 1e-103
Query Start/End: Original strand, 308 - 601
Target Start/End: Complemental strand, 5725221 - 5724939
Alignment:
Q  308 tgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggt 407  Q
    ||||||||| ||||||  ||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||           |||||||||||    
T  5725221 tgacgaaccattcttttcttccttcttctttggtttctcgagtggcctgcgtaccatattagagtggtttttcgaaac-----------catattgaggt 5725133  T
Q  408 gttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5725132 gttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttgca 5725033  T
Q  508 caacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 601  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||    
T  5725032 caatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacctcgataataatttcaaagctctgtcgtaattttaaaat 5724939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 36684644 - 36684858
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  36684644 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36684743  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  36684744 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 36684843  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  36684844 ttttcaaattacaaa 36684858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 402 - 613
Target Start/End: Original strand, 34318160 - 34318373
Alignment:
Q  402 tgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctac 501  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||||||||||||||||||||||||    
T  34318160 tgaggtgtcattttcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatttgggctgttttatcctggagacggcgcggttgctagtctac 34318259  T
Q  502 cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-attttcaa 599  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||||  ||||| ||||||||    
T  34318260 cttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaa 34318359  T
Q  600 attacaaatacaac 613  Q
    |||||||| |||||    
T  34318360 attacaaaaacaac 34318373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 9e-58
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 5725512 - 5725365
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725512 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 5725413  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5725412 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 6e-53
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 3585448 - 3585301
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3585448 ggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaaatgtg 3585349  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3585348 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 5e-50
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 5730917 - 5730771
Alignment:
Q  49 gaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 148  Q
    ||||||||||||||||||        |||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5730917 gaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 5730818  T
Q  149 attgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5730817 attgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 10106206 - 10106095
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  10106206 atctgggttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 10106107  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  10106106 ctcaacccggta 10106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 39747157 - 39747270
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  39747157 atctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtcgtga 39747256  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  39747257 ctcaacccgataat 39747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 48245998 - 48246119
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  48245998 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattg 48246097  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  48246098 ggtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 13890916 - 13890805
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  13890916 atctgggctgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtcgtga 13890817  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  13890816 ctcaacccggta 13890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 38734378 - 38734265
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  38734378 atctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 38734279  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  38734278 ctcaacccgataat 38734265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 460 - 571
Target Start/End: Original strand, 26651160 - 26651271
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||| ||||||||| || |||||||||||||||    
T  26651160 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtcgtgact 26651259  T
Q  560 caccccggtaat 571  Q
    || |||| ||||    
T  26651260 caacccgataat 26651271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 5602417 - 5602530
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| ||||| ||||||||||    
T  5602417 atctggactgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtcgtga 5602516  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  5602517 ctcaacccggtaat 5602530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 14582202 - 14582089
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||| |||| |    
T  14582202 atctggactgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctgatcgtaa 14582103  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  14582102 ctcaacccgataat 14582089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 50959010 - 50959069
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaac 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50959010 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 10135551 - 10135455
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||| ||||| ||||| | |||| |||||||||| || |||||||||| |||||||||||||||| ||||||||||||||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 19422866 - 19422983
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctac----cttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 553  Q
    ||||||||| |||||||||||||| ||||  |||| ||||||||    |||||||||||| |||||||| ||||||||||||||||| ||||| ||| ||    
T  19422866 atctgggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcgatctgatc 19422965  T
Q  554 gtgactcaccccggtaat 571  Q
    |||||||| ||| |||||    
T  19422966 gtgactcaacccagtaat 19422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 569
Target Start/End: Original strand, 41097946 - 41098055
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  41097946 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 41098044  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  41098045 tcaacccggta 41098055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 51041463 - 51041557
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || || |||||| |||||||||||||| | ||||||||||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 51041557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 19799013 - 19799109
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || || ||||||| |||||||||||||||| ||||| ||| ||||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 19799109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 23192817 - 23192913
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||  |||| ||||| |||||| ||||| |||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23192913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 25188272 - 25188368
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| |||||||| | |||||| ||||||||||||||| |||| | ||||||||||||||| |||| |||||||| ||||| | ||||||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagcaacctgatagtgactca 25188368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27715043 - 27715000
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27715043 cactaagaatggtatttttgttgggaaagggtacgccactgatg 27715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 33055139 - 33055038
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| || | |||||| ||||||||||||||||| ||  |||||||||| ||   ||||||||||||||||| |||| |||||    
T  33055139 ctgggctgttttatcctggaggcg-cacggttgatagtctaccttgcacaaactcgggtagtgccgtgattagtcttaaagaaagcgacatggttgtgac 33055041  T
Q  559 tca 561  Q
    |||    
T  33055040 tca 33055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 16035703 - 16035607
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  |||||| |||||||| |||||||  |||||||||||||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactca 16035607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 16649613 - 16649708
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||| |||| ||||| ||||| ||||||| ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactca 16649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 557
Target Start/End: Original strand, 33301180 - 33301272
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| | ||||||||||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtga 33301272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 40166075 - 40165979
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||| |||||  |||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 40165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 47451225 - 47451321
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactta-ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| ||  || ||||||  ||||||||||||||| ||||||||||||||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 47451321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 47455386 - 47455482
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  | |||| |||||||||||||||| ||||||||||||||||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactca 47455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 573 - 614
Target Start/End: Complemental strand, 27711315 - 27711274
Alignment:
Q  573 gtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  27711315 gtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 27711274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 8267891 - 8267931
Alignment:
Q  526 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccg 566  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  8267891 gaaacgtcttaaagaaagcgacctggtcgtgactcaacccg 8267931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 10140184 - 10140088
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| |||  |||| ||||| | |||| |||||||||| || | |||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactca 10140088  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Complemental strand, 25855213 - 25855170
Alignment:
Q  518 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  25855213 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 25855170  T

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Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37405911 - 37405954
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||| || |||||||||||||||||||||||||||||    
T  37405911 cactaagaatgataattttgttgggaaagggtacgccactgatg 37405954  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 488 - 561
Target Start/End: Complemental strand, 3094187 - 3094113
Alignment:
Q  488 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3094113  T

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Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 498 - 561
Target Start/End: Original strand, 4632958 - 4633022
Alignment:
Q  498 ctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| || || ||||||||| |||||||||||||| |||||| | |||||||||||    
T  4632958 ctaccttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactca 4633022  T

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Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5728718 - 5728674
Alignment:
Q  1 cactaagaatggtattttt-gttgggaaagggtacgccactgatg 44  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  5728718 cactaagaatgatattttttgttgggaaagggtacgccactgatg 5728674  T

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Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 12260091 - 12259995
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||  |||||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| |||||||| ||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctca 12259995  T

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Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 644 - 696
Target Start/End: Complemental strand, 17032033 - 17031981
Alignment:
Q  644 tgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacat 696  Q
    ||||||| |||||||||||| ||||||||| |||||||||||  |||||||||    
T  17032033 tgaggtggtgcggaggctgctcctcgtcgcaccaccaccattaagatctacat 17031981  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 469 - 559
Target Start/End: Original strand, 39588370 - 39588461
Alignment:
Q  469 tttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||||||||  |||| ||| | ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||| ||||||||    
T  39588370 tttatcctggagtaggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 39588461  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 528 - 561
Target Start/End: Complemental strand, 16832133 - 16832100
Alignment:
Q  528 aacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| ||||||||||||||||||||    
T  16832133 aacgtcttaaagagagcgacctggtcgtgactca 16832100  T

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Target: chr3 (Bit Score: 506; Significance: 0; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 81 - 614
Target Start/End: Complemental strand, 17369199 - 17368666
Alignment:
Q  81 tatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 180  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369199 tatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 17369100  T
Q  181 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctc 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17369099 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttttctctc 17369000  T
Q  281 ctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 380  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368999 ctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttc 17368900  T
Q  381 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggag 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  17368899 gaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggag 17368800  T
Q  481 acggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368799 acggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaa 17368700  T
Q  581 gctctgtcgtaattttcaaattacaaatacaaca 614  Q
    ||||||||||||||||||||||||||| ||||||    
T  17368699 gctctgtcgtaattttcaaattacaaaaacaaca 17368666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 74 - 607
Target Start/End: Complemental strand, 55129276 - 55128743
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129276 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 55129178  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55129177 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 55129078  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55129077 ttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacataccatattagagtg 55128978  T
Q  374 gtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttat 473  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  55128977 gtttttcgaaacttttcgaaaaccatgttgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttgaaatctgggctgttttat 55128878  T
Q  474 cctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatag 573  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| |    
T  55128877 cctggagacggcgcggttgctagtctaccttacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtcgtgactca-cccgataattg 55128779  T
Q  574 tttcaaa--gctctgtcgtaattttcaaattacaaa 607  Q
    |||||||  |||||||||||||||||||||||||||    
T  55128778 tttcaaaaggctctgtcgtaattttcaaattacaaa 55128743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 54270986 - 54270609
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 54270891  T
Q  305 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |  |||||||||||||||||||||           ||||||||||||    
T  54270890 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctgcaaaccatattagagtggtttttc-----------aaaaccatattg 54270802  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||    
T  54270801 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgaactgttttatcctggagacggcgcggttgctagtctacct 54270702  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54270701 tgcacaacttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 54270609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 34128923 - 34129299
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| ||||| |||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 34129018  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  34129019 tgttgacgaaccgttcttttcttcatccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 34129107  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  34129108 ggtgttattctcgagcgatttctggtggtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 34129207  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34129208 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcagcccggtaatagtttcaaagctctgtcgtaatttt 34129299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 4117345 - 4117730
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 4117440  T
Q  305 tgttgacgaaccgttcttt-ctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||  ||||||||| ||||| ||    
T  4117441 tgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctatgaaccatattacagtggtttttcgaa--ttttcgaaa-ccatactg 4117537  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  4117538 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacagcgcggttgctagtctacct 4117637  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  4117638 tgcacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtcgtgactcaccccagtaatattttcgaagctccgtcgtaatttt 4117730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 206 - 601
Target Start/End: Original strand, 3482166 - 3482560
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||| ||||||||    |||||     
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctc----ggtttg 3482261  T
Q  305 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    |||||||||||||||||||  |||||||| | ||||| || || |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  3482262 tgttgacgaaccgttcttttcttcctcctctatttggattctcaagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaa-ccatactg 3482360  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3482361 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3482460  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 601  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||  ||| ||||||||||||||| ||||    
T  3482461 tgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtcgtgactcactccgataattgtttcaaaaaactctgtcgtaatttttaaat 3482560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 17358179 - 17357801
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 17358084  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  17358083 tgttgacgaaccgttcttttcttcttccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 17357995  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17357994 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 17357895  T
Q  505 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |  ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17357894 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtcgtgactcacctcggtaatagtttcaaagctttgtcgtaatttt 17357801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 206 - 601
Target Start/End: Original strand, 3476699 - 3477083
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||   |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 3476794  T
Q  305 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  3476795 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 3476883  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3476884 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3476983  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3476984 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 3477083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 206 - 607
Target Start/End: Complemental strand, 10321784 - 10321396
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||| |||| ||||| || ||||||||| ||| ||| ||||||||    |||||     
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctcaggttttctccccttctcatctccctc----ggtttg 10321689  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  10321688 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 10321600  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgctagtctacct 503  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||  |||||||||||||||||||    
T  10321599 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatggaatctgggctgtttttattctggagacaacgcggttgctagtctacct 10321500  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatta 603  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||||     
T  10321499 tgcacaatttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactgatcctggtaataatttcaaagctctgtcgtaattttcaaattc 10321400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 48 - 323
Target Start/End: Original strand, 20090191 - 20090463
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20090191 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20090290  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090291 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20090390  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20090391 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20090463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 48 - 323
Target Start/End: Original strand, 20095316 - 20095588
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20095316 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20095415  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095416 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20095515  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  20095516 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 20095588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Original strand, 15762585 - 15762831
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762585 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15762684  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15762685 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15762784  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15762785 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15762831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Original strand, 15767746 - 15767992
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767746 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15767845  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15767846 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15767945  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  15767946 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 15767992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 395 - 614
Target Start/End: Original strand, 30341773 - 30341993
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||    
T  30341773 accatattgaggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggtgcggttgct 30341872  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 594  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30341873 agtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtcgtgactcaccccgataatactttcaaagctctgtcgtaatt 30341972  T
Q  595 tt-caaattacaaatacaaca 614  Q
    || |||||| |||| ||||||    
T  30341973 ttccaaattccaaaaacaaca 30341993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 603
Target Start/End: Original strand, 20090591 - 20090801
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20090591 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20090690  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  20090691 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20090790  T
Q  593 ttttcaaatta 603  Q
    |||||||||||    
T  20090791 ttttcaaatta 20090801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 603
Target Start/End: Original strand, 20095716 - 20095926
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  20095716 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20095815  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  20095816 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 20095915  T
Q  593 ttttcaaatta 603  Q
    |||||||||||    
T  20095916 ttttcaaatta 20095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 147; E-Value: 8e-77
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 15762959 - 15763173
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15762959 accatatcgaggtgtaattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15763058  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  15763059 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 15763158  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  15763159 ttttcaaattacaaa 15763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 15768120 - 15768334
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  15768120 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15768219  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||   ||||| |    
T  15768220 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccagtaatagtttcaaaagcttcatcgtata 15768319  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  15768320 ttttcaaattacaaa 15768334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 126; E-Value: 3e-64
Query Start/End: Original strand, 458 - 596
Target Start/End: Complemental strand, 17364168 - 17364028
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 555  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 17364069  T
Q  556 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17364068 gactcaccccggtaatagtttcaaagctctgtcgtaatttt 17364028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 123; E-Value: 2e-62
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 3481649 - 3481796
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481649 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 3481748  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3481749 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 34128437 - 34128558
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34128437 cttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 34128536  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  34128537 ggtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 17358686 - 17358566
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  17358686 cttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattg 17358588  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  17358587 ggtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 30338126 - 30338247
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  30338126 cttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattg 30338225  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  30338226 ggtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 30341204 - 30341351
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341204 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 30341303  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30341304 aattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 54271433 - 54271312
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  54271433 cttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattg 54271334  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  54271333 ggtagatcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 13022130 - 13022017
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  13022130 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtcgtga 13022031  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  13022030 ctcaacccgataat 13022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 5e-38
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 33089335 - 33089448
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  33089335 atctgagctgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33089434  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  33089435 ctcaacccggtaat 33089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 3476249 - 3476339
Alignment:
Q  105 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3476249 ttggaatgtaaacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 4117007 - 4117097
Alignment:
Q  105 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4117007 ttggaatgtaaacacaatgatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 38436983 - 38437096
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||| ||||||||||||||||||| |||||| ||||||    
T  38436983 atctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtga 38437082  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  38437083 ctcaacccggtaat 38437096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 53119630 - 53119517
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||||||    
T  53119630 atctggcctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctgatcgtga 53119531  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  53119530 ctcaacccggtaat 53119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 20810475 - 20810362
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| | ||||||||||||||    
T  20810475 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtcgtga 20810376  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  20810375 ctcaacccgataat 20810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 7e-31
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 26962162 - 26962049
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||  |||||||| |||||||||||||||| ||||| ||||||||||    
T  26962162 atctgtgctgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtcgtga 26962063  T
Q  558 ctcaccccggtaat 571  Q
    |||| ||| |||||    
T  26962062 ctcaacccagtaat 26962049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 6e-28
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 2617255 - 2617363
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacc 563  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||||| |||| |||||||| |    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggttgtgactcaac 2617354  T
Q  564 ccggtaata 572  Q
    || ||||||    
T  2617355 cctgtaata 2617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 464 - 561
Target Start/End: Original strand, 21494300 - 21494398
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||| || || || || ||||||||| ||||||||||||||||||||    
T  21494300 gctgttttatcccggagacggcgcggttgttagtctaccttgcacaaacttgggtactgtcgtgatacatcttaaagagagcgacctggtcgtgactca 21494398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 758368 - 758464
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || || ||||||| |||||||||||||||| ||||| ||||||||||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 23666123 - 23666219
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23666219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 24038371 - 24038467
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 39775728 - 39775824
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 39775824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 8069772 - 8069677
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || |  |||||| |||||||||||||||| ||||||||||||||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 8069677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 569
Target Start/End: Original strand, 10586177 - 10586286
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  10586177 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 10586275  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  10586276 tcaacccggta 10586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 3672679 - 3672583
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 3692711 - 3692615
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 14438695 - 14438791
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| || || ||||||| ||||||||||||||||  |||||||||||||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactca 14438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 18467318 - 18467222
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18467222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 20520147 - 20520051
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| || |||||||||||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactca 20520051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 49971424 - 49971520
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| | ||| |||||| |||||||||| || || ||||||| |||||||||||||||| | ||||||||||||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactca 49971520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 482 - 559
Target Start/End: Original strand, 1688902 - 1688980
Alignment:
Q  482 cggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    ||||||| ||| || |||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  1688902 cggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtcgtgact 1688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 464 - 572
Target Start/End: Original strand, 27605133 - 27605242
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 562  Q
    ||||||||||||| ||| ||| |  |||| ||||||||||||||||| ||  |||||||| |||||| |||||||||| |||||| |||||||||||||     
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcacaaactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtcgtgactcaa 27605232  T
Q  563 cccggtaata 572  Q
    || |||||||    
T  27605233 cctggtaata 27605242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 30338506 - 30338595
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 294  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| || |||| ||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 30338595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 7571218 - 7571314
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| | ||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7571314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3478442 - 3478485
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3478442 cactaagaatggtatttttgttgggaaagggtacgccactgatg 3478485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 466 - 560
Target Start/End: Complemental strand, 8883263 - 8883168
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 560  Q
    ||||||||||||||| | ||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| |||||||||||||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactc 8883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15764514 - 15764557
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15764514 cactaagaatggtatttttgttgggaaagggtacgccactgatg 15764557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17362677 - 17362634
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17362677 cactaagaatggtatttttgttgggaaagggtacgccactgatg 17362634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17367319 - 17367276
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17367319 cactaagaatggtatttttgttgggaaagggtacgccactgatg 17367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20092145 - 20092188
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20092145 cactaagaatggtatttttgttgggaaagggtacgccactgatg 20092188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 515 - 561
Target Start/End: Original strand, 25726843 - 25726889
Alignment:
Q  515 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25726843 ggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 25726889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 460 - 568
Target Start/End: Original strand, 795399 - 795508
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgca-caacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||  ||||  || |||| || | ||||||||| | ||||||  |||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgcataaactctggcagtgtcgtgcaacgtcttacataaagcggtctggtcgtgac 795498  T
Q  559 tcaccccggt 568  Q
    ||| ||||||    
T  795499 tcaacccggt 795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 3033737 - 3033641
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||| ||| | ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 3033641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 3419088 - 3418992
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||| ||  |||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactca 3418992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 557
Target Start/End: Original strand, 12112641 - 12112733
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||| ||| | ||||| ||||||  |||||||||||| ||  |||||| |||||||||||||||| |||||||| |||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtga 12112733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 18472100 - 18472005
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  ||||| |||||| || ||| || |||||| ||||||||||||||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtcgtgactca 18472005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 29350333 - 29350237
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||  ||| | | |||| |||||||||| || ||  |||||| ||||||||||||||||||||||| |||||||||||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactca 29350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 468 - 536
Target Start/End: Complemental strand, 26706877 - 26706808
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtctta 536  Q
    ||||||||||||| |||||| |||| ||||||||||||||| ||||| | |||||| |||||||||||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaacgtctta 26706808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 32474680 - 32474774
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||  || || |||||| |||||||||||  ||| ||||||||||||||| ||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggctca 32474774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 675 - 727
Target Start/End: Original strand, 49359194 - 49359247
Alignment:
Q  675 ccaccaccatttggatctacatcgtgatgaatagt-gttggatttgaggaaaag 727  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  49359194 ccaccaccatttggatctacatcgtgataaatagtggttggatttgagggaaag 49359247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 8888023 - 8887927
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  |||||  | |||||||||||||| ||||||||||||||||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactca 8887927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 12965873 - 12965969
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  ||||||   |||||||||||||| ||||||||||| ||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactca 12965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 487 - 569
Target Start/End: Complemental strand, 31002771 - 31002689
Alignment:
Q  487 cggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||| ||||||||||| |||||||    
T  31002771 cggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacct-gtcgtgactcaacccggta 31002689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 459 - 569
Target Start/End: Original strand, 45904442 - 45904552
Alignment:
Q  459 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||| || |  | |||||| ||||||||||||||||| || || |||||| | ||   |||||||||||| |||| |||||||||    
T  45904442 tctgggctgttttatcctgaaggca-cacggttgttagtctaccttgcacaatttcgggtagtgctgtgatttgtcttaaagaaaacgacatggtcgtga 45904540  T
Q  558 ctcaccccggta 569  Q
    |||| |||||||    
T  45904541 ctcaacccggta 45904552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 509 - 571
Target Start/End: Complemental strand, 6024171 - 6024109
Alignment:
Q  509 aacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaat 571  Q
    |||||||||||||||||||||||||||||| | || ||||||||| ||| ||| ||| |||||    
T  6024171 aacttaggtagtgccgcgaaacgtcttaaaaagagagacctggtcatgaatcaacccagtaat 6024109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 471 - 544
Target Start/End: Original strand, 25023929 - 25024003
Alignment:
Q  471 tatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagc 544  Q
    |||||||||| |||| |||||| ||||||||||||||| |||| |||||||| || ||||||||| || ||||||    
T  25023929 tatcctggaggcggcacggttgttagtctaccttgcacaaactgaggtagtgtcgtgaaacgtctcaaggaaagc 25024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 466 - 534
Target Start/End: Original strand, 1741109 - 1741178
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtct 534  Q
    ||||||||||||||| ||||||||||| || | | |||||||| |||| |||||||| ||||||||||||    
T  1741109 tgttttatcctggaggcggcgcggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 29715737 - 29715641
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||| ||||| ||||| |||||| ||| |||||| || ||  |||| | |||||||||||||| | ||||| ||||||||||||||    
T  29715737 tgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactca 29715641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 518 - 561
Target Start/End: Complemental strand, 27708918 - 27708875
Alignment:
Q  518 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||| |||||||||||||||| | ||||||||||||||||||    
T  27708918 agtgccacgaaacgtcttaaagagaacgacctggtcgtgactca 27708875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 30341720 - 30341771
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcga 257  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||||||    
T  30341720 tataaatagagagctcgggattgggattcttcactccaaaaccgagaatcga 30341771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 526 - 561
Target Start/End: Complemental strand, 53358277 - 53358242
Alignment:
Q  526 gaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||||||||||||| |||||||||    
T  53358277 gaaacgtcttaaagaaagcgacctggccgtgactca 53358242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 10321861 - 10321816
Alignment:
Q  231 attcttcactccaaaactgagaatcgaatactcttatctggttttc 276  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  10321861 attcttcaccccaaaaccgagaatcgaatcctcttctctggttttc 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 466 - 507
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgca 507  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 470; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 48 - 614
Target Start/End: Complemental strand, 40392832 - 40392266
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40392832 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaagtgtg 40392733  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392732 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 40392633  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcg 347  Q
    ||||||||||||||| || |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40392632 tgagaatcgaatacttttctctgattttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttctttcctccttctttggtttatcg 40392533  T
Q  348 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392532 agtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcg 40392433  T
Q  448 tacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 547  Q
    ||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       
T  40392432 tacagttagaatttgggctgttttatcctggagacggcgtggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacagt 40392333  T
Q  548 ctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    ||||||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||| ||||||    
T  40392332 ctggtcgtgactcaccccgataatagtttcaaaattctatcgtaattttcaaattacaaaaacaaca 40392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 74 - 614
Target Start/End: Original strand, 40518075 - 40518620
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518075 cttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40518174  T
Q  174 gg-tagatcacacactctagtagaaatcctccttat----aaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatc 268  Q
    || |||||||||||||||||||||||||||||||||    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  40518175 gggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattcttcactccaaaactgagaatcgaatactcttctc 40518274  T
Q  269 tggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttctttctttcctccttcttt-ggtttatcgagtggtctacgtaccatatt 367  Q
    | ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40518275 ttgttttctctcctctcttctccctccagcggtttgtgttgacgaaccgttctttctt-cctccttcttttggtttatcgagtggtctacgtaccatatt 40518373  T
Q  368 agagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctg 467  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  40518374 agagtggtttttcgaaactttttgaaaaccatattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagttagaatctgggctg 40518473  T
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccgg 567  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518474 ttttatcctggagacggcgcggttgctagtctaccttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccgg 40518573  T
Q  568 taatagtttcaaagctctgtcgtaattttcaaattacaaatacaaca 614  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40518574 taatagtttcaaagctctgtcgtaattttcaaattacaaaaacaaca 40518620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 259; E-Value: 1e-143
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 28751483 - 28751877
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 28751578  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||           |||||||||||||    
T  28751579 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttc-----------aaaaccatattga 28751667  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  28751668 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggtgcggttgcttgtctacctt 28751767  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28751768 gcacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaattac 28751867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Original strand, 42728175 - 42728421
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728175 cttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 42728274  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42728275 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 42728374  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  42728375 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 42728421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 75 - 278
Target Start/End: Original strand, 42723007 - 42723210
Alignment:
Q  75 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723007 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42723106  T
Q  175 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42723107 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttt 42723206  T
Q  275 tctc 278  Q
    ||||    
T  42723207 tctc 42723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 44096842 - 44096596
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44096842 cttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44096743  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  44096742 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 44096643  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  44096642 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 44096596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 184; E-Value: 6e-99
Query Start/End: Original strand, 74 - 265
Target Start/End: Original strand, 44754161 - 44754352
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754161 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44754260  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754261 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 180; E-Value: 2e-96
Query Start/End: Original strand, 74 - 265
Target Start/End: Original strand, 44759327 - 44759518
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44759327 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44759426  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759427 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44759518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 6e-90
Query Start/End: Original strand, 77 - 265
Target Start/End: Complemental strand, 40520122 - 40519929
Alignment:
Q  77 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-ggg 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40520122 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggg 40520023  T
Q  176 tagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 265  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520022 tagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 40519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 42723380 - 42723594
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42723380 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42723479  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  42723480 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42723579  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  42723580 ttttcaaattacaaa 42723594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 42728549 - 42728763
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  42728549 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42728648  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  42728649 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 42728748  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  42728749 ttttcaaattacaaa 42728763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 615
Target Start/End: Complemental strand, 44096468 - 44096246
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44096468 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44096369  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  44096368 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 44096269  T
Q  593 ttttcaaattacaaatacaacac 615  Q
    |||| |||||||||| |||||||    
T  44096268 tttttaaattacaaaaacaacac 44096246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 44754525 - 44754739
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44754525 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44754624  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  44754625 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44754724  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  44754725 ttttcaaattacaaa 44754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 607
Target Start/End: Original strand, 44759691 - 44759905
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  44759691 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44759790  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||   ||||| |    
T  44759791 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagcttcatcgtata 44759890  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  44759891 ttttcaaattacaaa 44759905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 4162895 - 4163042
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||| ||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4162895 ggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 4162994  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4162995 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 28751021 - 28751168
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751021 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 28751120  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  28751121 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 8e-49
Query Start/End: Original strand, 206 - 385
Target Start/End: Original strand, 4163331 - 4163507
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 4163426  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaac 385  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  4163427 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac 4163507  T

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Target: chr2; HSP #18
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 461 - 571
Target Start/End: Complemental strand, 42914742 - 42914632
Alignment:
Q  461 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactc 560  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtgactc 42914643  T
Q  561 accccggtaat 571  Q
    | |||| ||||    
T  42914642 aacccgctaat 42914632  T

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Target: chr2; HSP #19
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 463 - 561
Target Start/End: Complemental strand, 5089376 - 5089278
Alignment:
Q  463 ggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||    
T  5089376 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactca 5089278  T

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Target: chr2; HSP #20
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 622 - 748
Target Start/End: Original strand, 36594228 - 36594355
Alignment:
Q  622 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 720  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||||||| |||| |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  36594228 ataggatgagggacgacagaggtgaggtgttgcggaggccgcgcctcatcgcaccaccatcatttggatctacatcgtgattaatagtggttggatttga 36594327  T
Q  721 ggaaaagcgaaaaccgaggtgtggtttt 748  Q
    ||||||| |||||| | |||||||||||    
T  36594328 ggaaaagggaaaacggcggtgtggtttt 36594355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 30658358 - 30658262
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || | |||||||| |||||||||||||||| ||||||||||||||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 30658262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 9180724 - 9180820
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9180820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 10160724 - 10160820
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 10160820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 1934993 - 1935089
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 1935089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 9189803 - 9189899
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||| ||||||||||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactca 9189899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 18344526 - 18344430
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 18344430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 11658882 - 11658984
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    |||| |||||||||| ||||| ||| || |||| ||||||||||||||||| || | ||||||||| |||| ||||||||||||||||| ||||| ||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggtcatgac 11658981  T
Q  559 tca 561  Q
    |||    
T  11658982 tca 11658984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 489 - 569
Target Start/End: Complemental strand, 19538458 - 19538377
Alignment:
Q  489 gttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||| |||||||||||||||||  | || |||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtcgtgactcaacccggta 19538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 569
Target Start/End: Original strand, 6297886 - 6297989
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    ||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||||| ||    
T  6297886 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgactcaacc 6297984  T
Q  565 cggta 569  Q
    |||||    
T  6297985 cggta 6297989  T

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Target: chr2; HSP #30
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 30651024 - 30650928
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||| ||||||||||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 30650928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42724943 - 42724986
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42724943 cactaagaatggtatttttgttgggaaagggtacgccactgatg 42724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44756095 - 44756138
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44756095 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44756138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 489 - 569
Target Start/End: Complemental strand, 28855077 - 28854996
Alignment:
Q  489 gttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||| |||||||||||| |||| ||| | |||||||| ||||||||||||||||||||||| ||| |||||||| |||||||    
T  28855077 gttgttagtctaccttgtacaaacttggatagtgccgtgaaacgtcttaaagaaagcgaccgggttgtgactcaacccggta 28854996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 12797020 - 12796924
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||||||| ||||| ||||||  |||| |||| || ||  |||||| | |||||||||||||| ||||| ||||||||||||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 12796924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 19578414 - 19578510
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||| ||||||| | ||  ||||| |||||| |||||||||| || |||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactca 19578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 19892466 - 19892562
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactca 19892562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 25478297 - 25478393
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| ||||||||||| ||||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactca 25478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 25497325 - 25497421
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  ||||   |||||||||||||||| ||||||||||||||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactca 25497421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 31326834 - 31326738
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||||||  |||| ||||| |||||| |||||||||| || ||  |||| |  ||||||||||||||| ||||||||||||||||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactca 31326738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 563 - 602
Target Start/End: Original strand, 4163525 - 4163564
Alignment:
Q  563 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 602  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4163525 cccggtaatagtttcaaagctctgtcgtaattttcaaatt 4163564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 39543004 - 39542901
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtct-accttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||| ||||||||||||| |   ||||||| |||||| ||||| ||||| || | ||||||||| ||||||||||||||| ||||||||| ||||||    
T  39543004 ctgggctattttatcctggaggcaatgcggttgttagtcttaccttacacaaactcatgtagtgccgtgaaacgtcttaaagagagcgacctgatcgtga 39542905  T
Q  558 ctca 561  Q
    ||||    
T  39542904 ctca 39542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 29677474 - 29677380
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| ||||| ||||| |||||| | |||||||| || ||  |||||| |||||||||||||||| |||||| || ||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactca 29677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 465 - 561
Target Start/End: Complemental strand, 160137 - 160040
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||  |||| || |||||||| ||| ||||||||||||| || || ||||| || ||||||| ||||||| ||||||||||||||| ||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctca 160040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000008
Query Start/End: Original strand, 464 - 548
Target Start/End: Complemental strand, 28945266 - 28945181
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcac-aacttaggtagtgccgcgaaacgtcttaaagaaagcgacc 548  Q
    ||||||||||||||||| |  |||||||| |||| |||||||||| ||||   ||||||||||||||||||||||| ||| |||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaaaaaatcgacc 28945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 7737851 - 7737947
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| | |||| ||||||||| |||||| |||||||||||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactca 7737947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 557
Target Start/End: Complemental strand, 35602017 - 35601925
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||| ||||| ||||| || |||  ||||||||| || ||  |||||| |||||||||||||| | ||||||||||||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtga 35601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 470 - 561
Target Start/End: Original strand, 42926763 - 42926857
Alignment:
Q  470 ttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaac--gtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||| ||||| ||||| |||||||||||||||||  || || |||||| ||||||  |||||||||| |||| |||| ||||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactca 42926857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 517 - 565
Target Start/End: Complemental strand, 22844862 - 22844814
Alignment:
Q  517 tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccc 565  Q
    ||||| || |||| ||||||||||||||||| |||||||||||||||||    
T  22844862 tagtggcgtgaaatgtcttaaagaaagcgacatggtcgtgactcacccc 22844814  T

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Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 466 - 571
Target Start/End: Original strand, 29907368 - 29907470
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacccc 565  Q
    ||||||||||||||| |||||  |||| |||   ||||| ||||| ||   ||||| |||||||||||||||| | | |||||||||||||||| | |||    
T  29907368 tgttttatcctggaggcggcgtagttgatag---accttacacaattttaatagtgtcgcgaaacgtcttaaaaagatcgacctggtcgtgacttaaccc 29907464  T
Q  566 ggtaat 571  Q
    ||||||    
T  29907465 ggtaat 29907470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 470 - 571
Target Start/End: Original strand, 39542509 - 39542611
Alignment:
Q  470 ttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggt 568  Q
    ||||||||||| | |||| |||| ||||||||||| ||||| || | ||||||  | ||||||||||||||| || ||| | ||||||||||| || |||    
T  39542509 ttatcctggaggcagcgcagttgttagtctaccttacacaaattcaagtagtgttgtgaaacgtcttaaagagagtgacttagtcgtgactcaacctggt 39542608  T
Q  569 aat 571  Q
    |||    
T  39542609 aat 39542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 206 - 601
Target Start/End: Original strand, 2234384 - 2234765
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 2234479  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||           ||||||||    
T  2234480 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac-----------catattga 2234568  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  2234569 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 2234668  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaat 601  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2234669 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttaaaat 2234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 16539166 - 16539559
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16539261  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16539262 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16539350  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16539351 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16539450  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16539451 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16539549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 206 - 614
Target Start/End: Complemental strand, 16626496 - 16626103
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| |||||||||||| | | ||| ||||||||    |||||     
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctc----ggtttg 16626401  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    ||||||||||| |||||||  |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||           |||| |||    
T  16626400 tgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaac-----------catactga 16626312  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16626311 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 16626212  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16626211 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaa-cttcaaattac 16626113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 206 - 607
Target Start/End: Original strand, 21080793 - 21081182
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| | | |||||||||| |||||||||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    |||||     
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctggttttctccccttctcatcttcctc----ggtttg 21080888  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||           ||||||||    
T  21080889 tgttgacgaaccgttcttttcttcctccttctttggtttcttaagtggtctacgtaccatattagagtggttttttgaaac-----------catattga 21080977  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21080978 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggtgcggttgctagtctacctt 21081077  T
Q  505 g--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaatt 602  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21081078 gcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttttaaatt 21081177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 206 - 601
Target Start/End: Complemental strand, 42572286 - 42571904
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 42572191  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  42572190 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgaatggtttttcgaaac-----------catattga 42572102  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  42572101 ggtgttattctcgagagatttctggcagtgcagcctttaattttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 42572002  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  42572001 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 42571904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 12934738 - 12934363
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 12934643  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||| ||||||||||||  |||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||||           ||||||||    
T  12934642 tgttgatgaaccgttcttttcttcctccttctttgttttctcgagtggtctacgaaccatatttgagtggtttttcgaaac-----------catattga 12934554  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  12934553 ggtgttattctcgagagatttctggcagtgcaacctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 12934454  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12934453 gcacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtcgtgactca-cccggtaatagtttcaaagctctgtcgtaatttt 12934363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 206 - 601
Target Start/End: Complemental strand, 43893210 - 43892816
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 43893115  T
Q  305 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    |||||||||| ||||||||  |||||||  |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||  |    
T  43893114 tgttgacgaatcgttcttttcttcctcccctctttggtttctcgagtggtctacgtgccatactagagtggtttttcgaaacttttcgaaa-ccataccg 43893016  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||    
T  43893015 aggtgttattctcgagcgatttctagcagtgcaacctttaatcgtacagtaagaatctgagctgttttatcctggagacggcgcggttgctagtttacct 43892916  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 601  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||| ||||||||| ||||    
T  43892915 tgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattatttcaaaaagctctgacgtaatttttaaat 43892816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 206 - 596
Target Start/End: Complemental strand, 17495744 - 17495367
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17495744 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17495649  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17495648 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17495560  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17495559 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17495460  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17495459 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17495367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 17557470 - 17557847
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  17557470 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctc----ggtttg 17557565  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||           ||||| ||    
T  17557566 tgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaac-----------catatgga 17557654  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17557655 ggtgttattctcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctacctt 17557754  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaatttt 596  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17557755 gcacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcacctcggtaatagtttcaaaagctctgtcgtaatttt 17557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 218 - 596
Target Start/End: Original strand, 32212419 - 32212784
Alignment:
Q  218 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggtttatgttgacgaacc 316  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    ||||| |||||| |||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttgtgttgatgaacc 32212514  T
Q  317 gttctttctttcctcctt-ctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattct 415  Q
    |||||||  ||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||           ||||||||||||||||| |    
T  32212515 gttcttttcttcctcctttctttggtttctcgagtggtcttcgtaccatattggagtggtttttcgaaac-----------catattgaggtgttatttt 32212603  T
Q  416 cgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag 515  Q
    ||||||||||||||||||||| |||||||||||||||   | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  32212604 cgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaatttag 32212703  T
Q  516 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32212704 gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcataatttt 32212784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 48 - 323
Target Start/End: Complemental strand, 33238568 - 33238296
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238568 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 33238469  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238468 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33238369  T
Q  248 tgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    |||||||||||||||||| |||||||||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  33238368 tgagaatcgaatactcttctctggttttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 33238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 206 - 601
Target Start/End: Original strand, 19309365 - 19309746
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctggttttctccccttctcatctccctc----ggtttg 19309460  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||           ||||||||    
T  19309461 tgttgacgaactgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgactggtttttcgaaac-----------catattga 19309549  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
     |||||||||||||| |||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  19309550 agtgttattctcgagagatttctggcagtgcagcctttaatgttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 19309649  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgtaattttcaaat 601  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  19309650 gcacaacttaggtggtgccgcgaaacgtcttaaagacagcgacctggttg-gactcaccccggtaatagtttcaaaagctccgtcgtaattttaaaat 19309746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 47994340 - 47994094
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994340 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 47994241  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47994240 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47994141  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47994140 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47994094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 48 - 278
Target Start/End: Complemental strand, 33243745 - 33243515
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33243745 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaagtgtg 33243646  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243645 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33243546  T
Q  248 tgagaatcgaatactcttatctggttttctc 278  Q
    |||||||||||||||||| ||||||||||||    
T  33243545 tgagaatcgaatactcttctctggttttctc 33243515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 47999515 - 47999269
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999515 cttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcg 47999416  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999415 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47999316  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  47999315 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 47999269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 370 - 601
Target Start/End: Original strand, 47177024 - 47177256
Alignment:
Q  370 agtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtt 469  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||    
T  47177024 agtggtttttcgaaacttttcgaaa-ccatactgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgagctgtt 47177122  T
Q  470 ttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 569  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47177123 ttatcctgaagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggta 47177222  T
Q  570 atagtttc--aaagctctgtcgtaattttcaaat 601  Q
    || |||||  ||||||||||||||||||| ||||    
T  47177223 attgtttcaaaaagctctgtcgtaatttttaaat 47177256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 33238168 - 33237954
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33238168 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33238069  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  33238068 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33237969  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  33237968 ttttcaaattacaaa 33237954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 33243345 - 33243131
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33243345 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33243246  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  33243245 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 33243146  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  33243145 ttttcaaattacaaa 33243131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 395 - 603
Target Start/End: Complemental strand, 47999141 - 47998931
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47999141 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47999042  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  47999041 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 47998942  T
Q  593 ttttcaaatta 603  Q
    |||||||||||    
T  47998941 ttttcaaatta 47998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 149; E-Value: 5e-78
Query Start/End: Original strand, 395 - 605
Target Start/End: Complemental strand, 47993966 - 47993754
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47993966 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47993867  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||||  ||||| |    
T  47993866 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggttgtgactcatcccggtaatagtttcaaaagctccatcgtata 47993767  T
Q  593 ttttcaaattaca 605  Q
    |||||||||||||    
T  47993766 ttttcaaattaca 47993754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 21080321 - 21080468
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080321 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21080420  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  21080421 aattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 2233978 - 2234099
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  2233978 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 2234077  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  2234078 ggtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 494 - 615
Target Start/End: Original strand, 22857715 - 22857836
Alignment:
Q  494 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaat 593  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcaccccggtaatagtttcaaagctctgtcataat 22857814  T
Q  594 tttcaaattacaaatacaacac 615  Q
    ||  |||||||||| |||||||    
T  22857815 ttgaaaattacaaaaacaacac 22857836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 32211965 - 32212112
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211965 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 32212064  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32212065 aattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 42572747 - 42572600
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  42572747 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 42572648  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572647 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 17496221 - 17496100
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17496221 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17496122  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  17496121 ggtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 17556993 - 17557114
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17556993 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17557092  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  17557093 ggtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 12935231 - 12935084
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  12935231 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 12935132  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  12935131 aattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 19308876 - 19309023
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  19308876 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 19308975  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  19308976 aattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 9973565 - 9973452
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  9973565 atctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 9973466  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  9973465 ctcaacccggtaat 9973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 47176496 - 47176643
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  47176496 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 47176595  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47176596 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 24528457 - 24528344
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  24528457 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtcgtga 24528358  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  24528357 ctcaacccgataat 24528344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 559
Target Start/End: Complemental strand, 33226517 - 33226416
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33226517 atctgagctgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33226418  T
Q  558 ct 559  Q
    ||    
T  33226417 ct 33226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 16538699 - 16538813
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16538699 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16538798  T
Q  174 ggtagatcacacact 188  Q
     ||||||||||||||    
T  16538799 agtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 16626963 - 16626849
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16626963 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16626864  T
Q  174 ggtagatcacacact 188  Q
     ||||||||||||||    
T  16626863 agtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 43893689 - 43893542
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||| ||||||||||    
T  43893689 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaagtgtg 43893590  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43893589 aattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 614 - 720
Target Start/End: Complemental strand, 5888458 - 5888351
Alignment:
Q  614 actactgaataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagt-gtt 712  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||||||| |||    
T  5888458 actaccgaatatgatgagggacgccggaggtgaggtgatgcggaggccgcgcctcgtcgccccaccaccaattggatttacatcgtgatgaatagtggtt 5888359  T
Q  713 ggatttga 720  Q
    ||||||||    
T  5888358 ggatttga 5888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 7e-31
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 28292496 - 28292607
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  28292496 atctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtga 28292593  T
Q  558 ctcaccccggtaat 571  Q
    || | |||||||||    
T  28292594 cttaacccggtaat 28292607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 47544749 - 47544828
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgg 127  Q
    |||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47544749 ggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 4579603 - 4579507
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 3357634 - 3357728
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggta-gtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| ||   || ||||||||||||||||||| ||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3357728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 569
Target Start/End: Complemental strand, 27256343 - 27256234
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  27256343 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 27256245  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  27256244 tcaacccggta 27256234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 466 - 570
Target Start/End: Complemental strand, 8076145 - 8076040
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    ||||||||||||||| | ||| ||||| ||||||  ||||||||| || ||| |||||| |||||||||||||||| |||||||||||||||||||| ||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacc 8076046  T
Q  565 cggtaa 570  Q
    | ||||    
T  8076045 cagtaa 8076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 9650967 - 9651063
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9651063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 23246933 - 23247029
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||| ||||||||| ||||||||||||||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactca 23247029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 23866163 - 23866067
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 23866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 26341294 - 26341198
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| |||||||||| ||||||||||||||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 26341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33241775 - 33241732
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33241775 cactaagaatggtatttttgttgggaaagggtacgccactgatg 33241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 622 - 693
Target Start/End: Original strand, 36935090 - 36935161
Alignment:
Q  622 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatcta 693  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||| | || |||| |||||||||    
T  36935090 ataggatgagggatgccggaggtgaggtgatgcggaggccgcgcctcgtcgcacgactaccaattggatcta 36935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47997572 - 47997529
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47997572 cactaagaatggtatttttgttgggaaagggtacgccactgatg 47997529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 466 - 570
Target Start/End: Complemental strand, 12254174 - 12254069
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    |||||||||||| || ||||| | ||| |||||| ||||||||||||| ||| |||||| | |||| ||||||||| ||||||||||||| |||||| ||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaacc 12254075  T
Q  565 cggtaa 570  Q
     |||||    
T  12254074 tggtaa 12254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 47176904 - 47176993
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcc-tctcttctccctc 294  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| ||||| |||||||||||| || |||| ||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctggttttctccccttctcatctccctc 47176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 4930328 - 4930232
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||| |  ||| ||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 4930232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 13314236 - 13314332
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| || || || || ||||||||||||||||| || ||  ||| || |||||||||||||||| ||||| ||||||||||||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactca 13314332  T

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Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 44423137 - 44423233
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| |||||  |||| |||||| ||||| |||| || ||| |||||| |||||||||||||||| ||||| ||| ||||||||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactca 44423233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 10388367 - 10388461
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| |||||  |||| | ||||| | |||||||||| || | |||| | |||||||||||||| ||||||||||||||||||||    
T  10388367 tgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttgggcaatgccacaaaacgtcttaaagagagcgacctggtcgtgactca 10388461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 8268388 - 8268292
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| |||||  |||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||||||||||||||||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 8268292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 44510677 - 44510773
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| | |||||||||||||| ||| | ||||||||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactca 44510773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 464 - 561
Target Start/End: Complemental strand, 19640395 - 19640298
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||| || | |||||  ||||||||||||||||| ||  |||| || || |||||||||||||||||| ||| || ||||||||||    
T  19640395 gctgttttatcctggaggcg-cacggttcttagtctaccttgcacaaactcgggtaatgtcgtgaaacgtcttaaagaaagagacatgatcgtgactca 19640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 464 - 569
Target Start/End: Original strand, 40865351 - 40865456
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 562  Q
    ||||||||||||||||| |  | |||||| ||||||||||||||||| || | ||||||||| ||    ||||||||||||| ||||||| ||||||||     
T  40865351 gctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgagtagtgccgtgatttatcttaaagaaagcaacctggttgtgactcaa 40865449  T
Q  563 cccggta 569  Q
    |||||||    
T  40865450 cccggta 40865456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 27238337 - 27238241
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttag-gtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| || || ||||| | ||| |||||| |||| ||||| || | | |||||| | |||||||||||||| ||||||||||||||||||||    
T  27238337 tgttttatcttgcaggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactca 27238241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 42627214 - 42627289
Alignment:
Q  483 ggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    |||| ||||| |||||| | |||||||| || || | ||||| |||||||||||||||| ||||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtga 42627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 515 - 561
Target Start/End: Complemental strand, 16372443 - 16372397
Alignment:
Q  515 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| |||||| ||||||||| |||||| |||||||||||||    
T  16372443 ggtagtgccacgaaacatcttaaagagagcgacttggtcgtgactca 16372397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 255; Significance: 1e-141; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 206 - 614
Target Start/End: Original strand, 8962 - 9356
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||| |||||||| ||| ||| ||||||||    |||||     
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctctagttttctccccttctcatctccctc----ggtttg 9057  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    ||||||||||| |||||||  ||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||           ||||||||    
T  9058 tgttgacgaactgttcttttcttcctccttgtttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaac-----------catattga 9146  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9147 ggtgttattctcgagcaatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtcttcctt 9246  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9247 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 8534 - 8681
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8534 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8633  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8634 aatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 251; Significance: 1e-139; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 196 - 616
Target Start/End: Complemental strand, 37361 - 36956
Alignment:
Q  196 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 294  Q
    ||||||||  ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||| ||||    
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatcttcctc 37262  T
Q  295 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 394  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||             
T  37261 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttttgaaac--------- 37175  T
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
      ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||    
T  37174 --catattgaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgct 37077  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 594  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  37076 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccagtaatagtttcaaagctctgtcgtaa-t 36978  T
Q  595 ttcaaattacaaatacaacact 616  Q
    ||||||||||||| ||||||||    
T  36977 ttcaaattacaaaaacaacact 36956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 137 - 195
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  137 tgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 460 - 569
Target Start/End: Original strand, 47851 - 47960
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||| ||| |  | |||||| ||||||||||||||||| || || |||||||  ||   |||||| |||||||||||||||||||||    
T  47851 ctgggctgttttatccttgaggca-cacggttgttagtctaccttgcacaattttgggtagtgccctgatttgtcttatagaaagcgacctggtcgtgac 47949  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  47950 tcaacccggta 47960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 206 - 607
Target Start/End: Original strand, 21643835 - 21644222
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| | | ||||||||    |||||     
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttcccatctccctc----ggtttg 21643930  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||           ||||||||    
T  21643931 tgttgatgaaccgttctttttttcctccttctttggtttctcgagtggtctgcgtaccatattatagtggcttttcgaaac-----------catattga 21644019  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21644020 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagtcggcgcggttgctagtctacctt 21644119  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattac 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  21644120 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgattcaccccggtaatactttcaaagctctgtcgtaattttcaaattac 21644219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 196 - 614
Target Start/End: Complemental strand, 24885064 - 24884660
Alignment:
Q  196 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctc 294  Q
    ||||||||  ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 24884965  T
Q  295 ccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaa 394  Q
        ||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||             
T  24884964 ----ggtttgtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac--------- 24884878  T
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgtttt-atcctggagacggcgcggttgc 493  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||||||||||||||| ||||||    
T  24884877 --catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagaaataatctgggctgtttttatcctggagacggcgtggttgc 24884780  T
Q  494 tagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaat 593  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||     
T  24884779 tagtctaccttgcacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtcgtgactcaccccggtaatagtttcaaagctctgccgtaa- 24884681  T
Q  594 tttcaaattacaaatacaaca 614  Q
    |||||||||||||| ||||||    
T  24884680 tttcaaattacaaaaacaaca 24884660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 292 - 596
Target Start/End: Original strand, 17955626 - 17955919
Alignment:
Q  292 ctcccgcggtttatgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcg 391  Q
    ||||| |||||| |||||||||| ||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||          
T  17955626 ctccctcggtttgtgttgacgaatcgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaac------ 17955719  T
Q  392 aaaaccatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggtt 491  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  17955720 -----catattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggtt 17955814  T
Q  492 gctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgta 591  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17955815 gctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgta 17955914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 43998984 - 43999360
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||| |   |||||| |||| ||||||||||||||||| ||||| |||| ||||||| ||| ||| ||||||||    |||||     
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctgattttctccccttctcatctccctc----ggtttg 43999079  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  43999080 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattga 43999168  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacctt 504  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  43999169 ggtgttattctcgagcgatttttggtagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcagttgctagtctacctt 43999268  T
Q  505 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  43999269 gcacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacccagtaatagtttcaaagctctgtcgtaatttt 43999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 326 - 607
Target Start/End: Original strand, 42514245 - 42514515
Alignment:
Q  326 ttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgattt 425  Q
    |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  42514245 ttcctccttctttgttttctcgagtggtctgcgtactatattagagtggtttttcgaaac-----------catattgaggtgttattctcgagcgattt 42514333  T
Q  426 ctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgc 525  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42514334 ctggcagtgcagcctttaatcgtacagtttgaacctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgc 42514433  T
Q  526 gaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaattttcaaattacaaa 607  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42514434 gaaacgtcttaaagaaagcgacctggtcatgactcaccccggtaatagttttaaagctctgtcgtaattttcaaattacaaa 42514515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 32011066 - 32010820
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011066 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 32010967  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32010966 ggtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32010867  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32010866 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 32016240 - 32015994
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32016240 cttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 32016141  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32016140 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32016041  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  32016040 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 32015994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 192; E-Value: 1e-103
Query Start/End: Original strand, 48 - 303
Target Start/End: Original strand, 2165394 - 2165650
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttgg-aatgtaaacacaaggatggagaaactagtgtaaagtgt 146  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  2165394 ggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaagtgt 2165493  T
Q  147 gaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 246  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165494 gaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 2165593  T
Q  247 ctgagaatcgaatactcttatctggttttctctcctctcttctccctcccgcggttt 303  Q
     |||||||| ||| ||||| ||| |||||||||| ||||||||||||||||||||||    
T  2165594 ttgagaatcaaatgctcttctctagttttctctcatctcttctccctcccgcggttt 2165650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 5e-81
Query Start/End: Original strand, 395 - 614
Target Start/End: Complemental strand, 32015866 - 32015645
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  32015866 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 32015767  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  32015766 agtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 32015667  T
Q  593 ttttcaaattacaaatacaaca 614  Q
    ||||||||||||||| ||||||    
T  32015666 ttttcaaattacaaaaacaaca 32015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 4e-60
Query Start/End: Original strand, 206 - 480
Target Start/End: Original strand, 21643395 - 21643652
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    | |||     
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----gatttg 21643490  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattga 404  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||           ||||||||||||    
T  21643491 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggcttttcg-----------aaaccatattga 21643579  T
Q  405 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggag 480  Q
    |||||||||||||||||||||   |||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  21643580 ggtgttattctcgagcgattt---gcagtgcaacctttaatcgtacagttagaatctgggctgttttatcctggag 21643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 43998546 - 43998693
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43998546 ggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaagtgtg 43998645  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43998646 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 17955134 - 17955281
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||||||       ||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17955134 ggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaagtgtg 17955233  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17955234 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 24885445 - 24885324
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  24885445 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 24885346  T
Q  174 ggtagatcacacactctagtag 195  Q
    ||||||||||||||||||||||    
T  24885345 ggtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 19430117 - 19430004
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19430117 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19430018  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  19430017 ctcaacccggtaat 19430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 19435619 - 19435506
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19435619 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19435520  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  19435519 ctcaacccggtaat 19435506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 19566266 - 19566153
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19566266 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19566167  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  19566166 ctcaacccggtaat 19566153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 19571768 - 19571655
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19571768 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 19571669  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||||||||    
T  19571668 ctcaacccggtaat 19571655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 458 - 561
Target Start/End: Original strand, 33616719 - 33616822
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33616719 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 33616818  T
Q  558 ctca 561  Q
    ||||    
T  33616819 ctca 33616822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21641520 - 21641684
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641615  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641616 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21641895 - 21642059
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21641990  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21641991 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21642270 - 21642434
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    ||||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggttta 21642365  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642366 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21643020 - 21643184
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21643115  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21643116 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 42513848 - 42513995
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  42513848 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaagtgtg 42513947  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  42513948 aattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 206 - 373
Target Start/End: Original strand, 21642645 - 21642809
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | |||||||||| ||| ||| ||||||||    |||||     
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctc----ggtttg 21642740  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtg 373  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21642741 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 31030631 - 31030518
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| || || ||||||| |||||||||||||||||| ||||||||||||||||    
T  31030631 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtcgtga 31030532  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  31030531 ctcaacccgataat 31030518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 622 - 748
Target Start/End: Original strand, 20519763 - 20519890
Alignment:
Q  622 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaatagt-gttggatttga 720  Q
    ||||||||||| || |||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||    
T  20519763 ataggatgaggaacaccggaggtaaggtgatgcggaggccgcgcctcgtcgcaccaccaccatttggatctacattgtgatgaatagtggttggatttga 20519862  T
Q  721 ggaaaagcgaaaaccgaggtgtggtttt 748  Q
    || |||| | |||| | |||||||||||    
T  20519863 gggaaaggggaaacggtggtgtggtttt 20519890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 21641184 - 21641273
Alignment:
Q  105 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21641184 ttggaatgtaaatacaaggatgtagat-ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 622 - 748
Target Start/End: Complemental strand, 38148759 - 38148632
Alignment:
Q  622 ataggatgagggacgccggagatgaggtgatgcggaggctgcgcctcgtcgcgccaccaccatttggatctacatcgtgatgaat-agtgttggatttga 720  Q
    ||||||||||||||||||||| ||||||||||||||||| || |||| |||| ||||| |||||||||||||||||||||| ||| |  |||||||||||    
T  38148759 ataggatgagggacgccggaggtgaggtgatgcggaggccgcacctcatcgcaccaccgccatttggatctacatcgtgattaataacggttggatttga 38148660  T
Q  721 ggaaaagcgaaaaccgaggtgtggtttt 748  Q
    ||||||| | ||||   |||||||||||    
T  38148659 ggaaaaggggaaacgatggtgtggtttt 38148632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 504 - 614
Target Start/End: Complemental strand, 32010595 - 32010483
Alignment:
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-attttcaaat 601  Q
    ||||||| | |||||||||||||||| |||||||| | |||||||||||||||||||| ||||||||||||||| |||||||  ||||| ||||||||||    
T  32010595 tgcacaattcaggtagtgccgcgaaatgtcttaaaaagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtatattttcaaat 32010496  T
Q  602 tacaaatacaaca 614  Q
    |||||| ||||||    
T  32010495 tacaaaaacaaca 32010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 465 - 571
Target Start/End: Complemental strand, 13584454 - 13584340
Alignment:
Q  465 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg--------tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtg 556  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| ||        |||||||||||||||||||||||| |||||||||||||||    
T  13584454 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtg 13584355  T
Q  557 actcaccccggtaat 571  Q
    | ||| || ||||||    
T  13584354 attcaacctggtaat 13584340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 31449866 - 31449962
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 31449962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 38182237 - 38182333
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||| ||| || |||||| |||||||| ||||||| ||||||||||||||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 38182333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 44925923 - 44926019
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||| ||||||| ||||||||||||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactca 44926019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 15875668 - 15875764
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||  || || |||||| ||||||||| |||||| |||||||||||||| |||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactca 15875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 19166729 - 19166633
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| || ||  |||||| |||||||||||||||| |||||| |||||||||||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactca 19166633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 40125885 - 40125981
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||| ||||||||||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactca 40125981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21645577 - 21645620
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  21645577 cactaagaatggtatttttgttgggaaagggtacgccactgatg 21645620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32014298 - 32014255
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32014298 cactaagaatggtatttttgttgggaaagggtacgccactgatg 32014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 395 - 449
Target Start/End: Complemental strand, 32010659 - 32010605
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgta 449  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32010659 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgta 32010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 17026030 - 17025934
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaac-ttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||  || || |||||| |||||||||||||||| ||||||||||||||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17025934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 17556522 - 17556426
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaac-ttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||  || || |||||| |||||||||||||||| ||||||||||||||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 17556426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 18876367 - 18876462
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||  || || |||||| |||||||||||||| | ||||||||||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 18876462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 24090722 - 24090626
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| || || | ||| || ||| ||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 24090626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 33416642 - 33416546
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| || ||  |||||| |||||||||||||||| | ||||||||||||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactca 33416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 277
Target Start/End: Original strand, 42514182 - 42514245
Alignment:
Q  214 gagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttct 277  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttct 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 1807565 - 1807471
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| |||||||| |||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactca 1807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 563
Target Start/End: Complemental strand, 2965725 - 2965627
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcacc 563  Q
    ||||||||||| ||| ||| | ||||| |||| |  ||||||||| || ||| |||||| |||||||| ||||||| ||||||||||||||||||||||    
T  2965725 tgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcacc 2965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 460 - 561
Target Start/End: Complemental strand, 37771812 - 37771711
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||| ||||||||||||||| |  | |||||| ||||||||||| ||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  37771812 ctgggttgttttatcctggaggca-cacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 37771714  T
Q  559 tca 561  Q
    |||    
T  37771713 tca 37771711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 43302718 - 43302815
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa--cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||   || |  |||||| |||||||||||||||| | ||||| |||||| |||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaactca 43302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 17953873 - 17953969
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||| ||||| ||||| ||||| || |||  ||||||||| || ||  |||||| ||||||||||||||||||||||| ||||||| |||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactca 17953969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 34118561 - 34118465
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||||  || || || ||||| |||||| |||||||||| || ||  ||||||  ||||||||||||||| ||||||||||||||||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactca 34118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 36683674 - 36683578
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| | ||| ||||| |||||| |||| ||||| || ||  |||||| |||||||||||||||| |||||||| ||| |||||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactca 36683578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Original strand, 40130739 - 40130782
Alignment:
Q  518 agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  40130739 agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 40130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 466 - 559
Target Start/End: Original strand, 1910969 - 1911063
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgact 559  Q
    |||||||| |||||| | ||| ||||| |||||| | |||||||| || |  ||||||| |||||||||||||||| ||||||||| ||||||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgact 1911063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 28559656 - 28559750
Alignment:
Q  468 ttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    |||||||||| |||||||| ||||| |||| | |||||||||| || ||  |||||| |||||||||||| ||| |||||| | |||||||||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactca 28559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 494 - 561
Target Start/End: Original strand, 34818726 - 34818794
Alignment:
Q  494 tagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||||| || || ||||| || ||   |||||||||||||||||||||||||||||||    
T  34818726 tagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaagaaagcgacctggtcgtgactca 34818794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 464 - 566
Target Start/End: Original strand, 25367991 - 25368093
Alignment:
Q  464 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcac 562  Q
    ||||||||||||||||| |  | |||||| ||||||||||||||||| || || ||||| || ||   |||||||| |||| |||||||||||||||||     
T  25367991 gctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgtcgtgatttgtcttaaaaaaagtgacctggtcgtgactcaa 25368089  T
Q  563 cccg 566  Q
    ||||    
T  25368090 cccg 25368093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 488 - 561
Target Start/End: Original strand, 4238337 - 4238411
Alignment:
Q  488 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||| ||||||| ||||||||||||||||||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4238411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 488 - 561
Target Start/End: Original strand, 4243076 - 4243150
Alignment:
Q  488 ggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||| |||||| |||||||||| || ||  ||||||  ||||||| ||||||| ||||||||||||||||||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactca 4243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 528 - 561
Target Start/End: Original strand, 15951584 - 15951617
Alignment:
Q  528 aacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||| ||||||||||||||||||||    
T  15951584 aacgtcttaaagagagcgacctggtcgtgactca 15951617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 230; Significance: 1e-126; HSPs: 5)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 206 - 601
Target Start/End: Original strand, 13493 - 13877
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||| ||| ||| ||||||||    |||||     
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctc----ggtttg 13588  T
Q  305 tgttgacgaaccgttctttctttcctcct-tctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 403  Q
    |||||||||||| ||||||  |||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||           |||| ||    
T  13589 tgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaac-----------catactg 13677  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgctagtctacct 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  13678 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13777  T
Q  504 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc--aaagctctgtcgtaattttcaaat 601  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  13778 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaattgtttcaaaaagctctgtcgtaatttttaaat 13877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 206 - 596
Target Start/End: Original strand, 18946 - 19328
Alignment:
Q  206 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctcct-ctcttctccctcccgcggttta 304  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||| ||| ||| ||||||||    |||||     
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctc----ggtttg 19041  T
Q  305 tgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatatt-g 403  Q
    |||||||||||||||||||   ||||||||||||||||| ||||| ||||| |||||| |||| |||||||||||||||||           |||||| |    
T  19042 tgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaac-----------catatttg 19130  T
Q  404 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttg--gcatctgggctgttttatcctggagacggcgc---ggttgctagtc 498  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||   | ||||||||||||||||||||||||||||||   |||||||||||    
T  19131 aggtgttattctcgagcgatttctggcagtgaaacctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtc 19230  T
Q  499 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatttt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  19231 taccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacatggtcgtgactcaccccagtaatattttcgaagctctgtcgtaatttt 19328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 12986 - 13133
Alignment:
Q  48 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 147  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  12986 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13085  T
Q  148 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13086 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 18500 - 18590
Alignment:
Q  105 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 195  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18500 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15236 - 15279
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15236 cactaagaatggtatttttgttgggaaagggtacgccactgatg 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 203; Significance: 1e-110; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 32085 - 31839
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32085 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 31986  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31985 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 31886  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  31885 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 31839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 395 - 614
Target Start/End: Complemental strand, 31711 - 31492
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  31711 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgct 31612  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31611 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttcaaagctctgtcgtaatt 31512  T
Q  595 ttcaaattacaaatacaaca 614  Q
    ||||||||||||| ||||||    
T  31511 ttcaaattacaaaaacaaca 31492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 26913 - 26667
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26913 cttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 26814  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26813 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 26714  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  26713 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 26667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 395 - 607
Target Start/End: Complemental strand, 26539 - 26325
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||    
T  26539 accatatcgaggtgtcattctcgagagatttctggcagtgcagcctttaatcgtacagtaagaatatgggctgttttatcctggagacggcgcggttgct 26440  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||| || |||| ||||| ||||||||||||||| |||||||  ||||| |    
T  26439 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacttgatcgtaactcatcccggtaatagtttcaaaagctccatcgtata 26340  T
Q  593 ttttcaaattacaaa 607  Q
    |||||||||||||||    
T  26339 ttttcaaattacaaa 26325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30145 - 30102
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30145 cactaagaatggtatttttgttgggaaagggtacgccactgatg 30102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Complemental strand, 3564 - 3318
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3564 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 3465  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3464 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3365  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  3364 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 395 - 614
Target Start/End: Complemental strand, 3224 - 3003
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  3224 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 3125  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  3124 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 3025  T
Q  593 ttttcaaattacaaatacaaca 614  Q
    ||||||||||||||| ||||||    
T  3024 ttttcaaattacaaaaacaaca 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 74 - 323
Target Start/End: Original strand, 80971 - 81217
Alignment:
Q  74 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  80971 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 81070  T
Q  174 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  81071 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 81170  T
Q  274 ttctctcctctcttctccctcccgcggtttatgttgacgaaccgttcttt 323  Q
    ||||| ||| |||  |  |||||||| ||| |||||||||| ||||||||    
T  81171 ttctcccct-tctcat--ctcccgcgatttgtgttgacgaatcgttcttt 81217  T

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Target: scaffold0052; HSP #2
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 395 - 614
Target Start/End: Original strand, 81311 - 81532
Alignment:
Q  395 accatattgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttggcatctgggctgttttatcctggagacggcgcggttgct 494  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  81311 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 81410  T
Q  495 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccccggtaatagtttc-aaagctctgtcgta-a 592  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||  ||||| |    
T  81411 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcatcccggtaatagtttcaaaagctccatcgtata 81510  T
Q  593 ttttcaaattacaaatacaaca 614  Q
    ||||||||||||||| ||||||    
T  81511 ttttcaaattacaaaaacaaca 81532  T

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Target: scaffold0011 (Bit Score: 86; Significance: 2e-40; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 458 - 559
Target Start/End: Complemental strand, 1668 - 1567
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1668 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtga 1569  T
Q  558 ct 559  Q
    ||    
T  1568 ct 1567  T

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Target: scaffold0011; HSP #2
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 7149 - 7036
Alignment:
Q  458 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtga 557  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| |    
T  7149 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtcgtaa 7050  T
Q  558 ctcaccccggtaat 571  Q
    |||| |||| ||||    
T  7049 ctcaacccgataat 7036  T

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Target: scaffold0132 (Bit Score: 81; Significance: 2e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 2765 - 2877
Alignment:
Q  459 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  2765 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 2864  T
Q  559 tcaccccggtaat 571  Q
    ||| |||||||||    
T  2865 tcaacccggtaat 2877  T

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Target: scaffold0132; HSP #2
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 459 - 571
Target Start/End: Original strand, 10725 - 10837
Alignment:
Q  459 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  10725 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtcgtgac 10824  T
Q  559 tcaccccggtaat 571  Q
    ||| |||||||||    
T  10825 tcaacccggtaat 10837  T

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Target: scaffold0067 (Bit Score: 55; Significance: 6e-22; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 466 - 571
Target Start/End: Original strand, 33968 - 34074
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-cttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 564  Q
    |||||||||||| ||  || ||||||| || ||||||||| |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  33968 tgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T
Q  565 cggtaat 571  Q
    || ||||    
T  34068 cgataat 34074  T

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Target: scaffold0352 (Bit Score: 53; Significance: 9e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 7199 - 7103
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 7103  T

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Target: scaffold0182 (Bit Score: 53; Significance: 9e-21; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 53; E-Value: 9e-21
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 9887 - 9983
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| |||||||||||||||| ||||||||||||||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 9983  T

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Target: scaffold0002 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 4169 - 4073
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||||| ||||| |||||||||| ||||||||||||||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactca 4073  T

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Target: scaffold0165 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15585 - 15542
Alignment:
Q  1 cactaagaatggtatttttgttgggaaagggtacgccactgatg 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15585 cactaagaatggtatttttgttgggaaagggtacgccactgatg 15542  T

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Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 460 - 569
Target Start/End: Complemental strand, 45885 - 45776
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   || ||||||||||||||||||| |||||    
T  45885 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 45787  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  45786 tcaacccggta 45776  T

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Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 1220 - 1321
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||| ||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   ||||||||||||||||||||||||||||    
T  1220 ctgggctgttttatcttggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtcgtgac 1318  T
Q  559 tca 561  Q
    |||    
T  1319 tca 1321  T

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Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 460 - 569
Target Start/End: Original strand, 152902 - 153011
Alignment:
Q  460 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgac 558  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||| || || |||||||| ||   || ||||||||||||||||||| |||||    
T  152902 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggttgtgac 153000  T
Q  559 tcaccccggta 569  Q
    ||| |||||||    
T  153001 tcaacccggta 153011  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 83161 - 83065
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||  ||||| |||||| ||||||| || || || | ||| | |||||||||||||||| ||||||||||||||||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactca 83065  T

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Target: scaffold0012 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 466 - 561
Target Start/End: Original strand, 166086 - 166182
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaactta-ggtagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 561  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| ||  || |||||| |||||||||||||||| ||||||||||| ||||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactca 166182  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 466 - 555
Target Start/End: Complemental strand, 35729 - 35639
Alignment:
Q  466 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttagg-tagtgccgcgaaacgtcttaaagaaagcgacctggtcgt 555  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| || ||  |||| | |||||||||||||||| |||| | |||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgt 35639  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 461 - 549
Target Start/End: Original strand, 171711 - 171798
Alignment:
Q  461 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt-aggtagtgccgcgaaacgtcttaaagaaagcgacct 549  Q
    |||||||||||||||| | |||| || ||||| |||||| | |||||||| || ||| |||||| |||||||||||||||| ||||||||    
T  171711 tgggctgttttatcctag-gacgtcgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

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