View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_low_70 (Length: 251)
Name: NF15735_low_70
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_low_70 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 21123330 - 21123109
Alignment:
| Q |
20 |
cttggaacatgctcctccttaactgcaatgagtatgttcttcctacacctactccaatttcatacctcaacaaatcttctactgggatgtgatagtcttc |
119 |
Q |
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| T |
21123330 |
cttggaacatgctcctccttaactgcaatgagtatgttcttcctacacctactccaatttcatacctcaacaaatcttctactgggatgtgatagtcttc |
21123231 |
T |
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| Q |
120 |
aagaaacatacagcacatcagaaatatcagttctgctgctctattttgtaaacactcatagctggacttgatacaatttaaagcatcgctctctcctcct |
219 |
Q |
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|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21123230 |
aagaaacatacagcacatcagaaatatctgttctgcttctctattttgtaaacactcatagctggacttgatacaatttaaagcatcgctctctcctcct |
21123131 |
T |
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| Q |
220 |
tcatgatcatcagatgcctttg |
241 |
Q |
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|||||||||||||||||||||| |
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| T |
21123130 |
tcatgatcatcagatgcctttg |
21123109 |
T |
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