View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_low_71 (Length: 251)
Name: NF15735_low_71
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_low_71 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 47897626 - 47897411
Alignment:
| Q |
18 |
agacaatttgagcataagcaaagaaatcaacgtattttgcttggatatttgaatggacaaaaattaaatgcaggaacataaagaacatacattgcatata |
117 |
Q |
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| T |
47897626 |
agacaatttgagcataagcaaagaaatcaacgtattttgcttggatatttgaatggacaaaacttaaatgcaggaacataaagaacatacattgcatata |
47897527 |
T |
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| Q |
118 |
agtgttgccctttttgaatttgccgcatttcttatgaagatgaaaatataacagtgaaaaagaagggtaaagttgacactcttttaagctatagtatgtc |
217 |
Q |
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| T |
47897526 |
agtgttgccctttttgaatttgccgcatttcttatgaagatgaaaatataacagtgaaaaagaagggtaaagttgacactcttttaagctatagtatgtc |
47897427 |
T |
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| Q |
218 |
cattaatatagatttc |
233 |
Q |
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| T |
47897426 |
cattaatatagatttc |
47897411 |
T |
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