View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15735_low_82 (Length: 234)
Name: NF15735_low_82
Description: NF15735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15735_low_82 |
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Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 10495147 - 10495320
Alignment:
| Q |
20 |
aaaaacctgatagcaatccaaaatatggttatactttaaggcggtggagtgcgtcaaacgctctatttacttatgaggtaggagtgaggtagtttatgaa |
119 |
Q |
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|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10495147 |
aaaaacttgataacaatccaaaatatggttatactttaaggcggtggagcgcgtcaaacgctctatttacttatgaggtaggagtgaggtagtttatgaa |
10495246 |
T |
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| Q |
120 |
atgtagtaaaaggtagttactcttagttgcacgttgttatggaatgctatttctcttgaggtgatgcaagaggt |
193 |
Q |
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|||||||||||||| ||||| || |||||||| ||||| |||||||||||||||||||||||| |||||||||| |
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| T |
10495247 |
atgtagtaaaaggttgttaccctgagttgcacattgttctggaatgctatttctcttgaggtggtgcaagaggt |
10495320 |
T |
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