View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15736_high_19 (Length: 258)
Name: NF15736_high_19
Description: NF15736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15736_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 41836602 - 41836833
Alignment:
| Q |
11 |
attcttcggttcaaacaacatgaatattcgctaagacattacaagtgcaccaaaactcatatagttgttttatgagagtattcttcgtctacaaatattt |
110 |
Q |
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| T |
41836602 |
attcttcggttcaaacaacatgaatattcgctaagacattacaagtgcaccaaaactcatatagttgttttatgagagtattcttcgtctacaaatattt |
41836701 |
T |
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| Q |
111 |
gattatagaatctttgatgactgttgagtcgaggtacacgtttatcgctaatgatataaactgctactttatgcaaaacctttttattcattgcttgatt |
210 |
Q |
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| T |
41836702 |
gattatagaatctttgatgactgttgagtcgaggtacatgtttatcgctaatgatataaacttctactttatgcaaaacctttttattcattgcttgatt |
41836801 |
T |
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| Q |
211 |
aattttgaataatttagaactagccaaaatgt |
242 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
41836802 |
aattttgaataatttagaactagccaaaatgt |
41836833 |
T |
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