View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15737_high_24 (Length: 334)
Name: NF15737_high_24
Description: NF15737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15737_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 5 - 277
Target Start/End: Original strand, 22776996 - 22777268
Alignment:
| Q |
5 |
tgttcttctttatcctttgttgttttgtcctgtttcannnnnnnctcgtttgaaacttctttttcaattatagatgatgtagttttggatatatttccag |
104 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22776996 |
tgttcttctttatcctttgttgttttgtcctgtttcatttttttctcgtttgaaacttctttttcaattatagatgatgtagttttggatatatttccag |
22777095 |
T |
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| Q |
105 |
tactaatcatctcaagcttttcatctgcggctgcatctaaacgaacgttcgtggaacagccttgcttttcagtggttaataaaagaagattggaagagta |
204 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||||||||||||||| |
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| T |
22777096 |
tactaatcatctcaagtttttcatctgcggctgcatctaaacgaacgttggtggaacaatctcgtttttcagtggttaataaaagaagattggaagagta |
22777195 |
T |
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| Q |
205 |
aaggatgtataatattatcatgattaggatcaaccaagtgatgatacgttgcctgaatgagtacatttggttt |
277 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
22777196 |
aaggatgtataatattatcatgattaggatcagccaagtgatgatacgttgcctgaatgagtacatttggttt |
22777268 |
T |
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