View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15739_low_2 (Length: 393)

Name: NF15739_low_2
Description: NF15739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15739_low_2
NF15739_low_2
[»] chr4 (61 HSPs)
chr4 (87-321)||(27764195-27764431)
chr4 (132-310)||(26447299-26447477)
chr4 (135-321)||(22181122-22181307)
chr4 (132-321)||(21097140-21097329)
chr4 (132-310)||(45255975-45256155)
chr4 (161-321)||(4168387-4168547)
chr4 (134-315)||(38485554-38485733)
chr4 (160-302)||(637882-638024)
chr4 (136-271)||(36621627-36621762)
chr4 (132-310)||(51836977-51837155)
chr4 (224-321)||(18923351-18923446)
chr4 (162-247)||(50563679-50563764)
chr4 (131-197)||(50643742-50643808)
chr4 (1-54)||(27764109-27764162)
chr4 (134-197)||(29826606-29826669)
chr4 (135-208)||(1729604-1729678)
chr4 (171-222)||(6386516-6386567)
chr4 (343-382)||(4168566-4168605)
chr4 (343-382)||(21097348-21097387)
chr4 (344-382)||(27764454-27764492)
chr4 (344-382)||(51836939-51836977)
chr4 (130-197)||(30597697-30597765)
chr4 (200-244)||(48077817-48077861)
chr4 (343-382)||(18923465-18923504)
chr4 (131-197)||(51921265-51921332)
chr4 (132-197)||(1621875-1621941)
chr4 (132-197)||(10472497-10472563)
chr4 (132-197)||(13635725-13635791)
chr4 (132-197)||(15051136-15051202)
chr4 (344-382)||(26447261-26447299)
chr4 (132-197)||(26578189-26578255)
chr4 (132-197)||(36011843-36011909)
chr4 (344-382)||(45256155-45256193)
chr4 (132-197)||(46672439-46672505)
chr4 (132-197)||(49492512-49492578)
chr4 (346-382)||(638032-638068)
chr4 (130-197)||(11785972-11786040)
chr4 (130-197)||(11798139-11798207)
chr4 (132-180)||(48077862-48077910)
chr4 (138-178)||(49492405-49492445)
chr4 (139-178)||(9813148-9813187)
chr4 (139-178)||(10473651-10473690)
chr4 (139-178)||(11786107-11786146)
chr4 (139-178)||(11798274-11798313)
chr4 (139-178)||(13635619-13635658)
chr4 (139-178)||(15051030-15051069)
chr4 (139-178)||(22180208-22180247)
chr4 (343-382)||(22181064-22181103)
chr4 (139-178)||(26577263-26577302)
chr4 (139-178)||(30358840-30358879)
chr4 (139-178)||(30597832-30597871)
chr4 (139-178)||(45256898-45256937)
chr4 (139-178)||(49425951-49425990)
chr4 (139-178)||(50644673-50644712)
chr4 (139-178)||(53865066-53865105)
chr4 (140-178)||(638997-639035)
chr4 (343-376)||(38485496-38485529)
chr4 (138-178)||(8157292-8157332)
chr4 (139-167)||(16475034-16475062)
chr4 (161-197)||(25574128-25574164)
chr4 (138-178)||(33883486-33883526)
[»] chr8 (49 HSPs)
chr8 (132-321)||(39021975-39022164)
chr8 (130-321)||(32987323-32987512)
chr8 (127-310)||(7058109-7058292)
chr8 (136-310)||(4836588-4836762)
chr8 (136-310)||(4842033-4842207)
chr8 (132-321)||(15260727-15260917)
chr8 (161-310)||(8550533-8550682)
chr8 (161-271)||(7614097-7614207)
chr8 (131-228)||(1208708-1208805)
chr8 (161-247)||(15181820-15181906)
chr8 (208-310)||(2750101-2750205)
chr8 (132-197)||(42433701-42433766)
chr8 (260-302)||(1208829-1208871)
chr8 (344-382)||(4836550-4836588)
chr8 (344-382)||(4841995-4842033)
chr8 (346-382)||(39022186-39022222)
chr8 (343-382)||(15260669-15260708)
chr8 (139-178)||(30414047-30414086)
chr8 (132-199)||(40012180-40012247)
chr8 (131-197)||(41099181-41099248)
chr8 (344-382)||(1208877-1208915)
chr8 (344-382)||(7058292-7058330)
chr8 (344-382)||(8550682-8550720)
chr8 (132-197)||(10237354-10237420)
chr8 (132-197)||(19784271-19784337)
chr8 (348-382)||(39658392-39658426)
chr8 (132-197)||(43690640-43690706)
chr8 (139-178)||(185883-185922)
chr8 (139-178)||(1149917-1149956)
chr8 (139-178)||(4835520-4835559)
chr8 (139-178)||(7059168-7059207)
chr8 (139-178)||(17656620-17656659)
chr8 (139-178)||(23567488-23567527)
chr8 (139-178)||(34633215-34633254)
chr8 (139-178)||(35301631-35301670)
chr8 (139-178)||(39657710-39657749)
chr8 (139-178)||(40022390-40022429)
chr8 (139-178)||(41451238-41451277)
chr8 (140-178)||(1209789-1209827)
chr8 (344-374)||(2750205-2750235)
chr8 (132-197)||(30413914-30413980)
chr8 (132-197)||(34633321-34633387)
chr8 (179-220)||(1671850-1671891)
chr8 (139-168)||(34343251-34343280)
chr8 (139-167)||(8439202-8439230)
chr8 (161-197)||(13526671-13526707)
chr8 (161-197)||(13616206-13616242)
chr8 (138-178)||(27506707-27506747)
chr8 (135-192)||(35302591-35302649)
[»] scaffold0097 (2 HSPs)
scaffold0097 (131-316)||(13612-13795)
scaffold0097 (343-382)||(13819-13858)
[»] chr2 (27 HSPs)
chr2 (131-316)||(20709773-20709956)
chr2 (132-311)||(18297997-18298176)
chr2 (132-310)||(25192892-25193070)
chr2 (133-228)||(14551288-14551382)
chr2 (161-247)||(4281738-4281824)
chr2 (161-247)||(25995316-25995402)
chr2 (150-228)||(4579787-4579865)
chr2 (260-310)||(4579713-4579763)
chr2 (161-222)||(5098746-5098807)
chr2 (132-193)||(2263573-2263635)
chr2 (344-382)||(4579675-4579713)
chr2 (187-247)||(43822409-43822469)
chr2 (343-382)||(20709980-20710019)
chr2 (132-197)||(7487254-7487320)
chr2 (132-197)||(15016566-15016632)
chr2 (132-197)||(39355035-39355101)
chr2 (173-222)||(36636912-36636961)
chr2 (346-382)||(18297960-18297996)
chr2 (350-382)||(25193076-25193108)
chr2 (139-178)||(1292073-1292112)
chr2 (139-178)||(7487148-7487187)
chr2 (139-178)||(12449246-12449285)
chr2 (139-178)||(16111708-16111747)
chr2 (139-178)||(39355168-39355207)
chr2 (139-178)||(41345089-41345128)
chr2 (138-178)||(19246663-19246703)
chr2 (139-167)||(44915293-44915321)
[»] chr1 (43 HSPs)
chr1 (132-321)||(18056784-18056971)
chr1 (132-310)||(22348039-22348217)
chr1 (132-321)||(45889596-45889785)
chr1 (170-310)||(179646-179786)
chr1 (132-321)||(23319961-23320158)
chr1 (130-304)||(8402204-8402371)
chr1 (168-271)||(30802432-30802535)
chr1 (132-247)||(16115851-16115966)
chr1 (161-247)||(37639371-37639457)
chr1 (161-247)||(35198131-35198217)
chr1 (132-197)||(23921898-23921963)
chr1 (343-382)||(23319903-23319942)
chr1 (132-197)||(28375464-28375530)
chr1 (131-194)||(4097911-4097975)
chr1 (130-197)||(49936937-49937005)
chr1 (343-382)||(18056990-18057029)
chr1 (343-382)||(45889804-45889843)
chr1 (344-382)||(179786-179824)
chr1 (132-197)||(11421594-11421660)
chr1 (348-382)||(22348221-22348255)
chr1 (132-197)||(24635926-24635992)
chr1 (132-197)||(25889028-25889094)
chr1 (132-197)||(34369660-34369726)
chr1 (132-197)||(50351803-50351869)
chr1 (139-178)||(14229364-14229403)
chr1 (139-178)||(16976088-16976127)
chr1 (139-178)||(18928958-18928997)
chr1 (139-178)||(23319017-23319056)
chr1 (139-178)||(23817443-23817482)
chr1 (139-178)||(24636059-24636098)
chr1 (139-178)||(29945419-29945458)
chr1 (139-178)||(32143772-32143811)
chr1 (139-178)||(43452675-43452714)
chr1 (139-178)||(48762225-48762264)
chr1 (139-178)||(49936831-49936870)
chr1 (344-382)||(8402158-8402196)
chr1 (132-197)||(18618835-18618901)
chr1 (134-222)||(51420347-51420435)
chr1 (161-197)||(31529665-31529701)
chr1 (161-197)||(33097435-33097471)
chr1 (161-197)||(44260548-44260584)
chr1 (161-197)||(44688610-44688646)
chr1 (140-168)||(46590772-46590800)
[»] chr7 (53 HSPs)
chr7 (130-321)||(30428871-30429060)
chr7 (129-319)||(46024024-46024214)
chr7 (132-310)||(46573387-46573563)
chr7 (125-308)||(15974825-15975008)
chr7 (170-271)||(33797969-33798070)
chr7 (161-247)||(5757416-5757502)
chr7 (132-231)||(12279745-12279844)
chr7 (132-228)||(48690895-48690991)
chr7 (132-228)||(28396722-28396818)
chr7 (132-231)||(12279641-12279740)
chr7 (160-247)||(32090606-32090693)
chr7 (131-222)||(48305236-48305326)
chr7 (169-228)||(48691029-48691088)
chr7 (132-197)||(25778837-25778902)
chr7 (161-223)||(44141225-44141287)
chr7 (260-310)||(28396842-28396892)
chr7 (260-310)||(48305356-48305406)
chr7 (260-310)||(48691112-48691162)
chr7 (344-382)||(28396892-28396930)
chr7 (344-382)||(48691162-48691200)
chr7 (139-178)||(763830-763869)
chr7 (135-197)||(11732647-11732710)
chr7 (132-197)||(763697-763763)
chr7 (139-177)||(12286723-12286761)
chr7 (132-197)||(16933244-16933310)
chr7 (132-197)||(16938627-16938693)
chr7 (132-197)||(30884222-30884288)
chr7 (132-197)||(31660069-31660135)
chr7 (132-197)||(41911109-41911175)
chr7 (132-197)||(46358520-46358586)
chr7 (344-382)||(48305406-48305444)
chr7 (139-178)||(11732044-11732083)
chr7 (139-178)||(16933137-16933176)
chr7 (139-178)||(16938520-16938559)
chr7 (139-178)||(24360758-24360797)
chr7 (343-382)||(30429079-30429118)
chr7 (139-178)||(30884116-30884155)
chr7 (139-178)||(31660202-31660241)
chr7 (139-178)||(35737081-35737120)
chr7 (139-178)||(41911006-41911045)
chr7 (139-178)||(44426802-44426841)
chr7 (343-382)||(46024235-46024274)
chr7 (139-178)||(46358653-46358692)
chr7 (139-178)||(47340280-47340319)
chr7 (139-178)||(48692053-48692092)
chr7 (139-178)||(48830602-48830641)
chr7 (344-382)||(15974785-15974823)
chr7 (132-197)||(20000674-20000740)
chr7 (171-201)||(27335625-27335655)
chr7 (344-382)||(46573349-46573387)
chr7 (160-197)||(32090587-32090624)
chr7 (161-197)||(34875519-34875555)
chr7 (138-178)||(46004342-46004382)
[»] chr3 (49 HSPs)
chr3 (132-310)||(51362326-51362503)
chr3 (145-310)||(52987537-52987702)
chr3 (134-302)||(50754008-50754176)
chr3 (132-310)||(7045188-7045365)
chr3 (132-304)||(8718101-8718273)
chr3 (132-304)||(9069988-9070160)
chr3 (132-300)||(19385212-19385380)
chr3 (136-269)||(16277342-16277475)
chr3 (161-321)||(39099226-39099388)
chr3 (171-247)||(23699367-23699443)
chr3 (171-247)||(23717822-23717898)
chr3 (171-247)||(23736278-23736354)
chr3 (169-231)||(17627197-17627259)
chr3 (268-307)||(31852242-31852281)
chr3 (344-382)||(8718318-8718356)
chr3 (344-382)||(9070205-9070243)
chr3 (344-382)||(51362288-51362326)
chr3 (161-247)||(23755315-23755394)
chr3 (131-197)||(3475407-3475474)
chr3 (139-178)||(26662432-26662471)
chr3 (139-178)||(26960759-26960798)
chr3 (344-382)||(7045150-7045188)
chr3 (132-197)||(9595980-9596046)
chr3 (132-197)||(19284671-19284737)
chr3 (344-382)||(19385168-19385206)
chr3 (132-197)||(46237758-46237824)
chr3 (132-197)||(47335032-47335098)
chr3 (344-382)||(52987499-52987537)
chr3 (133-197)||(33414013-33414078)
chr3 (138-178)||(50755195-50755235)
chr3 (139-178)||(3475301-3475340)
chr3 (139-178)||(6097578-6097617)
chr3 (139-178)||(8719140-8719179)
chr3 (139-178)||(9071027-9071066)
chr3 (139-178)||(9106400-9106439)
chr3 (139-178)||(9595874-9595913)
chr3 (139-178)||(10986485-10986524)
chr3 (139-178)||(19284804-19284843)
chr3 (139-178)||(30947805-30947844)
chr3 (139-178)||(34562401-34562440)
chr3 (139-178)||(54379295-54379334)
chr3 (140-178)||(2941821-2941859)
chr3 (132-197)||(26662538-26662604)
chr3 (344-382)||(50754182-50754220)
chr3 (132-168)||(1377806-1377842)
chr3 (138-178)||(27446216-27446256)
chr3 (161-197)||(47728418-47728454)
chr3 (138-178)||(47924369-47924409)
chr3 (161-197)||(53594998-53595034)
[»] chr6 (22 HSPs)
chr6 (132-310)||(33346258-33346436)
chr6 (162-302)||(24737586-24737726)
chr6 (170-302)||(877246-877378)
chr6 (132-247)||(29157226-29157341)
chr6 (132-231)||(34399641-34399740)
chr6 (158-247)||(18611215-18611304)
chr6 (132-247)||(15034920-15035040)
chr6 (132-207)||(35119239-35119310)
chr6 (135-190)||(12394387-12394442)
chr6 (344-382)||(24737542-24737580)
chr6 (131-197)||(1449541-1449608)
chr6 (131-197)||(1536896-1536963)
chr6 (132-197)||(31216662-31216728)
chr6 (344-382)||(33346220-33346258)
chr6 (127-197)||(6900799-6900869)
chr6 (139-178)||(6900936-6900975)
chr6 (139-178)||(7765407-7765446)
chr6 (139-178)||(15493307-15493346)
chr6 (139-178)||(34869957-34869996)
chr6 (139-177)||(18755665-18755703)
chr6 (132-165)||(2759826-2759859)
chr6 (350-382)||(877387-877419)
[»] scaffold0194 (2 HSPs)
scaffold0194 (132-321)||(27607-27796)
scaffold0194 (343-382)||(27815-27854)
[»] chr5 (28 HSPs)
chr5 (132-293)||(28070057-28070218)
chr5 (131-319)||(23335582-23335773)
chr5 (134-304)||(13362772-13362942)
chr5 (157-302)||(2826962-2827107)
chr5 (134-321)||(25017110-25017280)
chr5 (132-228)||(34329127-34329223)
chr5 (161-248)||(16668743-16668830)
chr5 (231-321)||(42512273-42512363)
chr5 (171-247)||(18465506-18465582)
chr5 (172-247)||(8948930-8949003)
chr5 (132-204)||(42512200-42512271)
chr5 (344-382)||(28070012-28070050)
chr5 (130-197)||(13552981-13553049)
chr5 (343-382)||(23335522-23335561)
chr5 (343-382)||(25017052-25017091)
chr5 (131-197)||(26637837-26637904)
chr5 (132-197)||(15416664-15416730)
chr5 (344-382)||(34329293-34329331)
chr5 (161-222)||(33868185-33868246)
chr5 (260-300)||(34329247-34329287)
chr5 (139-178)||(3883929-3883968)
chr5 (139-178)||(14394601-14394640)
chr5 (139-178)||(14940250-14940289)
chr5 (139-178)||(20134402-20134441)
chr5 (139-178)||(26637731-26637770)
chr5 (136-197)||(14940356-14940418)
chr5 (138-178)||(22830791-22830831)
chr5 (138-178)||(39086709-39086749)
[»] scaffold0238 (2 HSPs)
scaffold0238 (130-281)||(25148-25299)
scaffold0238 (344-382)||(25074-25112)
[»] scaffold0337 (1 HSPs)
scaffold0337 (135-231)||(7020-7116)
[»] scaffold0544 (1 HSPs)
scaffold0544 (133-222)||(10650-10739)
[»] scaffold0189 (1 HSPs)
scaffold0189 (132-194)||(11193-11255)
[»] scaffold0581 (1 HSPs)
scaffold0581 (132-197)||(8421-8487)
[»] scaffold0045 (2 HSPs)
scaffold0045 (139-178)||(33817-33856)
scaffold0045 (132-197)||(33684-33750)
[»] scaffold0571 (2 HSPs)
scaffold0571 (132-197)||(676-742)
scaffold0571 (139-178)||(547-586)
[»] scaffold0074 (1 HSPs)
scaffold0074 (139-178)||(24407-24446)
[»] scaffold0338 (1 HSPs)
scaffold0338 (138-178)||(6516-6556)


Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 87 - 321
Target Start/End: Original strand, 27764195 - 27764431
Alignment:
Q  87 gaaataagggggcctagcccctggattgagctctacggtgaacttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcac 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |    
T  27764195 gaaataagggggcctagcccctggattgagctctacggtgaacttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgc 27764294  T
Q  187 aaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  27764295 aaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaaccttatttgcttcaaacatttctctcactaaaacataa 27764394  T
Q  287 agttctcc--ctctctctctacaattttcaacattct 321  Q
    ||||||||  |||||||||| ||||||||||||||||    
T  27764395 agttctccctctctctctctccaattttcaacattct 27764431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 26447477 - 26447299
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||    
T  26447477 ggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcaca 26447378  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    || ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26447377 aattacaccaaatcaaatttcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctatacaatt 26447299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 135 - 321
Target Start/End: Complemental strand, 22181307 - 22181122
Alignment:
Q  135 aaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaac 234  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  22181307 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaac 22181208  T
Q  235 tacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||    
T  22181207 tacaccaaatcaaacttcatttgcctcaaacatttctctcactaaaacataaagcttttcctctctctctacaa-tttcaacattct 22181122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 21097140 - 21097329
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||  ||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||| | |    
T  21097140 ggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttatta 21097239  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21097240 aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaattttcaacattct 21097329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 45255975 - 45256155
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| |||    
T  45255975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttca 45256074  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagtt--ctccctctctctctacaatt 310  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |  | ||||||||||||||||||    
T  45256075 aactacatcaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctccccccctctctctctacaatt 45256155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 161 - 321
Target Start/End: Original strand, 4168387 - 4168547
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgctt 260  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||| ||||||| ||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgttt 4168486  T
Q  261 caaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||||    
T  4168487 caaacatttctctcactaaaacataaagctttcactctatctctacaattttcaacattct 4168547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 134 - 315
Target Start/End: Complemental strand, 38485733 - 38485554
Alignment:
Q  134 caaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaa 233  Q
    |||||||||||||||||||||||    |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  38485733 caaaagttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaa 38485638  T
Q  234 ctacaccaaatcaaacatcatttgcttcaaacatttctctcact--aaaacataaagttctccctctctctctacaattttcaa 315  Q
     ||||  ||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  38485637 atacattaaatcaaacttcatttgcttcaaacatttctctcactaaaaaacataaagatctccctctctctctacaattttcaa 38485554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 160 - 302
Target Start/End: Original strand, 637882 - 638024
Alignment:
Q  160 tttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||| |||||||||    
T  637882 tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaaacttcatttgct 637981  T
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctct 302  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  637982 tcaaacatttctctcactaaaacataaagctctccctctctct 638024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 36621762 - 36621627
Alignment:
Q  136 aaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaact 235  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  36621762 aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaact 36621663  T
Q  236 acaccaaatcaaacatcatttgcttcaaacatttct 271  Q
    |||||||||||||| |||||||||||||||||||||    
T  36621662 acaccaaatcaaacttcatttgcttcaaacatttct 36621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 51837155 - 51836977
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||| ||||| ||||| |||| ||  | ||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  51837155 ggcaaaagttatggtgtataagaaaatccttat-catcgagcataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctca 51837057  T
Q  232 aactacaccaaatcaaacatca-tttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51837056 aactacaccaaatcaaacttcattttacttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt 51836977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 18923351 - 18923446
Alignment:
Q  224 gcttctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||  | |||  |||||||||||||||||||||||||    
T  18923351 gcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctgtcactaaaacataaaactatcc--ctctctctacaattttcaacattct 18923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 50563764 - 50563679
Alignment:
Q  162 tatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||||||||    
T  50563764 tatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaa 50563679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 50643742 - 50643808
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  50643742 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagat 50643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27764109 - 27764162
Alignment:
Q  1 taatttttatcatttgtggttacatttatagaagagttcatctatatttgtgtg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27764109 taatttttatcatttgtggttacatttatagaagagttcatctatatttgtgtg 27764162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  134 caaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||| |||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  29826669 caaaagttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 1729678 - 1729604
Alignment:
Q  135 aaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacac 208  Q
    |||||||||||||||||||  | | |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 6386567 - 6386516
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  6386567 tgcataaacacttcacaaccatcagatttagtggacacgtgtaataatccta 6386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 4168566 - 4168605
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4168566 ctcagatgagtcttcatctcttccggccacacatgatgat 4168605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 21097348 - 21097387
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21097348 ctcagatgagtcttcatctcttccggccacacatgatgat 21097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 27764454 - 27764492
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27764454 tcagatgagtcttcatctcttccggccacacatgatgat 27764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 51836977 - 51836939
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51836977 tcagatgagtcttcatctcttccggccacacatgatgat 51836939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 30597697 - 30597765
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  30597697 ttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 48077861 - 48077817
Alignment:
Q  200 agtgtacacgtgtaataatcctacgcttctcaaactacaccaaat 244  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  48077861 agtgtacatgtgtaataatcctaggcttctcaaactacaccaaat 48077817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 18923465 - 18923504
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  18923465 ctcagatgagtcttcatctcttccgaccacacatgatgat 18923504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 51921332 - 51921265
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  51921332 tggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 51921265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 1621875 - 1621941
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 1621941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 10472497 - 10472563
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| ||||||||||| ||||||||||||||||    
T  10472497 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagat 10472563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 13635791 - 13635725
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  13635791 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 13635725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 15051202 - 15051136
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  15051202 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15051136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 26447299 - 26447261
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26447299 tcagatgagtcctcatctcttccggccacacatgatgat 26447261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 26578255 - 26578189
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||| ||||||||||||  | | |||||||||  ||||||||||||||||||||||||||||    
T  26578255 ggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagat 26578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 36011843 - 36011909
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  36011843 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 36011909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 45256155 - 45256193
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  45256155 tcagatgagtcttcatctcttccggccacacaggatgat 45256193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 46672439 - 46672505
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  46672439 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 49492578 - 49492512
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  49492578 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49492512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 638032 - 638068
Alignment:
Q  346 agatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||| ||||||    
T  638032 agatgagtcttcatctcttccggccacacacgatgat 638068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 11785972 - 11786040
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||   | | | |||||||| |||||||||||| |||||||||||||||    
T  11785972 ttggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagat 11786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 11798139 - 11798207
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||   | | | |||||||| |||||||||||| |||||||||||||||    
T  11798139 ttggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagat 11798207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 48077910 - 48077862
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaaca 180  Q
    ||||||||||||  |||||||||||||| |||||||| |||||||||||    
T  48077910 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaaca 48077862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 49492405 - 49492445
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  49492405 agttatggtgcataaggaaatccttatgcaccgtgcataaa 49492445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 9813187 - 9813148
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  9813187 gttatggtgcataaggaaatctttatgcaccctgcataaa 9813148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 10473690 - 10473651
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  10473690 gttatggtgcataaggaaatccttatgcaccgtgcataaa 10473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 11786146 - 11786107
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  11786146 gttatggtgcataaggaaatccttatgcaccgtgcataaa 11786107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 11798313 - 11798274
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  11798313 gttatggtgcataaggaaatccttatgcaccgtgcataaa 11798274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 13635619 - 13635658
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  13635619 gttatggtgcataaggaaatccttatgcaccgtgcataaa 13635658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 15051030 - 15051069
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  15051030 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15051069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 22180208 - 22180247
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  22180208 gttatggtgcataaggaaatccttatgcaccgtgcataaa 22180247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 22181103 - 22181064
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  22181103 ctcaaatgagttttcatctcttccggccacacatgatgat 22181064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 26577263 - 26577302
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  26577263 gttatggtgcataaggaaatccttatgcaccgtgcataaa 26577302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 30358879 - 30358840
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  30358879 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 30597871 - 30597832
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  30597871 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 45256937 - 45256898
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  45256937 gttatggtgcataaggaaatccttatgcaccgtgcataaa 45256898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 49425951 - 49425990
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  49425951 gttatggtgcataaggaaatccttatgcaccgtgcataaa 49425990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 50644712 - 50644673
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  50644712 gttatggtgcataaggaaatccttatgcaccgtgcataaa 50644673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 53865066 - 53865105
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  53865066 gttatgatgcataaggaaatctttatgcactctgcataaa 53865105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 639035 - 638997
Alignment:
Q  140 ttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaa 638997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 38485529 - 38485496
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacat 376  Q
    |||| |||||||||||||||||||||||||||||    
T  38485529 ctcatatgagtcttcatctcttccggccacacat 38485496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 8157332 - 8157292
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  8157332 agttatggtgcataaggaaatccttatgcaccctgcataaa 8157292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 16475062 - 16475034
Alignment:
Q  139 gttatggtgcataaggaaatctttatgca 167  Q
    |||||||||||||||||||||||||||||    
T  16475062 gttatggtgcataaggaaatctttatgca 16475034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 25574164 - 25574128
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  25574164 ttatgcaccctgcataaacacttcacaaccatcagat 25574128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 33883526 - 33883486
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  33883526 agttatggtgcataaggaaatcattatgcaccctgcataaa 33883486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 6e-84; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 39021975 - 39022164
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctca 39022074  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39022075 aactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaattttcaacattct 39022164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 130 - 321
Target Start/End: Complemental strand, 32987512 - 32987323
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttct 229  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32987512 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttct 32987413  T
Q  230 caaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||    
T  32987412 caaactacaccaaatcaaacttcatttgcttcaaacatttctctaactaaaacataaagctctccctct--ctctacaattttcaacattct 32987323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 127 - 310
Target Start/End: Original strand, 7058109 - 7058292
Alignment:
Q  127 aacttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgct 226  Q
    |||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  7058109 aactgggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagact 7058208  T
Q  227 tctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  7058209 tctcaaactacaccaaatcaaacttcatttgcttcaaacacttctctcactaaaacataaagctctccctctctctctacaatt 7058292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 136 - 310
Target Start/End: Complemental strand, 4836762 - 4836588
Alignment:
Q  136 aaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaact 235  Q
    ||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  4836762 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact 4836663  T
Q  236 acaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  4836662 acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaatt 4836588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 136 - 310
Target Start/End: Complemental strand, 4842207 - 4842033
Alignment:
Q  136 aaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaact 235  Q
    ||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  4842207 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact 4842108  T
Q  236 acaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  4842107 acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaatt 4842033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 132 - 321
Target Start/End: Complemental strand, 15260917 - 15260727
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 230  Q
    ||||||||||||||||||||||||  | | |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| | |||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctc 15260818  T
Q  231 aaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  15260817 aaactacaccaaatcaaacttcatttgcttcaaatatttctctcactaaaatataaaactctccctctctctctacaattttcaacattct 15260727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 161 - 310
Target Start/End: Original strand, 8550533 - 8550682
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgctt 260  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaaacttcatttgctt 8550632  T
Q  261 caaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8550633 caaacatttctctcactaaaacataaagttctccctctttctctacaatt 8550682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 7614097 - 7614207
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgctt 260  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  7614097 ttatgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaacttcatttgctt 7614196  T
Q  261 caaacatttct 271  Q
    |||||||||||    
T  7614197 caaacatttct 7614207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 1208708 - 1208805
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  1208708 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatcctaggcttc 1208805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 15181820 - 15181906
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  15181820 ttatgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaa 15181906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 2750101 - 2750205
Alignment:
Q  208 cgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccct--ctctctcta 305  Q
    |||||||||||| ||  ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| | |||||||  |||||||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaaacttcatttactttaaacatttctctcactaaaacataatgctctccctcactctctcta 2750200  T
Q  306 caatt 310  Q
    |||||    
T  2750201 caatt 2750205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 42433701 - 42433766
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  42433701 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 42433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 1208829 - 1208871
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctct 302  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1208829 tcaaacatttctctcactaaaacataaagctctccctctctct 1208871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 4836588 - 4836550
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4836588 tcagatgagtcttcatctcttccggccacacatgatgat 4836550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 4842033 - 4841995
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4842033 tcagatgagtcttcatctcttccggccacacatgatgat 4841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 39022186 - 39022222
Alignment:
Q  346 agatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||    
T  39022186 agatgagtcttcatctcttccggccacacatgatgat 39022222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 15260708 - 15260669
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15260708 ctcagatgagtcttcatctcttccggccacatatgatgat 15260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 30414086 - 30414047
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  30414086 gttatggtgcataaggaaatctttatgcaccgtgcataaa 30414047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 40012247 - 40012180
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatct 199  Q
    ||||||||||||||||||||||||  || ||||||||  |||||||| |||| ||||||||| |||||    
T  40012247 ggcaaaagttatggtgcataaggatttccttatgcaccatgcataaagactttacaaccatcggatct 40012180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 41099181 - 41099248
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  41099181 tggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 41099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 1208877 - 1208915
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1208877 tcagatgagtcttcatctcttgcggccacacatgatgat 1208915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 7058292 - 7058330
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  7058292 tcagatgagtcttcatctctttcggccacacatgatgat 7058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 8550682 - 8550720
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8550682 tcagatgagtcttcatctcttacggccacacatgatgat 8550720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 10237354 - 10237420
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  10237354 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 10237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 19784271 - 19784337
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 19784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 382
Target Start/End: Complemental strand, 39658426 - 39658392
Alignment:
Q  348 atgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||    
T  39658426 atgagtcttcatctcttccggccacacatgatgat 39658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 43690640 - 43690706
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  43690640 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 43690706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 185883 - 185922
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  185883 gttatggtgcataaggaaatccttatgcactctgcataaa 185922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 1149917 - 1149956
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  1149917 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1149956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 4835520 - 4835559
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  4835520 gttatggtgcataaggaaatccttatgcaccgtgcataaa 4835559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 7059207 - 7059168
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  7059207 gttatggtgcataaggaaatcattatgcaccgtgcataaa 7059168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 17656620 - 17656659
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  17656620 gttatggtgcataaggaaatccttatgcactctgcataaa 17656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 23567488 - 23567527
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  23567488 gttatggtgcataaggaaatccttatgcactctgcataaa 23567527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 34633215 - 34633254
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  34633215 gttatggtgcataaggaaatccttatgcaccgtgcataaa 34633254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 35301631 - 35301670
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  35301631 gttatggtgcataaggaaatccttatgcaccgtgcataaa 35301670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 39657710 - 39657749
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  39657710 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39657749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 40022390 - 40022429
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||||||| |||||    
T  40022390 gttatggtgcataaggaaatccttatgcactgtgtataaa 40022429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 41451277 - 41451238
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  41451277 gttatggtgtataaggaaatccttatgcactgtgcataaa 41451238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 1209827 - 1209789
Alignment:
Q  140 ttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaa 1209789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 374
Target Start/End: Original strand, 2750205 - 2750235
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacac 374  Q
    |||||||||||||||||||||||||||||||    
T  2750205 tcagatgagtcttcatctcttccggccacac 2750235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 30413914 - 30413980
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||| ||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  30413914 ggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 30413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 34633387 - 34633321
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||| ||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  34633387 ggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 34633321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 1671850 - 1671891
Alignment:
Q  179 cacttcacaaccatcagatctagtgtacacgtgtaataatcc 220  Q
    |||||||||| |||||||| ||||||| ||||||||||||||    
T  1671850 cacttcacaatcatcagatttagtgtatacgtgtaataatcc 1671891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 34343251 - 34343280
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcac 168  Q
    ||||||||||||||||||||||||||||||    
T  34343251 gttatggtgcataaggaaatctttatgcac 34343280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 8439230 - 8439202
Alignment:
Q  139 gttatggtgcataaggaaatctttatgca 167  Q
    |||||||||||||||||||||||||||||    
T  8439230 gttatggtgcataaggaaatctttatgca 8439202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 13526707 - 13526671
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  13526707 ttatgtactctgcataaacacttcacaaccatcagat 13526671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 13616242 - 13616206
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  13616242 ttatgtactctgcataaacacttcacaaccatcagat 13616206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 27506707 - 27506747
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  27506707 agttatggtgcataaggaaatccttatgcaccctgcataaa 27506747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  135 aaaagttatggtgcataaggaaatctt--tatgcactgtgcataaacacttcacaaccat 192  Q
    ||||||||||||||||| ||| || ||  ||||||| |||||||||||||||||||||||    
T  35302649 aaaagttatggtgcata-ggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 131 - 316
Target Start/End: Original strand, 13612 - 13795
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 230  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13612 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctc 13711  T
Q  231 aaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaac 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  13712 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctcc--ctctctctacaattttcaac 13795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 13819 - 13858
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13819 ctcagatgagtcttcatctcttccggtcacacatgatgat 13858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 131 - 316
Target Start/End: Original strand, 20709773 - 20709956
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 230  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20709773 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctc 20709872  T
Q  231 aaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaac 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  20709873 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctcc--ctctctctacaattttcaac 20709956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 132 - 311
Target Start/End: Complemental strand, 18298176 - 18297997
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 18298077  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattt 311  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||||    
T  18298076 aactacaccaaatcaaacttcatttgcttcaagcgtttctctcactaaaacataaatctctccctctctctctacaattt 18297997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 25192892 - 25193070
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctca 25192991  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25192992 aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt 25193070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 14551382 - 14551288
Alignment:
Q  133 gcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  14551382 gcaaaagttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttc 14551288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 4281824 - 4281738
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  4281824 ttatgtactctgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaa 4281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 25995316 - 25995402
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  25995316 ttatgcactctgcataaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaa 25995402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 4579865 - 4579787
Alignment:
Q  150 taaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    |||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  4579865 taaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatcttatgcttc 4579787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 4579763 - 4579713
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4579763 tcaaacatttctctcactaaaacataaagctctccctctctctctacaatt 4579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 5098746 - 5098807
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||  |||||||||||||||||||||||| || || |||||||||||||||||||||    
T  5098746 ttatgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataatccta 5098807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 2263573 - 2263635
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatc 193  Q
    ||||||||||||||||||||||  | | |||||||||| ||||||||||||||||||||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatc 2263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 4579713 - 4579675
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4579713 tcagatgagtcttcatctcttccggccacacatgatgat 4579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 43822409 - 43822469
Alignment:
Q  187 aaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||||||||||||||||| ||||||||| | |||| ||| ||||| |||||||    
T  43822409 aaccatcagatctagtgtacacgtgtgataatcctaggtttcttaaattacacaaaatcaa 43822469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 20709980 - 20710019
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20709980 ctcagatgagtcttcatctcttccggtcacacatgatgat 20710019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 7487320 - 7487254
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  7487320 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 7487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 15016632 - 15016566
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15016566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 39355035 - 39355101
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 39355101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 36636961 - 36636912
Alignment:
Q  173 cataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||||||||||||||||||| |  | |||||||||||||||||||    
T  36636961 cataaacacttcacaaccatcagatttgttttacacgtgtaataatccta 36636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 18297996 - 18297960
Alignment:
Q  346 agatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||| ||||||||||||||    
T  18297996 agatgagtcttcatctcttccgaccacacatgatgat 18297960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 25193076 - 25193108
Alignment:
Q  350 gagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||    
T  25193076 gagtcttcatctcttccggccacacatgatgat 25193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 1292073 - 1292112
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  1292073 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1292112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 7487148 - 7487187
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  7487148 gttatggtgcataaggaaatccttatgcaccgtgcataaa 7487187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 12449285 - 12449246
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  12449285 gttatggtgcataaggaaatctttatgcaccttgcataaa 12449246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 16111747 - 16111708
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  16111747 gttatggtgcataaggaaatctttatgcaccctgcataaa 16111708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 39355207 - 39355168
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  39355207 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39355168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 41345089 - 41345128
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  41345089 gttatggtgcataaggaaatccttatgcaccgtgcataaa 41345128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 19246663 - 19246703
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  19246663 agttatggtgcataaggaaatccttatgcaccctgcataaa 19246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 44915293 - 44915321
Alignment:
Q  139 gttatggtgcataaggaaatctttatgca 167  Q
    |||||||||||||||||||||||||||||    
T  44915293 gttatggtgcataaggaaatctttatgca 44915321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 18056784 - 18056971
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 18056883  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  18056884 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaaactctcc--ctctctctacaattttcaacattct 18056971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 132 - 310
Target Start/End: Original strand, 22348039 - 22348217
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctca 22348138  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22348139 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt 22348217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 45889596 - 45889785
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||| ||||||||||||||||||  |||| ||| ||||||||||| || |||||||||||||||||| |||| ||||||||||| || ||||||||    
T  45889596 ggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttctca 45889695  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45889696 aactacaccaaatcaaatttcatttccttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaatattct 45889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 170 - 310
Target Start/End: Original strand, 179646 - 179786
Alignment:
Q  170 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacattt 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  179646 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaaacttcatttgcttaaaacattt 179745  T
Q  270 ctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  179746 ctctcactaaaacataaagctctccctctctctctacaatt 179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 132 - 321
Target Start/End: Complemental strand, 23320158 - 23319961
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactg--------tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctac 223  Q
    |||||||||||||||||||||||||||| |||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23320158 ggcaaaagttatggtgcataaggaaatccttatgctcttaggtatcatgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctag 23320059  T
Q  224 gcttctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
     ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||||| ||||||| |||||||| |||||    
T  23320058 acttctcaaactacaccaaatcaaacttcatttgctttaaacatttctctcactaaaacataaagctatccctctttctctactattttcaaaattct 23319961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 130 - 304
Target Start/End: Complemental strand, 8402371 - 8402204
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttct 229  Q
    |||||||||||||||||| |||||||||| ||||||||       ||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||    
T  8402371 ttggcaaaagttatggtggataaggaaatttttatgca-------taaacacttcataaccatcagatctagtgtacacatgtaataatcctaggtttct 8402279  T
Q  230 caaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctct 304  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  8402278 caaactaaaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataaagctctctctctctctct 8402204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 30802432 - 30802535
Alignment:
Q  168 ctgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacat 267  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||    
T  30802432 ctgttcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatat 30802531  T
Q  268 ttct 271  Q
    ||||    
T  30802532 ttct 30802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 16115851 - 16115966
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| |  ||||| |    
T  16115851 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatccaagacttctta 16115950  T
Q  232 aactacaccaaatcaa 247  Q
    ||||||||||||||||    
T  16115951 aactacaccaaatcaa 16115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 37639371 - 37639457
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||    
T  37639371 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaa 37639457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 35198217 - 35198131
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||    
T  35198217 ttatgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaa 35198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 23921963 - 23921898
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||| ||||||||||||||| |||||||  |||||||| ||||||| |||||||||||    
T  23921963 ggcaaaagttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagat 23921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 23319942 - 23319903
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23319942 ctcagatgagtcttcatctcttccggccacacatgatgat 23319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 28375464 - 28375530
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | |||||||||| |||||||||||| |||||||||||||||    
T  28375464 ggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagat 28375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 4097975 - 4097911
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatca 194  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||||||||||||||||    
T  4097975 tggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatca 4097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 49937005 - 49936937
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  49937005 ttggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49936937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 18056990 - 18057029
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  18056990 ctcagatgagtctttatctcttccggccacacatgatgat 18057029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 45889804 - 45889843
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  45889804 ctcagatgagtcttcatctcttccggccacaaatgatgat 45889843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 179786 - 179824
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  179786 tcagatgagtcttcatctctttcggccacacatgatgat 179824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 11421594 - 11421660
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||   | | | |||||||| ||||||||||||||||||||||||||||    
T  11421594 ggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagat 11421660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 382
Target Start/End: Original strand, 22348221 - 22348255
Alignment:
Q  348 atgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||    
T  22348221 atgagtcttcatctcttccggccacacatgatgat 22348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 24635926 - 24635992
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 24635992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 25889094 - 25889028
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  25889094 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 25889028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 34369660 - 34369726
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatct-ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||| ||||||||||||||  | | | |||||||| ||||||||||||||||||||||||||||    
T  34369660 ggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagat 34369726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 50351803 - 50351869
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 50351869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 14229403 - 14229364
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  14229403 gttatggtgcataaggaaatctttatgcaccctgcataaa 14229364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 16976127 - 16976088
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  16976127 gttatggtgcataaggaaatccttatgcaccgtgcataaa 16976088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 18928997 - 18928958
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  18928997 gttatggtgcataaggaaatctttatgcaccctgcataaa 18928958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 23319017 - 23319056
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  23319017 gttatggtggataaggaaatccttatgcactgtgcataaa 23319056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 23817482 - 23817443
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  23817482 gttatggtgcataaggaaatccttatgcaccgtgcataaa 23817443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 24636098 - 24636059
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  24636098 gttatggtgcataaggaaatccttatgcaccgtgcataaa 24636059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 29945458 - 29945419
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  29945458 gttatggtgcataaggaaatccttatgcactctgcataaa 29945419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 32143811 - 32143772
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  32143811 gttatggtgcataaggaaatccttatgcactctgcataaa 32143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 43452714 - 43452675
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  43452714 gttatggtgcataaggaaatccttatgcaccgtgcataaa 43452675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 48762225 - 48762264
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  48762225 gttatggtgcataaggaaatccttatgcaccgtgcataaa 48762264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 49936831 - 49936870
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  49936831 gttatggtgcataaggaaatccttatgcaccgtgcataaa 49936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 8402196 - 8402158
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  8402196 tcagatgagtcttcatcttttccggccaaacatgatgat 8402158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 18618835 - 18618901
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||   | | | |||||||| |||||||||||| |||||||||||||||    
T  18618835 ggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagat 18618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 51420347 - 51420435
Alignment:
Q  134 caaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||||  ||||||||  ||| |||||||||   |||||||||| |||||||||||||||| || | |||||| ||||||||||||    
T  51420347 caaaagttattatgcataagtcaattctttatgcatcctgcataaaca-ttcacaaccatcagatttattatacacgagtaataatccta 51420435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 31529701 - 31529665
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  31529701 ttatgcaccatgcataaacacttcacaaccatcagat 31529665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 33097435 - 33097471
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  33097435 ttatgcaccctgcataaacacttcacaaccatcagat 33097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 44260548 - 44260584
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  44260548 ttatgcaccctgcataaacacttcacaaccatcagat 44260584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 44688646 - 44688610
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  44688646 ttatgcacgctgcataaacacttcacaaccatcagat 44688610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 46590800 - 46590772
Alignment:
Q  140 ttatggtgcataaggaaatctttatgcac 168  Q
    |||||||||||||||||||||||||||||    
T  46590800 ttatggtgcataaggaaatctttatgcac 46590772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 5e-81; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 30428871 - 30429060
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttct 229  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30428871 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttct 30428970  T
Q  230 caaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  30428971 caaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaag--ctccccctctctctacaattttcaacattct 30429060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 129 - 319
Target Start/End: Original strand, 46024024 - 46024214
Alignment:
Q  129 cttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  46024024 cttggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttc 46024123  T
Q  229 tcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacatt 319  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46024124 tcaaactacattaaatcaaacttcatttgcttcaaatatttctctcactaaaacataaagttctccctctatctctacaattttcaacatt 46024214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 46573563 - 46573387
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||| |||||||||   |  |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46573563 ggcaaaagttatgatgcataaggt--ttcttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 46573466  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  46573465 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctatctacaatt 46573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 125 - 308
Target Start/End: Complemental strand, 15975008 - 15974825
Alignment:
Q  125 tgaacttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacg 224  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||||| |||||||||| || |    
T  15975008 tgaaattggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttagg 15974909  T
Q  225 cttctcaaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaa 308  Q
    ||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| | |||||| |||||    
T  15974908 cttatcaaagtacaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataaagctctctccctctctgtacaa 15974825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 33797969 - 33798070
Alignment:
Q  170 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacattt 269  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||    
T  33797969 gtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaaacttcatttgcttcaaacattt 33798068  T
Q  270 ct 271  Q
    ||    
T  33798069 ct 33798070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 5757416 - 5757502
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 5757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 12279745 - 12279844
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||| |||||| || |||||    
T  12279745 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaatgatcctaggcctctca 12279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 48690895 - 48690991
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  48690895 ggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatcataggcttc 48690991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 28396722 - 28396818
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||| | |||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| | |||||||||||| |||||    
T  28396722 ggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatcctaggcttc 28396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 12279641 - 12279740
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||| |||||||||||||||| |||||| || |||||    
T  12279641 ggcaaaagttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaatgatcctaggcctctca 12279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 32090606 - 32090693
Alignment:
Q  160 tttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||  |||||||||| |||| |||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  32090606 tttatgcaccctgcataaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaa 32090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 48305236 - 48305326
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    |||||||||||||||||||||||||  || |||||||| |||||||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  48305236 tggcaaaagttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataatccta 48305326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 48691029 - 48691088
Alignment:
Q  169 tgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48691029 tgtgcatagacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 48691088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 25778837 - 25778902
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||||    
T  25778837 ggcaaaagttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagat 25778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 44141287 - 44141225
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctac 223  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  44141287 ttatgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataatcctac 44141225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 28396842 - 28396892
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  28396842 tcaaacatttctctcaataaaacataaagttctccctctctctctgcaatt 28396892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 48305356 - 48305406
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  48305356 tcaaacatttctctcaataaaacataaagctctccctctctctctacaatt 48305406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 48691112 - 48691162
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  48691112 tcaaaaatttctctcactaaaacataaagctctccctctctctctacaatt 48691162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 28396892 - 28396930
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28396892 tcagatgagtcttcatctcttccggccacacatgatgat 28396930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 48691162 - 48691200
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48691162 tcagatgagtcttcatctcttccggccacacatgatgat 48691200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 763869 - 763830
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  763869 gttatggtgcataaggaaatccttatgcactgtgcataaa 763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 11732710 - 11732647
Alignment:
Q  135 aaaagttatggtgcataaggaaatct-ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||  | | | |||||||||||||||||||||||||||||||| ||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccattagat 11732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 763697 - 763763
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  763697 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagat 763763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 12286761 - 12286723
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataa 177  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  12286761 gttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 16933310 - 16933244
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  16933310 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 16933244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 16938693 - 16938627
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  16938693 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 16938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 30884288 - 30884222
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  30884288 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30884222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 31660069 - 31660135
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  31660069 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 31660135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 41911175 - 41911109
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 41911109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 46358520 - 46358586
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  46358520 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46358586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 48305406 - 48305444
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  48305406 tcagatgagtcttcatcacttccggccacacatgatgat 48305444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 11732044 - 11732083
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  11732044 gttatggtgcataaggaaatccttatgcaccgtgcataaa 11732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 16933137 - 16933176
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  16933137 gttatggtgcataaggaaatccttatgcaccgtgcataaa 16933176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 16938520 - 16938559
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  16938520 gttatggtgcataaggaaatccttatgcaccgtgcataaa 16938559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 24360797 - 24360758
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  24360797 gttatggtgcataaggaaatatttatgcaccgtgcataaa 24360758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 30429079 - 30429118
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  30429079 ctcagacgagtcttcatctcttccggccatacatgatgat 30429118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 30884116 - 30884155
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  30884116 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30884155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 31660241 - 31660202
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  31660241 gttatggtgcataaggaaatccttatgcaccgtgcataaa 31660202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 35737120 - 35737081
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  35737120 gttatggtgcataaggaaatccttatgcaccgtgcataaa 35737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 41911006 - 41911045
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  41911006 gttatggtgcataaggaaatccttatgcaccgtgcataaa 41911045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 44426841 - 44426802
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  44426841 gttatggtgcataaggaaatctttatgcaccctgcataaa 44426802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 46024235 - 46024274
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  46024235 ctcagattagtcttcatctcttccgaccacacatgatgat 46024274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 46358692 - 46358653
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  46358692 gttatggtgcataaggaaatccttatgcaccgtgcataaa 46358653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 47340319 - 47340280
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  47340319 gttatggtgcataaggaaatccttatgcaccgtgcataaa 47340280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 48692092 - 48692053
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  48692092 gttatggtgcataaggaaatccttatgcaccgtgcataaa 48692053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 48830641 - 48830602
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  48830641 gttatggtgcataaggaaatccttatgcaccgtgcataaa 48830602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 15974823 - 15974785
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  15974823 tcagatgagtcttcatctcttccgatcacacatgatgat 15974785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 20000740 - 20000674
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatct-ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | |   |||||||| |||||||||||| |||||||||||||||    
T  20000740 ggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagat 20000674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 27335655 - 27335625
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctag 201  Q
    |||||||||||||||||||||||||||||||    
T  27335655 tgcataaacacttcacaaccatcagatctag 27335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 46573387 - 46573349
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||| || |||||||||||||    
T  46573387 tcagatgagtcttcatctcttcagggcacacatgatgat 46573349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 32090624 - 32090587
Alignment:
Q  160 tttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  32090624 tttatgcagggtgcataaacacttcacaaccatcagat 32090587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 34875519 - 34875555
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  34875519 ttatgcaccctgcataaacacttcacaaccatcagat 34875555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 46004342 - 46004382
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  46004342 agttatggtgcataacgaaatccttatgcactctgcataaa 46004382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 2e-77; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 51362503 - 51362326
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  51362503 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctca 51362404  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  51362403 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaactt-tccctctctctctacaatt 51362326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 145 - 310
Target Start/End: Complemental strand, 52987702 - 52987537
Alignment:
Q  145 gtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaat 244  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaat 52987603  T
Q  245 caaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  52987602 caaacttcatttgcttcaaatatttctctcactaaaacataaagctctccctctctctctacaatt 52987537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 134 - 302
Target Start/End: Original strand, 50754008 - 50754176
Alignment:
Q  134 caaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaa 233  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50754008 caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaa 50754107  T
Q  234 ctacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctct 302  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  50754108 ctacaccaaatcaaacttcatttgattcaaacacttctctcactaaaacataaagctctccctctctct 50754176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 7045365 - 7045188
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctca 7045266  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
     |||||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7045265 gactacatcaaatcaaac-ttatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt 7045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 132 - 304
Target Start/End: Original strand, 8718101 - 8718273
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |    
T  8718101 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta 8718200  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctct 304  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| | |||||||||||||    
T  8718201 aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagctttccctctctctct 8718273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 132 - 304
Target Start/End: Original strand, 9069988 - 9070160
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |    
T  9069988 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta 9070087  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctct 304  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| | |||||||||||||    
T  9070088 aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagctttccctctctctct 9070160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 132 - 300
Target Start/End: Complemental strand, 19385380 - 19385212
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttctca 19385281  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctct 300  Q
    ||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  19385280 aactacatcaaatcaaacttcatttgcttcaatcatttccctcactaaaacataaaactctccctctct 19385212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 16277475 - 16277342
Alignment:
Q  136 aaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaact 235  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16277475 aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaact 16277376  T
Q  236 acaccaaatcaaacatcatttgcttcaaacattt 269  Q
    |||||||||||||| ||||||| |||||||||||    
T  16277375 acaccaaatcaaacttcatttgtttcaaacattt 16277342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 161 - 321
Target Start/End: Original strand, 39099226 - 39099388
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgctt 260  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaaacttcatttgttt 39099325  T
Q  261 caaacatttctctcactaaaacataaagttctccctctc--tctctacaattttcaacattct 321  Q
     ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  39099326 aaaacatttctctcactaaaacataaagctctccctctctttctctacaattttcaacattct 39099388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 23699367 - 23699443
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  23699367 tgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 23717822 - 23717898
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  23717822 tgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23717898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 23736278 - 23736354
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  23736278 tgcataaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 17627259 - 17627197
Alignment:
Q  169 tgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  17627259 tgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggtttctca 17627197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 31852242 - 31852281
Alignment:
Q  268 ttctctcactaaaacataaagttctccctctctctctaca 307  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31852242 ttctctcactaaaacataaagttctccctctctctctaca 31852281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 8718318 - 8718356
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8718318 tcagatgagtcttcatctcttccggccacacatgatgat 8718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 9070205 - 9070243
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9070205 tcagatgagtcttcatctcttccggccacacatgatgat 9070243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 51362326 - 51362288
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51362326 tcagatgagtcttcatctcttccggccacacatgatgat 51362288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 23755315 - 23755394
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||  ||||||||||||||||||||       ||| ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  23755315 ttatgcaccctgcataaacacttcacaacc-------ctaatgtacacgtgtaataatcctaggcttctcaaattacatcaaatcaa 23755394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 3475474 - 3475407
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  3475474 tggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 3475407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 26662432 - 26662471
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  26662432 gttatggtgcataaggaaatccttatgcactgtgcataaa 26662471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 26960798 - 26960759
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  26960798 gttatggtgcataaggaaatctttatgcaccgtgcataaa 26960759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 7045188 - 7045150
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7045188 tcagatgagtcttcatctcttccagccacacatgatgat 7045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 9596046 - 9595980
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagat 9595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 19284671 - 19284737
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 19284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 19385206 - 19385168
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19385206 tcagatgagtcttcatctcttccggccacagatgatgat 19385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 46237824 - 46237758
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  46237824 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 46237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 47335032 - 47335098
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 47335098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 52987537 - 52987499
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  52987537 tcagatgagtcttcatctctttcggccacacatgatgat 52987499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 33414078 - 33414013
Alignment:
Q  133 gcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 33414013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 50755235 - 50755195
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  50755235 agttatggtgcataaggaaatccttatgcaccgtgcataaa 50755195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 3475301 - 3475340
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  3475301 gttatggtgcataaggaaatccttatgcaccgtgcataaa 3475340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 6097578 - 6097617
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  6097578 gttatggtgcataaggaaatccttatgcaccgtgcataaa 6097617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 8719179 - 8719140
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  8719179 gttatggtgcataaggaaatccttatgcaccgtgcataaa 8719140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 9071066 - 9071027
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  9071066 gttatggtgcataaggaaatccttatgcaccgtgcataaa 9071027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 9106439 - 9106400
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  9106439 gttatggtgcataaggaaatccttatgcaccgtgcataaa 9106400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 9595874 - 9595913
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  9595874 gttatggtgcataaggaaatccttatgcaccgtgcataaa 9595913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 10986524 - 10986485
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  10986524 gttatggtgcataaggaaatccttatgcaccgtgcataaa 10986485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 19284843 - 19284804
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  19284843 gttatggtgcataaggaaatccttatgcaccgtgcataaa 19284804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 30947805 - 30947844
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  30947805 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 34562401 - 34562440
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  34562401 gttatggtgcataaggaaatccttatgcaccgtgcataaa 34562440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 54379334 - 54379295
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  54379334 gttatggtgcataaggaaatccttatgcaccgtgcataaa 54379295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 2941821 - 2941859
Alignment:
Q  140 ttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcaccgtgcataaa 2941859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 26662604 - 26662538
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||| |||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  26662604 ggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 26662538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 50754182 - 50754220
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  50754182 tcagatgagtcttaatctcttccgaccacacatgatgat 50754220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 1377842 - 1377806
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcac 168  Q
    ||||||||||||||||||||||||  |||||||||||    
T  1377842 ggcaaaagttatggtgcataaggatttctttatgcac 1377806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 27446256 - 27446216
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  27446256 agttatggtgcataaggaaatccttatgcaccttgcataaa 27446216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 47728418 - 47728454
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  47728418 ttatgcaccctgcataaacacttcacaaccatcagat 47728454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 47924409 - 47924369
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  47924409 agttatggtgcataaggaaatccttatgcaccctgcataaa 47924369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 53594998 - 53595034
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||  |||||||||||||||||||||||||||    
T  53594998 ttatgcaccctgcataaacacttcacaaccatcagat 53595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 132 - 310
Target Start/End: Complemental strand, 33346436 - 33346258
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctca 33346337  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 310  Q
    ||||||  |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33346336 aactacgtcaaatcaaacttcgtttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 33346258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 162 - 302
Target Start/End: Complemental strand, 24737726 - 24737586
Alignment:
Q  162 tatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttc 261  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgcttc 24737627  T
Q  262 aaacatttctctcactaaaacataaagttctccctctctct 302  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24737626 aaacatttctctcactaaaacataaaactctccctctctct 24737586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 877246 - 877378
Alignment:
Q  170 gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcatttgcttcaaacattt 269  Q
    ||||||||||||||||||||||| |||||  |||||||||| |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||    
T  877246 gtgcataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaaacttcatttgcttcaaacattt 877345  T
Q  270 ctctcactaaaacataaagttctccctctctct 302  Q
    |||||||||||||| |||| |||||||||||||    
T  877346 ctctcactaaaacaaaaagctctccctctctct 877378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 29157226 - 29157341
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||  |||| ||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  29157226 ggcaaaagttatcatgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttctca 29157325  T
Q  232 aactacaccaaatcaa 247  Q
    ||||||||||||||||    
T  29157326 aactacaccaaatcaa 29157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 34399641 - 34399740
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatcctaggcttctca 34399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 18611215 - 18611304
Alignment:
Q  158 tctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  18611215 tctttatgcactctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaa 18611304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 15035040 - 15034920
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgct----- 226  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||   |||||||||||||||||||||||||| ||||||||||| || |||         
T  15035040 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttctcc 15034941  T
Q  227 tctcaaactacaccaaatcaa 247  Q
    |||||||||||||||||||||    
T  15034940 tctcaaactacaccaaatcaa 15034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 35119239 - 35119310
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtaca 207  Q
    ||||||||||||||||||||||    || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  35119239 ggcaaaagttatggtgcataag----tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  135 aaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaacc 190  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  12394442 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 24737580 - 24737542
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24737580 tcagatgagtcttcatctcttccggccacacatgatgat 24737542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 1449541 - 1449608
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  1449541 tggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 1449608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 1536963 - 1536896
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  1536963 tggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 1536896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 31216662 - 31216728
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 31216728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 33346258 - 33346220
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  33346258 tcagatgagtcttcatctctttcggccacacatgatgat 33346220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 6900799 - 6900869
Alignment:
Q  127 aacttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||| |||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  6900799 aacttggcaaa-gttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 6900869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 6900975 - 6900936
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  6900975 gttatggtgcataaggaaatccttatgcaccgtgcataaa 6900936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 7765446 - 7765407
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  7765446 gttatggtgcataaggaaatccttatgcaccgtgcataaa 7765407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 15493346 - 15493307
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  15493346 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15493307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 34869957 - 34869996
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  34869957 gttatggtgcataaggaaatccttatgcaccgtgcataaa 34869996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 18755665 - 18755703
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataa 177  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  18755665 gttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 2759826 - 2759859
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatg 165  Q
    |||||||||||||||||||||||||||| |||||    
T  2759826 ggcaaaagttatggtgcataaggaaatccttatg 2759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 877387 - 877419
Alignment:
Q  350 gagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||| ||||||||||||||||    
T  877387 gagtcttcatctcttcaggccacacatgatgat 877419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 27607 - 27796
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||    
T  27607 ggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctca 27706  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  27707 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaatctctccctctttctctacaattttcaacattct 27796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 27815 - 27854
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27815 ctcagatgagtcttcatctcttccggccacacatgatgat 27854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 132 - 293
Target Start/End: Complemental strand, 28070218 - 28070057
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  28070218 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttctca 28070119  T
Q  232 aactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctc 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28070118 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctc 28070057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 131 - 319
Target Start/End: Complemental strand, 23335773 - 23335582
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctc 230  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||    
T  23335773 tggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctc 23335674  T
Q  231 aaactacaccaaatcaaacatcatttgcttcaaacatttctctcact-aaaacataaagttctcc--ctctctctctacaattttcaacatt 319  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||||    
T  23335673 aaactacaccaaatcaaagttcatttgcatcaaacatttctctcactaaaaacataaagctctccctctctctctctacaattttcaacatt 23335582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 134 - 304
Target Start/End: Original strand, 13362772 - 13362942
Alignment:
Q  134 caaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaa 233  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  13362772 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaa 13362871  T
Q  234 ctacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctct 304  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||| |||||    
T  13362872 ctacaccaaatcaaaattcatttgcttcaaacatttctctcactaaaacataaagctttccctctgtctct 13362942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 2827107 - 2826962
Alignment:
Q  157 atctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaacatcattt 256  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||  ||||||    
T  2827107 atctttatccaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaaatttcattt 2827008  T
Q  257 gcttcaaacatttctctcactaaaacataaagttctccctctctct 302  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||    
T  2827007 gcttcaaacatttatctcactaaaacataaagctctccctctctct 2826962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 134 - 321
Target Start/End: Complemental strand, 25017280 - 25017110
Alignment:
Q  134 caaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaa 233  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||    
T  25017280 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaa 25017181  T
Q  234 ctacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    ||               |||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  25017180 ct---------------tcatttgcttcaaacatttctctcactaaaacataaagctctcc--ctctctctacaattttcaacattct 25017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 34329127 - 34329223
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttc 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||    
T  34329127 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatcataggcttc 34329223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 16668830 - 16668743
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaaa 248  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16668830 ttatgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 16668743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 42512273 - 42512363
Alignment:
Q  231 aaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaacattct 321  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  42512273 aaactacaccaaatcaaacttcatttacttcaaacatttctctcactaaaacctaaagctctccctctctctctacaattttcaacattct 42512363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 18465582 - 18465506
Alignment:
Q  171 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  18465582 tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaa 18465506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 8948930 - 8949003
Alignment:
Q  172 gcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctcaaactacaccaaatcaa 247  Q
    |||||||||||||| ||| ||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  8948930 gcataaacacttcaaaactatcagatttagtgtacacgtg--ataatcctaggcttctcaaactacaccaaatcaa 8949003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 42512200 - 42512271
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgt 204  Q
    |||||||||||||||  | || |||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  42512200 ggcaaaagttatggtt-agaaagaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 28070050 - 28070012
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28070050 tcagatgagtcttcatctcttccggccacacatgatgat 28070012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 13552981 - 13553049
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  13552981 ttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 13553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 23335561 - 23335522
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23335561 ctcagatgagtcttcatctcttccagccacacatgatgat 23335522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 25017091 - 25017052
Alignment:
Q  343 ctcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  25017091 ctcagatgagtcttcatctcttccggcaacacatgatgat 25017052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 26637904 - 26637837
Alignment:
Q  131 tggcaaaagttatggtgcataaggaaatct-ttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    |||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  26637904 tggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagat 26637837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 15416664 - 15416730
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  15416664 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 15416730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 34329293 - 34329331
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  34329293 tcagatgggtcttcatctcttccggccacacatgatgat 34329331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 33868185 - 33868246
Alignment:
Q  161 ttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||  ||||||||||||||||||||||| ||| || | |||| ||||||||||||||    
T  33868185 ttatgcaccctgcataaacacttcacaaccatctgatttattttacatgtgtaataatccta 33868246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 34329247 - 34329287
Alignment:
Q  260 tcaaacatttctctcactaaaacataaagttctccctctct 300  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  34329247 tcaaacatttctctcactaaaacataaagctctctctctct 34329287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 3883929 - 3883968
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  3883929 gttatggtgcataaggaaatccttatgcaccgtgcataaa 3883968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 14394640 - 14394601
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  14394640 gttatggtgcataaggaaatccttatgcaccgtgcataaa 14394601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 14940250 - 14940289
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  14940250 gttatggtgcataaggaaatccttatgcaccgtgcataaa 14940289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 20134441 - 20134402
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  20134441 gttatggtgcataaggaaatccttatgcactctgcataaa 20134402  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 26637731 - 26637770
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  26637731 gttatggtgcataaggaaatccttatgcaccgtgcataaa 26637770  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 14940418 - 14940356
Alignment:
Q  136 aaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 14940356  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 22830831 - 22830791
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  22830831 agttatggtgcataaggaaatccttatgcacactgcataaa 22830791  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 39086749 - 39086709
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||| || |||||    
T  39086749 agttatggtgcataaggaaatccttatgcactatgtataaa 39086709  T

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Target: scaffold0238 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 281
Target Start/End: Complemental strand, 25299 - 25148
Alignment:
Q  130 ttggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttct 229  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| || | ||||    
T  25299 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttct 25200  T
Q  230 caaactacaccaaatcaaacatcatttgcttcaaacatttctctcactaaaa 281  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25199 caaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaa 25148  T

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Target: scaffold0238; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 25112 - 25074
Alignment:
Q  344 tcagatgagtcttcatctcttccggccacacatgatgat 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25112 tcagatgagtcttcatctcttccggccacacatgatgat 25074  T

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Target: scaffold0337 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 7020 - 7116
Alignment:
Q  135 aaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctacgcttctca 231  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  7020 aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctca 7116  T

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Target: scaffold0544 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 10739 - 10650
Alignment:
Q  133 gcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatccta 222  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatccta 10650  T

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Target: scaffold0189 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 11255 - 11193
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaatctttatgcactgtgcataaacacttcacaaccatca 194  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  11255 ggcaaaagttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca 11193  T

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Target: scaffold0581 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 8487 - 8421
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | ||||||||||||||||||||| |||||||||||||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagat 8421  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 33856 - 33817
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  33856 gttatggtgcataaggaaatctttatgcaccgtgcataaa 33817  T

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Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 33684 - 33750
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 33750  T

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Target: scaffold0571 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 742 - 676
Alignment:
Q  132 ggcaaaagttatggtgcataaggaaat-ctttatgcactgtgcataaacacttcacaaccatcagat 197  Q
    ||||||||||||||||||||||  | | | |||||||| |||||||||||| |||||||||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagat 676  T

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Target: scaffold0571; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 547 - 586
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  547 gttatggtgcataaggaaatccttatgcaccgtgcataaa 586  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 24446 - 24407
Alignment:
Q  139 gttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  24446 gttatggtgcataaggaaatccttatgcaccgtgcataaa 24407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 6556 - 6516
Alignment:
Q  138 agttatggtgcataaggaaatctttatgcactgtgcataaa 178  Q
    |||||||||||||||||||||| ||||||||  ||||||||    
T  6556 agttatggtgcataaggaaatccttatgcaccatgcataaa 6516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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