View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1573_high_11 (Length: 306)

Name: NF1573_high_11
Description: NF1573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1573_high_11
NF1573_high_11
[»] chr1 (60 HSPs)
chr1 (28-290)||(26923617-26923879)
chr1 (86-293)||(43802692-43802902)
chr1 (86-293)||(9455881-9456091)
chr1 (86-293)||(19706766-19706976)
chr1 (97-293)||(35930347-35930545)
chr1 (86-293)||(42817316-42817526)
chr1 (86-293)||(47667801-47668011)
chr1 (86-293)||(20391566-20391776)
chr1 (86-293)||(20779972-20780182)
chr1 (86-293)||(22670584-22670794)
chr1 (86-293)||(28135050-28135260)
chr1 (107-293)||(22612252-22612441)
chr1 (111-293)||(22234827-22235011)
chr1 (86-254)||(8727473-8727640)
chr1 (87-204)||(21881703-21881820)
chr1 (91-206)||(29096580-29096695)
chr1 (28-89)||(633942-634003)
chr1 (28-89)||(9456124-9456185)
chr1 (28-89)||(19706672-19706733)
chr1 (28-89)||(20391472-20391533)
chr1 (28-89)||(20779878-20779939)
chr1 (28-89)||(22670490-22670551)
chr1 (28-89)||(28134956-28135017)
chr1 (28-89)||(35930590-35930651)
chr1 (28-89)||(42817222-42817283)
chr1 (28-89)||(43802598-43802659)
chr1 (28-89)||(47667707-47667768)
chr1 (28-85)||(8727679-8727736)
chr1 (28-89)||(22612500-22612561)
chr1 (86-182)||(633814-633910)
chr1 (1-33)||(29302057-29302089)
chr1 (1-33)||(29302180-29302212)
chr1 (1-33)||(31008252-31008284)
chr1 (1-33)||(36040139-36040171)
chr1 (1-33)||(48022588-48022620)
chr1 (1-32)||(6065576-6065607)
chr1 (1-32)||(23944031-23944062)
chr1 (1-32)||(27206874-27206905)
chr1 (1-32)||(28725581-28725612)
chr1 (1-32)||(33604106-33604137)
chr1 (1-32)||(36040261-36040292)
chr1 (1-32)||(37734888-37734919)
chr1 (1-32)||(40262581-40262612)
chr1 (1-32)||(41161580-41161611)
chr1 (1-32)||(48022710-48022741)
chr1 (1-31)||(639794-639824)
chr1 (1-31)||(639914-639944)
chr1 (1-31)||(1036002-1036032)
chr1 (1-31)||(4060286-4060316)
chr1 (2-32)||(6065455-6065485)
chr1 (1-31)||(6283530-6283560)
chr1 (1-31)||(8258058-8258088)
chr1 (1-31)||(23575312-23575342)
chr1 (1-31)||(28725461-28725491)
chr1 (1-31)||(33939292-33939322)
chr1 (197-237)||(633773-633813)
chr1 (1-33)||(14214644-14214676)
chr1 (1-33)||(24115744-24115776)
chr1 (1-33)||(45115285-45115317)
chr1 (1-33)||(52183855-52183887)
[»] chr3 (47 HSPs)
chr3 (86-293)||(25979054-25979264)
chr3 (86-257)||(11787392-11787563)
chr3 (86-293)||(21398557-21398767)
chr3 (86-293)||(28087983-28088193)
chr3 (86-293)||(14890156-14890366)
chr3 (86-293)||(21034003-21034213)
chr3 (86-293)||(12299676-12299886)
chr3 (86-293)||(15846863-15847073)
chr3 (86-282)||(55426797-55426996)
chr3 (86-293)||(20147882-20148092)
chr3 (90-293)||(14146787-14146993)
chr3 (87-295)||(15526519-15526729)
chr3 (28-89)||(55427029-55427090)
chr3 (28-85)||(14147033-14147090)
chr3 (28-89)||(14890399-14890460)
chr3 (28-89)||(15846769-15846830)
chr3 (28-89)||(20147787-20147848)
chr3 (28-89)||(21034246-21034307)
chr3 (28-89)||(21398800-21398861)
chr3 (31-89)||(12299919-12299977)
chr3 (28-89)||(15317406-15317467)
chr3 (28-89)||(25978961-25979022)
chr3 (28-89)||(11787595-11787656)
chr3 (1-33)||(38677680-38677712)
chr3 (1-32)||(17552471-17552502)
chr3 (1-32)||(50261049-50261080)
chr3 (1-32)||(51239237-51239268)
chr3 (1-32)||(51239358-51239389)
chr3 (1-31)||(8439373-8439403)
chr3 (1-31)||(21404009-21404039)
chr3 (1-31)||(25881131-25881161)
chr3 (1-31)||(25881251-25881281)
chr3 (1-31)||(29565104-29565134)
chr3 (1-31)||(36362599-36362629)
chr3 (1-31)||(41349655-41349685)
chr3 (1-31)||(41349776-41349806)
chr3 (2-32)||(51617447-51617477)
chr3 (1-31)||(52168278-52168308)
chr3 (1-34)||(33412580-33412613)
chr3 (2-31)||(40470534-40470563)
chr3 (1-33)||(331913-331945)
chr3 (1-33)||(9170105-9170137)
chr3 (1-33)||(10872787-10872819)
chr3 (1-33)||(12708681-12708713)
chr3 (1-33)||(26367464-26367496)
chr3 (1-33)||(38455158-38455190)
chr3 (1-33)||(45736680-45736712)
[»] scaffold0006 (2 HSPs)
scaffold0006 (86-282)||(67700-67899)
scaffold0006 (28-89)||(67607-67668)
[»] chr7 (78 HSPs)
chr7 (86-282)||(18259450-18259649)
chr7 (86-293)||(47167185-47167395)
chr7 (91-293)||(10669233-10669438)
chr7 (87-282)||(34128351-34128549)
chr7 (97-293)||(19230652-19230851)
chr7 (86-293)||(19393750-19393960)
chr7 (86-291)||(28130329-28130537)
chr7 (86-293)||(8464764-8464974)
chr7 (86-293)||(18399869-18400079)
chr7 (86-293)||(18406853-18407063)
chr7 (86-293)||(18139665-18139877)
chr7 (86-293)||(2204316-2204526)
chr7 (86-293)||(19858887-19859097)
chr7 (86-293)||(48808823-48809033)
chr7 (86-293)||(15729516-15729726)
chr7 (86-293)||(30253903-30254113)
chr7 (86-249)||(2935846-2936007)
chr7 (86-282)||(41681300-41681499)
chr7 (86-252)||(14585976-14586142)
chr7 (86-253)||(15999791-15999958)
chr7 (87-255)||(15170358-15170525)
chr7 (91-247)||(31190774-31190929)
chr7 (87-206)||(24443653-24443772)
chr7 (86-293)||(42150406-42150608)
chr7 (193-282)||(22994084-22994176)
chr7 (87-282)||(3587686-3587884)
chr7 (28-89)||(10669135-10669196)
chr7 (28-89)||(15729759-15729820)
chr7 (28-89)||(19393657-19393718)
chr7 (87-204)||(22968808-22968925)
chr7 (28-89)||(2204560-2204621)
chr7 (28-89)||(8465007-8465068)
chr7 (28-89)||(18400112-18400173)
chr7 (28-89)||(18407096-18407157)
chr7 (28-89)||(19230896-19230957)
chr7 (28-89)||(19859130-19859191)
chr7 (28-89)||(30254146-30254207)
chr7 (28-89)||(47167092-47167153)
chr7 (28-89)||(48808729-48808790)
chr7 (29-85)||(2936043-2936099)
chr7 (28-89)||(14586174-14586235)
chr7 (28-89)||(15999990-16000051)
chr7 (28-89)||(18139571-18139632)
chr7 (28-89)||(28130569-28130630)
chr7 (30-89)||(34128581-34128640)
chr7 (38-89)||(41681216-41681267)
chr7 (28-89)||(18259357-18259418)
chr7 (28-89)||(24443560-24443621)
chr7 (32-89)||(42150315-42150372)
chr7 (35-88)||(24443774-24443829)
chr7 (29-89)||(25845710-25845770)
chr7 (29-89)||(25846129-25846189)
chr7 (132-282)||(25846272-25846429)
chr7 (88-145)||(24443863-24443920)
chr7 (1-33)||(2297324-2297356)
chr7 (1-33)||(2360442-2360474)
chr7 (1-33)||(8595262-8595294)
chr7 (1-33)||(10422923-10422955)
chr7 (1-33)||(38238776-38238808)
chr7 (1-33)||(38238899-38238931)
chr7 (1-32)||(10414933-10414964)
chr7 (172-282)||(24443932-24444045)
chr7 (1-32)||(24935886-24935917)
chr7 (1-32)||(34275307-34275338)
chr7 (1-32)||(34703558-34703589)
chr7 (2-33)||(46648743-46648774)
chr7 (1-39)||(4406066-4406104)
chr7 (1-31)||(8447712-8447742)
chr7 (1-31)||(8571497-8571527)
chr7 (2-32)||(16777886-16777916)
chr7 (1-31)||(28949390-28949420)
chr7 (28-86)||(31190676-31190734)
chr7 (2-31)||(8571377-8571406)
chr7 (28-85)||(15170262-15170319)
chr7 (1-33)||(4407734-4407766)
chr7 (1-33)||(25245258-25245290)
chr7 (1-33)||(27554612-27554644)
chr7 (238-293)||(48813767-48813825)
[»] chr4 (57 HSPs)
chr4 (86-282)||(1941501-1941700)
chr4 (86-282)||(9487328-9487527)
chr4 (86-282)||(11420793-11420992)
chr4 (86-293)||(3369350-3369560)
chr4 (86-293)||(2676778-2676988)
chr4 (86-293)||(15461262-15461472)
chr4 (86-293)||(15814786-15814996)
chr4 (86-293)||(4676310-4676520)
chr4 (86-293)||(18111370-18111580)
chr4 (86-293)||(20243702-20243912)
chr4 (86-293)||(26531378-26531588)
chr4 (86-282)||(30040800-30040999)
chr4 (97-293)||(34975316-34975514)
chr4 (86-293)||(17300286-17300496)
chr4 (86-293)||(18162927-18163137)
chr4 (86-293)||(38816478-38816688)
chr4 (106-293)||(11484265-11484454)
chr4 (86-293)||(5870177-5870393)
chr4 (87-192)||(19365389-19365494)
chr4 (87-249)||(19362229-19362391)
chr4 (86-194)||(4545948-4546056)
chr4 (28-89)||(4676216-4676277)
chr4 (28-89)||(11421024-11421085)
chr4 (28-89)||(20243945-20244006)
chr4 (28-89)||(30040707-30040768)
chr4 (28-89)||(2677021-2677082)
chr4 (28-89)||(3369256-3369317)
chr4 (28-89)||(5870426-5870487)
chr4 (28-89)||(15461505-15461566)
chr4 (28-89)||(15815029-15815090)
chr4 (28-89)||(17300192-17300253)
chr4 (28-89)||(18111276-18111337)
chr4 (28-89)||(18163170-18163231)
chr4 (28-89)||(34975559-34975620)
chr4 (90-291)||(5528809-5529013)
chr4 (28-89)||(1941732-1941793)
chr4 (225-293)||(4545878-4545949)
chr4 (28-89)||(26531621-26531682)
chr4 (87-293)||(9537728-9537936)
chr4 (29-89)||(5616403-5616463)
chr4 (28-74)||(9537982-9538028)
chr4 (28-89)||(4546088-4546149)
chr4 (28-89)||(9487559-9487620)
chr4 (34-89)||(32636492-32636547)
chr4 (28-82)||(19365534-19365588)
chr4 (28-89)||(19362418-19362479)
chr4 (1-34)||(49481995-49482028)
chr4 (1-33)||(21884011-21884043)
chr4 (107-206)||(23056408-23056507)
chr4 (1-32)||(56328443-56328474)
chr4 (2-32)||(28702055-28702085)
chr4 (2-32)||(28702177-28702207)
chr4 (1-31)||(52817682-52817712)
chr4 (1-31)||(55087826-55087856)
chr4 (1-31)||(56328565-56328595)
chr4 (28-89)||(21798134-21798195)
chr4 (1-33)||(54713091-54713123)
[»] chr6 (45 HSPs)
chr6 (87-293)||(8612682-8612891)
chr6 (88-293)||(20736656-20736864)
chr6 (86-293)||(13995270-13995480)
chr6 (87-282)||(5758807-5759005)
chr6 (86-293)||(16788836-16789046)
chr6 (86-293)||(18020168-18020378)
chr6 (86-293)||(1586435-1586645)
chr6 (86-293)||(22860215-22860425)
chr6 (83-293)||(27508671-27508885)
chr6 (86-282)||(17120775-17120972)
chr6 (86-293)||(27528260-27528471)
chr6 (87-257)||(22560511-22560683)
chr6 (86-293)||(14074245-14074455)
chr6 (87-295)||(19218195-19218405)
chr6 (111-293)||(13947519-13947704)
chr6 (172-282)||(14996888-14997000)
chr6 (87-246)||(21994404-21994563)
chr6 (28-89)||(1586341-1586402)
chr6 (28-89)||(14074488-14074549)
chr6 (28-89)||(8612923-8612984)
chr6 (28-89)||(13995176-13995237)
chr6 (28-89)||(16789079-16789140)
chr6 (28-89)||(18020074-18020135)
chr6 (28-89)||(22860121-22860182)
chr6 (28-89)||(27508580-27508641)
chr6 (28-89)||(27528166-27528227)
chr6 (87-206)||(4073432-4073551)
chr6 (28-89)||(19218437-19218498)
chr6 (30-89)||(5758716-5758775)
chr6 (30-89)||(20736563-20736622)
chr6 (28-89)||(22560417-22560478)
chr6 (1-33)||(8146064-8146096)
chr6 (1-33)||(31536304-31536336)
chr6 (1-32)||(6560651-6560682)
chr6 (128-282)||(10359403-10359560)
chr6 (1-32)||(17773616-17773647)
chr6 (1-32)||(21506457-21506488)
chr6 (1-31)||(6560772-6560802)
chr6 (1-31)||(8145943-8145973)
chr6 (1-31)||(14310636-14310666)
chr6 (1-31)||(30397839-30397869)
chr6 (1-31)||(31398221-31398251)
chr6 (28-85)||(10359283-10359339)
chr6 (53-89)||(23846645-23846681)
chr6 (1-33)||(28577594-28577626)
[»] chr5 (57 HSPs)
chr5 (87-293)||(7865760-7865969)
chr5 (87-293)||(12765320-12765529)
chr5 (87-293)||(12704204-12704413)
chr5 (86-293)||(26244868-26245078)
chr5 (89-293)||(22941015-22941222)
chr5 (87-293)||(9812063-9812272)
chr5 (86-293)||(25805712-25805922)
chr5 (86-282)||(5097428-5097627)
chr5 (86-293)||(31096581-31096791)
chr5 (86-293)||(20940792-20941002)
chr5 (86-293)||(31664-31874)
chr5 (86-293)||(23545687-23545897)
chr5 (86-293)||(24933633-24933843)
chr5 (86-293)||(12789990-12790200)
chr5 (87-293)||(26130020-26130231)
chr5 (86-255)||(39535271-39535440)
chr5 (87-293)||(20100570-20100777)
chr5 (28-89)||(5097659-5097720)
chr5 (28-89)||(9811970-9812031)
chr5 (28-89)||(12704111-12704172)
chr5 (28-89)||(12765227-12765288)
chr5 (28-89)||(24933539-24933600)
chr5 (28-89)||(31096824-31096885)
chr5 (28-89)||(31907-31968)
chr5 (28-89)||(7865667-7865728)
chr5 (28-89)||(12789896-12789957)
chr5 (28-89)||(20941035-20941096)
chr5 (28-89)||(23545930-23545991)
chr5 (28-89)||(25805618-25805679)
chr5 (30-89)||(20100478-20100537)
chr5 (28-89)||(22941258-22941319)
chr5 (28-89)||(26129926-26129987)
chr5 (28-89)||(26245110-26245171)
chr5 (112-257)||(31652136-31652285)
chr5 (28-89)||(31267895-31267956)
chr5 (28-89)||(31652017-31652078)
chr5 (1-33)||(3851478-3851510)
chr5 (1-33)||(6763812-6763844)
chr5 (2-34)||(20019864-20019896)
chr5 (1-33)||(23914834-23914866)
chr5 (1-33)||(41180328-41180360)
chr5 (1-32)||(5259379-5259410)
chr5 (1-32)||(23914956-23914987)
chr5 (1-32)||(26300105-26300136)
chr5 (1-31)||(1996842-1996872)
chr5 (1-31)||(1996963-1996993)
chr5 (1-31)||(5259500-5259530)
chr5 (1-31)||(25772149-25772179)
chr5 (2-32)||(25772271-25772301)
chr5 (1-31)||(26141870-26141900)
chr5 (1-31)||(27314470-27314500)
chr5 (2-31)||(13311170-13311199)
chr5 (1-33)||(3851356-3851388)
chr5 (1-33)||(10437752-10437784)
chr5 (1-33)||(12750233-12750265)
chr5 (53-89)||(39535472-39535508)
chr5 (1-33)||(43446852-43446884)
[»] scaffold0063 (1 HSPs)
scaffold0063 (87-293)||(45275-45484)
[»] chr8 (52 HSPs)
chr8 (86-293)||(36970040-36970250)
chr8 (86-293)||(22659821-22660031)
chr8 (86-293)||(26240249-26240459)
chr8 (86-293)||(12561888-12562098)
chr8 (86-293)||(21969098-21969308)
chr8 (86-293)||(22130936-22131146)
chr8 (86-293)||(27007844-27008054)
chr8 (86-293)||(27014987-27015197)
chr8 (86-293)||(28498258-28498468)
chr8 (86-278)||(6430725-6430918)
chr8 (87-291)||(2963262-2963469)
chr8 (86-293)||(8371580-8371790)
chr8 (86-293)||(45534600-45534810)
chr8 (86-293)||(27880815-27881025)
chr8 (86-293)||(28020996-28021206)
chr8 (86-295)||(18835117-18835326)
chr8 (86-282)||(25610970-25611170)
chr8 (89-282)||(20539729-20539924)
chr8 (86-209)||(21916527-21916651)
chr8 (28-89)||(18835358-18835419)
chr8 (28-89)||(45534506-45534567)
chr8 (28-89)||(8371486-8371547)
chr8 (28-89)||(12562131-12562192)
chr8 (28-89)||(22130842-22130903)
chr8 (28-89)||(22659727-22659788)
chr8 (28-89)||(27007750-27007811)
chr8 (28-89)||(27014893-27014954)
chr8 (28-89)||(27880720-27880781)
chr8 (28-89)||(28020901-28020962)
chr8 (28-88)||(36970274-36970334)
chr8 (31-89)||(21916684-21916742)
chr8 (28-89)||(2963169-2963230)
chr8 (28-89)||(21969341-21969402)
chr8 (28-89)||(25611203-25611264)
chr8 (28-89)||(26240492-26240553)
chr8 (132-295)||(8782185-8782349)
chr8 (35-89)||(28498501-28498555)
chr8 (28-89)||(20539630-20539691)
chr8 (28-85)||(8782108-8782165)
chr8 (234-293)||(21862165-21862227)
chr8 (234-293)||(21914328-21914390)
chr8 (1-33)||(31505153-31505185)
chr8 (1-33)||(40098875-40098907)
chr8 (1-32)||(31505032-31505063)
chr8 (1-32)||(31810449-31810480)
chr8 (1-32)||(40098754-40098785)
chr8 (1-31)||(1739680-1739710)
chr8 (1-31)||(1744227-1744257)
chr8 (1-31)||(9056136-9056166)
chr8 (1-31)||(14381233-14381263)
chr8 (1-31)||(24053592-24053622)
chr8 (1-34)||(9056013-9056046)
[»] scaffold0376 (2 HSPs)
scaffold0376 (87-293)||(11856-12065)
scaffold0376 (28-89)||(11763-11824)
[»] scaffold0037 (1 HSPs)
scaffold0037 (86-282)||(40021-40220)
[»] scaffold0393 (2 HSPs)
scaffold0393 (86-293)||(15150-15360)
scaffold0393 (28-89)||(15056-15117)
[»] chr2 (36 HSPs)
chr2 (86-282)||(24229542-24229741)
chr2 (86-293)||(30174142-30174352)
chr2 (86-282)||(19616212-19616412)
chr2 (86-293)||(24250359-24250569)
chr2 (86-293)||(24763883-24764093)
chr2 (87-293)||(15342330-15342539)
chr2 (112-277)||(28719147-28719316)
chr2 (28-89)||(24229448-24229509)
chr2 (28-89)||(24250265-24250326)
chr2 (28-89)||(30174385-30174446)
chr2 (172-282)||(29800204-29800317)
chr2 (28-89)||(19616443-19616504)
chr2 (28-85)||(24763790-24763847)
chr2 (87-282)||(21626458-21626656)
chr2 (35-89)||(15342243-15342297)
chr2 (35-89)||(28741266-28741320)
chr2 (1-33)||(5574225-5574257)
chr2 (1-33)||(19612934-19612966)
chr2 (37-89)||(29800475-29800527)
chr2 (1-33)||(38594337-38594369)
chr2 (1-33)||(38597933-38597965)
chr2 (2-33)||(1980978-1981009)
chr2 (1-32)||(2060198-2060229)
chr2 (1-32)||(2060617-2060648)
chr2 (1-32)||(24457094-24457125)
chr2 (1-32)||(24457215-24457246)
chr2 (1-32)||(26234018-26234049)
chr2 (2-33)||(37195045-37195076)
chr2 (1-32)||(38594459-38594490)
chr2 (1-32)||(38598055-38598086)
chr2 (1-31)||(3887948-3887978)
chr2 (1-31)||(19950112-19950142)
chr2 (1-33)||(5574103-5574135)
chr2 (45-89)||(12098593-12098637)
chr2 (1-33)||(20057221-20057253)
chr2 (1-33)||(34248530-34248562)
[»] scaffold0378 (2 HSPs)
scaffold0378 (86-293)||(8070-8280)
scaffold0378 (28-89)||(8313-8374)
[»] scaffold0264 (3 HSPs)
scaffold0264 (86-293)||(4002-4212)
scaffold0264 (86-293)||(10857-11067)
scaffold0264 (28-89)||(3908-3969)
[»] scaffold0028 (2 HSPs)
scaffold0028 (86-293)||(119495-119705)
scaffold0028 (28-89)||(119738-119799)
[»] scaffold0001 (3 HSPs)
scaffold0001 (86-293)||(130551-130761)
scaffold0001 (97-270)||(138474-138649)
scaffold0001 (28-89)||(130457-130518)
[»] scaffold0466 (2 HSPs)
scaffold0466 (87-293)||(13276-13486)
scaffold0466 (28-89)||(13182-13243)
[»] scaffold0111 (1 HSPs)
scaffold0111 (87-255)||(26413-26581)
[»] scaffold0031 (2 HSPs)
scaffold0031 (87-293)||(40315-40524)
scaffold0031 (28-89)||(40221-40282)
[»] scaffold0061 (1 HSPs)
scaffold0061 (128-293)||(76325-76492)
[»] scaffold0019 (1 HSPs)
scaffold0019 (86-270)||(19161-19348)
[»] scaffold0139 (1 HSPs)
scaffold0139 (135-293)||(18791-18951)
[»] scaffold2089 (1 HSPs)
scaffold2089 (86-293)||(41-255)
[»] scaffold1948 (1 HSPs)
scaffold1948 (96-293)||(952-1151)
[»] scaffold0099 (2 HSPs)
scaffold0099 (135-293)||(8865-9028)
scaffold0099 (28-89)||(9118-9180)
[»] scaffold0086 (2 HSPs)
scaffold0086 (86-282)||(53550-53741)
scaffold0086 (28-89)||(53773-53834)
[»] scaffold0454 (1 HSPs)
scaffold0454 (193-282)||(13769-13861)
[»] scaffold0112 (2 HSPs)
scaffold0112 (86-243)||(1-158)
scaffold0112 (28-89)||(191-252)
[»] scaffold0611 (1 HSPs)
scaffold0611 (172-293)||(9534-9657)
[»] scaffold0059 (1 HSPs)
scaffold0059 (180-293)||(33927-34042)
[»] scaffold0034 (1 HSPs)
scaffold0034 (27-89)||(83247-83309)
[»] scaffold0136 (2 HSPs)
scaffold0136 (87-206)||(8588-8706)
scaffold0136 (36-92)||(8736-8792)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-33)||(120260-120292)
scaffold0024 (2-32)||(120139-120169)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-32)||(61157-61188)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-31)||(3945-3975)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-35)||(54379-54413)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-32)||(17161-17191)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 28 - 290
Target Start/End: Original strand, 26923617 - 26923879
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacatattaaagcttgactacggatatatttaagaataacatta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26923617 tgtatagacttaatatctcatatctatgacccatgagatgtggtcatcagtctacatacatattaaagcttgactacggatacatttaagaataacatta 26923716  T
Q  128 tttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| |||||||| |||    
T  26923717 tttatgttaatgtaatctaatgattaagtcacactcaatatacaattacacgaactatctattctagaaactttattaacatcactacaaatataataaa 26923816  T
Q  228 gagtgtcatatattatttaataataaaagtgatacataagataagtttaacataacctaatgg 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26923817 gagtgtcatatattatttaataataaaagtgatacataagataagtttaacataacctaatgg 26923879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 43802692 - 43802902
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||| ||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||  ||||||||||||||    
T  43802692 catattaaagctttgactacgaatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatataattacacgaacta 43802791  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||| ||||||   |||||||||||||| ||||||||||    
T  43802792 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaatattaaaagtcatgatacataagatatgtttaacata 43802890  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  43802891 aactattggcct 43802902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 9456091 - 9455881
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  9456091 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 9455992  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  9455991 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 9455893  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  9455892 aactattggcct 9455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 19706766 - 19706976
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  19706766 catattaaagctttgactacggatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatatcattacacgaacta 19706865  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    |||||||||||||||||||||||||   | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  19706866 tctattctaaggactttattaacat-tgtttaaatataataaagagtgacatatattattcaataataaaagtcatgatacataagataggtttaacata 19706964  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  19706965 aactattggcct 19706976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 97 - 293
Target Start/End: Complemental strand, 35930545 - 35930347
Alignment:
Q  97 ttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaagg 196  Q
    ||||||||||||| ||||||||||| | || |||||| ||||||||||| ||||||||||| |||| |||||   ||||||| |||||||||||||||||    
T  35930545 ttgactacggatacatttaagaatagcgttctttatgataatgtaatctcatgattaagtcgcacttaatatattattacacaaactatctattctaagg 35930446  T
Q  197 actttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   | |||||||||||||||||||||||| ||| ||||||    
T  35930445 actttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcattatacataagataagtttaacataaactattggcct 35930347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 42817316 - 42817526
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  42817316 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 42817415  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  42817416 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 42817514  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  42817515 aactattggcct 42817526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 47667801 - 47668011
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||| ||||||    
T  47667801 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacatgaacta 47667900  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  47667901 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 47667999  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  47668000 aactattggcct 47668011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 20391566 - 20391776
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  20391566 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 20391665  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||  ||||    
T  20391666 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttctcata 20391764  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  20391765 aactattggcct 20391776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 20779972 - 20780182
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  20779972 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 20780071  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   ||||||||||||||| | |||||||    
T  20780072 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatacaataataaaagtcatgatacataagataaatataacata 20780170  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  20780171 aactattggcct 20780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 22670584 - 22670794
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  22670584 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 22670683  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  22670684 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 22670782  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  22670783 aactattggcct 22670794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 28135050 - 28135260
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| |||| |||||| |||| | || || | | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  28135050 catattaaagctttgactacagatacatttaataatagcgttcttaaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 28135149  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  28135150 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 28135248  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  28135249 aactattggcct 28135260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 22612441 - 22612252
Alignment:
Q  107 atatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaa 206  Q
    ||||||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||| ||||||||||||||||||||||    
T  22612441 atatatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaactttctattctaaggactttattaa 22612342  T
Q  207 catcactataaatataacaaagagtgtcatatattattt-aataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    ||| | | ||||||||| |||||||| |||||||||||| |||||||||||   |||||||||||||| ||||||||||| ||| ||||||    
T  22612341 catta-tctaaatataataaagagtgccatatattatttcaataataaaagtcatgatacataagataggtttaacataaactattggcct 22612252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 111 - 293
Target Start/End: Original strand, 22234827 - 22235011
Alignment:
Q  111 atttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatc 210  Q
    ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||     
T  22234827 atttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaactatctattctaaggactttattaacatt 22234926  T
Q  211 actataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||| ||| ||||||    
T  22234927 a-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacataaactattggcct 22235011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 254
Target Start/End: Complemental strand, 8727640 - 8727473
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||| |||||||| |||| |||| |||||||| || |||||||||| ||||||| |||||| ||||||||| |||||  |||||||||||  ||    
T  8727640 catattaaagtttgactacagatagatttcagaataacgttctttatgttaaagtaatcttatgatttagtcacacttaatataaaattacacgaa-aat 8727542  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaa 254  Q
     ||||||| ||||||||||||||| |  | || ||| | |||||||| |||||||||||||||| ||||    
T  8727541 ttattctagggactttattaacattataacaagtatgataaagagtgccatatattatttaatagtaaa 8727473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 21881703 - 21881820
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| ||||||||||||| ||||||||||  |||| ||||  |||||||||||| |||||||| | ||||| ||||| | || ||||||||||||    
T  21881703 atattaaagattgactacggatacatttaagaattgcattctttacattaatgtaatctcatgattaattaacacttaatattccatcacacgaactatc 21881802  T
Q  187 tattctaaggactttatt 204  Q
    ||||||  ||||||||||    
T  21881803 tattctctggactttatt 21881820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 29096695 - 29096580
Alignment:
Q  91 taaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctatt 190  Q
    ||||||||||||||  |||  |||||||||||  || ||| |||||||||||||| | |||||||||||||| ||||| | || ||| ||||||||||||    
T  29096695 taaagcttgactacatatacttttaagaataaagttctttttgttaatgtaatcttacgattaagtcacacttaatattccatcacatgaactatctatt 29096596  T
Q  191 ctaaggactttattaa 206  Q
    ||| ||||||||||||    
T  29096595 ctagggactttattaa 29096580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 634003 - 633942
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  634003 tgtatagacttaatatctcatagctatgacccatgagatgcggtcatcagtctacatacata 633942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9456185 - 9456124
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  9456185 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 9456124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 19706672 - 19706733
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  19706672 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 19706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 20391472 - 20391533
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20391472 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 20391533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 20779878 - 20779939
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20779878 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 20779939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22670490 - 22670551
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22670490 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 22670551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 28134956 - 28135017
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  28134956 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 28135017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 35930651 - 35930590
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||    
T  35930651 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctatatacata 35930590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 42817222 - 42817283
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  42817222 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 42817283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 43802598 - 43802659
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  43802598 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 43802659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 47667707 - 47667768
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  47667707 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 47667768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 8727736 - 8727679
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  8727736 tgtatagacttaatatctcatatatatgacccatgagatgtagtcatcagtctacata 8727679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 22612561 - 22612500
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  22612561 tgtatagacttgatatatcatatctatgacccatgagatgcggtcatcagtctacatacata 22612500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 633910 - 633814
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaac 182  Q
    |||||||||||||||||||||||| |||||| |||||  || |||||| |||| |||||| |||||||||| ||||| |||||   |||||||||||    
T  633910 catattaaagcttgactacggatacatttaaaaataatgttctttatgataatttaatctcatgattaagttacacttaatatattattacacgaac 633814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29302089 - 29302057
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  29302089 tttttgcttatattagtgaccggagggtgtata 29302057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 29302180 - 29302212
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  29302180 tttttgcttatattagtgaccggagggtgtata 29302212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31008284 - 31008252
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  31008284 tttttgcttatattagtgaccggagggtgtata 31008252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36040171 - 36040139
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  36040171 tttttgcttatattagtgaccggagggtgtata 36040139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48022620 - 48022588
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  48022620 tttttgcttatattagtgaccggagggtgtata 48022588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6065576 - 6065607
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  6065576 tttttgcttatattagtgaccggagggtgtat 6065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23944062 - 23944031
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  23944062 tttttgcttatattagtgaccggagggtgtat 23944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27206874 - 27206905
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  27206874 tttttgcttatattagtgaccggagggtgtat 27206905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28725581 - 28725612
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  28725581 tttttgcttatattagtgaccggagggtgtat 28725612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33604106 - 33604137
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  33604106 tttttgcttatattagtgaccggagggtgtat 33604137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 36040261 - 36040292
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  36040261 tttttgcttatattagtgaccggagggtgtat 36040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37734888 - 37734919
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  37734888 tttttgcttatattagtgaccggagggtgtat 37734919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40262581 - 40262612
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  40262581 tttttgcttatattagtgaccggagggtgtat 40262612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41161580 - 41161611
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  41161580 tttttgcttatattagtgaccggagggtgtat 41161611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48022710 - 48022741
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  48022710 tttttgcttatattagtgaccggagggtgtat 48022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 639824 - 639794
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  639824 tttttgcttatattagtgaccggagggtgta 639794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 639914 - 639944
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  639914 tttttgcttatattagtgaccggagggtgta 639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1036002 - 1036032
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  1036002 tttttgcttatattagtgaccggagggtgta 1036032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 4060286 - 4060316
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  4060286 tttttgcttatattagtgaccggagggtgta 4060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 6065485 - 6065455
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  6065485 ttttgcttatattagtgaccggagggtgtat 6065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 6283560 - 6283530
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  6283560 tttttgcttatattagtgaccggagggtgta 6283530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 8258058 - 8258088
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  8258058 tttttgcttatattagtgaccggagggtgta 8258088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 23575342 - 23575312
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  23575342 tttttgcttatattagtgaccggagggtgta 23575312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28725491 - 28725461
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  28725491 tttttgcttatattagtgaccggagggtgta 28725461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 33939322 - 33939292
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  33939322 tttttgcttatattagtgaccggagggtgta 33939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 633813 - 633773
Alignment:
Q  197 actttattaacatcactataaatataacaaagagtgtcata 237  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  633813 actttattaacattactataaatataataaagagtggcata 633773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14214644 - 14214676
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  14214644 tttttgcttataatagtgaccggagggtgtata 14214676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24115776 - 24115744
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||| |||||||||||    
T  24115776 tttttgcttatattagtgaccagagggtgtata 24115744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 45115285 - 45115317
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45115285 tttttgcttataatagtgaccggagggtgtata 45115317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 52183855 - 52183887
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||| |||||||||||    
T  52183855 tttttgcttatattagtgaccagagggtgtata 52183887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 25979054 - 25979264
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||||||| ||||||||||| | || |||||| ||||||||||| |||||||||||||||| |||||   ||||||||||||||    
T  25979054 catattaaagcttgactacggatacatttaagaatagcgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactat 25979153  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  25979154 ctattctaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacataa 25979253  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  25979254 actattggcct 25979264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 86 - 257
Target Start/End: Complemental strand, 11787563 - 11787392
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||||||| |||| ||||||||||||| || |||||| ||||||||||| |||||||||||||| | |||||   ||||||||||||||    
T  11787563 catattaaagcttgactacagatacatttaagaataacgttctttatgataatgtaatctcatgattaagtcacatttaatatattattacacgaactat 11787464  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaagt 257  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  11787463 ctattctaaggactttattaacattactataaatataataaagagtgtcatatattattcaataagaaaagt 11787392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 21398767 - 21398557
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||| | |||||  ||||||| ||||||    
T  21398767 catattaaagctttgactacggatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacaattaatatataattacatgaacta 21398668  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  21398667 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacata 21398569  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  21398568 aactattggcct 21398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 28088193 - 28087983
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||||||| ||||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  28088193 catattaaagctttgactacggatctatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 28088094  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||| |||||||||| || | | ||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  28088093 tctattctaagaactttattaatatta-tctaaatataataaagagtgtcatatattatttaataataaaagtcatgatacataagataagtttaacata 28087995  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  28087994 aactattggcct 28087983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 14890366 - 14890156
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| || |||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  14890366 catattaaagctttgaatacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 14890267  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  14890266 tctattctaaggactttattaacatta-tataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataggtttaacata 14890168  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  14890167 aactattggcct 14890156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 21034213 - 21034003
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  21034213 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 21034114  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  21034113 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 21034015  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  21034014 aactattggcct 21034003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 12299886 - 12299676
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  12299886 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 12299787  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||| | ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  12299786 tctattctaaggactttattaacatta-tctaaatataataaagagcgccatatattattcaataataaaagtcatgatacataagataggtttaacata 12299688  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  12299687 aactattggcct 12299676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 15846863 - 15847073
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| |  |||||||||| |||||||||||||||| |||||   |||||||||||||    
T  15846863 catattaaagctttgactacggatacatttaagaatagcgttctttaagaaaatgtaatctcatgattaagtcacacttaatatattattacacgaacta 15846962  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||| ||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  15846963 tctattctaaggaatttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 15847061  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  15847062 aactattggcct 15847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 55426996 - 55426797
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||| ||| |||||   |||||||||||||    
T  55426996 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcatacttaatatattattacacgaacta 55426897  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   | ||||||||||||  |||||||||    
T  55426896 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcataatacataagatagatttaacata 55426798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 20147882 - 20148092
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  |||||||||||   || | || | ||||||||||| |||||||||| ||||| |||||   |||||||||||||    
T  20147882 catattaaagctttgactacggattcatttaagaatagtgttctataagataatgtaatctcatgattaagttacacttaatatattattacacgaacta 20147981  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  20147982 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 20148080  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  20148081 aactattggcct 20148092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 90 - 293
Target Start/End: Complemental strand, 14146993 - 14146787
Alignment:
Q  90 ttaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctat 189  Q
    ||||||||||||||| |||| |||||  |||| | || || ||||||||||| | | |||||||||||||||| ||||| | ||||||||||||||||||    
T  14146993 ttaaagcttgactacagatacatttagaaatagctttgttaatgttaatgtagtttcatgattaagtcacacttaatattccattacacgaactatctat 14146894  T
Q  190 tctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataaccta 286  Q
    |||| ||||  ||||||  | |  | |||||||| |||||||| |||||||||||||||||||||||   |||||||||| ||||||||||||||| |||    
T  14146893 tctatggaccgtattaatcttataacaaatataataaagagtgccatatattatttaataataaaagtcatgatacataacataagtttaacataaacta 14146794  T
Q  287 atggcct 293  Q
     ||||||    
T  14146793 ttggcct 14146787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 87 - 295
Target Start/End: Complemental strand, 15526729 - 15526519
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||  ||  |||||||||||   || |||||||||||||||||| ||||||||||||| || ||||| | ||||||||||||||     
T  15526729 atattaaagcttgactacatatgcatttaagaatagtgttctttatgttaatgtaatctcatgattaagtcacccttaatattccattacacgaactata 15526630  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaagt---gatacataagataagtttaacataac 283  Q
    ||||||| ||| ||||||||  | |  | |||||||| ||||| |||||||||||||||||||||||||||   ||||| ||   ||||||||||||||     
T  15526629 tattctaggga-tttattaatcttataacaaatataataaagaatgtcatatattatttaataataaaagtcatgatacgtagcttaagtttaacataaa 15526531  T
Q  284 ctaatggcctat 295  Q
     |||||||||||    
T  15526530 ttaatggcctat 15526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 55427090 - 55427029
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  55427090 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 55427029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 14147090 - 14147033
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14147090 tgtatagacttaatatctcatatccatgacccatgagatgtggtcatcagtctacata 14147033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 14890460 - 14890399
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  14890460 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 14890399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15846769 - 15846830
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15846769 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 15846830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 20147787 - 20147848
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20147787 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 20147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21034307 - 21034246
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  21034307 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 21034246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21398861 - 21398800
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  21398861 tgtatagacttgatatctcatatctatgacccatgagatgaggtcataagtctacatacata 21398800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 12299977 - 12299919
Alignment:
Q  31 atagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12299977 atagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 12299919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15317406 - 15317467
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||    
T  15317406 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcaatctacatacata 15317467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 25978961 - 25979022
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| || |||| |||||||||    
T  25978961 tgtatagacttaatatctcatatctataacccatgagatgcggttatcagtcaacatacata 25979022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 11787656 - 11787595
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||| || |||| |||||||||    
T  11787656 tgtatagacttaatatctcatatctataaccaatgagatgcggttatcagtcaacatacata 11787595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38677680 - 38677712
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  38677680 tttttgcttatattagtgaccggagggtgtata 38677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17552502 - 17552471
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  17552502 tttttgcttatattagtgaccggagggtgtat 17552471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 50261049 - 50261080
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  50261049 tttttgcttatattagtgaccggagggtgtat 50261080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 51239268 - 51239237
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  51239268 tttttgcttatattagtgaccggagggtgtat 51239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 51239358 - 51239389
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  51239358 tttttgcttatattagtgaccggagggtgtat 51239389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 8439373 - 8439403
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  8439373 tttttgcttatattagtgaccggagggtgta 8439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 21404009 - 21404039
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  21404009 tttttgcttatattagtgaccggagggtgta 21404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25881161 - 25881131
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  25881161 tttttgcttatattagtgaccggagggtgta 25881131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25881251 - 25881281
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  25881251 tttttgcttatattagtgaccggagggtgta 25881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29565134 - 29565104
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  29565134 tttttgcttatattagtgaccggagggtgta 29565104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 36362629 - 36362599
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  36362629 tttttgcttatattagtgaccggagggtgta 36362599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41349685 - 41349655
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  41349685 tttttgcttatattagtgaccggagggtgta 41349655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 41349776 - 41349806
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  41349776 tttttgcttatattagtgaccggagggtgta 41349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 51617447 - 51617477
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  51617447 ttttgcttatattagtgaccggagggtgtat 51617477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 52168308 - 52168278
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  52168308 tttttgcttatattagtgaccggagggtgta 52168278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33412580 - 33412613
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtatag 34  Q
    |||||||||||||||||||| |||||||||||||    
T  33412580 tttttgcttatattagtgactggagggtgtatag 33412613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 40470534 - 40470563
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgta 31  Q
    ||||||||||||||||||||||||||||||    
T  40470534 ttttgcttatattagtgaccggagggtgta 40470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 331913 - 331945
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  331913 tttttgcttataatagtgaccggagggtgtata 331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9170137 - 9170105
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  9170137 tttttgcttataatagtgaccggagggtgtata 9170105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10872787 - 10872819
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10872787 tttttgcttataatagtgaccggagggtgtata 10872819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12708713 - 12708681
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  12708713 tttttgcttataatagtgaccggagggtgtata 12708681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26367496 - 26367464
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||| ||||||||||||||||||    
T  26367496 tttttgcttatatttgtgaccggagggtgtata 26367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38455190 - 38455158
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||| |||||||||||||||||    
T  38455190 tttttgcttatattaatgaccggagggtgtata 38455158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45736712 - 45736680
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  45736712 tttttgcttataatagtgaccggagggtgtata 45736680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 67700 - 67899
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||| ||| ||||||||||||| || |||||| || |||||||| |||||||||||||||| |||||   ||||||||||||||    
T  67700 catattaaagcttgactacgaatacatttaagaataacgttctttatgatactgtaatctcatgattaagtcacacttaatatattattacacgaactat 67799  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  67800 ctattctaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataaaataagtttaacataa 67899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 67607 - 67668
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  67607 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcagtctatatacata 67668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 18259450 - 18259649
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||| ||||| ||||||||||||  || |||||| ||||||||||| |||||||||||||||| |||||   ||||||||||||||    
T  18259450 catattaaagcttgactatggatacatttaagaataatgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactat 18259549  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  18259550 ctattctaaggactttattaacattactataaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataagtttaacataa 18259649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 47167185 - 47167395
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||  ||| ||||||||||||| || |||||| ||||||||||| ||||| |||||||||| |||||   ||||||||||||||    
T  47167185 catattaaagcttgactacaaatacatttaagaataacgttctttatgataatgtaatctcatgataaagtcacacttaatatattattacacgaactat 47167284  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||   ||||||||||||||||||||||||||    
T  47167285 ctattctaaggactttattaacattactataaatataataaagagtgtcacatattattcaataataaaagtcatgatacataagataagtttaacataa 47167384  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  47167385 actattggcct 47167395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 91 - 293
Target Start/End: Original strand, 10669233 - 10669438
Alignment:
Q  91 taaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctatt 190  Q
    ||||| ||||||||||||| ||||||||||||| || |||||| ||||||||||| |||||||||||||||| | |||   |||||||||||||||||||    
T  10669233 taaagattgactacggatacatttaagaataacgttctttatgataatgtaatctgatgattaagtcacacttattatattattacacgaactatctatt 10669332  T
Q  191 ctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaa 287  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||| ||||||||||| |||     
T  10669333 ctaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataggtttaacataaactat 10669432  T
Q  288 tggcct 293  Q
    ||||||    
T  10669433 tggcct 10669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 87 - 282
Target Start/End: Complemental strand, 34128549 - 34128351
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||||||| |||||||||| |||||| |||||  || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  34128549 atattaaagcttaactacggatacatttaaaaataatgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 34128450  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  34128449 tattctaagaactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacataa 34128351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 97 - 293
Target Start/End: Complemental strand, 19230851 - 19230652
Alignment:
Q  97 ttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaagg 196  Q
    ||||||||||||| ||||||||||| | || |||||| ||||||||||| |||||||||| ||||| |||||   |||||||||||||||||||||||||    
T  19230851 ttgactacggatacatttaagaatagcgttctttatgataatgtaatctcatgattaagttacacttaatatattattacacgaactatctattctaagg 19230752  T
Q  197 actttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | ||| ||||||    
T  19230751 actttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacattaactattggcct 19230652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 19393750 - 19393960
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||   |||||| |||||||    
T  19393750 catattaaagcttgactacagatacatttaagaatagcattctttatgttaatgtaatctcatgattaagtcacacttaatatatcattacatgaactat 19393849  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||| ||  |||||||||||||| |||| | |||||| ||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  19393850 ctattatagagactttattaacattactacagatataataaagagtatcatatattatttaataataaaagtcatgatacataagataagtttaacataa 19393949  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  19393950 actattggcct 19393960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 86 - 291
Target Start/End: Complemental strand, 28130537 - 28130329
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||||||| |||| ||||||||||| | || |||||| ||||||||||| |||||||||||||||| |||||   ||||||||||||||    
T  28130537 catattaaagcttgactacagatacatttaagaatagcgttttttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactat 28130438  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||| ||||||||| |||||||| | ||||||||||| ||||||||||| ||| |||| |||||||||||   |||||||||||||||||| |||||||    
T  28130437 ctattataaggacttcattaacattattataaatataataaagagtgtcacatactattcaataataaaagttatgatacataagataagttcaacataa 28130338  T
Q  283 cctaatggc 291  Q
     ||| ||||    
T  28130337 actattggc 28130329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 8464974 - 8464764
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  8464974 catattaaagcttcgactacggatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 8464875  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||| ||||||||| ||||||||||    
T  8464874 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgattcataagataggtttaacata 8464776  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  8464775 aactattggcct 8464764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 18400079 - 18399869
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  18400079 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 18399980  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  18399979 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 18399881  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  18399880 aactattggcct 18399869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 18407063 - 18406853
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  18407063 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 18406964  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  18406963 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 18406865  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  18406864 aactattggcct 18406853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 18139665 - 18139877
Alignment:
Q  86 catattaaagctt-gactacggatat--atttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaac 182  Q
    ||||||||||||| ||||||||||||  ||||||||||||| || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||    
T  18139665 catattaaagctttgactacggatatatatttaagaataacgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaac 18139764  T
Q  183 tatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaaca 279  Q
    ||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| ||||||||| |   |||||||||||||| ||||||||    
T  18139765 tatctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaggtcatgatacataagataggtttaaca 18139863  T
Q  280 taacctaatggcct 293  Q
    ||| ||| ||||||    
T  18139864 taaactattggcct 18139877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 2204526 - 2204316
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  2204526 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 2204427  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  2204426 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattatccaataataaaagtcatgatacataagataggtttaacata 2204328  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  2204327 aactattggcct 2204316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 19859097 - 19858887
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||| ||||||||    
T  19859097 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattaaacgaacta 19858998  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  19858997 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 19858899  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  19858898 aactattggcct 19858887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 48808823 - 48809033
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  48808823 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 48808922  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  48808923 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 48809021  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  48809022 aactattggcct 48809033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 15729726 - 15729516
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| |||||||||||   || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  15729726 catattaaagctttgactacggatacatttaagaatagtgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 15729627  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  15729626 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 15729528  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  15729527 aactattggcct 15729516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 30254113 - 30253903
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| |  | | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  30254113 catattaaagctttgactacggatacatttaagaatagcgatctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 30254014  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||| | |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  30254013 tctattctaaggactttattaacatta-tctaaatattataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 30253915  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  30253914 aactattggcct 30253903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 2936007 - 2935846
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||  |||| |||||  ||||||| |||||||    
T  2936007 catattaaagcttgactacggatacatttaagaataacgttctttatgttaatgtaatctcatgattaagt--cacttaatatataattacatgaactat 2935910  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaata 249  Q
     ||||||| ||||||||||||||| || | ||||||||  ||||||| ||||||||||||||||    
T  2935909 ttattctagggactttattaacattacaacaaatataatgaagagtgacatatattatttaata 2935846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 41681300 - 41681499
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| |||| |||||||||||||||| | || | ||| ||||||| |||||||||||||||| |||||   ||||||  |||||    
T  41681300 catattaaagctttgactacagatacatttaagaataacattctataagataaagtaatctcatgattaagtcacacttaatatattattacataaacta 41681399  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacata 281  Q
    ||||||| ||||||||||||||||| | | ||||||||| ||||||||| |||||||||| ||||||||||    ||||||||||||||||||||| |||    
T  41681400 tctattccaaggactttattaacatta-tctaaatataataaagagtgttatatattattcaataataaaaatcatgatacataagataagtttaatata 41681498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 14586142 - 14585976
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||| ||||||| ||||| |||||| |||| | ||  ||| | ||||||||||| |||||||||||||||| ||||| | |||| |||||||||    
T  14586142 catattaaagtttgactaaggatacatttaataatagcgttcattaagataatgtaatctcatgattaagtcacacttaatataccattatacgaactat 14586043  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataata 252  Q
    ||||| || ||||||||||||||| || | |||||||| |||||||| |||||||||||||||||||    
T  14586042 ctattttagggactttattaacattacaacaaatataataaagagtgacatatattatttaataata 14585976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 15999958 - 15999791
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||| ||||||| ||||| |||||| |||| | || |||| | ||||||||||| |||||||||||||||| ||||| | |||| |||||||||    
T  15999958 catattaaagtttgactaaggatacatttaataatagcgttctttaaggtaatgtaatctcatgattaagtcacacttaatataccattatacgaactat 15999859  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataa 253  Q
    ||||| || | |||| |||||||| || | |||||||| |||||||| ||||||||||||||||||||    
T  15999858 ctattttaggtacttaattaacattacaacaaatataataaagagtgacatatattatttaataataa 15999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 255
Target Start/End: Original strand, 15170358 - 15170525
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||| ||||||||||| |||| ||||| | |||||| |||| |||    
T  15170358 atattaaagcttgactacaaatatatttaagaataacgttttttatgttaatgtaatctcatgattaagtcccacttaatattccattacatgaac-atc 15170456  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa 255  Q
    |||| || ||||||||||||  | || | || ||||| ||||| |||| |||||||||||||| |||||    
T  15170457 tattttatggactttattaattttacaacaattataataaagaatgtcgtatattatttaatattaaaa 15170525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 31190774 - 31190929
Alignment:
Q  91 taaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctatt 190  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||||||||| | || |||||||||||||| ||||| | |||||| |||||||||| |    
T  31190774 taaagcttgactaaggatatatttaataataatgttatttatgttaatgtaagcaaacgattaagtcacacttaatataccattacatgaactatcta-t 31190872  T
Q  191 ctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaa 247  Q
    ||  ||||||||||||||| || | |||||||| ||| |||| ||||||||||||||    
T  31190873 ctggggactttattaacattacaacaaatataataaaaagtgccatatattatttaa 31190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 24443653 - 24443772
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||| ||||||||| ||||||||||| | || ||||||||||||||||||  ||||||||||||||| ||||| | |||||||||||||||    
T  24443653 atattaaagcttggctacggatacatttaagaatatcgttctttatgttaatgtaatctcgtgattaagtcacacttaatattccattacacgaactatc 24443752  T
Q  187 tattctaaggactttattaa 206  Q
    |||| || ||||||||||||    
T  24443753 tattatagggactttattaa 24443772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 42150406 - 42150608
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||| ||||||||||||||| ||              |||||||    
T  42150406 catattaaagcttgactacggatacattta-gaataacgttctttatgttaatgtaatctcatgattaagtcacacaca--------------gaactat 42150490  T
Q  186 ctattc--taaggactttattaacatca----ctataaatataacaaagagtgtcatatattatttaataataaaagt---gatacat-aagataagttt 275  Q
    ||||||  || || |||||||||||| |    ||| ||||||||||||||||||||||||||||| ||||||||||||   ||||||| |||||||||||    
T  42150491 ctattctataggggctttattaacattactacctacaaatataacaaagagtgtcatatattattcaataataaaagtcacgatacataaagataagttt 42150590  T
Q  276 aacataacctaatggcct 293  Q
    ||||||| ||| ||||||    
T  42150591 aacataaactattggcct 42150608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 22994176 - 22994084
Alignment:
Q  193 aaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataa 282  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||    
T  22994176 aaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataa 22994084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 87 - 282
Target Start/End: Complemental strand, 3587884 - 3587686
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||||||||||||  |||  ||||||||||||| || |||||||||| ||||||| |||||||||||||| | |||||   || |||  ||||| |    
T  3587884 atattaaagcttgactatagattcatttaagaataacgttttttatgttaaagtaatctcatgattaagtcacagttaatatttcatcacataaactacc 3587785  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||||| ||||||||||||  | || | || ||||| ||||| |  ||||| |||||||||||||||||   |||||||||  |||||||| ||||||    
T  3587784 tattctatggactttattaatcttacaacaattataataaagaattgcatatgttatttaataataaaagtcatgatacatagcataagtttcacataa 3587686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 10669135 - 10669196
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  10669135 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 10669196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 15729820 - 15729759
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15729820 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 15729759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 19393657 - 19393718
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19393657 tgtatagacttaatatctcatatttatgacccatgaaatgtggtcattagtctacatacata 19393718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 22968925 - 22968808
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| ||||||||||||| ||||||||||  |||| ||||  |||||||||||| |||||||| | ||||| ||||| | || ||||||||||||    
T  22968925 atattaaagattgactacggatacatttaagaattgcattctttacattaatgtaatctcatgattaattaacacttaatattccatcacacgaactatc 22968826  T
Q  187 tattctaaggactttatt 204  Q
    ||||||  ||||||||||    
T  22968825 tattctctggactttatt 22968808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 2204621 - 2204560
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2204621 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 2204560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 8465068 - 8465007
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8465068 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 8465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18400173 - 18400112
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18400173 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 18400112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18407157 - 18407096
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18407157 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 18407096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19230957 - 19230896
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  19230957 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 19230896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19859191 - 19859130
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  19859191 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 19859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 30254207 - 30254146
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  30254207 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 30254146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 47167092 - 47167153
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  47167092 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcagtctacatacata 47167153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 48808729 - 48808790
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  48808729 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 48808790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 2936099 - 2936043
Alignment:
Q  29 gtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  2936099 gtatagacttaatatctcatatctatgacccatgagatgtagtcatcagtctacata 2936043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 14586235 - 14586174
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  14586235 tgtatggacttaatatctcatatctatgacccatgatatgtggtcatcagtctgcatacata 14586174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 16000051 - 15999990
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  16000051 tgtatggacttaatatctcatatctatgacccatgatatgtggtcatcagtctgcatacata 15999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18139571 - 18139632
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18139571 tgtatagacctgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 18139632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 28130630 - 28130569
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||    
T  28130630 tgtatagacttaatatctcatatttatgacccatgagatgcggtcatcagtctacatgcata 28130569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 34128640 - 34128581
Alignment:
Q  30 tatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||    
T  34128640 tatagacttaatatctcatatctataacccatgagatgcagtcatcagtctacatacata 34128581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 41681216 - 41681267
Alignment:
Q  38 taatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  41681216 taatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 41681267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18259357 - 18259418
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| || |||| |||||||||    
T  18259357 tgtatagacttaatatctcatatctataacccatgagatgcggttatcagtcaacatacata 18259418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 24443560 - 24443621
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||| ||||  |||||||||||||||||||||| ||||||||||||||    
T  24443560 tgtataaacttaatatcttatattcatgacccatgagatgtggtcatcagtctacatacata 24443621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 42150315 - 42150372
Alignment:
Q  32 tagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| || | | ||||||||||    
T  42150315 tagacttaatatctcatatctatgacccatgagatgtggttatcaatttacatacata 42150372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 24443774 - 24443829
Alignment:
Q  35 acttaatatctcatatct--atgacccatgagatgtggtcattagtctacatacat 88  Q
    ||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||    
T  24443774 acttaatatcttatatattcatgacccatgagatgtggtcattagtctacatacat 24443829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 25845710 - 25845770
Alignment:
Q  29 gtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||| ||||||||| ||||    
T  25845710 gtatagacttaatatctcatattcatgagcaatgagatgtggtcatcagtctacatgcata 25845770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 25846129 - 25846189
Alignment:
Q  29 gtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||| ||||||||| ||||    
T  25846129 gtatagacttaatatctcatattcatgagcaatgagatgtggtcatcagtctacatgcata 25846189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 25846272 - 25846429
Alignment:
Q  132 tgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaagagt 231  Q
    |||||| |||| ||||||||||||||||| | ||| | | |||||| |||||||||||| ||  || ||||||||  | || | ||| |||| ||||| |    
T  25846272 tgttaaggtaacctaatgattaagtcacatttaatgttccattacatgaactatctattttagagattttattaatcttacaacaaacataataaagaat 25846371  T
Q  232 gtcatata----ttatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||||||    |||||||||||||||||   |||||||||  |||| ||||||||||    
T  25846372 gtcatatatattttatttaataataaaagtcatgatacatagcataaatttaacataa 25846429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 24443863 - 24443920
Alignment:
Q  88 tattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatct 145  Q
    ||||||||||||| |||||| | ||||||||||| | || ||||||||||||||||||    
T  24443863 tattaaagcttgattacggacacatttaagaatatcgttttttatgttaatgtaatct 24443920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2297356 - 2297324
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  2297356 tttttgcttatattagtgaccggagggtgtata 2297324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 2360474 - 2360442
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  2360474 tttttgcttatattagtgaccggagggtgtata 2360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8595262 - 8595294
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  8595262 tttttgcttatattagtgaccggagggtgtata 8595294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10422923 - 10422955
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  10422923 tttttgcttatattagtgaccggagggtgtata 10422955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38238808 - 38238776
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  38238808 tttttgcttatattagtgaccggagggtgtata 38238776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38238899 - 38238931
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  38238899 tttttgcttatattagtgaccggagggtgtata 38238931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10414964 - 10414933
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  10414964 tttttgcttatattagtgaccggagggtgtat 10414933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 282
Target Start/End: Original strand, 24443932 - 24444045
Alignment:
Q  172 attacacgaactatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataaga 268  Q
    |||||||||||||||||||||| | | ||||||||  | |  | |||||||| ||||| ||  |||||||||| ||||||||||    ||||| |||| |    
T  24443932 attacacgaactatctattctatgaattttattaatcttataacaaatataataaagaatgcaatatattattcaataataaaaatcatgatagataaca 24444031  T
Q  269 taagtttaacataa 282  Q
    ||||||||||||||    
T  24444032 taagtttaacataa 24444045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24935917 - 24935886
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  24935917 tttttgcttatattagtgaccggagggtgtat 24935886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34275307 - 34275338
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  34275307 tttttgcttatattagtgaccggagggtgtat 34275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34703558 - 34703589
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  34703558 tttttgcttatattagtgaccggagggtgtat 34703589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 46648743 - 46648774
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||||||||||||||    
T  46648743 ttttgcttatattagtgaccggagggtgtata 46648774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4406104 - 4406066
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtatagactta 39  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  4406104 ttttttcttatattagtgaccggagggtgtatatactta 4406066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 8447742 - 8447712
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  8447742 tttttgcttatattagtgaccggagggtgta 8447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 8571497 - 8571527
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  8571497 tttttgcttatattagtgaccggagggtgta 8571527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 16777916 - 16777886
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  16777916 ttttgcttatattagtgaccggagggtgtat 16777886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 28949390 - 28949420
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  28949390 tttttgcttatattagtgaccggagggtgta 28949420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 31190676 - 31190734
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatac 86  Q
    |||||||| || |||||||||||| |||||||||||||||| ||| | || ||||||||    
T  31190676 tgtatagatttgatatctcatatccatgacccatgagatgtagtcgtcagcctacatac 31190734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 8571406 - 8571377
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgta 31  Q
    ||||||||||||||||||||||||||||||    
T  8571406 ttttgcttatattagtgaccggagggtgta 8571377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 15170262 - 15170319
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    ||||||||||||||||  |||||| |||||| || ||||||||| || ||||||||||    
T  15170262 tgtatagacttaatatgacatatccatgacctataagatgtggtgatcagtctacata 15170319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4407734 - 4407766
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||| ||||||||||||||||||||||||||    
T  4407734 tttttgtttatattagtgaccggagggtgtata 4407766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25245258 - 25245290
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  25245258 tttttgcttataatagtgaccggagggtgtata 25245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27554612 - 27554644
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||| |||||||||||||    
T  27554612 tttttgcttatattagtgatcggagggtgtata 27554644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 48813825 - 48813767
Alignment:
Q  238 tattatttaataataaaagt---gatacataagataagtttaacataacctaatggcct 293  Q
    ||||||| ||||||||||||   ||||||||||||| ||||||||||| ||| ||||||    
T  48813825 tattattcaataataaaagtcatgatacataagataggtttaacataaactattggcct 48813767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 5e-65; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 1941700 - 1941501
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||| ||| ||||||||||||| || |||||| || |||||||| |||||||||||||||| |||||   ||||||||||||||    
T  1941700 catattaaagcttgactacgaatacatttaagaataacgttctttatgatactgtaatctcatgattaagtcacacttaatatattattacacgaactat 1941601  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  1941600 ctattctaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataaaataagtttaacataa 1941501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 9487527 - 9487328
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||| |||||||||||||| ||||||||||||| || |||||| ||| ||||||| |||||||||||||||| |||||   ||||||||||||||    
T  9487527 catattaaatcttgactacggatacatttaagaataacgttctttatgataaagtaatctcatgattaagtcacacttaatatattattacacgaactat 9487428  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  9487427 ctattctaagggctttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacataa 9487328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 11420992 - 11420793
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||| ||||||||||||| ||||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||   ||| ||||||||||    
T  11420992 catattaaagtttgactacggatacatttaagaatagcgttctttatgttaatgtaatctaatgattaaatcacacttaatatatcattgcacgaactat 11420893  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||| || ||||||||||||||| || | |||||||| |||||||| |||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  11420892 ctattttagggactttattaacattacaaaaaatataataaagagtgccatatattatttaataataaaagtcatgatacataacataagtttaacataa 11420793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 3369350 - 3369560
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||||||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  3369350 catattaaagctttgactacggatatatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 3369449  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  3369450 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 3369548  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  3369549 aactattggcct 3369560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 2676988 - 2676778
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  2676988 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 2676889  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  2676888 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 2676790  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  2676789 aactattggcct 2676778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 15461472 - 15461262
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  15461472 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 15461373  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  15461372 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 15461274  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  15461273 aactattggcct 15461262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 15814996 - 15814786
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  15814996 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 15814897  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  15814896 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 15814798  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  15814797 aactattggcct 15814786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 4676310 - 4676520
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  4676310 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 4676409  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||| | |||||||||||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  4676410 tctattctaaggactttattaacatta-tctaaatattataaagagtgtcatatattattcaataataaaagtcatgatacataagatagatttaacata 4676508  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  4676509 aactattggcct 4676520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 18111370 - 18111580
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  18111370 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 18111469  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||| ||||||    
T  18111470 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggttcaacata 18111568  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  18111569 aactattggcct 18111580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 20243912 - 20243702
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  20243912 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 20243813  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  20243812 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 20243714  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  20243713 aactattggcct 20243702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 26531588 - 26531378
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  26531588 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 26531489  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| |||||| |||    
T  26531488 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaatata 26531390  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  26531389 aactattggcct 26531378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 30040800 - 30040999
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||| |||||||||  |||| |||||||||||   || |||||||||||||||||| |||||||||||||||| ||||| | ||||||||||||||    
T  30040800 catattaacgcttgactatagatacatttaagaatagtgttctttatgttaatgtaatctcatgattaagtcacacttaatatactattacacgaactat 30040899  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||| | ||||||||||||| || | |||||||| ||||||| |||||||||| || ||||||||||   |||||||||| |||||||||||||||    
T  30040900 ctattctaggaactttattaacattacaacaaatataataaagagtatcatatattaattgataataaaagtcatgatacataacataagtttaacataa 30040999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 97 - 293
Target Start/End: Complemental strand, 34975514 - 34975316
Alignment:
Q  97 ttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaagg 196  Q
    ||||||||  ||| ||||||||||| | || |||||| ||||||||||| |||||||||||||||| |||||   ||||||||||| |||||||||||||    
T  34975514 ttgactacaaatacatttaagaatagcgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaaccatctattctaagg 34975415  T
Q  197 actttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||| | |||||||||||   |||||||||||||||||||||||||| ||| ||||||    
T  34975414 actttattaacatta-tctaaatataataaagagtgtcatatattaatcaataataaaagtcatgatacataagataagtttaacataaactattggcct 34975316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 17300286 - 17300496
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||| ||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   ||| |||||||||    
T  17300286 catattaaagctttgactatggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattatttcacgaacta 17300385  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaagt---gatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| ||||||||||||   ||||||||||||| ||||||||||    
T  17300386 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcaagatacataagataggtttaacata 17300484  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  17300485 aactattggcct 17300496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 18163137 - 18162927
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  18163137 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 18163038  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||| ||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  18163037 tctattctaaggactttattaacatta-tctaaatgtaataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 18162939  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  18162938 aactattggcct 18162927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 38816688 - 38816478
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  38816688 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 38816589  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  38816588 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 38816490  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  38816489 aactattggcct 38816478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 106 - 293
Target Start/End: Original strand, 11484265 - 11484454
Alignment:
Q  106 gatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttatta 205  Q
    |||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||| |||||||||||||||||||||||||||    
T  11484265 gatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacatgaactatctattctaaggactttatta 11484364  T
Q  206 acatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    |||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||| ||| ||||||    
T  11484365 acatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacataaactattggcct 11484454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 5870393 - 5870177
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| |||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  5870393 catattaaagctttgactacagatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 5870294  T
Q  185 tctattctaaggactttattaacatcactataaatat------aacaaagagtgtcatatattatttaataataaaag---tgatacataagataagttt 275  Q
    ||||||||||||||||||||||||| | | |||||||      || |||||||||||||||||||| ||||||||| |   |||||||||||||| ||||    
T  5870293 tctattctaaggactttattaacatta-tctaaatataataaaaataaagagtgtcatatattattcaataataaaggtcatgatacataagataggttt 5870195  T
Q  276 aacataacctaatggcct 293  Q
    ||||||| ||| ||||||    
T  5870194 aacataaactattggcct 5870177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 19365494 - 19365389
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| ||||||||||| | || |||| ||||||||||||| |||||||||||||||| ||||| | |||||||||||||||    
T  19365494 atattaaagcttgactacggatacatttaagaatagcgttctttacgttaatgtaatctcatgattaagtcacacttaatattccattacacgaactatc 19365395  T
Q  187 tattct 192  Q
    ||||||    
T  19365394 tattct 19365389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 249
Target Start/End: Complemental strand, 19362391 - 19362229
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||||||||||||| |||| ||||||||| | | ||  ||| ||||||||||||| |||||||| ||||||| |||||   |||||| ||||||||    
T  19362391 atattaaagcttgactactgatacatttaagaaaagcgttccttacgttaatgtaatctcatgattaactcacacttaatattacattacatgaactatc 19362292  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaata 249  Q
    ||||||| | |||||||| |  | || | |||||||| ||||| |||||||||||||||||||    
T  19362291 tattctaggaactttattgatcttacaacaaatataataaagaatgtcatatattatttaata 19362229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 4546056 - 4545948
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||| |||||||||| ||||||||||||| || |||||| ||| ||| ||| |||| ||||||||||| |||||   ||||||||||||||    
T  4546056 catattaaagcttaactacggatacatttaagaataacgttctttatgataaagtattctcatgactaagtcacacttaatatattattacacgaactat 4545957  T
Q  186 ctattctaa 194  Q
    |||||||||    
T  4545956 ctattctaa 4545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 4676216 - 4676277
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  4676216 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 4676277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 11421085 - 11421024
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  11421085 tgtatagacttaatatctcatatctatgactcatgagatgtggtcatcagtctacatacata 11421024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 20244006 - 20243945
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20244006 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 20243945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 30040707 - 30040768
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  30040707 tgtatagacttaatatctcatatctatgacccatgagatgtggtcatcagtctatatacata 30040768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 2677082 - 2677021
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2677082 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 2677021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 3369256 - 3369317
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  3369256 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 3369317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 5870487 - 5870426
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  5870487 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 5870426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 15461566 - 15461505
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15461566 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 15461505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 15815090 - 15815029
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  15815090 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 15815029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 17300192 - 17300253
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  17300192 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 17300253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18111276 - 18111337
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18111276 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 18111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18163231 - 18163170
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  18163231 tgtatagacttaatatctcatatctatgacccatgagatgcgatcatcagtctacatacata 18163170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 34975620 - 34975559
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  34975620 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 34975559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 291
Target Start/End: Original strand, 5528809 - 5529013
Alignment:
Q  90 ttaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctat 189  Q
    |||||||||||||| | | |  ||||||||||   || ||| ||||||||||||||  |||||||||| |||| ||||| | || ||| | |||||||||    
T  5528809 ttaaagcttgactatgaacacttttaagaatatagttctttgtgttaatgtaatctcgtgattaagtcgcactgaatattccatcacatgcactatctat 5528908  T
Q  190 tctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataaccta 286  Q
    |||| ||| ||||||||  | || | || ||||| ||| | ||||||||  |||||||||||||| |   |||||||||| ||||||||||||||| |||    
T  5528909 tctagggattttattaatcttacaacaattataataaaaaatgtcatattatatttaataataaatgtcatgatacataacataagtttaacataaacta 5529008  T
Q  287 atggc 291  Q
     ||||    
T  5529009 ttggc 5529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 1941793 - 1941732
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||    
T  1941793 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcagtctatatacata 1941732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 4545949 - 4545878
Alignment:
Q  225 aaagagtgtcatatattatttaataataaaagt---gatacataagataagtttaacataacctaatggcct 293  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||| ||| ||||||    
T  4545949 aaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacataaactattggcct 4545878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 26531682 - 26531621
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  26531682 tgtatagccttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 26531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 293
Target Start/End: Complemental strand, 9537936 - 9537728
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||  ||||||||  ||| ||||||||||| | || ||||||||||||||| ||  | ||  |||||||||  |||| | ||| |||||||||||    
T  9537936 atattaaatattgactacatatacatttaagaatagcgttctttatgttaatgtaaactctttatagagtcacacttgatattccattgcacgaactatc 9537837  T
Q  187 tattcta-aggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaa--agtgatacataagataagtttaacataac 283  Q
    |||||||  ||||||||||||  | || | || ||||| ||| | || |||||||||||||||||||||    |||||||||| |||| ||||||||||     
T  9537836 tattctaggggactttattaatcttacaacaattataataaa-aatgacatatattatttaataataaagtcatgatacataacataaatttaacataaa 9537738  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  9537737 ctattggcct 9537728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 5616463 - 5616403
Alignment:
Q  29 gtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  5616463 gtatatacttaacatctcatatttatgacccatgagatgtggtcatcaatctacatacata 5616403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 9538028 - 9537982
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcat 74  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  9538028 tgtatagacttaatatctcatatccatgactcatgagatgtggtcat 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 4546149 - 4546088
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| | | || |||| |||||||||    
T  4546149 tgtatagacttaatatctcatatctataacccatgagatgcgattatcagtcaacatacata 4546088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9487620 - 9487559
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| | | || |||| |||||||||    
T  9487620 tgtatagacttaatatctcatatctataacccatgagatgcgtttatcagtcaacatacata 9487559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 32636547 - 32636492
Alignment:
Q  34 gacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||| |||  ||||||||||||||| |||||| ||||||||||||||    
T  32636547 gacttaatatctcgtattcatgacccatgagatgcggtcatcagtctacatacata 32636492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 19365588 - 19365534
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctac 82  Q
    |||||||| |||||||||||||   |||||||||||||||||||||| |||||||    
T  19365588 tgtatagatttaatatctcatactcatgacccatgagatgtggtcatcagtctac 19365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19362479 - 19362418
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||| ||||||||||||||  |||||||||||||||  ||||| | ||||||||||||    
T  19362479 tgtatagatttaatatctcatattcatgacccatgagatgcagtcatcaatctacatacata 19362418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49481995 - 49482028
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtatag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  49481995 tttttgcttatattagtgaccggagggtgtatag 49482028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21884043 - 21884011
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  21884043 tttttgcttatattagtgaccggagggtgtata 21884011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 23056408 - 23056507
Alignment:
Q  107 atatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaa 206  Q
    |||| ||||||||||| ||| ||||| | |||||||||| | ||||||||| |||| ||| |   |||||  ||||||| ||||||| ||||||||||||    
T  23056408 atatctttaagaataatattctttatatgaatgtaatcttacgattaagtctcacttaatgtctcattacttgaactatatattctagggactttattaa 23056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 56328474 - 56328443
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  56328474 tttttgcttatattagtgaccggagggtgtat 56328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 28702085 - 28702055
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  28702085 ttttgcttatattagtgaccggagggtgtat 28702055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 28702177 - 28702207
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  28702177 ttttgcttatattagtgaccggagggtgtat 28702207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 52817682 - 52817712
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  52817682 tttttgcttatattagtgaccggagggtgta 52817712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 55087826 - 55087856
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  55087826 tttttgcttatattagtgaccggagggtgta 55087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 56328565 - 56328595
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  56328565 tttttgcttatattagtgaccggagggtgta 56328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21798195 - 21798134
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||| || |||||||||||| || ||  ||||||||| ||||| ||||||||||||||    
T  21798195 tgtatagaattgatatctcatatccataacatatgagatgtagtcatcagtctacatacata 21798134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 54713123 - 54713091
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  54713123 tttttgcttataatagtgaccggagggtgtata 54713091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 8e-64; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 87 - 293
Target Start/End: Complemental strand, 8612891 - 8612682
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  8612891 atattaaagcttgactacggatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 8612792  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  8612791 tattctaaggactttattaacattactatgaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 8612692  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  8612691 ctattggcct 8612682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 88 - 293
Target Start/End: Original strand, 20736656 - 20736864
Alignment:
Q  88 tattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatct 187  Q
    ||||||||||||||||| |||| ||||||||||||  || |||||||||||||||||| |||||||||||| ||| ||||| | ||||||||||||||||    
T  20736656 tattaaagcttgactacagatacatttaagaataatgttctttatgttaatgtaatctcatgattaagtcaaacttaatataccattacacgaactatct 20736755  T
Q  188 attctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacc 284  Q
    |||||| | ||||||||||||| || | |||||||| |||||||| |||||||||||||||||||||||   |||||||||| ||||| |||||||||||    
T  20736756 attctaggaactttattaacattacaacaaatataataaagagtggcatatattatttaataataaaagtcatgatacataacataagattaacataacc 20736855  T
Q  285 taatggcct 293  Q
    || ||||||    
T  20736856 tattggcct 20736864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 13995270 - 13995480
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| |||| | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  13995270 catattaaagctttgactacggatacatttaagaatagcattctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 13995369  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  13995370 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataggtttaacata 13995468  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  13995469 aactattggcct 13995480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 87 - 282
Target Start/End: Original strand, 5758807 - 5759005
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||||||| |||||||||| |||||| ||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  5758807 atattaaagctttactacggatacatttaataatattgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 5758906  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||   | ||||||||||||||||||||||||    
T  5758907 tattctaagaactttattaacattactataaatataataaagagtatcatatattattcaataataaaagtcatcatacataagataagtttaacataa 5759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 16789046 - 16788836
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  16789046 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 16788947  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  16788946 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 16788848  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  16788847 aactattggcct 16788836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 18020168 - 18020378
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || ||||   ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  18020168 catattaaagctttgactacggatacatttaagaatagcgttctttaaaataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 18020267  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | | ||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  18020268 tctattctaaggactttattaacatta-tctgaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 18020366  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  18020367 aactattggcct 18020378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 1586435 - 1586645
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| |||||||||||   || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  1586435 catattaaagctttgactacggatacatttaagaatagtgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 1586534  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  1586535 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 1586633  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  1586634 aactattggcct 1586645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 22860215 - 22860425
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  22860215 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 22860314  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  22860315 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 22860413  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  22860414 aactattggcct 22860425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 83 - 293
Target Start/End: Original strand, 27508671 - 27508885
Alignment:
Q  83 atacatattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaa 181  Q
    |||||||||||||||| ||||||||||| ||||||||||| | || | ||   ||||||||||| |||||||||||||||| |||||   ||||||||||    
T  27508671 atacatattaaagctttgactacggatacatttaagaatagcgttctataatataatgtaatctcatgattaagtcacacttaatatattattacacgaa 27508770  T
Q  182 ctatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatt-taataataaaag---tgatacataagataagtttaa 277  Q
    |||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||  |||||||||||   |||||||||| ||| ||||||    
T  27508771 ctatctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattacaataataaaagtcatgatacataaaataggtttaa 27508869  T
Q  278 cataacctaatggcct 293  Q
    ||||| ||| ||||||    
T  27508870 cataaactattggcct 27508885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 17120775 - 17120972
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||| | ||||| ||||||||||||| || |||||| |||| |||||| |||| ||||||||||| |||||   |||| |||||||||    
T  17120775 catattaaagcttgacaatggatacatttaagaataacgttctttatgataatataatctcatgactaagtcacacttaatatattattatacgaactat 17120874  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||| ||| ||||||||||| | ||||||||||| |||||  ||||||||||||| |||||||||||   ||||||||||||| ||||||||||||    
T  17120875 ctattctagggattttattaacattattataaatataataaaga--gtcatatattattcaataataaaagtcatgatacataagatgagtttaacataa 17120972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 27528260 - 27528471
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | ||   ||||||||| | |||||||||||||||| |||||   |||||||||||||    
T  27528260 catattaaagctttgactacggatacatttaagaatagcgttctataatataatgtaatttcatgattaagtcacacttaatatattattacacgaacta 27528359  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatt-taataataaaag---tgatacataagataagtttaacat 280  Q
    ||||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||||  |||||||||||   |||||||||||||| |||||||||    
T  27528360 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattacaataataaaagtcatgatacataagataggtttaacat 27528458  T
Q  281 aacctaatggcct 293  Q
    || ||| ||||||    
T  27528459 aaactattggcct 27528471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 87 - 257
Target Start/End: Original strand, 22560511 - 22560683
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataa--cattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||||||| ||||| ||||||| ||||  |||| || |||||||||| |||| |||||| ||||||||| ||||| | |||||||||||||    
T  22560511 atattaaagcttgactatggatacatttaaggataaaacattcttaatgttaatgtcatctcatgattgagtcacacttaatatcccattacacgaacta 22560610  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaagt 257  Q
    |||||||||||||| ||||||| ||  | |||||||||| ||| |||||||||||||||||||||||| ||||    
T  22560611 tctattctaaggaccttattaatattgcaataaatataataaaaagtgtcatatattatttaataatagaagt 22560683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 14074455 - 14074245
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||  ||| |||||||| ||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||| ||||||    
T  14074455 catattaaagctttgactacatatacatttaagactagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacatgaacta 14074356  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||| ||   ||||||||||||||  |||||||||    
T  14074355 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataatagtcatgatacataagatatttttaacata 14074257  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  14074256 aactattggcct 14074245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 295
Target Start/End: Complemental strand, 19218405 - 19218195
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||||||||||||| |||   |||||||||| |||| |||||| ||||||||||  |||||||||||||||| ||||| | |||||||||||||||    
T  19218405 atattaaagcttgactactgatgc-tttaagaatagcattctttatgataatgtaatcacatgattaagtcacacttaatattctattacacgaactatc 19218307  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataac 283  Q
    |||||||  |||||||||||  | || | |||||||| ||||| || |||||||||||||||||||||||   |||||||||  |||| ||||||||||     
T  19218306 tattctagagactttattaatcttacaacaaatataataaagaatgccatatattatttaataataaaagtcatgatacatagcataaatttaacataaa 19218207  T
Q  284 ctaatggcctat 295  Q
    ||| ||| ||||    
T  19218206 ctattggactat 19218195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 111 - 293
Target Start/End: Complemental strand, 13947704 - 13947519
Alignment:
Q  111 atttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatc 210  Q
    ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||     
T  13947704 atttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaactatctattctaaggactttattaacatt 13947605  T
Q  211 actataaatataacaaagagtgtcatatattatt-taataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    | | ||||||||| |||||||| |||||||||||  |||||||||||   |||||||||||||| ||||||||||| ||| ||||||    
T  13947604 a-tctaaatataataaagagtgccatatattattacaataataaaagtcatgatacataagataggtttaacataaactattggcct 13947519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 14997000 - 14996888
Alignment:
Q  172 attacacgaactatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataaga 268  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||||||| |||||| ||||   | ||||||||||    
T  14997000 attacacgaactatctattctaaggactttattaaaatta-tataaatataataaagagtgtcatatattattcaataattaaagtcataatacataaga 14996902  T
Q  269 taagtttaacataa 282  Q
    ||||||||||||||    
T  14996901 taagtttaacataa 14996888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 246
Target Start/End: Complemental strand, 21994563 - 21994404
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||| ||||| ||||| |||||||||||   || ||||| |||||||||||| |||||||||||||| | ||||| | |||||||||||||||    
T  21994563 atattaaagctcgactatggatacatttaagaatagtgttctttatattaatgtaatctcatgattaagtcacaattaatataccattacacgaactatc 21994464  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattattta 246  Q
    |||| |  |||||||||||| || || | || ||||| ||||||| ||||||||||||||    
T  21994463 tattattgggactttattaatattacaacaagtataataaagagtatcatatattattta 21994404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 1586341 - 1586402
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1586341 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 1586402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 14074549 - 14074488
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  14074549 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 14074488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 8612984 - 8612923
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  8612984 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcagtctacatacata 8612923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 13995176 - 13995237
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  13995176 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 13995237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 16789140 - 16789079
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  16789140 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 16789079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 18020074 - 18020135
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  18020074 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 18020135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22860121 - 22860182
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22860121 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 22860182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27508580 - 27508641
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27508580 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 27508641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27528166 - 27528227
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27528166 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 27528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 4073551 - 4073432
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| |||||||||||||  |||||||||||  || |||   |||||||||||| |||||||||||||||| ||| | | |||| | ||||||||    
T  4073551 atattaaagtttgactacggatacttttaagaataatgttctttccattaatgtaatctcatgattaagtcacacttaatgttccattatatgaactatc 4073452  T
Q  187 tattctaaggactttattaa 206  Q
     |||||| ||||||||||||    
T  4073451 aattctatggactttattaa 4073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19218498 - 19218437
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||    
T  19218498 tgtatagacttaatatctcatattcatgacccatgaggtgtggtcatcagtctacatacata 19218437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 5758716 - 5758775
Alignment:
Q  30 tatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||    
T  5758716 tatagacttaatatctcatatctataacccatgagatgcagtcatcagtctacatacata 5758775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 20736563 - 20736622
Alignment:
Q  30 tatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  20736563 tataaacttaatatctcatatctataacacatgagatgtggtcatcagtctacatacata 20736622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22560417 - 22560478
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||    
T  22560417 tgtataaacttaatatctcatatccatgacccatgagatgtggtcatcggtctacatgcata 22560478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8146064 - 8146096
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  8146064 tttttgcttatattagtgaccggagggtgtata 8146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31536336 - 31536304
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  31536336 tttttgcttatattagtgaccggagggtgtata 31536304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6560682 - 6560651
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  6560682 tttttgcttatattagtgaccggagggtgtat 6560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 282
Target Start/End: Original strand, 10359403 - 10359560
Alignment:
Q  128 tttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaa 227  Q
    ||||| |||||||||||| |||||||||||||||| ||||| | || |||  |||||| |||| ||  |||||||||||  | |  | || ||| | |||    
T  10359403 tttatattaatgtaatctcatgattaagtcacacttaatattccatcacatcaactatatattatagagactttattaatcttataacaattatgataaa 10359502  T
Q  228 gagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataa 282  Q
     | |||||||| |||||||||| |||||    | ||||||| ||||||||||||||||    
T  10359503 taatgtcatattttatttaatattaaaaatcataatacatacgataagtttaacataa 10359560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 17773616 - 17773647
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  17773616 tttttgcttatattagtgaccggagggtgtat 17773647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21506488 - 21506457
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  21506488 tttttgcttatattagtgaccggagggtgtat 21506457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 6560772 - 6560802
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  6560772 tttttgcttatattagtgaccggagggtgta 6560802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 8145973 - 8145943
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  8145973 tttttgcttatattagtgaccggagggtgta 8145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 14310636 - 14310666
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  14310636 tttttgcttatattagtgaccggagggtgta 14310666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 30397839 - 30397869
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  30397839 tttttgcttatattagtgaccggagggtgta 30397869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 31398251 - 31398221
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  31398251 tttttgcttatattagtgaccggagggtgta 31398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 10359283 - 10359339
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||| | ||||||||    
T  10359283 tgtatagacttaatatctcacattcatga-ccatgagatgtggtcatcactctacata 10359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 23846645 - 23846681
Alignment:
Q  53 atgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||  ||||||||||||||||||||    
T  23846645 atgacccatgagatgcagtcattagtctacatacata 23846681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 28577626 - 28577594
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||| |||||||||||    
T  28577626 tttttgcttatattagtgacctgagggtgtata 28577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 8e-64; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 7865760 - 7865969
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  7865760 atattaaagcttgactacggatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 7865859  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  7865860 tattctaaggactttattaacattactatgaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 7865959  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  7865960 ctattggcct 7865969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 12765320 - 12765529
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  12765320 atattaaagcttgactacggatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 12765419  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  12765420 tattttaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 12765519  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  12765520 ctattggcct 12765529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 12704204 - 12704413
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| |||||||||||   || |||||| ||||||||||| |||||||||||||| | |||||   |||||||||||||||    
T  12704204 atattaaagcttgactacggatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacaattaatatattattacacgaactatc 12704303  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  12704304 tattttaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 12704403  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  12704404 ctattggcct 12704413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 26245078 - 26244868
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||| ||| |||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||   |||||| |||||||    
T  26245078 catattaaagcttgattacagatacatttaagaataacattctttatgataatgtaatctcatgattaagtcacacttaatatattattacatgaactat 26244979  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||| | ||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||   ||||| ||||||||||||||||||||    
T  26244978 ctattcgagggactttattaacattactataaatataaaaaagagtatcatatattattcaataataaaagtcatgatatataagataagtttaacataa 26244879  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  26244878 actattggcct 26244868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 89 - 293
Target Start/End: Complemental strand, 22941222 - 22941015
Alignment:
Q  89 attaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatct 187  Q
    |||||||||| ||||||||||| |||||||||||||||| |||| | ||||||||||| |||||||||||||||| |||||   ||||||||||||||||    
T  22941222 attaaagctttgactacggatacatttaagaataacattctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaactatct 22941123  T
Q  188 attctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacc 284  Q
    |||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||| ||||||||||| |    
T  22941122 attctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataggtttaacataaac 22941024  T
Q  285 taatggcct 293  Q
    || ||||||    
T  22941023 tattggcct 22941015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 9812063 - 9812272
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| |||||| ||||   || |||||| ||||||||||| |||||||||||||| | |||||   |||||||||||||||    
T  9812063 atattaaagcttgactacggatacatttaataatagtgttctttatgataatgtaatctcatgattaagtcacaattaatatattattacacgaactatc 9812162  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  9812163 tattttaaggactttattagcattactataaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 9812262  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  9812263 ctattggcct 9812272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 25805712 - 25805922
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||||||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  25805712 catattaaagcttcgactacggatatatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 25805811  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  25805812 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 25805910  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  25805911 aactattggcct 25805922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 5097627 - 5097428
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||| |||||||||  ||| ||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||   |||||| |||||||    
T  5097627 catattaaaacttgactacaaatacatttaagaataacgttctttatgttaatgtaatctcatgattaagtcacacttaatatatcattacatgaactat 5097528  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||| | ||||||||||||||| ||||||||||||| ||| | || ||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  5097527 ctattccagggactttattaacattactataaatataataaaaattgccatatattattcaataataaaagtcatgatacataagataagtttaacataa 5097428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 31096791 - 31096581
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||||| || |||| | ||||||||||  |||||||||||||||| |||||   |||||||||||||    
T  31096791 catattaaagctttgactacggatacatttaagaataacgttctttaagataatgtaatcccatgattaagtcacacttaatatattattacacgaacta 31096692  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||| ||   |||||||||||||||||||||||||    
T  31096691 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataagagtcatgatacataagataagtttaacata 31096593  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  31096592 aactattggcct 31096581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 20941002 - 20940792
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||||| || |||| | ||||||||||| |||||||||||||| | |||||   |||||||||||||    
T  20941002 catattaaagctttgactacggatacatttaagaataacgttctttaagataatgtaatctcatgattaagtcacagttaatatattattacacgaacta 20940903  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    |||||||||||||| |||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  20940902 tctattctaaggacattattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 20940804  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  20940803 aactattggcct 20940792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 31874 - 31664
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  31874 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 31775  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||| ||| ||||||||||    
T  31774 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataaaataggtttaacata 31676  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  31675 aactattggcct 31664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 23545897 - 23545687
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  23545897 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 23545798  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||| | |||||||||||   |||||||||||||| ||||||||||    
T  23545797 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattaatcaataataaaagtcatgatacataagataggtttaacata 23545699  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  23545698 aactattggcct 23545687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 24933633 - 24933843
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  24933633 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 24933732  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  24933733 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 24933831  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  24933832 aactattggcct 24933843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 12789990 - 12790200
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  12789990 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 12790089  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    |||||||||||||||||||||| || | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  12790090 tctattctaaggactttattaaaatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 12790188  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  12790189 aactattggcct 12790200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 26130020 - 26130231
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| ||||||||| | | || || ||||||| ||||| | | |||||||||||||| ||||| | |||||||||||||||    
T  26130020 atattaaagcttgactacggatacatttaagaagagcgttcttaatgttaaagtaatattaggattaagtcacactaaatattccattacacgaactatc 26130119  T
Q  187 tattctaaggactttattaacatcactataaatat--aacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    |||||||  ||||||||||| || || | || |||  || ||||||||||||||||||||||||||||||||   || ||||||| ||||||||| ||||    
T  26130120 tattctagagactttattaatattacaacaagtattaaataaagagtgtcatatattatttaataataaaagtcatgttacataacataagtttatcata 26130219  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  26130220 aactattggcct 26130231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 255
Target Start/End: Complemental strand, 39535440 - 39535271
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||| |||| |||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| ||||| | |||| | |||||||    
T  39535440 catattaaagtttgagtacggatacatttaagaatatcgttctttaaggtaatgtaatctcatgattaagtcacacttaatataccattatatgaactat 39535341  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa 255  Q
    |||||| | ||||||||||||||| |  | |||||||| |||||||||||||||||||||||||| ||||    
T  39535340 ctattccagggactttattaacattataacaaatataataaagagtgtcatatattatttaataaaaaaa 39535271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 20100570 - 20100777
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| || |||||| ||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||| | |||| | ||||||||    
T  20100570 atattaaagtttaactacgaatacatttaagaataacgttatttacgttaatgtaatctcatgattaagtcacacttaatattccattatatgaactatc 20100669  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataac 283  Q
    ||||||| ||||||||||||  | || | |||||||| ||||| ||||  |||||||| |||||||||||   |||||||||| |||||| | ||||||     
T  20100670 tattctatggactttattaatcttacaacaaatataataaagaatgtc--atattattgaataataaaagtcatgatacataacataagtctgacataaa 20100767  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  20100768 ctattggcct 20100777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 5097720 - 5097659
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5097720 tgtatagacttaatatctcatatctatgacccatgagatgtagtcatcagtctacatacata 5097659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 9811970 - 9812031
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9811970 tgtatagacttaatatctcatatctataacccatgagatgtggtcatcagtctacatacata 9812031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 12704111 - 12704172
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  12704111 tgtatagacttaatatctcatatctataacccatgagatgtggtcatcagtctacatacata 12704172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 12765227 - 12765288
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  12765227 tgtatagacttaatatctcatatctataacccatgagatgtggtcatcagtctacatacata 12765288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 24933539 - 24933600
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  24933539 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 24933600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 31096885 - 31096824
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31096885 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 31096824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 31968 - 31907
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  31968 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 31907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 7865667 - 7865728
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  7865667 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcagtctacatacata 7865728  T

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Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 12789896 - 12789957
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12789896 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 12789957  T

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Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 20941096 - 20941035
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20941096 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 20941035  T

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Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 23545991 - 23545930
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  23545991 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 23545930  T

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Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 25805618 - 25805679
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25805618 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 25805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 20100478 - 20100537
Alignment:
Q  30 tatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  20100478 tatagacttaatatctcatattcatgacccatgagatgtgatcatcagtctacatacata 20100537  T

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Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 22941319 - 22941258
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| |||| |||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  22941319 tgtataaacttgatatctcatatctatgacccatgagatacggtcatcagtctacatacata 22941258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 26129926 - 26129987
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||    
T  26129926 tgtatagacttaatatctaatatccataacccatgagatatggtaattagtctacatacata 26129987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 26245171 - 26245110
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| |||||||||||||||||||||||||||||||||   |||| ||||||||||||||    
T  26245171 tgtataaacttaatatctcatatctatgacccatgagatgcaatcatcagtctacatacata 26245110  T

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Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 257
Target Start/End: Original strand, 31652136 - 31652285
Alignment:
Q  112 tttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaat-atg--caattac-acgaactatctattctaaggactttattaac 207  Q
    ||||||||||| ||| |||||||||||||||||| | ||||||||| |||| ||| |||  | || || || |||||||||||||| ||||||||||||     
T  31652136 tttaagaataatattctttatgttaatgtaatcttacgattaagtctcacttaatgatgttccatcacaacaaactatctattctagggactttattaat 31652235  T
Q  208 atcactataaatataacaaagagtgtcatatattatttaataataaaagt 257  Q
     | || | |||||||| ||||| ||   ||| ||||||||||||||||||    
T  31652236 cttacaacaaatataataaagaatgctttattttatttaataataaaagt 31652285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 31267895 - 31267956
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||  |||||  |||||||||||||||  |||||||||||||    
T  31267895 tgtatagacttaatatctcatattcatgactaatgagatgtggtcatccgtctacatacata 31267956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 31652017 - 31652078
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||||||||||||| |||||  | ||||| ||||||||||||||    
T  31652017 tgtataaacttaatatctcatatctatgacccgtgagacttagtcatcagtctacatacata 31652078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3851478 - 3851510
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  3851478 tttttgcttatattagtgaccggagggtgtata 3851510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6763812 - 6763844
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  6763812 tttttgcttatattagtgaccggagggtgtata 6763844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 20019864 - 20019896
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtatag 34  Q
    |||||||||||||||||||||||||||||||||    
T  20019864 ttttgcttatattagtgaccggagggtgtatag 20019896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23914866 - 23914834
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  23914866 tttttgcttatattagtgaccggagggtgtata 23914834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41180328 - 41180360
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  41180328 tttttgcttatattagtgaccggagggtgtata 41180360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 5259410 - 5259379
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  5259410 tttttgcttatattagtgaccggagggtgtat 5259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23914956 - 23914987
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  23914956 tttttgcttatattagtgaccggagggtgtat 23914987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26300136 - 26300105
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  26300136 tttttgcttatattagtgaccggagggtgtat 26300105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1996872 - 1996842
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  1996872 tttttgcttatattagtgaccggagggtgta 1996842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1996963 - 1996993
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  1996963 tttttgcttatattagtgaccggagggtgta 1996993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 5259500 - 5259530
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  5259500 tttttgcttatattagtgaccggagggtgta 5259530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25772179 - 25772149
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  25772179 tttttgcttatattagtgaccggagggtgta 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 25772271 - 25772301
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  25772271 ttttgcttatattagtgaccggagggtgtat 25772301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 26141870 - 26141900
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  26141870 tttttgcttatattagtgaccggagggtgta 26141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 27314500 - 27314470
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  27314500 tttttgcttatattagtgaccggagggtgta 27314470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 13311199 - 13311170
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgta 31  Q
    ||||||||||||||||||||||||||||||    
T  13311199 ttttgcttatattagtgaccggagggtgta 13311170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3851388 - 3851356
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||| |||||||||||||    
T  3851388 tttttgcttatattagtgatcggagggtgtata 3851356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10437752 - 10437784
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||| ||||||||||||||||||||    
T  10437752 tttttgcttataatagtgaccggagggtgtata 10437784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12750233 - 12750265
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||| ||||||||||||||||||    
T  12750233 tttttgcttatatttgtgaccggagggtgtata 12750265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 39535508 - 39535472
Alignment:
Q  53 atgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  39535508 atgacctatgagatgtggtcatcagtctacatacata 39535472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 43446884 - 43446852
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||| |||||||||||||||    
T  43446884 tttttgcttatattagtaaccggagggtgtata 43446852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 45275 - 45484
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||||||||| ||||||||||| | || |||||| ||||||||||| |||||||||||||||| |||||   |||||| ||||||||    
T  45275 atattaaagcttgactacggatacatttaagaatagcgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacaagaactatc 45374  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataac 283  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||   |||| |||||||||||||||||| ||     
T  45375 tattgtaaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaagtcatgatgcataagataagtttaacagaaa 45474  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  45475 ctattggcct 45484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 36970250 - 36970040
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||||||| ||||||||| ||| || |||||| ||||||||||| |||||||||||||||  |||||   |||||| |||||||    
T  36970250 catattaaagcttgactacggatacatttaagaacaacgttctttatgataatgtaatctcatgattaagtcacacataatatattattacatgaactat 36970151  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||   ||||||||||||||| ||||||||||    
T  36970150 ctattctagggactttattaacattactataaatataataaagagtatcatatattattcaataataaaagtcatgatacataagataaatttaacataa 36970051  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  36970050 actattggcct 36970040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 22659821 - 22660031
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   ||||||| |||||    
T  22659821 catattaaagctttgactacggatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacaaacta 22659920  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  22659921 tctattctaaggactttattaacatta-tataaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacata 22660019  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  22660020 aactattggcct 22660031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 26240459 - 26240249
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  26240459 catattaaagctttgactacggatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 26240360  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  26240359 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataagtttaacata 26240261  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  26240260 aactattggcct 26240249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 12562098 - 12561888
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  12562098 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 12561999  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  12561998 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataggtttaacata 12561900  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  12561899 aactattggcct 12561888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 21969308 - 21969098
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  21969308 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 21969209  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  21969208 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 21969110  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  21969109 aactattggcct 21969098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 22130936 - 22131146
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  22130936 catattaaagctttgactacggataaatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 22131035  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaagt---gatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| ||||||||||||   ||||||||||||| ||||||||||    
T  22131036 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcacgatacataagataggtttaacata 22131134  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  22131135 aactattggcct 22131146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 27007844 - 27008054
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  27007844 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 27007943  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  27007944 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 27008042  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  27008043 aactattggcct 27008054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 27014987 - 27015197
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  27014987 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 27015086  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  27015087 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 27015185  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  27015186 aactattggcct 27015197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 28498468 - 28498258
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  28498468 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 28498369  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  28498368 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 28498270  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  28498269 aactattggcct 28498258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 86 - 278
Target Start/End: Complemental strand, 6430918 - 6430725
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||| ||| |||||||||||   ||||||||| ||||||||||| ||   ||||||||||| |||||   ||||||||||||||    
T  6430918 catattaaagcttgactacgaatacatttaagaatagtgttatttatgataatgtaatctcat---taagtcacacttaatatattattacacgaactat 6430822  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaat-aataaaag---tgatacataagataagtttaac 278  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||   ||||||||||||||| ||||||    
T  6430821 ctattataaggactttattaacattactataaatataataaagagtgtcatatattatttaataaataaaagttatgatacataagataaatttaac 6430725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 87 - 291
Target Start/End: Original strand, 2963262 - 2963469
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| ||||| ||| ||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  2963262 atattaaagtttgac-acgaatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 2963360  T
Q  187 tattctaaggactttatt-aacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataa 282  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||| ||||||||||    ||||||||||||||||||||||||||    
T  2963361 tattctaaggactttattaaacattactataaatataataaaaagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataa 2963460  T
Q  283 cctaatggc 291  Q
     ||| ||||    
T  2963461 actattggc 2963469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 8371580 - 8371790
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| || | |||||||||||   ||||||| | ||||||||||| |||||||||||||||| |||||   |||||||||| ||    
T  8371580 catattaaagctttgactacagacacatttaagaatagtgttatttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaatta 8371679  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| ||||||||||||| |||||| |||||||||||   |||||||||||||||||||||||||    
T  8371680 tctattctaaggactttattaacatta-tctaaatataataaagagtgtcatacattattcaataataaaagtcatgatacataagataagtttaacata 8371778  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  8371779 aactattggcct 8371790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 45534600 - 45534810
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| |||| ||||||||||| |||| | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  45534600 catattaaagctttgactacagatacatttaagaatagcattctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 45534699  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||  |||||||||    
T  45534700 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagatagatttaacata 45534798  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  45534799 aactattggcct 45534810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 27880815 - 27881025
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  27880815 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatatcattacacgaacta 27880914  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  27880915 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 27881013  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  27881014 aactattggcct 27881025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 28020996 - 28021206
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||  ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  28020996 catattaaagctttgactacggattcatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatatcattacacgaacta 28021095  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||  |||||||||||   |||||||||||||| ||||||||||    
T  28021096 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattatccaataataaaagtcatgatacataagataggtttaacata 28021194  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  28021195 aactattggcct 28021206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 86 - 295
Target Start/End: Complemental strand, 18835326 - 18835117
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||| |||||| |||||||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||   | |||   ||||||    
T  18835326 catattaaagctggactacagatatatttaagaataacgttttttatgttaatgtaatctcatgattaagtcacacttaatat---actactgcaactat 18835230  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||||| ||||||||||||| |  | |||||||||||| | |||||||||||||||||||| |||||   ||||| |||| |||||||||||||||    
T  18835229 ctattctaagaactttattaacattataacaaatataacaaaaattgtcatatattatttaataacaaaagtcatgataaataaaataagtttaacataa 18835130  T
Q  283 cctaatggcctat 295  Q
     ||| | ||||||    
T  18835129 actattcgcctat 18835117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 25611170 - 25610970
Alignment:
Q  86 catattaaagctt-gactacggatatattt-aagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaact 183  Q
    ||||||||||||| ||||||||||| |||| ||||||| | || | || | ||||||||||| |||||||||||||||| |||||   ||||||||||||    
T  25611170 catattaaagctttgactacggatacattttaagaatagcgttctctaagataatgtaatctcatgattaagtcacacttaatatattattacacgaact 25611071  T
Q  184 atctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacat 280  Q
    |||||||||||||||||||||||||| | | ||||||||| || ||||| ||||||||||| |||||||||||   |||||||||||||| ||||| |||    
T  25611070 atctattctaaggactttattaacatta-tctaaatataataaggagtgccatatattattcaataataaaagtcatgatacataagataggtttatcat 25610972  T
Q  281 aa 282  Q
    ||    
T  25610971 aa 25610970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 282
Target Start/End: Original strand, 20539729 - 20539924
Alignment:
Q  89 attaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatcta 188  Q
    |||||||||| |||||  || |||||||||||||| || |||||||||||||||||  |||||||||||||||| ||||| | |||| | ||||||||||    
T  20539729 attaaagctttactacaaatgtatttaagaataacgttctttatgttaatgtaatcacatgattaagtcacacttaatattccatta-atgaactatcta 20539827  T
Q  189 ttctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||| ||||||||||||  | || | || ||||| ||||| ||||||||||||||||||||||||||   |||||||||| | |||||||||||||    
T  20539828 ttctatggactttattaatcttacaacaattataataaagaatgtcatatattatttaataataaaagtcatgatacataacacaagtttaacataa 20539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 21916651 - 21916527
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||| ||    
T  21916651 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaatta 21916552  T
Q  185 tctattctaaggactttattaacat 209  Q
    |||||||||||||||||||||||||    
T  21916551 tctattctaaggactttattaacat 21916527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 18835419 - 18835358
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  18835419 tgtatagacttaatatctcatatctatgacccatgagatgtggtaatcagtctacatacata 18835358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 45534506 - 45534567
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  45534506 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 45534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 8371486 - 8371547
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8371486 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 8371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 12562192 - 12562131
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  12562192 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 12562131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22130842 - 22130903
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22130842 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 22130903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 22659727 - 22659788
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  22659727 tgtatagacttaatatctcatatctatgacccatgagatgcagtcatcagtctacatacata 22659788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27007750 - 27007811
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27007750 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 27007811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27014893 - 27014954
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27014893 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 27014954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27880720 - 27880781
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  27880720 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 27880781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 28020901 - 28020962
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  28020901 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 28020962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 36970334 - 36970274
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacat 88  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  36970334 tgtatagacttaatatctcatatctatgacccatgagatgcggtcatcaatctacatacat 36970274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 21916742 - 21916684
Alignment:
Q  31 atagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  21916742 atagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 21916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 2963169 - 2963230
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  2963169 tgtatagacttaatatctcatatttataacccatgagatacggtcattagtctacatacata 2963230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 21969402 - 21969341
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  21969402 tgtatagacttgatatctcatatctatgatccatgagatgcggtcatcagtctacatacata 21969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 25611264 - 25611203
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  25611264 tgtatagacttgatatctcatatctatgacccatgagatgcagtcatcagtctacatacata 25611203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 26240553 - 26240492
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  26240553 tgtatatacttaatatctcatatctatgacccatgagatgcggtcatcagtcttcatacata 26240492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 295
Target Start/End: Original strand, 8782185 - 8782349
Alignment:
Q  132 tgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaagagt 231  Q
    |||||||||||||  |||||||||||||| | ||||| | || |||  ||||||||||| |||||||||||||||  | || | || ||||| ||||| |    
T  8782185 tgttaatgtaatcccatgattaagtcacatttaatattccatcacattaactatctattttaaggactttattaatcttacaacaattataataaagaat 8782284  T
Q  232 gtcatatattatttaataataaa--agtgatacataagataagtttaacataacctaatggcctat 295  Q
    | ||||| ||| |||| ||||||  | |||||||||| ||||||||||||||| ||| || |||||    
T  8782285 gacatatttta-ttaaaaataaagtaatgatacataatataagtttaacataaactattgacctat 8782349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 28498555 - 28498501
Alignment:
Q  35 acttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  28498555 acttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 28498501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 20539630 - 20539691
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  20539630 tgtatacacttaatatctcatattcatgacccatgagatgtgatcatcagtctacatacata 20539691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 8782108 - 8782165
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    |||||||||| ||||||||||||| |||||| || ||| |||||||| ||||||||||    
T  8782108 tgtatagactaaatatctcatatccatgacctataagacgtggtcatcagtctacata 8782165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 21862227 - 21862165
Alignment:
Q  234 catatattatttaataataaaagt---gatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||| ||||||||||||   ||||||||||||| ||||||||||| ||| ||||||    
T  21862227 catatattattcaataataaaagtcatgatacataagataggtttaacataaactattggcct 21862165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 21914390 - 21914328
Alignment:
Q  234 catatattatttaataataaaagt---gatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||| ||||||||||||   ||||||||||||| ||||||||||| ||| ||||||    
T  21914390 catatattattcaataataaaagtcatgatacataagataggtttaacataaactattggcct 21914328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31505153 - 31505185
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  31505153 tttttgcttatattagtgaccggagggtgtata 31505185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40098875 - 40098907
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  40098875 tttttgcttatattagtgaccggagggtgtata 40098907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 31505063 - 31505032
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  31505063 tttttgcttatattagtgaccggagggtgtat 31505032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31810449 - 31810480
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  31810449 tttttgcttatattagtgaccggagggtgtat 31810480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40098785 - 40098754
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  40098785 tttttgcttatattagtgaccggagggtgtat 40098754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1739680 - 1739710
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  1739680 tttttgcttatattagtgaccggagggtgta 1739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1744257 - 1744227
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  1744257 tttttgcttatattagtgaccggagggtgta 1744227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9056136 - 9056166
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  9056136 tttttgcttatattagtgaccggagggtgta 9056166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 14381263 - 14381233
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  14381263 tttttgcttatattagtgaccggagggtgta 14381233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 24053622 - 24053592
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  24053622 tttttgcttatattagtgaccggagggtgta 24053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9056046 - 9056013
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtatag 34  Q
    |||||||||||||| |||||||||||||||||||    
T  9056046 tttttgcttatatttgtgaccggagggtgtatag 9056013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 11856 - 12065
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||| |||||||| |||| |||||||||||   || |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||    
T  11856 atattaaagattgactacagatacatttaagaatagtgttctttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatc 11955  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataac 283  Q
    ||||||||||||||||||||||| |||||||||| || ||||| |||||||||||||| ||||||||||    ||||||||||||||||||||||||||     
T  11956 tattctaaggactttattaacattactataaatacaataaagaatgtcatatattattcaataataaaaatcatgatacataagataagtttaacataaa 12055  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  12056 ctattggcct 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 11763 - 11824
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||    
T  11763 tgtatagacttaatatctcatatctataacccatgagatgcggtcatcaatctacatacata 11824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 40021 - 40220
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||||| || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  40021 catattaaagctttgactacggatacatttaagaataacgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 40120  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  40121 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 40219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 15150 - 15360
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || |||| | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  15150 catattaaagctttgactacggatacatttaagaatagcgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 15249  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  15250 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 15348  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  15349 aactattggcct 15360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15056 - 15117
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  15056 tgtatagacttgatatcttatatctatgacccatgagatgcggtcatcagtctacatacata 15117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 24229542 - 24229741
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||| | ||||||||||||  || |||||| ||| ||||||| |||||||||||||||| |||||   |||||| ||||||    
T  24229542 catattaaagctttgactacggacacatttaagaataatgttctttatgataaagtaatctcatgattaagtcacacttaatatattattacatgaacta 24229641  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  24229642 tctattctaaggactttattaacatta-tttaaatataataaagagtgtcatatattattcaataataaaagtcatgatacataagataagtttaacata 24229740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 30174352 - 30174142
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  30174352 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 30174253  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  30174252 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 30174154  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  30174153 aactattggcct 30174142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 19616412 - 19616212
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    |||||||||||||||||||  ||| |||||||||||   || |||||||||||||||||| |||||||||||||||| |||||   ||||||||||||||    
T  19616412 catattaaagcttgactacaaatacatttaagaatagtgttctttatgttaatgtaatcttatgattaagtcacacttaatatatcattacacgaactat 19616313  T
Q  186 ctattctaaggactttattaacatcactataaata-taacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacata 281  Q
    |||||||| | ||||||||||||| || | ||||| ||  |||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||    
T  19616312 ctattctaggaactttattaacattacaacaaatattataaaagagtgtcatatattatttaataataaaaatcatgatacataatataagtttaacata 19616213  T
Q  282 a 282  Q
    |    
T  19616212 a 19616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 24250359 - 24250569
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| ||||||||||| |||| |||||   |||||||||||||    
T  24250359 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcgcacttaatatattattacacgaacta 24250458  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||| ||||| |||||||||||   |||||||||||||| ||||||||||    
T  24250459 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatattttattcaataataaaagtcatgatacataagataggtttaacata 24250557  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  24250558 aactattggcct 24250569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 24763883 - 24764093
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||| ||| |||  ||||||||||| | || ||||||||||| |||||| ||||||||||||| || ||||| | |||||| |||||||    
T  24763883 catattaaagcttgagtacagatgcatttaagaatatcgttttttatgttaatataatctcatgattaagtcacgcttaatatactattacatgaactat 24763982  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||  ||||||||||||||| |  | |||||||| ||||| |  ||| |||||||||||||||||||   | |||||||| |||||||||||||||    
T  24763983 ctattcttgggactttattaacattataacaaatataataaagatttccatgtattatttaataataaaagtcattatacataacataagtttaacataa 24764082  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  24764083 actattggcct 24764093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 15342330 - 15342539
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||| |||||||||  ||| ||| |||||||   || |||||| ||||||||||| |||||||| ||||||| ||||| | ||||||||||| |||    
T  15342330 atattaaatcttgactacatatacattaaagaatagtgttctttatggtaatgtaatctcatgattaaatcacacttaatattccattacacgaaccatc 15342429  T
Q  187 tattctaaggactttattaa-catcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||| || |||||||||||| ||| || | || ||||| || || ||||||||||||||||| ||||||||   |||||||||| |||||||||||||||    
T  15342430 tattttagggactttattaatcat-acaagaattataataacgaatgtcatatattatttaacaataaaagtcatgatacataatataagtttaacataa 15342528  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  15342529 actattggcct 15342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 277
Target Start/End: Original strand, 28719147 - 28719316
Alignment:
Q  112 tttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatca 211  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||||||||||| ||| | | || ||| ||||||| ||||||||||||||||||||  | |    
T  28719147 tttaagaataatattctttctgttaatgtaatctcatgattaagtcacacttaatgttccatcacatgaactatatattctaaggactttattaatttta 28719246  T
Q  212 ctataaatataa-caaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaa 277  Q
    | |||| |||||  ||||| |||| ||| || ||||||||||||||   |||||||||  ||||||||||    
T  28719247 caataagtataataaaagaatgtcttattttgtttaataataaaagtcatgatacatataataagtttaa 28719316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 24229448 - 24229509
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  24229448 tgtatagacttaatatctcatatctatgaaccatgagatgcggtcatcagtctacatacata 24229509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 24250265 - 24250326
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  24250265 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 24250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 30174446 - 30174385
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  30174446 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 30174385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 29800317 - 29800204
Alignment:
Q  172 attacacgaactatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataaga 268  Q
    |||||||||||||||||||||| ||||||||||||  | || |||| ||||| ||||| || ||||||||||| |||||||||||   |||||| ||  |    
T  29800317 attacacgaactatctattctagggactttattaatcttacaataattataataaagaatgacatatattattcaataataaaagtcatgatacgtagta 29800218  T
Q  269 taagtttaacataa 282  Q
    ||||||||||||||    
T  29800217 taagtttaacataa 29800204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 19616504 - 19616443
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||    
T  19616504 tgtatagacttaatatctaatatttatgactcatgagatgtggtcatcagtctacatacata 19616443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 24763790 - 24763847
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacata 85  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  24763790 tgtatagacgtaatatctcatgtctatgacccatgagacgtggtcatcagtctacata 24763847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 282
Target Start/End: Complemental strand, 21626656 - 21626458
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||  |||||| ||||||  ||||||||||   || |||||||||||||||| | |||||||||||  ||| ||| | | || ||| ||||||||    
T  21626656 atattaaaatttgacttcggatacttttaagaatattgttctttatgttaatgtaatgtcatgattaagtcttacttaatgttccatcacatgaactatc 21626557  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    ||||| | ||||||||||||  | |  | |||||||| ||||| || | ||| ||||| ||||||||| |   |||| ||||  |||||||||||||||    
T  21626556 tattcgagggactttattaatcttataacaaatataataaagaatgccttattttattcaataataaatgtcatgatgcatatcataagtttaacataa 21626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 15342243 - 15342297
Alignment:
Q  35 acttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||| ||||||||||||||  |||||| | ||||||||||||    
T  15342243 acttaatatctcatatcaatgacccatgagattcggtcatcaatctacatacata 15342297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 28741266 - 28741320
Alignment:
Q  35 acttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||  ||||| ||||||||||| |||| ||||||||||||||    
T  28741266 acttaatatctcatattcatgacgcatgagatgtgatcatcagtctacatacata 28741320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5574225 - 5574257
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  5574225 tttttgcttatattagtgaccggagggtgtata 5574257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19612966 - 19612934
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  19612966 tttttgcttatattagtgaccggagggtgtata 19612934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 29800527 - 29800475
Alignment:
Q  37 ttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||    
T  29800527 ttaatatctcacatccatgacccatgggatgtgatcatcagtctacatacata 29800475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38594369 - 38594337
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  38594369 tttttgcttatattagtgaccggagggtgtata 38594337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38597965 - 38597933
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  38597965 tttttgcttatattagtgaccggagggtgtata 38597933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 1981009 - 1980978
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||||||||||||||    
T  1981009 ttttgcttatattagtgaccggagggtgtata 1980978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2060229 - 2060198
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  2060229 tttttgcttatattagtgaccggagggtgtat 2060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2060617 - 2060648
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  2060617 tttttgcttatattagtgaccggagggtgtat 2060648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24457125 - 24457094
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  24457125 tttttgcttatattagtgaccggagggtgtat 24457094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 24457215 - 24457246
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  24457215 tttttgcttatattagtgaccggagggtgtat 24457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26234049 - 26234018
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  26234049 tttttgcttatattagtgaccggagggtgtat 26234018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 37195076 - 37195045
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||||||||||||||    
T  37195076 ttttgcttatattagtgaccggagggtgtata 37195045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 38594459 - 38594490
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  38594459 tttttgcttatattagtgaccggagggtgtat 38594490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 38598055 - 38598086
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  38598055 tttttgcttatattagtgaccggagggtgtat 38598086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3887948 - 3887978
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  3887948 tttttgcttatattagtgaccggagggtgta 3887978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 19950142 - 19950112
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  19950142 tttttgcttatattagtgaccggagggtgta 19950112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5574135 - 5574103
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||| ||||    
T  5574135 tttttgcttatattagtgaccggagggtatata 5574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 12098593 - 12098637
Alignment:
Q  45 tcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||| ||||||||||||||| || |||| ||||||||||||||    
T  12098593 tcatatttatgacccatgagatctgatcatcagtctacatacata 12098637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 20057221 - 20057253
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||| |||||||||||||||||    
T  20057221 tttttgcttatattaatgaccggagggtgtata 20057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34248530 - 34248562
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    ||||||||||||||||||||| |||||||||||    
T  34248530 tttttgcttatattagtgaccagagggtgtata 34248562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 8280 - 8070
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||| ||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  8280 catattaaagctttgactatggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 8181  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  8180 tctattctaaggactttattaacatta-tataaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 8082  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  8081 aactattggcct 8070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 8374 - 8313
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8374 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 8313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 4002 - 4212
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  4002 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 4101  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  4102 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 4200  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  4201 aactattggcct 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 10857 - 11067
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   ||||||| |||||    
T  10857 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacaaacta 10956  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  10957 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 11055  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  11056 aactattggcct 11067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 3908 - 3969
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  3908 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 3969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Complemental strand, 119705 - 119495
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  119705 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 119606  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  119605 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 119507  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  119506 aactattggcct 119495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 119799 - 119738
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  119799 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacgtacata 119738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 130551 - 130761
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  130551 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 130650  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacata 281  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||    
T  130651 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacata 130749  T
Q  282 acctaatggcct 293  Q
    | ||| ||||||    
T  130750 aactattggcct 130761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 138474 - 138649
Alignment:
Q  97 ttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaagg 196  Q
    ||||||||||||| |||||||||||   || |||| | ||||||||||| |||||||||||||||| |||||   ||||||| |||||||||||||||||    
T  138474 ttgactacggatacatttaagaatagtgttctttaagataatgtaatctcatgattaagtcacacttaatatattattacacaaactatctattctaagg 138573  T
Q  197 actttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagata 270  Q
    ||||||||||||| | ||||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||    
T  138574 actttattaacatta-tataaatataataaagagtgacatatattattcaataataaaagtcatgatacataagata 138649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 130457 - 130518
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  130457 tgtatagacttgatatctcatatctatgacccatgagatgcggtcatcagtctacatacata 130518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 13276 - 13486
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatat-gcaattacacgaactat 185  Q
    ||||||||||||||||| ||||| |||||||||||   || |||||||||||||||||| |||||||| ||||||| |||||  || ||||| |||||||    
T  13276 atattaaagcttgactatggatacatttaagaatactgttttttatgttaatgtaatctcatgattaaatcacacttaatatatcatttacatgaactat 13375  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
    |||||||| ||||||||||| ||| |||| ||||||||  ||||| | ||||||||||| |||||||||||   ||||||||||||||| ||||||||||    
T  13376 ctattctagggactttattagcattactacaaatataattaagagagccatatattattcaataataaaagtcatgatacataagataaatttaacataa 13475  T
Q  283 cctaatggcct 293  Q
     ||| ||||||    
T  13476 actattggcct 13486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 13182 - 13243
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  13182 tgtatagacttaatatctcatatatatgacccatgagatgtggtcatcggtctacatacata 13243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 255
Target Start/End: Complemental strand, 26581 - 26413
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||| |||| |||| |||| ||||||||||||| || |||||  ||||||||||| |||||||||||||||| ||||| | |||||||||||||||    
T  26581 atattaaatcttgtctactgatacatttaagaataacgttctttattataatgtaatctcatgattaagtcacacttaatatacgattacacgaactatc 26482  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa 255  Q
    ||||||| ||||||||||||||| || |  ||||||| |||||||| ||||||||||||||||||||||    
T  26481 tattctagggactttattaacattacaacgaatataataaagagtgccatatattatttaataataaaa 26413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 87 - 293
Target Start/End: Original strand, 40315 - 40524
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    ||||||||||||||||| ||||| ||||||||||| | || |||| ||||||||| ||| |||||||||||||||| ||||| | |||||| ||| ||||    
T  40315 atattaaagcttgactatggatacatttaagaatagcgttctttacgttaatgtattctcatgattaagtcacacttaatataccattacatgaattatc 40414  T
Q  187 tattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataac 283  Q
    ||||| |  ||||||||||| || || | |||||||| ||||||||||||||||||||||||||||||||   || ||||||  |||||||||||||||     
T  40415 tattccagagactttattaatattacaaaaaatataataaagagtgtcatatattatttaataataaaagtcatgctacatagcataagtttaacataaa 40514  T
Q  284 ctaatggcct 293  Q
    ||| ||||||    
T  40515 ctattggcct 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 40221 - 40282
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  40221 tgtatagacttaatatctcatatccatgacccatgagatgtggccatcagtctacatacata 40282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 128 - 293
Target Start/End: Complemental strand, 76492 - 76325
Alignment:
Q  128 tttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaa 227  Q
    |||||| ||||||||||| |||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||||| | | ||||||||| |||    
T  76492 tttatgataatgtaatctcatgattaagtcacacttaatatattattacacgaactatctattctaaggactttattaacatta-tctaaatataataaa 76394  T
Q  228 gagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||| ||||| |||| ||||||   |||||||||||||||||||||||||| ||| ||||||    
T  76393 gagtgtcatattttattcaatattaaaagtcatgatacataagataagtttaacataaactattggcct 76325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 86 - 270
Target Start/End: Original strand, 19161 - 19348
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| ||||||||||| ||||||||||| | || | || | ||||||||||| |||||||||||||||| |||||   |||||||||||||    
T  19161 catattaaagctttgactacggatacatttaagaatagcgttctataagataatgtaatctcatgattaagtcacacttaatatattattacacgaacta 19260  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagata 270  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   ||||||||||||||    
T  19261 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagata 19348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 293
Target Start/End: Original strand, 18791 - 18951
Alignment:
Q  135 taatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaaggactttattaacatcactataaatataacaaagagtgtc 234  Q
    ||||||||||| |||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||||| | | ||||||||| |||||||| |    
T  18791 taatgtaatctcatgattaagtcacacttaatatattattacacgaactatctattctaaggactttattaacatta-tctaaatataataaagagtgcc 18889  T
Q  235 atatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcct 293  Q
    |||||||||| |||||||||||   |||||||||||||| ||||||||||| ||| ||||||    
T  18890 atatattattcaataataaaagtcatgatacataagataggtttaacataaactattggcct 18951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2089 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 293
Target Start/End: Original strand, 41 - 255
Alignment:
Q  86 catattaaagctt-gactacggatat----atttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacga 180  Q
    ||||||||||||| ||||||||||||    ||||||||||| | || | || | ||||||||||| ||||||||||| |||| |||||   |||||||||    
T  41 catattaaagctttgactacggatatatatatttaagaatagcgttctataagataatgtaatctcatgattaagtcgcacttaatatattattacacga 140  T
Q  181 actatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaa 277  Q
    ||||||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||| ||||||||| |   |||||||||||||| ||||||    
T  141 actatctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaggtcatgatacataagataggtttaa 239  T
Q  278 cataacctaatggcct 293  Q
    || || ||| ||||||    
T  240 caaaaactattggcct 255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1948 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1948
Description:

Target: scaffold1948; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 952 - 1151
Alignment:
Q  96 cttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaag 195  Q
    ||||| || ||||| ||||||||||||| || |||| | ||||||||||  |||||||||||||||| |||||   |||| |  ||||||||||| ||||    
T  952 cttgagtaaggatacatttaagaataacgttctttaagataatgtaatcacatgattaagtcacacttaatatattattaaaaaaactatctattataag 1051  T
Q  196 gactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataacctaatggcc 292  Q
    |||||||||||||| | | ||||||||| |||||||| ||||||||||| |||||||||||   |||||||||||||| ||||||||||| ||| |||||    
T  1052 gactttattaacatta-tctaaatataataaagagtgccatatattattcaataataaaagtcatgatacataagataggtttaacataaactattggcc 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 293
Target Start/End: Complemental strand, 9028 - 8865
Alignment:
Q  135 taatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatctattctaagg-actttattaacatcactataaatataacaaagagtgt 233  Q
    ||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||||| ||||||||||||| | | ||||||||| ||||||||     
T  9028 taatgtaatctcatgattaagtcacacttaatatattattacacgaactatctattctaaggtactttattaacatta-tctaaatataataaagagtgc 8930  T
Q  234 catatattatt-taataataaaag----tgatacataagataagtttaacataacctaatggcct 293  Q
    ||||||||||| ||||||||||||    ||||||||||||||  |||||||||| ||| ||||||    
T  8929 catatattattctaataataaaagtacatgatacataagatagatttaacataaactattggcct 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9180 - 9118
Alignment:
Q  28 tgtatagacttaatatctcatatctatg-acccatgagatgtggtcattagtctacatacata 89  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  9180 tgtatagacttaatatctcatatctatgtacccatgagatgcggtcatcagtctacatacata 9118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 53741 - 53550
Alignment:
Q  86 catattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactat 185  Q
    ||||||||||||||| |||||||| |||||||||||   || |||||||||||||||||| ||        |||||| |||||   |||||| |||||||    
T  53741 catattaaagcttgaatacggatacatttaagaatagtgttctttatgttaatgtaatctcat--------cacacttaatatatcattacatgaactat 53650  T
Q  186 ctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagtttaacataa 282  Q
     || |||| ||||||||||||||| ||||| |||  || |||||||||||||||||||| |||||||||||   ||||| ||||||||||||||||||||    
T  53649 ttactctagggactttattaacattactatgaatcgaataaagagtgtcatatattattcaataataaaagtcatgatatataagataagtttaacataa 53550  T

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Target: scaffold0086; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 53834 - 53773
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||| | ||||||||||||    
T  53834 tgtatagaattaatacctcatatctatgacccatgagatgcggtcatcaatctacatacata 53773  T

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Target: scaffold0454 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 13861 - 13769
Alignment:
Q  193 aaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaa---gtgatacataagataagtttaacataa 282  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||||    
T  13861 aaggactttattaacattactataaatataataaagagtgtcatatattattcaataataaaaatcatgatacataagataagtttaacataa 13769  T

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Target: scaffold0112 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 158 - 1
Alignment:
Q  86 catattaaagctt-gactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaacta 184  Q
    ||||||||||||| |||||| |||| ||||||||| | | || | || | ||||||||||| || ||||||||||||| |||||   |||||| ||||||    
T  158 catattaaagctttgactacagatacatttaagaacagcgttctataagataatgtaatctcattattaagtcacacttaatatattattacatgaacta 59  T
Q  185 tctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattat 243  Q
    ||||||||||||||||||||||||| | | ||||||||| |||||||| ||||||||||    
T  58 tctattctaaggactttattaacatta-tctaaatataataaagagtgccatatattat 1  T

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Target: scaffold0112; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 252 - 191
Alignment:
Q  28 tgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  252 tgtatagacttgatatctcatatctatgacccatgagatgtggtcatcagtcgacatacata 191  T

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Target: scaffold0611 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 9657 - 9534
Alignment:
Q  172 attacacgaactatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataaga 268  Q
    |||||||||||||||||||||||||||||||||||||| | | ||||||| | |||||||| || ||||||||  ||||||||||   ||||||||||||    
T  9657 attacacgaactatctattctaaggactttattaacatta-tctaaatattataaagagtgccacatattattccataataaaagtcatgatacataaga 9559  T
Q  269 taagtttaacataacctaatggcct 293  Q
    || ||||||||||| ||| ||||||    
T  9558 taggtttaacataaactattggcct 9534  T

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Target: scaffold0059 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 33927 - 34042
Alignment:
Q  180 aactatctattctaaggactttattaacatcactataaatataacaaagagtgtcatatattatttaataataaaag---tgatacataagataagttta 276  Q
    |||||||||||||||||||||||||||||| | | ||||||||| |||||||| || |||||||| |||||||||||   |||||||||||||| |||||    
T  33927 aactatctattctaaggactttattaacatta-tctaaatataataaagagtgccacatattattcaataataaaagtcatgatacataagataggttta 34025  T
Q  277 acataacctaatggcct 293  Q
    |||||| ||| ||||||    
T  34026 acataaactattggcct 34042  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 83247 - 83309
Alignment:
Q  27 gtgtatagacttaatatctcatatctatgacccatgagatgtggtcattagtctacatacata 89  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||||||||||    
T  83247 gtgtataaacttaatatttcatatttatgacccatgagacgtggtcatcagtctacatacata 83309  T

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Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 8706 - 8588
Alignment:
Q  87 atattaaagcttgactacggatatatttaagaataacattatttatgttaatgtaatctaatgattaagtcacactcaatatgcaattacacgaactatc 186  Q
    |||||||| |||||||||  |||  ||||||||||   || |||||||||||||||||| ||||||||||| |||  ||| | | |||||  |||||||     
T  8706 atattaaaacttgactacaaatacttttaagaatagtgttctttatgttaatgtaatctcatgattaagtctcacataatgt-ccattacttgaactata 8608  T
Q  187 tattctaaggactttattaa 206  Q
    ||||||||||||||||||||    
T  8607 tattctaaggactttattaa 8588  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 8792 - 8736
Alignment:
Q  36 cttaatatctcatatctatgacccatgagatgtggtcattagtctacatacatatta 92  Q
    ||||||||||||||||||||||   ||||| ||| |||| | |||||||||||||||    
T  8792 cttaatatctcatatctatgacatgtgagacgtgatcatcaatctacatacatatta 8736  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 120260 - 120292
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtata 33  Q
    |||||||||||||||||||||||||||||||||    
T  120260 tttttgcttatattagtgaccggagggtgtata 120292  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 120169 - 120139
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  120169 ttttgcttatattagtgaccggagggtgtat 120139  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 61188 - 61157
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtat 32  Q
    ||||||||||||||||||||||||||||||||    
T  61188 tttttgcttatattagtgaccggagggtgtat 61157  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 3975 - 3945
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgta 31  Q
    |||||||||||||||||||||||||||||||    
T  3975 tttttgcttatattagtgaccggagggtgta 3945  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 54413 - 54379
Alignment:
Q  1 tttttgcttatattagtgaccggagggtgtataga 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  54413 tttttgcttatattagtaaccggagggtgtataga 54379  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 17191 - 17161
Alignment:
Q  2 ttttgcttatattagtgaccggagggtgtat 32  Q
    |||||||||||||||||||||||||||||||    
T  17191 ttttgcttatattagtgaccggagggtgtat 17161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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