View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1573_high_13 (Length: 280)
Name: NF1573_high_13
Description: NF1573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1573_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 44795183 - 44795437
Alignment:
| Q |
18 |
aaatcacagccctttcccacaaactccttatcacaattttggttcaaccattcgttttnnnnnnnnnnnnnnnnnnnatcggatctagggtttcattctc |
117 |
Q |
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| T |
44795183 |
aaatcacagccctttcccacaaactccttatcacaattttggttcaaccattcgttttttctcttctcttctcttctatcggatctagggtttcattctc |
44795282 |
T |
|
| Q |
118 |
atagatagagggttagggtttttgaaaacctctccaatgttgtttttacgacactaatgtatcgtattcgtctccttcattctttctccgttgcttttct |
217 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44795283 |
atagagagagggttagggtttttgaaaacctctccaatgttgtttttacgacactaatgtatcgtattcgtctccttcattctttctccgttgcttttct |
44795382 |
T |
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| Q |
218 |
gtactggttttacgtcttttcataagcagctttctctaaatcgcttattcttctc |
272 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44795383 |
gtactggttttacgtcttttcataagcaactttctctaaatcgcttattcttctc |
44795437 |
T |
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