View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1573_high_21 (Length: 207)
Name: NF1573_high_21
Description: NF1573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1573_high_21 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 6530642 - 6530560
Alignment:
| Q |
117 |
aaagaaaaattgcaactgctgaaggaattatataatctacttatctactaaatgagagtaaaataatagaattaaagggagcgctagaaac |
207 |
Q |
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| T |
6530642 |
aaagaaaaattgcaactgctgaaggaattatataatctact--------aaatgagagtaaaataatagaattaaagggagcgctagaaac |
6530560 |
T |
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