View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1573_low_3 (Length: 556)

Name: NF1573_low_3
Description: NF1573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1573_low_3
NF1573_low_3
[»] chr5 (61 HSPs)
chr5 (17-527)||(19579682-19580198)
chr5 (268-359)||(19586416-19586507)
chr5 (397-534)||(21191001-21191141)
chr5 (397-528)||(21576690-21576824)
chr5 (405-517)||(28588627-28588742)
chr5 (446-534)||(6247596-6247687)
chr5 (447-519)||(33178014-33178089)
chr5 (397-528)||(43001780-43001919)
chr5 (397-528)||(43564863-43564995)
chr5 (397-528)||(6770523-6770650)
chr5 (395-497)||(21194066-21194171)
chr5 (470-528)||(14674249-14674307)
chr5 (405-463)||(15382533-15382591)
chr5 (397-463)||(39698600-39698666)
chr5 (397-534)||(4105231-4105373)
chr5 (452-532)||(19552545-19552626)
chr5 (479-532)||(22423842-22423895)
chr5 (397-501)||(30502333-30502440)
chr5 (397-501)||(30542676-30542783)
chr5 (470-534)||(13287420-13287484)
chr5 (470-534)||(22013388-22013452)
chr5 (455-538)||(41995441-41995525)
chr5 (397-519)||(17123037-17123161)
chr5 (397-538)||(26312739-26312883)
chr5 (467-509)||(26609352-26609394)
chr5 (447-534)||(19820391-19820479)
chr5 (470-539)||(21522719-21522788)
chr5 (470-539)||(21533285-21533354)
chr5 (485-534)||(30135287-30135336)
chr5 (400-519)||(31084312-31084439)
chr5 (441-528)||(16203784-16203874)
chr5 (479-534)||(3751960-3752014)
chr5 (492-535)||(6072357-6072400)
chr5 (408-463)||(7677764-7677819)
chr5 (397-456)||(14873577-14873636)
chr5 (470-533)||(15410469-15410532)
chr5 (483-526)||(38816729-38816772)
chr5 (479-530)||(41558713-41558764)
chr5 (474-528)||(7175044-7175098)
chr5 (452-509)||(7677704-7677764)
chr5 (479-529)||(9449448-9449498)
chr5 (397-451)||(16864087-16864141)
chr5 (428-501)||(23012384-23012460)
chr5 (470-528)||(27144443-27144501)
chr5 (397-463)||(30098983-30099049)
chr5 (470-516)||(35017029-35017075)
chr5 (453-534)||(36642763-36642847)
chr5 (479-509)||(38464394-38464424)
chr5 (397-463)||(39268543-39268609)
chr5 (470-532)||(42469197-42469259)
chr5 (419-464)||(11084346-11084391)
chr5 (405-509)||(42893359-42893466)
chr5 (470-534)||(6326318-6326382)
chr5 (490-534)||(15382451-15382495)
chr5 (399-463)||(21522809-21522873)
chr5 (399-463)||(21533375-21533439)
chr5 (399-463)||(21542089-21542153)
chr5 (470-518)||(23220973-23221021)
chr5 (443-534)||(24906292-24906386)
chr5 (397-441)||(35252263-35252307)
chr5 (470-530)||(40000556-40000616)
[»] chr6 (52 HSPs)
chr6 (397-534)||(34595108-34595248)
chr6 (397-538)||(7977775-7977919)
chr6 (443-534)||(853850-853944)
chr6 (397-528)||(17841534-17841668)
chr6 (397-528)||(28152079-28152212)
chr6 (397-532)||(4877918-4878056)
chr6 (397-533)||(9658854-9658994)
chr6 (442-534)||(8776963-8777058)
chr6 (397-521)||(32978844-32978972)
chr6 (397-524)||(7265538-7265668)
chr6 (475-534)||(5000652-5000711)
chr6 (397-534)||(6898226-6898366)
chr6 (405-534)||(16833282-16833414)
chr6 (446-534)||(426508-426599)
chr6 (405-532)||(3398595-3398729)
chr6 (446-538)||(5732504-5732599)
chr6 (397-501)||(28715302-28715409)
chr6 (397-501)||(32511611-32511718)
chr6 (447-534)||(7938090-7938180)
chr6 (479-538)||(9629353-9629412)
chr6 (452-534)||(10770674-10770759)
chr6 (405-534)||(12696298-12696435)
chr6 (452-534)||(16766671-16766756)
chr6 (397-534)||(17327595-17327740)
chr6 (479-533)||(8365549-8365603)
chr6 (397-463)||(10339059-10339125)
chr6 (397-538)||(13360318-13360461)
chr6 (440-521)||(19040339-19040423)
chr6 (405-534)||(33001242-33001374)
chr6 (440-500)||(31579215-31579276)
chr6 (454-533)||(8805576-8805656)
chr6 (484-532)||(13851712-13851760)
chr6 (470-533)||(7086770-7086833)
chr6 (479-534)||(9027152-9027207)
chr6 (452-534)||(9107370-9107455)
chr6 (452-525)||(7930288-7930364)
chr6 (405-463)||(8714039-8714097)
chr6 (397-463)||(18367895-18367961)
chr6 (397-462)||(5000560-5000625)
chr6 (406-463)||(5970051-5970108)
chr6 (484-533)||(15489767-15489816)
chr6 (484-532)||(13855587-13855635)
chr6 (470-530)||(19044442-19044502)
chr6 (470-530)||(25038092-25038152)
chr6 (414-500)||(403827-403915)
chr6 (470-516)||(25096415-25096461)
chr6 (451-515)||(7801155-7801222)
chr6 (479-528)||(20371140-20371189)
chr6 (470-534)||(6389717-6389781)
chr6 (397-457)||(31384984-31385044)
chr6 (470-538)||(34073368-34073436)
chr6 (452-519)||(34290079-34290147)
[»] chr4 (36 HSPs)
chr4 (397-534)||(35157930-35158070)
chr4 (397-534)||(23292931-23293071)
chr4 (397-530)||(12895219-12895355)
chr4 (395-534)||(49430999-49431142)
chr4 (397-530)||(12797283-12797418)
chr4 (405-534)||(21945477-21945609)
chr4 (405-501)||(28964201-28964300)
chr4 (405-508)||(4157150-4157255)
chr4 (397-519)||(34306749-34306873)
chr4 (397-509)||(2361920-2362035)
chr4 (405-488)||(4157456-4157542)
chr4 (399-501)||(8423665-8423770)
chr4 (470-533)||(27706198-27706261)
chr4 (442-508)||(54580013-54580082)
chr4 (467-533)||(11651152-11651218)
chr4 (479-516)||(24613731-24613768)
chr4 (470-534)||(36635298-36635362)
chr4 (407-462)||(21345488-21345543)
chr4 (405-518)||(16073385-16073500)
chr4 (479-533)||(19482643-19482697)
chr4 (411-528)||(40179595-40179715)
chr4 (471-515)||(5832716-5832760)
chr4 (422-501)||(29205451-29205533)
chr4 (470-534)||(40481611-40481674)
chr4 (470-525)||(4383351-4383405)
chr4 (397-456)||(27706111-27706170)
chr4 (397-452)||(29205527-29205582)
chr4 (397-463)||(53381535-53381602)
chr4 (397-463)||(15724488-15724554)
chr4 (397-463)||(30982812-30982878)
chr4 (397-450)||(715550-715603)
chr4 (397-450)||(752876-752929)
chr4 (397-457)||(3947706-3947766)
chr4 (485-533)||(20633460-20633508)
chr4 (407-463)||(34589658-34589714)
chr4 (482-538)||(40742561-40742617)
[»] chr3 (49 HSPs)
chr3 (397-530)||(55401053-55401189)
chr3 (397-519)||(20503454-20503579)
chr3 (407-528)||(10954932-10955056)
chr3 (405-534)||(28917975-28918109)
chr3 (409-534)||(26492162-26492290)
chr3 (446-538)||(8383227-8383322)
chr3 (442-534)||(10335276-10335371)
chr3 (405-463)||(40993288-40993346)
chr3 (405-501)||(11251985-11252082)
chr3 (404-534)||(7171476-7171608)
chr3 (448-534)||(8587017-8587106)
chr3 (397-498)||(8789493-8789599)
chr3 (492-533)||(14216867-14216908)
chr3 (492-533)||(14222996-14223037)
chr3 (399-532)||(15999957-16000099)
chr3 (470-534)||(2620074-2620138)
chr3 (470-534)||(3164046-3164110)
chr3 (397-516)||(35222930-35223052)
chr3 (442-528)||(10318025-10318113)
chr3 (470-529)||(11493382-11493441)
chr3 (470-537)||(14840312-14840379)
chr3 (397-534)||(24204986-24205126)
chr3 (405-463)||(4987233-4987291)
chr3 (468-522)||(13620783-13620837)
chr3 (397-463)||(15796228-15796294)
chr3 (397-525)||(27505229-27505365)
chr3 (479-534)||(750648-750704)
chr3 (470-530)||(10268507-10268567)
chr3 (411-463)||(24633360-24633412)
chr3 (470-534)||(26508084-26508148)
chr3 (397-453)||(49651721-49651777)
chr3 (479-534)||(9800014-9800069)
chr3 (479-534)||(41961680-41961735)
chr3 (399-457)||(3631738-3631796)
chr3 (470-516)||(34910309-34910355)
chr3 (397-463)||(41961584-41961650)
chr3 (452-508)||(1509539-1509598)
chr3 (479-528)||(3865586-3865635)
chr3 (470-519)||(4987312-4987361)
chr3 (398-463)||(25064966-25065031)
chr3 (397-434)||(34185057-34185094)
chr3 (397-434)||(40052389-40052426)
chr3 (470-526)||(12703989-12704045)
chr3 (470-534)||(14979155-14979219)
chr3 (482-534)||(15796327-15796379)
chr3 (470-534)||(25064883-25064947)
chr3 (479-519)||(26290360-26290400)
chr3 (479-519)||(40052321-40052361)
chr3 (446-501)||(49505148-49505206)
[»] chr1 (61 HSPs)
chr1 (397-526)||(22515832-22515964)
chr1 (397-528)||(38078606-38078740)
chr1 (397-528)||(46348328-46348462)
chr1 (397-524)||(37598816-37598945)
chr1 (405-530)||(1486657-1486790)
chr1 (442-519)||(22881606-22881686)
chr1 (406-525)||(1815240-1815362)
chr1 (397-532)||(42359394-42359532)
chr1 (397-463)||(47989556-47989622)
chr1 (405-509)||(40258886-40258993)
chr1 (395-534)||(5898209-5898351)
chr1 (397-463)||(31694644-31694710)
chr1 (480-534)||(40917725-40917779)
chr1 (397-509)||(51410023-51410139)
chr1 (406-501)||(40181878-40181976)
chr1 (470-533)||(34298411-34298474)
chr1 (397-534)||(5927285-5927425)
chr1 (447-533)||(9103615-9103703)
chr1 (397-534)||(16297226-16297368)
chr1 (470-534)||(398786-398850)
chr1 (470-534)||(2896142-2896206)
chr1 (470-526)||(12443481-12443537)
chr1 (446-533)||(41877464-41877554)
chr1 (470-534)||(48450608-48450672)
chr1 (479-534)||(1262858-1262913)
chr1 (479-534)||(10572619-10572674)
chr1 (397-499)||(18337338-18337443)
chr1 (397-463)||(32461398-32461464)
chr1 (397-463)||(40917808-40917874)
chr1 (404-508)||(18190060-18190167)
chr1 (408-531)||(31015020-31015140)
chr1 (397-434)||(46940753-46940790)
chr1 (444-507)||(14332634-14332700)
chr1 (470-534)||(14359543-14359606)
chr1 (470-534)||(15323137-15323201)
chr1 (470-534)||(15641051-15641115)
chr1 (407-463)||(19637816-19637872)
chr1 (470-534)||(20157371-20157435)
chr1 (440-519)||(36878450-36878532)
chr1 (452-534)||(5376500-5376585)
chr1 (479-534)||(6427324-6427379)
chr1 (473-528)||(18556480-18556535)
chr1 (388-463)||(29163317-29163392)
chr1 (470-501)||(29229468-29229499)
chr1 (397-463)||(5944342-5944408)
chr1 (479-533)||(9709795-9709849)
chr1 (397-463)||(9828103-9828169)
chr1 (397-463)||(25934675-25934741)
chr1 (470-535)||(2850995-2851059)
chr1 (470-519)||(17831552-17831601)
chr1 (440-500)||(21530697-21530760)
chr1 (452-508)||(24577186-24577245)
chr1 (397-434)||(29144325-29144362)
chr1 (397-458)||(33202956-33203017)
chr1 (442-534)||(39130757-39130852)
chr1 (470-518)||(113289-113337)
chr1 (479-519)||(609488-609528)
chr1 (470-534)||(7918232-7918296)
chr1 (473-517)||(32461487-32461531)
chr1 (470-534)||(34257931-34257995)
chr1 (490-534)||(48040503-48040547)
[»] scaffold0053 (1 HSPs)
scaffold0053 (397-534)||(8772-8912)
[»] chr2 (38 HSPs)
chr2 (397-534)||(18840958-18841098)
chr2 (397-508)||(2438664-2438778)
chr2 (452-538)||(20539674-20539763)
chr2 (397-528)||(37558957-37559091)
chr2 (397-530)||(15972851-15972987)
chr2 (397-519)||(38117104-38117229)
chr2 (446-534)||(19536391-19536483)
chr2 (414-502)||(5367198-5367289)
chr2 (405-533)||(20242680-20242811)
chr2 (415-534)||(30404813-30404935)
chr2 (482-533)||(12940968-12941019)
chr2 (405-533)||(14996172-14996308)
chr2 (446-530)||(31018568-31018655)
chr2 (470-538)||(21782839-21782907)
chr2 (470-533)||(21616737-21616800)
chr2 (470-533)||(30335392-30335455)
chr2 (470-533)||(34785003-34785066)
chr2 (452-530)||(36756344-36756425)
chr2 (397-463)||(24009343-24009409)
chr2 (397-467)||(28596513-28596583)
chr2 (397-463)||(35056927-35056993)
chr2 (397-463)||(37419802-37419868)
chr2 (397-458)||(11223798-11223858)
chr2 (470-539)||(15657833-15657902)
chr2 (405-462)||(19942314-19942371)
chr2 (397-462)||(26769571-26769636)
chr2 (405-462)||(27084318-27084375)
chr2 (453-533)||(36409630-36409711)
chr2 (452-527)||(12668423-12668501)
chr2 (480-528)||(31727837-31727885)
chr2 (484-517)||(33498619-33498652)
chr2 (479-519)||(11670744-11670784)
chr2 (405-465)||(12224269-12224329)
chr2 (475-519)||(12464875-12464919)
chr2 (454-521)||(18420436-18420506)
chr2 (470-534)||(23718000-23718064)
chr2 (470-534)||(24105672-24105736)
chr2 (470-502)||(25846747-25846779)
[»] chr8 (61 HSPs)
chr8 (452-538)||(2572056-2572145)
chr8 (405-528)||(36450707-36450833)
chr8 (397-534)||(926733-926873)
chr8 (445-534)||(20873043-20873135)
chr8 (397-525)||(5813575-5813706)
chr8 (400-499)||(40332200-40332302)
chr8 (397-533)||(949210-949348)
chr8 (398-500)||(33405330-33405435)
chr8 (452-525)||(15816129-15816205)
chr8 (397-501)||(3025558-3025665)
chr8 (479-534)||(22651950-22652005)
chr8 (400-463)||(24205756-24205819)
chr8 (479-533)||(3677761-3677815)
chr8 (480-534)||(29510335-29510389)
chr8 (467-533)||(41838141-41838207)
chr8 (479-516)||(29447140-29447177)
chr8 (405-456)||(4673367-4673418)
chr8 (405-519)||(20679348-20679465)
chr8 (479-534)||(27213521-27213576)
chr8 (397-464)||(29510238-29510305)
chr8 (405-519)||(31556986-31557102)
chr8 (397-501)||(37283760-37283862)
chr8 (397-463)||(3951481-3951547)
chr8 (453-534)||(4298887-4298971)
chr8 (397-463)||(22652035-22652101)
chr8 (397-463)||(28819250-28819316)
chr8 (397-463)||(34450966-34451032)
chr8 (400-516)||(14134691-14134810)
chr8 (397-458)||(15816063-15816124)
chr8 (405-508)||(16641922-16642033)
chr8 (397-462)||(29447044-29447109)
chr8 (440-517)||(27101506-27101585)
chr8 (415-463)||(29655930-29655978)
chr8 (400-463)||(126295-126358)
chr8 (445-503)||(4948657-4948718)
chr8 (397-456)||(6065591-6065650)
chr8 (404-463)||(8293873-8293932)
chr8 (479-534)||(13436994-13437049)
chr8 (405-463)||(17751703-17751762)
chr8 (405-463)||(17760690-17760749)
chr8 (397-463)||(27067236-27067300)
chr8 (470-525)||(34897068-34897123)
chr8 (473-527)||(12936515-12936569)
chr8 (447-516)||(13844591-13844663)
chr8 (395-457)||(22197674-22197736)
chr8 (480-530)||(24196628-24196678)
chr8 (446-519)||(24613510-24613585)
chr8 (481-531)||(29776013-29776063)
chr8 (470-516)||(39954300-39954346)
chr8 (443-519)||(4786329-4786408)
chr8 (446-534)||(8343290-8343381)
chr8 (397-509)||(18407718-18407833)
chr8 (485-538)||(24727790-24727843)
chr8 (479-528)||(31236607-31236656)
chr8 (479-532)||(36934646-36934699)
chr8 (482-534)||(4673458-4673510)
chr8 (479-531)||(18170512-18170564)
chr8 (479-531)||(18634080-18634132)
chr8 (470-534)||(22197763-22197827)
chr8 (490-534)||(25192388-25192432)
chr8 (405-500)||(31580080-31580178)
[»] chr7 (47 HSPs)
chr7 (400-538)||(33994182-33994323)
chr7 (405-533)||(26733279-26733410)
chr7 (414-519)||(41020485-41020593)
chr7 (397-533)||(598183-598322)
chr7 (397-501)||(21880159-21880266)
chr7 (397-530)||(5409776-5409917)
chr7 (397-538)||(43027409-43027558)
chr7 (405-533)||(18212986-18213118)
chr7 (405-534)||(24105652-24105784)
chr7 (397-528)||(15680789-15680923)
chr7 (470-533)||(2034416-2034479)
chr7 (397-534)||(13770665-13770810)
chr7 (452-534)||(27945015-27945100)
chr7 (397-511)||(32287408-32287525)
chr7 (397-463)||(24339701-24339767)
chr7 (446-530)||(11061070-11061157)
chr7 (405-534)||(21864780-21864914)
chr7 (470-538)||(2425754-2425822)
chr7 (414-509)||(8234145-8234243)
chr7 (478-534)||(28401117-28401173)
chr7 (479-534)||(11722128-11722183)
chr7 (397-519)||(20549780-20549905)
chr7 (445-534)||(25481876-25481968)
chr7 (405-462)||(3554459-3554516)
chr7 (470-535)||(5235959-5236024)
chr7 (452-519)||(9408334-9408404)
chr7 (470-534)||(15902796-15902860)
chr7 (470-534)||(22868016-22868080)
chr7 (470-534)||(24339616-24339680)
chr7 (446-532)||(3721070-3721158)
chr7 (482-525)||(8046060-8046103)
chr7 (474-532)||(1433430-1433488)
chr7 (472-530)||(10042915-10042973)
chr7 (470-516)||(11831424-11831470)
chr7 (479-533)||(19206025-19206079)
chr7 (482-532)||(21141015-21141065)
chr7 (400-457)||(2334314-2334371)
chr7 (485-538)||(4017830-4017883)
chr7 (397-457)||(32093959-32094020)
chr7 (470-519)||(32308109-32308158)
chr7 (447-507)||(37870894-37870957)
chr7 (479-519)||(927867-927907)
chr7 (397-457)||(9778559-9778619)
chr7 (479-523)||(11665470-11665514)
chr7 (470-534)||(17851405-17851469)
chr7 (479-515)||(35861957-35861993)
chr7 (414-462)||(39138493-39138541)
[»] scaffold0652 (1 HSPs)
scaffold0652 (397-532)||(407-545)
[»] scaffold0306 (1 HSPs)
scaffold0306 (397-528)||(13380-13520)
[»] scaffold0152 (1 HSPs)
scaffold0152 (397-528)||(21807-21947)
[»] scaffold0361 (1 HSPs)
scaffold0361 (397-516)||(14522-14641)
[»] scaffold0050 (1 HSPs)
scaffold0050 (397-516)||(70270-70392)
[»] scaffold0018 (1 HSPs)
scaffold0018 (482-534)||(178852-178904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (397-534)||(241568-241719)
[»] scaffold0722 (1 HSPs)
scaffold0722 (412-525)||(6992-7108)
[»] scaffold0122 (2 HSPs)
scaffold0122 (443-522)||(7996-8077)
scaffold0122 (479-534)||(8640-8695)
[»] scaffold0004 (1 HSPs)
scaffold0004 (397-458)||(92875-92936)
[»] scaffold0223 (1 HSPs)
scaffold0223 (470-534)||(20146-20210)
[»] scaffold0083 (1 HSPs)
scaffold0083 (397-534)||(45475-45616)
[»] scaffold0007 (1 HSPs)
scaffold0007 (479-534)||(225298-225353)
[»] scaffold0103 (1 HSPs)
scaffold0103 (470-528)||(51791-51849)
[»] scaffold0085 (1 HSPs)
scaffold0085 (479-517)||(26384-26422)
[»] scaffold0086 (1 HSPs)
scaffold0086 (398-463)||(2987-3052)
[»] scaffold0246 (1 HSPs)
scaffold0246 (470-534)||(19550-19613)
[»] scaffold0027 (1 HSPs)
scaffold0027 (470-534)||(46656-46720)
[»] scaffold0011 (1 HSPs)
scaffold0011 (453-508)||(17750-17808)
[»] scaffold0008 (1 HSPs)
scaffold0008 (470-538)||(263393-263461)
[»] scaffold0475 (1 HSPs)
scaffold0475 (484-534)||(3290-3340)
[»] scaffold0227 (1 HSPs)
scaffold0227 (470-516)||(7332-7378)
[»] scaffold0136 (1 HSPs)
scaffold0136 (405-463)||(3791-3849)
[»] scaffold0019 (1 HSPs)
scaffold0019 (405-463)||(71784-71842)
[»] scaffold0793 (1 HSPs)
scaffold0793 (397-450)||(4826-4879)
[»] scaffold0697 (1 HSPs)
scaffold0697 (440-500)||(1652-1715)
[»] scaffold0049 (1 HSPs)
scaffold0049 (447-530)||(63750-63837)


Alignment Details
Target: chr5 (Bit Score: 305; Significance: 1e-171; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 17 - 527
Target Start/End: Complemental strand, 19580198 - 19579682
Alignment:
Q  17 ataactaaggtgttttaaattgatcaagagatttagtactagtaatgcatactaactaactatatctatctatctatcaatatgacataaaatattttcc 116  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  19580198 ataattaaggtgttttaaattgatcaagagattcagtactagtaatgcatactaactaactatatctatc--------aatatgacataaaatattttcc 19580107  T
Q  117 acatactttctctccaagaaaccactaaacattacataattgagagagtgatcgatatataacattcaaggattctccgcacaaatcttctatacaaaag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||    
T  19580106 acatactttctctccaagaaaccactaaacattacataattgagagagtgatcgatatataagattcaaggattctccgcacaaatctcctacactaaag 19580007  T
Q  217 cagccatcaaccaagtttcctcctccaacgttgtaa-caacaccacgagtcactcagccgcagccgtaagaatcagaacccaagtcttttgatgaaataa 315  Q
    |||||||||||||||| ||||| |||| ||||| || || |||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  19580006 cagccatcaaccaagtctcctcttccaccgttgcaaccaccaccacaagtctctcagccgcagccgcaagaatcagaacccaattcttttgatgaaataa 19579907  T
Q  316 aagatgctcaactacagtcatggtttcaagaaatatttcctggtcgagattcttcccaacgtccacaactcgaaaccagtaaagcacgtacactcctcgg 415  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||| | || ||||||||||||||||    
T  19579906 aagattctcaac-acagtcatggtttcaagaaatatttcctggtcgagattcttccagacgtccacaactcgattccaatgaaacacgtacactcctcgg 19579808  T
Q  416 attaggcgtgttccggtgttagatatgtgtcgtgtc-----------cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||| ||||||||||| || |||||||||           ||||||||||||||   |||||||||||| |||||||||||||||||||||||    
T  19579807 attaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattag 19579708  T
Q  502 ttgtgtcgacgtgtcagtatccgtgt 527  Q
     ||||||| ||| ||||| |||||||    
T  19579707 ctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 359
Target Start/End: Original strand, 19586416 - 19586507
Alignment:
Q  268 ctcagccgcagccgtaagaatcagaacccaagtcttttgatgaaataaaagatgctcaactacagtcatggtttcaagaaatatttcctggt 359  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||  |||||||||||||||||| ||||||||||||    
T  19586416 ctcagccgcagccgcaagaatcagaacccaagtcatttgatgaaatagaagattctcaagcacagtcatggtttcaagatatatttcctggt 19586507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 21191001 - 21191141
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| |||| ||  || | |||| |||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  21191001 aagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 21191100  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||| | ||||||| ||||||||||||||    
T  21191101 attattagctgtgtcggcatgtcagtgtccgtgtcgtgtcc 21191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 528
Target Start/End: Original strand, 21576690 - 21576824
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| || |||| ||| | ||||||||||||||| ||||||||   ||| |||| ||| |||||||||| ||||    
T  21576690 aagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaa 21576789  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||| | ||| ||||| | ||||||    
T  21576790 attattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 517
Target Start/End: Original strand, 28588627 - 28588742
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||   | ||| |||| ||| ||||||||||||||||||||||     
T  28588627 acactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattac 28588726  T
Q  502 ttgtgtcgacgtgtca 517  Q
      |||||| |||||||    
T  28588727 cggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 6247687 - 6247596
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| | ||| ||||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtcc 6247596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 519
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  447 gtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||||||||||||   ||| |||||||| |||||||||| | |||||||||||||||||| |||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 43001919 - 43001780
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccga-----caccgacactt---attgcactaaatcatgtgatttt 488  Q
    ||||||| |||||||||||||||||||||| | |||||| || | |||||||||||||     |||| ||||||   ||| |||| ||| |||| |||||    
T  43001919 aagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaatttt 43001820  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
     ||||||||||||  |||||||| ||||||| ||||||||    
T  43001819 ttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 43564995 - 43564863
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||| |||||||||||||||| |||| ||  || |  |||||||||||||||||||||||   ||| |||||||| ||||||||||  |||    
T  43564995 aagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaa 43564896  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||  | ||||||| ||||||||| | ||||||    
T  43564895 attat--gatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 6770650 - 6770523
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat-tgcactaaatcatgtgattttctcaaat 495  Q
    ||||||| |||||| ||||||||||||||| || |     || |||||||||||||||||| ||||| ||  | |||| ||| |||||||||||| ||||    
T  6770650 aagcacggacactcttcggattaggcgtgtaccag-----gacatgtgtcgtgtccgacactgacacataagtacactgaattatgtgattttcttaaat 6770556  T
Q  496 tattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||||||||   |||||||| ||||||||    
T  6770555 tattagttgtgtcagtgtgtcagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 21194066 - 21194171
Alignment:
Q  395 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 491  Q
    ||||||||| |||||||||||||||||||||  |||||||  || ||||||||||||| ||||| | ||   | ||| |||| ||| |||||||||||||    
T  21194066 taaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctc 21194165  T
Q  492 aaatta 497  Q
    ||||||    
T  21194166 aaatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 14674307 - 14674249
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  14674307 cactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 15382591 - 15382533
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||||||||| |||||||  || ||||||||||||| ||||||||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 39698666 - 39698600
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||||||||||||||||||||  ||||||  ||||  |||||||||||||||||||||    
T  39698666 aagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 4105373 - 4105231
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgat--tttctc 491  Q
    ||||||| |||||||||||||||||||||| || || | ||| |  | ||| ||| || ||| ||||||   ||| |||| ||| |||||||  ||| ||    
T  4105373 aagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatcttttttc 4105274  T
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  4105273 aaattattagttatgtcggcgtgtcagtatccgtgtcatgtcc 4105231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 452 - 532
Target Start/End: Original strand, 19552545 - 19552626
Alignment:
Q  452 cgacaccgacacttat-tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||| |||||||||| | |||| ||| |||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||    
T  19552545 cgacatcgacacttatatacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 22423842 - 22423895
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||||||||||||||||||||||| |||||   |||||||||||||||||||||    
T  22423842 atgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 30502333 - 30502440
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||| |||| ||||||||| ||| || ||||  || ||||||||||||||||||||||||   | ||| |||| ||| | |||||||||||||    
T  30502333 aagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaa 30502432  T
Q  494 attattag 501  Q
    ||||||||    
T  30502433 attattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 30542676 - 30542783
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||| |||| ||||||||| ||| || ||||  || ||||||||||||||||||||||||   | ||| |||| ||| | |||||||||||||    
T  30542676 aagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaa 30542775  T
Q  494 attattag 501  Q
    ||||||||    
T  30542776 attattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 13287420 - 13287484
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||  ||||||||||||| ||| ||||||||||||||    
T  13287420 cactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtcc 13287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 22013452 - 22013388
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||| |||||  ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  22013452 cactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22013388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 538
Target Start/End: Complemental strand, 41995525 - 41995441
Alignment:
Q  455 caccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||||||||||| || || | ||| |||||||||| || ||||||||||||||||| ||||||||| || ||||||| |||||||    
T  41995525 caccgacacttaattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtg 41995441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 519
Target Start/End: Complemental strand, 17123161 - 17123037
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca---cttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||||||| ||| ||||  || |||| |||||||| |||||||||    | |||| |||  || |||||||||||||||    
T  17123161 aagcacggacactcctcggattaggcgtg-tcccgtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaa 17123063  T
Q  494 attattagttgtgtcgacgtgtcagt 519  Q
    ||||||||  |||| | |||||||||    
T  17123062 attattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 538
Target Start/End: Complemental strand, 26312883 - 26312739
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    |||||| |||||||||||||||||| |||| | ||||| ||| | || |||||||||||||||| ||   | ||| |||| ||| |  ||||||||||||    
T  26312883 aagcacatacactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaa 26312784  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||||| |  || ||| | | ||||| ||| ||||||||||||||    
T  26312783 attatttgcggtatcggcatatcagtgtccatgtcgtgtccagtg 26312739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 467 - 509
Target Start/End: Complemental strand, 26609394 - 26609352
Alignment:
Q  467 ttgcactaaatcatgtgattttctcaaattattagttgtgtcg 509  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  26609394 ttgcactaaatcatgtgattttatcaaattattagtggtgtcg 26609352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 534
Target Start/End: Original strand, 19820391 - 19820479
Alignment:
Q  447 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||||||||   || ||| ||| |||  ||||||||||||||||||  ||||||  |||||||| ||||||||||||||    
T  19820391 gtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtcc 19820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 539
Target Start/End: Complemental strand, 21522788 - 21522719
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtga 539  Q
    |||| ||| |||| ||||| | |||||||||| ||||||| ||||||||| |||||||||||||| ||||    
T  21522788 cactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtga 21522719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 539
Target Start/End: Complemental strand, 21533354 - 21533285
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtga 539  Q
    |||| ||| |||| ||||| | |||||||||| ||||||| ||||||||| |||||||||||||| ||||    
T  21533354 cactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtga 21533285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 534
Target Start/End: Complemental strand, 30135336 - 30135287
Alignment:
Q  485 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| |||||||||||||||||||| |||||| ||||| |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc 30135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 519
Target Start/End: Complemental strand, 31084439 - 31084312
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgattttctc 491  Q
    |||| |||||||||||||||||| ||| || ||||  || | ||||||||||||||||     ||||||||   ||| || | ||| |||||||||| ||    
T  31084439 cacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttc 31084340  T
Q  492 aaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||| ||||||| |||||||||    
T  31084339 aaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 528
Target Start/End: Original strand, 16203784 - 16203874
Alignment:
Q  441 tgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||| |||||||||||||||| |||   | |||||||| ||| |||||||||||||||||||  |||||| | ||| ||| ||||||||    
T  16203784 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 3751960 - 3752014
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||||    
T  3751960 atgtgattttctcaaattattag-tgtgtcgacttgttagtgttcgtgtcgtgtcc 3752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 535
Target Start/End: Original strand, 6072357 - 6072400
Alignment:
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcca 535  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||    
T  6072357 aaattattagttatgtcggcgtgtcagtatccgtatcgtgtcca 6072400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 7677819 - 7677764
Alignment:
Q  408 ctcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||||||||||||||| |||||||  || ||||| |||||| |||||||||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 14873636 - 14873577
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 456  Q
    ||||||| |||||||||||||||||||||| |||||||| || | |||| | ||||||||    
T  14873636 aagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 533
Target Start/End: Original strand, 15410469 - 15410532
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||| |||||| | ||||||| ||||||||||  |||||| ||||||||| |||||||||||||    
T  15410469 cactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 526
Target Start/End: Original strand, 38816729 - 38816772
Alignment:
Q  483 gattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 526  Q
    |||||||||||||||||||  |||||| ||||||||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 38816772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 530
Target Start/End: Original strand, 41558713 - 41558764
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||| ||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  41558713 atgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgt 41558764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 528
Target Start/End: Original strand, 7175044 - 7175098
Alignment:
Q  474 aaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||| ||||||||||||||||||||||   ||||||| |||||||| ||||||||    
T  7175044 aaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 7677764 - 7677704
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcg 509  Q
    ||||||||||||||   |||||||| ||| |||||||||| |||||||||||| |||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 529
Target Start/End: Complemental strand, 9449498 - 9449448
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcg 529  Q
    |||||||||||||||||||||| | |||||| |||| |||| |||||||||    
T  9449498 atgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 16864141 - 16864087
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc 451  Q
    |||||| || ||| ||||||||||||||||||| |||| |||||||| |||||||    
T  16864141 aagcacatatacttctcggattaggcgtgttccagtgtcagatatgtatcgtgtc 16864087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 23012384 - 23012460
Alignment:
Q  428 ccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||| ||| ||||||||||||| ||||||||||   | ||| || ||||| || ||||||||||||||||||||    
T  23012384 ccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 27144501 - 27144443
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||||| |||||||||||||  |||||| ||||||||| || |||||    
T  27144501 cactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 30098983 - 30099049
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||| ||||||||||||||    
T  30098983 aagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacac 30099049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 35017075 - 35017029
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    |||||||| |||||||||||||||||||||||| || ||| ||||||    
T  35017075 cactaaattatgtgattttctcaaattattagtggtttcggcgtgtc 35017029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 534
Target Start/End: Original strand, 36642763 - 36642847
Alignment:
Q  453 gacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||   | |||||||  |||| | ||| |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 36642847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 509
Target Start/End: Original strand, 38464394 - 38464424
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcg 509  Q
    |||||||||||||||||||||||||||||||    
T  38464394 atgtgattttctcaaattattagttgtgtcg 38464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 39268543 - 39268609
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||||||||| || ||||  || |  |||||||||| ||||||||||    
T  39268543 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 532
Target Start/End: Complemental strand, 42469259 - 42469197
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||||||  |||| |||||||||||||||||   |||||| ||||||| ||||||||||||||    
T  42469259 cactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgt 42469197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 11084391 - 11084346
Alignment:
Q  419 aggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacact 464  Q
    |||||||| |||||||| || ||||||||||||| |||||||||||    
T  11084391 aggcgtgtcccggtgttcgacatgtgtcgtgtccaacaccgacact 11084346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 509
Target Start/End: Complemental strand, 42893466 - 42893359
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||  ||||||||||| | |||||  || | |||| ||||| |||||||||||||   ||| ||||  || |||||||||| ||||||||||||    
T  42893466 acactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattag 42893367  T
Q  502 ttgtgtcg 509  Q
     |||||||    
T  42893366 ctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 6326318 - 6326382
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||| |||||||||||||| |||   ||||| ||||||||| ||||||||||||||    
T  6326318 cactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtcc 6326382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 534
Target Start/End: Complemental strand, 15382495 - 15382451
Alignment:
Q  490 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||| ||||||| ||||||| | ||||||||||||||    
T  15382495 tcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 15382451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 21522873 - 21522809
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||| |||||| | ||||||||||||| ||||||   || | ||||||||||||||||||||||    
T  21522873 gcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 21533439 - 21533375
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||| |||||| | ||||||||||||| ||||||   || | ||||||||||||||||||||||    
T  21533439 gcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 21542153 - 21542089
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||| ||| |||| ||||| ||||||| |||||||  || | ||||||||||||||||||||||    
T  21542153 gcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 23221021 - 23220973
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcag 518  Q
    |||||||| |||||||||| ||||||||||||  |||||||| ||||||    
T  23221021 cactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 534
Target Start/End: Original strand, 24906292 - 24906386
Alignment:
Q  443 tgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||||||| ||||||||||   ||| |||| ||| |||| ||||| |||||||||||  ||||| | ||||||||| | ||||||||||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtcc 24906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 441
Target Start/End: Original strand, 35252263 - 35252307
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatat 441  Q
    |||||| || |||||||||||||||||||||| ||||| ||||||    
T  35252263 aagcacatatactcctcggattaggcgtgttcaggtgtcagatat 35252307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 40000556 - 40000616
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||| ||| |||||||||| |||||||||||   |||||||| ||||||| ||||||||||    
T  40000556 cactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 34595248 - 34595108
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||| |||| ||||||| ||| | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  34595248 aagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 34595149  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  34595148 attattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 34595108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 7977775 - 7977919
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||  ||||||||||||| || |||  || || ||| |||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  7977775 aagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaa 7977874  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  7977875 attattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtg 7977919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 443 - 534
Target Start/End: Original strand, 853850 - 853944
Alignment:
Q  443 tgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||| ||||||||||||||||   |||||||| ||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  853850 tgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtcc 853944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 528
Target Start/End: Original strand, 17841534 - 17841668
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||||||||  | ||||  || |  ||||||||||||||||| |||||   ||| |||||||| |||||||||| ||||    
T  17841534 aagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaa 17841633  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  17841634 attattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 28152212 - 28152079
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||| ||| |||||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  28152212 aagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaa 28152114  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| | ||||| ||||||||| ||||||||    
T  28152113 attattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 532
Target Start/End: Complemental strand, 4878056 - 4877918
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttctca 492  Q
    ||||||| |||||||||||||||||||||| || ||||  || ||||||||||||||||||||||||||   |||  ||| ||| |||||| |||| |||    
T  4878056 aagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttca 4877958  T
Q  493 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||||||| |||||||  |||||| ||||||||||||||    
T  4877957 aattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 533
Target Start/End: Complemental strand, 9658994 - 9658854
Alignment:
Q  397 aagcacgtacactcctcgga-ttaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctca 492  Q
    ||||||| |||||||| ||| |||||||||||||||||| ||| | ||||||||||  |||||||||  |||   | |||| ||| |||||||||||| |    
T  9658994 aagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttctta 9658895  T
Q  493 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||  |||||| ||||||||| |||||||||||||    
T  9658894 aattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 442 - 534
Target Start/End: Original strand, 8776963 - 8777058
Alignment:
Q  442 gtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||| ||||||   ||| |||| |||  ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  8776963 gtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 521
Target Start/End: Original strand, 32978844 - 32978972
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtg-attttctca 492  Q
    ||||||| |||||||| ||||||| ||||| |||||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||||  |||| |||    
T  32978844 aagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttca 32978943  T
Q  493 aattattagttgtgtcgacgtgtcagtat 521  Q
    ||||||||| ||||||| |||||| ||||    
T  32978944 aattattagctgtgtcggcgtgtccgtat 32978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 524
Target Start/End: Original strand, 7265538 - 7265668
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| || ||||||||||||||| | |||||||||  || |||| | |||||||||||||||||   | ||| |||| ||| |||||||||||||||    
T  7265538 aagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaa 7265637  T
Q  494 attattagttgtgtcgacgtgtcagtatccg 524  Q
    ||||||||  |||| | ||||||||| ||||    
T  7265638 attattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 5000652 - 5000711
Alignment:
Q  475 aatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||    
T  5000652 aatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtcc 5000711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 6898226 - 6898366
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||| |||||||||||||||| ||||||| || | |  |||||||||||||||||||||   ||| |||| ||| |||| ||||  ||||    
T  6898226 aagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaa 6898325  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||  |||||  ||||||||| ||| | ||||||||    
T  6898326 attattagacgtgtcagcgtgtcagtgtccatatcgtgtcc 6898366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 16833414 - 16833282
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||||| || |||| | |||||  ||   ||||||||||  ||||||||||||   ||| |||| ||  |||||||||| ||||||||||||    
T  16833414 acactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattattag 16833315  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||||| || |||||||||||    
T  16833314 ttgtgtcggcgtgtcagtgtctgtgtcgtgtcc 16833282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 426508 - 426599
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||   ||| || | ||| |||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 426599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 532
Target Start/End: Complemental strand, 3398729 - 3398595
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc-----gacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 496  Q
    ||||||||| |||||| |||||||||||||  || |||||||||||||     |||||||| ||||||   | |||| ||| || ||||||| |||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaatt 3398631  T
Q  497 attagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||| ||||||| ||||||||| ||||||||||||    
T  3398630 attagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 538
Target Start/End: Original strand, 5732504 - 5732599
Alignment:
Q  446 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||||||||||||||||| |||   | |||||||  ||||||||||||||||||||||   |||||| ||||||||| ||| ||||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtg 5732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 28715409 - 28715302
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||||||||| |||| ||||||||||| |||||||   | | ||||||||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  28715409 aagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaa 28715310  T
Q  494 attattag 501  Q
    ||||||||    
T  28715309 attattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 32511611 - 32511718
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||| ||||||||||| |||| ||| ||| || |||||| ||||||||| ||||||   ||| |||| ||| |||||||||||| ||    
T  32511611 aagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaa 32511710  T
Q  494 attattag 501  Q
    ||||||||    
T  32511711 attattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 534
Target Start/End: Complemental strand, 7938180 - 7938090
Alignment:
Q  447 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||| |||||||||||||||   | |||||||| || ||||||| |||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 7938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 538
Target Start/End: Complemental strand, 9629412 - 9629353
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||||||||| |  |||||| ||||||| ||||||||||||||||||||    
T  9629412 atgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtg 9629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 534
Target Start/End: Original strand, 10770674 - 10770759
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||||||||| | ||||||||| ||| ||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtcc 10770759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 12696435 - 12696298
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc-----gacactt---attgcactaaatcatgtgattttctcaaatt 496  Q
    |||||||| |||| ||| |||| ||||||| ||| | ||||||||||||||||      |||||||   ||| |||| ||| |||| ||||| |||||||    
T  12696435 acactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaatt 12696336  T
Q  497 attagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||| ||||||| ||||||||| ||||||||||||||    
T  12696335 attagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 12696298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 534
Target Start/End: Complemental strand, 16766756 - 16766671
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 16766671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 17327595 - 17327740
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacactta---ttgcactaaatcatgtgatttt 488  Q
    ||||||| |||||||||||||||||||||| || |||| ||| | ||||||||||     |||||| ||||| ||   || |||||||| ||||||||||    
T  17327595 aagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgatttt 17327694  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||| | |||||||||||| ||| ||| | ||  ||||||||||    
T  17327695 ctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtcc 17327740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 479 - 533
Target Start/End: Original strand, 8365549 - 8365603
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||| || |||||||||||||||||||| ||||||||| |||||||||||||    
T  8365549 atgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 10339059 - 10339125
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||||||| |||||||||||| || ||||  || ||||||||||||||||||||||||    
T  10339059 aagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 13360318 - 13360461
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||| |||||||||||||||  | ||||  || || ||| ||||| |||||||| || |||   | |||| ||| |||||||||||||||    
T  13360318 aagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaa 13360416  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| |||| ||||||||||||| || | ||| ||||||||||||    
T  13360417 attactagtggtgtcgacgtgtctgtgttcgtatcgtgtccagtg 13360461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 440 - 521
Target Start/End: Complemental strand, 19040423 - 19040339
Alignment:
Q  440 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtat 521  Q
    |||||||||||||||||| ||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| |||||||||||    
T  19040423 atgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 534
Target Start/End: Original strand, 33001242 - 33001374
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||| | ||||||||||| || |||||| ||| | ||||||||||||||||||||||   | ||| || | ||| |||||||||| ||||||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
      |||||| ||||||| |  |||||| ||||||    
T  33001342 cagtgtcggcgtgtcattgaccgtgttgtgtcc 33001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 500
Target Start/End: Original strand, 31579215 - 31579276
Alignment:
Q  440 atgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaattatta 500  Q
    |||||||||||||||||||||||| | ||| |||| ||| ||||||||||||||||||||||    
T  31579215 atgtgtcgtgtccgacaccgacacataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 533
Target Start/End: Original strand, 8805576 - 8805656
Alignment:
Q  454 acaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||| || || |||||||| |||||||||||||||||||||||  ||| ||||||||| || || ||||||||||    
T  8805576 acaccgacacataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 532
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  484 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 7086833 - 7086770
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| |||||||||||||||||||||||  ||| ||||||||| || || ||||||||||    
T  7086833 cactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 9027207 - 9027152
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||||||||||  |||||| ||||||||| ||||||||||||||    
T  9027207 atgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 9027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 534
Target Start/End: Original strand, 9107370 - 9107455
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||   ||| |||| |||  ||||||||| |||||||||||| ||||||| ||||| ||| ||||||||||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtcc 9107455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 525
Target Start/End: Complemental strand, 7930364 - 7930288
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
    ||||||||||||||   ||| |||||||| |||||||||| ||||||||||| |||||||| | ||||||| |||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 8714097 - 8714039
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||| ||||||| ||| |||  || ||||||||||||||||||||||||    
T  8714097 acactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 18367961 - 18367895
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| |||||||||||| |||||||||||    
T  18367961 aagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 5000560 - 5000625
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    ||||||| |||||| ||||||||| ||||| | |||||  ||||||||||||||| ||||||||||    
T  5000560 aagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 5970051 - 5970108
Alignment:
Q  406 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||||||||| ||||||| ||| |||  || ||||||||||||||||||||||||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 15489767 - 15489816
Alignment:
Q  484 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||| |||||    
T  15489767 attttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 532
Target Start/End: Complemental strand, 13855635 - 13855587
Alignment:
Q  484 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||||||||||||||||| ||||||| |||||||| ||| ||||||||    
T  13855635 attttctcaaattattagtagtgtcgatgtgtcagtttccatgtcgtgt 13855587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 530
Target Start/End: Complemental strand, 19044502 - 19044442
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||| ||| ||||||| |||||||||||||||| |||||| ||||||||| ||| ||||||    
T  19044502 cactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 25038092 - 25038152
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||||| |||| |||||||||||||||||   ||||| ||||||||||||| |||||||    
T  25038092 cactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgt 25038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 500
Target Start/End: Original strand, 403827 - 403915
Alignment:
Q  414 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 500  Q
    ||||||||| ||| ||||||| ||| | ||| ||||||||||||||||||||    || |||||||| |||||||||| |||||||||||    
T  403827 ggattaggcctgt-ccggtgtaagacaggtgacgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 25096461 - 25096415
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    ||||| || |||||||||||||||||||||||| |||||| ||||||    
T  25096461 cactagattatgtgattttctcaaattattagtggtgtcgtcgtgtc 25096415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 515
Target Start/End: Original strand, 7801155 - 7801222
Alignment:
Q  451 ccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgt 515  Q
    |||||||||||||||   ||| | || ||| |||||||||| |||||||||||||||||||| |||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 528
Target Start/End: Original strand, 20371140 - 20371189
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||||||||||||||||||  |||||| ||||||| | ||||||||    
T  20371140 atgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 6389781 - 6389717
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| || | |||||||||||||||||   |||||| ||||| ||| ||||||||||||||    
T  6389781 cactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtcc 6389717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 31385044 - 31384984
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||||| |||||||| ||||||||||||| |||||||  || | ||||||||||| ||||    
T  31385044 aagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 34073368 - 34073436
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| ||| ||| |||||||||||||||||||   ||| | | ||||||| ||||||||||||||||||    
T  34073368 cactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtg 34073436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 34290079 - 34290147
Alignment:
Q  452 cgacaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||||| || || |||| ||| |||||||| || ||||||||||||||||||| | |||||||    
T  34290079 cgacaccgacacataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 7e-32; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 35157930 - 35158070
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||| ||||||||| ||||||||||||||| || |||||||||||| |||||||||||||   ||| |||||||| ||||||||||  |||    
T  35157930 aagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaa 35158029  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||| |||| ||||||||| ||||||| ||||||    
T  35158030 attattagttgcgtcggcgtgtcagtgtccgtgttgtgtcc 35158070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 23292931 - 23293071
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| |||||||  || | ||||||||||||||||||||||||   |||  ||| ||| |||||||||| ||||    
T  23292931 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaa 23293030  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||| ||||||| | ||||||||||||||    
T  23293031 attattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 23293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 12895219 - 12895355
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| ||| |||  ||||  |||||||||||||||||||||||   ||| ||| |||| |||||||||| ||||    
T  12895219 aagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaa 12895318  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    ||||||| |||||||| ||||||| | | ||||||||    
T  12895319 attattatttgtgtcggcgtgtcattgttcgtgtcgt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 534
Target Start/End: Complemental strand, 49431142 - 49430999
Alignment:
Q  395 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttct 490  Q
    ||||||| | ||||||||||||| |||||||| |||||||| || | ||||||||||||||||||||||||   ||| |||| ||| |||||| |||| |    
T  49431142 taaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgattttttt 49431043  T
Q  491 caaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||| ||||||| ||||||| | |||| |||||||||    
T  49431042 caaattattagctgtgtcggcgtgtcactgtccgagtcgtgtcc 49430999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 12797283 - 12797418
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||| |||||||||||| | ||| ||||||| ||| |||| |||||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  12797283 aagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaa 12797381  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||||||| || || ||||||||| ||||||||||    
T  12797382 attattagttttgccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 21945609 - 21945477
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||||||||||||||| ||||||  || ||||||| ||||||||||||||||||   ||| |||| ||| |||| ||||| ||||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 21945510  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
     ||||||| | ||||||| || ||||| |||||    
T  21945509 ctgtgtcggcatgtcagtgtctgtgtcatgtcc 21945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 501
Target Start/End: Original strand, 28964201 - 28964300
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||||||||||||| || ||||  ||||||||||||||||||||| |||||||   ||| |||| ||| |||||||||| ||||||||||||    
T  28964201 acactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 405 - 508
Target Start/End: Complemental strand, 4157255 - 4157150
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||| |||||| || |  ||||||  || ||||||||||||||||||||||||||   |||||||||||| |||||||||| ||||||||||||    
T  4157255 acactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattag 4157157  T
Q  502 ttgtgtc 508  Q
    |||||||    
T  4157156 ttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 519
Target Start/End: Original strand, 34306749 - 34306873
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||| ||||| ||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| ||||| || || ||||||| ||||    
T  34306749 aagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt-tcaa 34306847  T
Q  494 attattagttgtgtcgacgtgtcagt 519  Q
    |||||||||||||||| ||| |||||    
T  34306848 attattagttgtgtcggcgtatcagt 34306873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 2361920 - 2362035
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||| || ||||||| ||||  |||||| ||| | | ||||||||||||||||||||||   ||| |||||||| |||| ||||| ||||    
T  2361920 aagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaa 2362019  T
Q  494 attattagttgtgtcg 509  Q
    |||||||| |||||||    
T  2362020 attattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 405 - 488
Target Start/End: Complemental strand, 4157542 - 4157456
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgatttt 488  Q
    |||||||||| ||||||||| |  ||||||  || ||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  4157542 acactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 501
Target Start/End: Original strand, 8423665 - 8423770
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaat 495  Q
    ||||| ||||| ||| |||||||||||| |||||||  || |  |||||||||||||||||||| ||||   | |||| ||| |||||||||||||||||    
T  8423665 gcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaat 8423764  T
Q  496 tattag 501  Q
    ||||||    
T  8423765 tattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 470 - 533
Target Start/End: Original strand, 27706198 - 27706261
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| |||||||||| | ||||||||| |||||||||||||||||| ||| |||||||||    
T  27706198 cactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 508
Target Start/End: Original strand, 54580013 - 54580082
Alignment:
Q  442 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtc 508  Q
    ||||||||||||||||||||||||||   | |||| ||| |||||||||| |||||||||||||||||||    
T  54580013 gtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 533
Target Start/End: Original strand, 11651152 - 11651218
Alignment:
Q  467 ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||| ||| |||||||||| | |||||||||| ||||||||||||||||| ||||| |||||||    
T  11651152 ttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 516
Target Start/End: Original strand, 24613731 - 24613768
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24613731 atgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 36635362 - 36635298
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||||||||||||||||| |||| | ||||||||| |||| |||||||||    
T  36635362 cactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtcc 36635298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 462
Target Start/End: Original strand, 21345488 - 21345543
Alignment:
Q  407 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    |||||||||||||||| ||| |||||||| ||||||| ||||||| ||||||||||    
T  21345488 actcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgaca 21345543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 518
Target Start/End: Complemental strand, 16073500 - 16073385
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||||||||||||||    ||||  || |||| |||||||||||||||||||||   ||| |||| ||| ||| |||||| |||||||||||     
T  16073500 acactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattattac 16073402  T
Q  502 ttgtgtcgacgtgtcag 518  Q
    |||||| | ||||||||    
T  16073401 ttgtgttggcgtgtcag 16073385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 19482697 - 19482643
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||| || |||||||||||||||||||| ||||||||| || ||||||||||    
T  19482697 atgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 528
Target Start/End: Original strand, 40179595 - 40179715
Alignment:
Q  411 ctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgt 507  Q
    ||||||||||||||||   |||||   | |||||||||||||||||||||| |   | ||| |||| ||| |||||||||| ||||| ||||| | ||||    
T  40179595 ctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgt 40179694  T
Q  508 cgacgtgtcagtatccgtgtc 528  Q
    | |||||||||| ||||||||    
T  40179695 caacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 5832716 - 5832760
Alignment:
Q  471 actaaatcatgtgattttctcaaattattagttgtgtcgacgtgt 515  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||    
T  5832716 actaaatcatatgattttctcaaattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 501
Target Start/End: Complemental strand, 29205533 - 29205451
Alignment:
Q  422 cgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||| |||||||  || ||||||||||||| ||||||||||||   ||| |||| ||| |||||||||| ||||||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 40481674 - 40481611
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||||||| || |||||||||||    
T  40481674 cactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 40481611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 4383405 - 4383351
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
    |||| ||| |||||||||| |||||||||||||||| ||||||||||||| |||||    
T  4383405 cactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 27706111 - 27706170
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 456  Q
    ||||||||||| ||||| |||||||||||| ||||| |  |||| |||||||||||||||    
T  27706111 aagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgaca 27706170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 29205582 - 29205527
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc 452  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||||    
T  29205582 aagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 53381535 - 53381602
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 463  Q
    ||||||| ||||||||||||||||| |||| |||||||  |||| | ||| |||||||||||||||||    
T  53381535 aagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 15724488 - 15724554
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||| || |||||||||||||||||||||  |||||  || | |||| |||||||||||||||||    
T  15724488 aagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 30982812 - 30982878
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||| | ||||||||||||| |||||||  || | |||||||||| |||||||||||    
T  30982812 aagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 715550 - 715603
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 450  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  715550 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 752876 - 752929
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 450  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  752876 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 3947706 - 3947766
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||||| ||||||||||||||||| |||| | |||||  || | ||||||||||||||||    
T  3947706 aagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 533
Target Start/End: Complemental strand, 20633508 - 20633460
Alignment:
Q  485 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||| ||||||||||||  |||||||||||||||| ||||| |||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtc 20633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 34589658 - 34589714
Alignment:
Q  407 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||||||   |||||| ||||| || ||||||||||||| |||||    
T  34589658 actcctcggattaggcgtgcctcggtgtcagatacgtatcgtgtccgacactgacac 34589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 538
Target Start/End: Complemental strand, 40742617 - 40742561
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||||||| | |||||| ||| ||| | |||||||||| |||||||    
T  40742617 tgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgtatccagtg 40742561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 397 - 530
Target Start/End: Complemental strand, 55401189 - 55401053
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| |||||||||| ||||    
T  55401189 aagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaa 55401090  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||||||||||||| ||| ||||| ||||||||||    
T  55401089 attattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 397 - 519
Target Start/End: Complemental strand, 20503579 - 20503454
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  20503579 aagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaa 20503480  T
Q  494 attattagttgtgtcgacgtgtcagt 519  Q
    |||||| ||||||||| |||||||||    
T  20503479 attatttgttgtgtcggcgtgtcagt 20503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 407 - 528
Target Start/End: Complemental strand, 10955056 - 10954932
Alignment:
Q  407 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagtt 503  Q
    |||||||||||||||||||| || ||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagtt 10954957  T
Q  504 gtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||| ||||||||| | ||||||    
T  10954956 gtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 28918109 - 28917975
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc--gacaccgacactt---attgcactaaatcatgtgattttctcaaattatt 499  Q
    |||||||| ||||||||||||| || ||||  || | |||||||||||  |||||||||||||   ||| |||| ||| |||||||||| ||||||||||    
T  28918109 acactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 28918010  T
Q  500 agttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    || | ||||| ||||||||| ||||||||||||||    
T  28918009 agctatgtcggcgtgtcagtttccgtgtcgtgtcc 28917975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 534
Target Start/End: Original strand, 26492162 - 26492290
Alignment:
Q  409 tcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgt 505  Q
    |||||||||||| |||||   ||||| ||| ||||||||||||||||||||| ||||   ||| |||| |||  | ||||||| |||||||||||| | |    
T  26492162 tcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctct 26492261  T
Q  506 gtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||||||||| ||||||||||||||    
T  26492262 gtcggcgtgtcagtgtccgtgtcgtgtcc 26492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 538
Target Start/End: Complemental strand, 8383322 - 8383227
Alignment:
Q  446 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||||||||||   | |||| ||| || ||||||||||||||||||||  |||||| ||||||| | ||||||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtg 8383227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 442 - 534
Target Start/End: Original strand, 10335276 - 10335371
Alignment:
Q  442 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||||||||||| |   | |||||||  |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  10335276 gtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 10335371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 40993288 - 40993346
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||    
T  40993288 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 40993346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 501
Target Start/End: Complemental strand, 11252082 - 11251985
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||||||||||||||||| ||   || | |||| ||||| ||||||||||| | ||| |||| ||| |||||||||||||||||||||||    
T  11252082 acactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacataattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 534
Target Start/End: Complemental strand, 7171608 - 7171476
Alignment:
Q  404 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 500  Q
    ||||||||| |||||||||||||  ||||||  || | ||||||||||||||||| ||||||   ||| |||  ||| || ||||||| ||||||||  |    
T  7171608 tacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaattacaa 7171510  T
Q  501 gttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    | ||||||| | ||||||||||||||||||||||    
T  7171509 gctgtgtcggcatgtcagtatccgtgtcgtgtcc 7171476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 534
Target Start/End: Original strand, 8587017 - 8587106
Alignment:
Q  448 tgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||   ||| |||| ||| |||||||||| |||||||| ||| ||||||| ||||||||| |||||||| |||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtcc 8587106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 8789493 - 8789599
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgt--tagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 491  Q
    ||||||| ||||||||||||||||||||||  ||||||   | || |||||||||||||||||||||||   | ||| |||  ||| |||||||||||||    
T  8789493 aagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctc 8789592  T
Q  492 aaattat 498  Q
    |||||||    
T  8789593 aaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 14216908 - 14216867
Alignment:
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14216908 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 14223037 - 14222996
Alignment:
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  14223037 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 532
Target Start/End: Original strand, 15999957 - 16000099
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt------ccgacaccgacacttattg---cactaaatcatgtgattttc 489  Q
    ||||| |||||||| ||||||||||||| |||||||  || | |||||||||      ||||||||||||||| | |   |||| ||| |||| |||||     
T  15999957 gcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgttattttt 16000056  T
Q  490 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    | |||||||||||||||||| ||||||||| || |||||||||    
T  16000057 ttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 2620074 - 2620138
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| ||||||||||||||||| |||||| |||||| ||||||||| |||| |||||||||    
T  2620074 cacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtcc 2620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 3164046 - 3164110
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||| |||||||||||| || | ||||||||||||||    
T  3164046 cactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtcc 3164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 35223052 - 35222930
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||| | |||||| || |||| ||| | ||||| ||||||||||||||||   | ||| || | ||| |||||||||||| ||    
T  35223052 aagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttctaaa 35222953  T
Q  494 attattagttgtgtcgacgtgtc 516  Q
    | | |||||||||||| ||||||    
T  35222952 aatgttagttgtgtcggcgtgtc 35222930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 528
Target Start/End: Original strand, 10318025 - 10318113
Alignment:
Q  442 gtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| |||||||||||||||||   | |||||||  |||||| ||| |||||||||||| ||||||| ||||||||| ||||||||    
T  10318025 gtgtcgtgcccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 529
Target Start/End: Original strand, 11493382 - 11493441
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcg 529  Q
    |||| ||| |||||||||||||| ||||||||| |||||||||||||| | |||||||||    
T  11493382 cactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 537
Target Start/End: Original strand, 14840312 - 14840379
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagt 537  Q
    |||| ||| |||||||||||| ||||||||| | |||| | |||||| ||||||||||||||||||||    
T  14840312 cactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtccagt 14840379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 24204986 - 24205126
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctca 492  Q
    ||||||| |||||||||| ||||||||||| | |||||  || | | ||| ||||||||||| |||||||||   | ||||  || |||| |||||||||    
T  24204986 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttctca 24205084  T
Q  493 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||   |||||| ||||||||| ||||||||||||||    
T  24205085 aattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtcc 24205126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 4987233 - 4987291
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||||||||| |||||||  || | ||||||||||| ||||||||||    
T  4987233 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 522
Target Start/End: Original strand, 13620783 - 13620837
Alignment:
Q  468 tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatc 522  Q
    |||||| ||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  13620783 tgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 15796228 - 15796294
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||| | |||||||||||||||||||||| || | |||| |||||||||||| ||||    
T  15796228 aagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 525
Target Start/End: Complemental strand, 27505365 - 27505229
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacactt---attgcactaaatcatgtgatttt 488  Q
    ||||||| |||||||||||||||||| ||| |||||||  || | ||||||||||     ||||||||||||||   ||| |||| ||| ||||||||||    
T  27505365 aagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttt 27505266  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
       |||||||||| ||||||| | |||| ||||||||    
T  27505265 taaaaattattagctgtgtcggcttgtccgtatccgt 27505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 750648 - 750704
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtc-agtatccgtgtcgtgtcc 534  Q
    ||||||| || |||||||||||||||||||| |||||| ||| ||||||||||||||    
T  750648 atgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtcc 750704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 530
Target Start/End: Original strand, 10268507 - 10268567
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||||| |||||||||| |||||||||||  ||||||| ||||||||| ||| ||||||    
T  10268507 cactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 463
Target Start/End: Original strand, 24633360 - 24633412
Alignment:
Q  411 ctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||    
T  24633360 ctcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacac 24633412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 26508148 - 26508084
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||| ||||||  |||||||||||| || ||||||||    
T  26508148 cactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtcc 26508084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 49651721 - 49651777
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccg 453  Q
    ||||||| ||||| ||||||||||| |||| |||||||  |||||||||||||||||    
T  49651721 aagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 9800069 - 9800014
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||||||||||||||||||  |||||| ||||||||| | ||||||||||||    
T  9800069 atgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 41961680 - 41961735
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||| || ||||||||||||||||| || ||||||||| || |||||||||||    
T  41961680 atgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtcc 41961735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 457
Target Start/End: Complemental strand, 3631796 - 3631738
Alignment:
Q  399 gcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||| |||||||||||| ||||||||| | |||||  || ||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 34910355 - 34910309
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    |||| ||| |||||||||| |||||||||||||||||||| ||||||    
T  34910355 cactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 41961584 - 41961650
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||| |||||||||||||||| || ||||  || | ||||||||||||| ||||||||    
T  41961584 aagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 508
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 508  Q
    ||||||||||||||   ||| |||||||| |||||||||| |||||||||||| ||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 528
Target Start/End: Original strand, 3865586 - 3865635
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    ||||| |||| |||||||||||| ||||||| ||||||||| ||||||||    
T  3865586 atgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 4987312 - 4987361
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||| |||||||||| |||||||||||| ||||||| |||||||||    
T  4987312 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 25065031 - 25064966
Alignment:
Q  398 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||| ||||||||||||| |  ||||| ||||||| ||| | ||||||||||||||||| ||||    
T  25065031 agcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 34185057 - 34185094
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgt 434  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  34185057 aagcacggacactcctcggattaggcgtgtcccggtgt 34185094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 40052426 - 40052389
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgt 434  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  40052426 aagcacgaacactcctcggattaggcgtgtcccggtgt 40052389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 526
Target Start/End: Complemental strand, 12704045 - 12703989
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 526  Q
    |||| ||| ||||| |||||||||||||||||| |||||| ||||||  ||||||||    
T  12704045 cactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 14979219 - 14979155
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||| ||||||| |||| || | ||| ||||||||||    
T  14979219 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtcc 14979155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 534
Target Start/End: Original strand, 15796327 - 15796379
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||| |||||||||||  ||||||| ||||||| | ||||||||||||||    
T  15796327 tgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 15796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 25064947 - 25064883
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||||| |||||| |||||  |||||| ||||||| | || |||||||||||    
T  25064947 cactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 26290400 - 26290360
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||||||||||||||| | |||||| |||||||||    
T  26290400 atgtgattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 40052361 - 40052321
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||| |||||||||||| ||||||| |||||||||    
T  40052361 atgtgattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 49505148 - 49505206
Alignment:
Q  446 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||| ||||| |||   | |||||||| |||||||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 526
Target Start/End: Original strand, 22515832 - 22515964
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||   ||| |||||||| |||||||||| ||||    
T  22515832 aagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaa 22515931  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtg 526  Q
    |||||||| ||||||  |||||| || ||||||    
T  22515932 attattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 397 - 528
Target Start/End: Original strand, 38078606 - 38078740
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| | |||||||||||||||||||| | ||||||  | ||||||||||||||||||||||||||   ||| || | ||| |||||||||| ||||    
T  38078606 aagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaa 38078705  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||||||||||||| | ||||||    
T  38078706 attattagctgtgtcgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 528
Target Start/End: Original strand, 46348328 - 46348462
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||| |||||||| ||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| || ||||||| ||||    
T  46348328 aagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaa 46348427  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  46348428 attattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 524
Target Start/End: Complemental strand, 37598945 - 37598816
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| ||  |||  || | ||||||||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  37598945 aagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaat-ttgtgattttttcaa 37598847  T
Q  494 attattagttgtgtcgacgtgtcagtatccg 524  Q
    |||||||||||||||| ||||||||| ||||    
T  37598846 attattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 405 - 530
Target Start/End: Original strand, 1486657 - 1486790
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacacttat---tgcactaaatcatgtgattttctcaaatt 496  Q
    |||||||||||||||||||||| |||||||  || | ||||||||||||||||     ||||||||||   | |||| ||| |||||||||| |||||||    
T  1486657 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaatt 1486756  T
Q  497 attagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    ||||| ||||||  ||||||||||||||||||||    
T  1486757 attagctgtgtcagcgtgtcagtatccgtgtcgt 1486790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 442 - 519
Target Start/End: Original strand, 22881606 - 22881686
Alignment:
Q  442 gtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    ||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 406 - 525
Target Start/End: Complemental strand, 1815362 - 1815240
Alignment:
Q  406 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagt 502  Q
    |||||||| |||||||||||| |||||||  || |||||||||||| |||||||||||||   ||| |||| ||| |||||||||| | |||| |||| |    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatt 1815263  T
Q  503 tgtgtcgacgtgtcagtatccgt 525  Q
    ||||||| ||||||||| |||||    
T  1815262 tgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 532
Target Start/End: Original strand, 42359394 - 42359532
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| |||||||  || |   ||| ||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  42359394 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 42359493  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||||||| ||||||  ||||||||| ||||||| ||||    
T  42359494 attattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 47989622 - 47989556
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||    
T  47989622 aagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 405 - 509
Target Start/End: Original strand, 40258886 - 40258993
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||||||||||||| | |||||  || | |||||||||| |||||||||||||   ||| |||| ||| |||||||||| |||||||||||     
T  40258886 acactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaa 40258985  T
Q  502 ttgtgtcg 509  Q
    ||||||||    
T  40258986 ttgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 534
Target Start/End: Original strand, 5898209 - 5898351
Alignment:
Q  395 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctc 491  Q
    ||||||||| |||||||||||||||| ||||| |||||||| || | |||||||||| ||||||||| |   | ||| |||| ||| |||||||||| ||    
T  5898209 taaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttc 5898308  T
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    | ||||||||  |||||| ||| ||||| || ||||| |||||    
T  5898309 agattattagcggtgtcggcgtctcagtgtctgtgtcatgtcc 5898351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 31694644 - 31694710
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||||||| ||||||||||||||||||||   |||||||| |||||||||||||||||    
T  31694644 aagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 40917779 - 40917725
Alignment:
Q  480 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtcc 40917725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 51410139 - 51410023
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga-ttttctca 492  Q
    ||||||| | |||||| |||||||||||||  ||||||  |||| ||||||||||||||||||||||||   ||| |||| ||| |||||| |||| |||    
T  51410139 aagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttca 51410040  T
Q  493 aattattagttgtgtcg 509  Q
    ||||||||| |||||||    
T  51410039 aattattagatgtgtcg 51410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 501
Target Start/End: Complemental strand, 40181976 - 40181878
Alignment:
Q  406 cactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||||||||||||| |||||||  || | |||| |||||||||||||| ||   | ||| |||| ||| |||||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 34298474 - 34298411
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||| ||| |||||||||||||||||||||||| ||||||  |||||||| |||||||||||||    
T  34298474 cactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 5927285 - 5927425
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||| |||||||| |||| || |||  || || |||| |||||||||| |||||||   ||| || ||||| || ||||||| ||||    
T  5927285 aagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaa 5927384  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||  ||||   ||||||||| ||||||||||||||    
T  5927385 attattagcagtgttagcgtgtcagtgtccgtgtcgtgtcc 5927425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 533
Target Start/End: Complemental strand, 9103703 - 9103615
Alignment:
Q  447 gtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||||||||||||  |||  ||||||| |||||||||| |||||||||||  ||||||| ||||||||| |||| ||| ||||    
T  9103703 gtgtccgacaccgacacttgtattaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 16297226 - 16297368
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc---gacactt--attgcactaaatcatgtgattttctc 491  Q
    ||||||| |||||||||||||||||||||| | |||||  || |   |||||||||||||||   |||| |   ||| |||| |||  ||||||||| ||    
T  16297226 aagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggacattgtaattacactgaattttgtgattttttc 16297325  T
Q  492 aaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    | |||||| | ||||||||||||||||||||||| ||||||||    
T  16297326 atattatttgctgtgtcgacgtgtcagtatccgtatcgtgtcc 16297368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 398786 - 398850
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| ||||||||||||  |||||| ||||||||| ||||||||||||||    
T  398786 cactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 398850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 2896142 - 2896206
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||||||||||||||||  |||||| ||||||||| ||||||| ||||||    
T  2896142 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtcc 2896206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 526
Target Start/End: Original strand, 12443481 - 12443537
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtg 526  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  12443481 cactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 533
Target Start/End: Original strand, 41877464 - 41877554
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||||||||||||||||   ||| |||||||| |||| ||||||||||||||||||  |||||| |||  |||| || ||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 48450608 - 48450672
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||| ||||| |||||||||||| ||||| | ||||||||| ||||||||||||||    
T  48450608 cactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtcc 48450672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 1262913 - 1262858
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||||| ||||||| |||||| || | ||||||||||||    
T  1262913 atgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtcc 1262858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 10572619 - 10572674
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||||||||||| |||||| ||||||||| | | ||||||||||    
T  10572619 atgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtcc 10572674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 18337443 - 18337338
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||| |||| ||| || ||||  || | |||| |||||||||||||||||||   ||| |||| ||| |||||||||| ||||    
T  18337443 aagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaa 18337344  T
Q  494 attatt 499  Q
    ||||||    
T  18337343 attatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 32461398 - 32461464
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||| || ||||||||||||| || |||| ||| | ||||||||||||||||||||||    
T  32461398 aagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 40917874 - 40917808
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||| |||||||||||||||||| |||||||  || | ||||||||||| ||||||||||    
T  40917874 aagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 508
Target Start/End: Original strand, 18190060 - 18190167
Alignment:
Q  404 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattatta 500  Q
    |||||||||||||||||| |||| |||||||  || | |||| ||||| |||| ||||||||   ||| |||| ||| |||| ||||| |||||||||||    
T  18190060 tacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T
Q  501 gttgtgtc 508  Q
    | ||||||    
T  18190160 ggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 531
Target Start/End: Complemental strand, 31015140 - 31015020
Alignment:
Q  408 ctcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttattgcactaaatcatgtgattttctcaaattattagttgtgt 507  Q
    ||||| ||||||||||||| ||| ||| ||| | ||||||||||||||||    | |||   |||| ||| ||||||||||||||||||||||| |||||    
T  31015140 ctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacacttgtaatta---cactgaattatgtgattttctcaaattattagctgtgt 31015044  T
Q  508 cgacgtgtcagtatccgtgtcgtg 531  Q
     | || ||||||  ||||||||||    
T  31015043 aggcgcgtcagtgcccgtgtcgtg 31015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 46940753 - 46940790
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgt 434  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  46940753 aagcacgaacactcctcggattaggcgtgttccggtgt 46940790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 14332634 - 14332700
Alignment:
Q  444 gtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgt 507  Q
    ||||||||||||||||| || |||   | |||||||| |||||||||||||||||||||||| ||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 14359543 - 14359606
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||||| |||||||||||| ||||||| |||||| || || |||||||||||    
T  14359543 cactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtcc 14359606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 15323201 - 15323137
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||||| |||||||||||  ||| ||||| ||||||| ||| ||||||||||    
T  15323201 cactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtcc 15323137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 15641051 - 15641115
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| |||||||||||||||| ||||||||||  |||||| | ||||||| |||||||| |||||    
T  15641051 cactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtcc 15641115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 463
Target Start/End: Complemental strand, 19637872 - 19637816
Alignment:
Q  407 actcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||||||||||| | || |||||||  ||||||| |||||||||||||||||||    
T  19637872 actcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacac 19637816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 20157371 - 20157435
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||||||| ||||||||  ||||||| ||||||||  |||||||||||||    
T  20157371 cactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtcc 20157435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 519
Target Start/End: Complemental strand, 36878532 - 36878450
Alignment:
Q  440 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||||||| ||||||||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  36878532 atgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 534
Target Start/End: Original strand, 5376500 - 5376585
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||   ||| |||| ||| |||| ||||||| ||||||||||  |||||| ||||| ||| ||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtcc 5376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 6427379 - 6427324
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||||||||||  |||| | ||||||||| |||||| |||||||    
T  6427379 atgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtcc 6427324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 528
Target Start/End: Original strand, 18556480 - 18556535
Alignment:
Q  473 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    ||||| ||||||| || |||||||||||| ||||||| ||||||||| ||||||||    
T  18556480 taaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 463
Target Start/End: Original strand, 29163317 - 29163392
Alignment:
Q  388 aaaccagtaaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||| | ||||||| ||||| ||| |||||| ||||| ||||||| ||  | ||||||||||||||||||||||    
T  29163317 aaaccaatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacac 29163392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 501
Target Start/End: Complemental strand, 29229499 - 29229468
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||||||||||||||||||||||||    
T  29229499 cactaaatcatgtgattttctcaaattattag 29229468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 5944408 - 5944342
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||||||| | |||||||  || |||||| ||||||| || ||||||    
T  5944408 aagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 9709849 - 9709795
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||||||||||||||||  |||| | | ||||||| |||||||||||||    
T  9709849 atgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 9828169 - 9828103
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||| ||||| |||||||  || | |||||||||| ||||| |||||    
T  9828169 aagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 25934741 - 25934675
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||| |||| |||||| | || |||| ||| | ||||||||||||||||||||||    
T  25934741 aagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 535
Target Start/End: Complemental strand, 2851059 - 2850995
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcca 535  Q
    |||| ||| |||| ||||| ||||||||||||  |||| |||||||||||||||||||||| ||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtcgtatcca 2850995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 17831552 - 17831601
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  17831552 cactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 500
Target Start/End: Complemental strand, 21530760 - 21530697
Alignment:
Q  440 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattatta 500  Q
    ||||||||||||||||||||||||||||   |  || |||| || |||||||||||||||||||    
T  21530760 atgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 508
Target Start/End: Original strand, 24577186 - 24577245
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 508  Q
    ||||||||||||||   ||| |||| ||| |||||||||| |||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Original strand, 29144325 - 29144362
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgt 434  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  29144325 aagcacggacactcttcggattaggcgtgttccggtgt 29144362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 33203017 - 33202956
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 458  Q
    |||||| || ||||||||||||||||||||  ||||||  ||||||| ||||||| ||||||    
T  33203017 aagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 534
Target Start/End: Original strand, 39130757 - 39130852
Alignment:
Q  442 gtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| |||||||||||||||||   | ||| |||||||| || | ||||||| ||||||||| | |||||  ||||||| ||||| ||||||||||    
T  39130757 gtgttgtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtcc 39130852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 113337 - 113289
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcag 518  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||||    
T  113337 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 609488 - 609528
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  609488 atgtaattttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 7918232 - 7918296
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| ||||||||||||||||||||||||  ||||  ||||||| | || |||||||||||    
T  7918232 cactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtcc 7918296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 32461487 - 32461531
Alignment:
Q  473 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtca 517  Q
    ||||| |||||||||| ||||||||||||||||| || |||||||    
T  32461487 taaattatgtgattttttcaaattattagttgtgccggcgtgtca 32461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 34257931 - 34257995
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||||| | |||||||||   |||||||||||||| ||||||| || |||||    
T  34257931 cactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgtatcatgtcc 34257995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 534
Target Start/End: Original strand, 48040503 - 48040547
Alignment:
Q  490 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 48040547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 8912 - 8772
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| | ||||||| ||||||||||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| || ||||||| ||||    
T  8912 aagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaa 8813  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  8812 attattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 18840958 - 18841098
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||| |||| |||||||  || |||||||||||| |||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  18840958 aagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaa 18841057  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||  ||||||||| ||| ||||||||||    
T  18841058 attattagttgtgtcagcgtgtcagtgtccatgtcgtgtcc 18841098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 508
Target Start/End: Original strand, 2438664 - 2438778
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||||||||| | ||    
T  2438664 aagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaa 2438763  T
Q  494 attattagttgtgtc 508  Q
    |||||||| ||||||    
T  2438764 attattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 20539674 - 20539763
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||   ||| |||||||| || ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtg 20539763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 37559091 - 37558957
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||| |||||| |||||||  || | |||||  |||||||||||||||||   ||| || | ||| ||||||||||  |||    
T  37559091 aagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaa 37558992  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||| ||||||||| ||||||||    
T  37558991 attattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 530
Target Start/End: Complemental strand, 15972987 - 15972851
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||| || |||||||||| |||| |||| ||  || | ||||||||||||||||||||||||   ||| |||| |||  ||| ||||| ||||    
T  15972987 aagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaa 15972888  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    ||||||| |||||||| ||||||||| ||||||||||    
T  15972887 attattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 519
Target Start/End: Original strand, 38117104 - 38117229
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||| ||||||||||||||||| |||||||  || | |||| |||||||||||| ||||||   ||| |||  ||  |||||||||| ||||    
T  38117104 aagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaa 38117203  T
Q  494 attattagttgtgtcgacgtgtcagt 519  Q
    |||||||| ||||||| |||||||||    
T  38117204 attattagctgtgtcggcgtgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 534
Target Start/End: Original strand, 19536391 - 19536483
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttct-caaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| | ||||||||||||||||||| ||||||| | ||||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 19536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 5367289 - 5367198
Alignment:
Q  414 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagt 502  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||||   | ||| |||| ||| ||||||||| ||||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 20242680 - 20242811
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||| |||||| |||||||| |  |||| ||| | |||| ||||||||||||||||| |||   | |||| ||| |||||||||||| |||  |||||    
T  20242680 acactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattag 20242779  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| ||||||||| ||| |||||||||    
T  20242780 ttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 30404813 - 30404935
Alignment:
Q  415 gattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgac 511  Q
    |||||||| ||| | |||||  || |||||||||||||||| |||||||||   ||| |||| ||| |||||||||| |||||||||||   |||||| |    
T  30404813 gattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggc 30404912  T
Q  512 gtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||| |||||    
T  30404913 gtgtcagtgtccgtgtcatgtcc 30404935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 533
Target Start/End: Original strand, 12940968 - 12941019
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  12940968 tgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 14996172 - 14996308
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtcc-----gacaccgacactt---attgcactaaatcatgtga-ttttctcaaat 495  Q
    |||||||||||||||||||||||||||||| ||| | |||| ||||||     |||||||||||||   ||| |||||||| || ||| |||| ||||||    
T  14996172 acactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaat 14996270  T
Q  496 tattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||| ||||||| | ||||||| |||||||| ||||    
T  14996271 tattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 31018655 - 31018568
Alignment:
Q  446 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||||||||||||||| |||   | ||||||||||||||||||||| ||||||||||  |||| | ||||||||| ||| ||||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgt 31018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 21782839 - 21782907
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| ||| |||||||||||||||||||||||  |||||| ||||||||| |  |||||||||||||||    
T  21782839 cactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtg 21782907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 21616800 - 21616737
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||| || |||||||||||||    
T  21616800 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 30335455 - 30335392
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| |||| ||||| |||||||||||||||||||| ||||  ||| |||||||||||||    
T  30335455 cactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 470 - 533
Target Start/End: Original strand, 34785003 - 34785066
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| |||||||||||| |||  |||||||||||||  |||||||| |||||||||||||    
T  34785003 cactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtc 34785066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 530
Target Start/End: Original strand, 36756344 - 36756425
Alignment:
Q  452 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    ||||||||||||||||   | |||| ||| |||| ||||  |||||||||||||||||||||||||||||| || |||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 24009409 - 24009343
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||||||||||||||||||    
T  24009409 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 467
Target Start/End: Complemental strand, 28596583 - 28596513
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat 467  Q
    ||||||| ||||||||||||||||| |||| |  ||||  || | ||||||||||||||||||||||||||    
T  28596583 aagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttat 28596513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 35056993 - 35056927
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| ||||||||| ||||||||||||| | ||||  || | ||||||||||||||||||||||    
T  35056993 aagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 37419868 - 37419802
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||||||||| |||||||  || | |  |||||||||||||||||||    
T  37419868 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 11223798 - 11223858
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 458  Q
    ||||||| ||||||||| |||||||||||| ||||||| ||| | |||||||||||||||||    
T  11223798 aagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 539
Target Start/End: Complemental strand, 15657902 - 15657833
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtga 539  Q
    |||| ||| ||||||||||  |||||||||||||| |||| ||||| ||| |||||||||||||| ||||    
T  15657902 cactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtga 15657833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 19942371 - 19942314
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    |||||||||||||||||||||| ||||||| ||| |  || |||||||||||||||||    
T  19942371 acactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 26769636 - 26769571
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    ||||||| |||||||||||||||||||||| || ||||  || | ||||||||||||| |||||||    
T  26769636 aagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Complemental strand, 27084375 - 27084318
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    ||||||||| ||||||||||||  ||||||| || | |||||||||||||||||||||    
T  27084375 acactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 533
Target Start/End: Original strand, 36409630 - 36409711
Alignment:
Q  453 gacaccgacactta-ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||||||| || || |||||||| |||||||||| ||||||||| ||  |||||| | ||| |||||||||||||||||    
T  36409630 gacaccgacacataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 12668423 - 12668501
Alignment:
Q  452 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgt 527  Q
    ||||||||||||||||   | |||| ||| |||| ||||| |||||||||||||| ||||| |||||||||||| ||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgt 12668501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 528
Target Start/End: Complemental strand, 31727885 - 31727837
Alignment:
Q  480 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    ||||||||||||||||||||||| |||||  |||||||||||| |||||    
T  31727885 tgtgattttctcaaattattagtagtgtcagcgtgtcagtatctgtgtc 31727837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 517
Target Start/End: Complemental strand, 33498652 - 33498619
Alignment:
Q  484 attttctcaaattattagttgtgtcgacgtgtca 517  Q
    ||||||||||||||||| ||||||||||||||||    
T  33498652 attttctcaaattattacttgtgtcgacgtgtca 33498619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 11670784 - 11670744
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||||| ||||||||||||| | ||||||||||||||    
T  11670784 atgtgattttttcaaattattagtggcgtcgacgtgtcagt 11670744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 465
Target Start/End: Complemental strand, 12224329 - 12224269
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt 465  Q
    |||||||| ||||||||||||| || ||||  || | || |||||||||||||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacactt 12224269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 12464875 - 12464919
Alignment:
Q  475 aatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||||| ||||||||||||||||| | |||||| |||||||||    
T  12464875 aatcatgtcattttctcaaattattattggtgtcggcgtgtcagt 12464919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 521
Target Start/End: Original strand, 18420436 - 18420506
Alignment:
Q  454 acaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtat 521  Q
    ||||||||||||||   |||| | ||| |||||||||||||||||||||||  |||| | |||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 23718064 - 23718000
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||| ||||||||||||||||  ||||||  |||||||| |||||||| |||||    
T  23718064 cactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc 23718000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 24105736 - 24105672
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||| ||||||||||||||||  ||||||  |||||||| |||||||| |||||    
T  24105736 cactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc 24105672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 502
Target Start/End: Complemental strand, 25846779 - 25846747
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagt 502  Q
    |||| ||||||||||||||||||||||||||||    
T  25846779 cactgaatcatgtgattttctcaaattattagt 25846747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 2572056 - 2572145
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||   ||| |||||||| |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtg 2572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 528
Target Start/End: Original strand, 36450707 - 36450833
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||||||||||||||||||||| | |||||  || | | ||||||||||||||| ||||||   ||| |||| |||  ||||||||| ||||||||||||    
T  36450707 acactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattag 36450806  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| ||||||||| ||||||||    
T  36450807 ttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 926733 - 926873
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||| | || ||| |||||||  || | |||||| |||||||||||||||||||   | |||| ||  ||| |||||||||||    
T  926733 aagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaa 926832  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||  |||| | ||||||||| ||||||||||||||    
T  926833 attattaggagtgttggcgtgtcagtgtccgtgtcgtgtcc 926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 445 - 534
Target Start/End: Complemental strand, 20873135 - 20873043
Alignment:
Q  445 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||||  | ||||| ||||||||| ||||||||||||||    
T  20873135 tcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtcc 20873043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 397 - 525
Target Start/End: Complemental strand, 5813706 - 5813575
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||  ||||||||||| |||||||  || | ||||||||||||||||||||||||    || |||||||  |||||| ||| ||||    
T  5813706 aagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaa 5813607  T
Q  494 attattagttgtgtcgacgtgtcagtatccgt 525  Q
    |||||||| ||||||| |||||| || |||||    
T  5813606 attattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 40332302 - 40332200
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaatt 496  Q
    |||| ||||||||||||||||||| || |||||||  || | ||||||||||| ||||||||||||   ||| |||| ||| ||||||||||||||||||    
T  40332302 cacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaatt 40332203  T
Q  497 att 499  Q
    |||    
T  40332202 att 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 533
Target Start/End: Original strand, 949210 - 949348
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaa 494  Q
    ||||||| ||| ||||| ||||||| ||||  ||||||  |||||||||||| |||| ||||||||| |  | |||||| ||| || ||||||| |||||    
T  949210 aagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgacacattaactgcacttaattatttgattttttcaaa 949309  T
Q  495 ttattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||  ||||||||||| |||||||  ||||||||||    
T  949310 ttattaactgtgtcgacgtatcagtatttgtgtcgtgtc 949348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 398 - 500
Target Start/End: Original strand, 33405330 - 33405435
Alignment:
Q  398 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaa 494  Q
    |||||| |||||| | ||||||| ||||| | ||||| ||| ||||||||||||||||||||||||   | ||| |||||||| ||||| ||||||||||    
T  33405330 agcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaa 33405429  T
Q  495 ttatta 500  Q
    ||||||    
T  33405430 ttatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 452 - 525
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  452 cgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
    ||||||||||||||||   | |||||||| |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 3025665 - 3025558
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||||||||| |||||  | |||| ||| | |||||||||||||||| |||||   | ||| |||| ||| |||||||||||||||    
T  3025665 aagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaa 3025566  T
Q  494 attattag 501  Q
    ||||||||    
T  3025565 attattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 22652005 - 22651950
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  22652005 atgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22651950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 24205756 - 24205819
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||| |||||||||||||||||||||||||||||| ||| ||| || |||| ||||||||||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacac 24205819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 3677815 - 3677761
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||    
T  3677815 atgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 29510335 - 29510389
Alignment:
Q  480 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 29510389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 467 - 533
Target Start/End: Original strand, 41838141 - 41838207
Alignment:
Q  467 ttgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||| ||| |||||||||| | |||||||||| ||||||||||||||||| ||||| |||||||    
T  41838141 ttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 479 - 516
Target Start/End: Original strand, 29447140 - 29447177
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29447140 atgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 456
Target Start/End: Original strand, 4673367 - 4673418
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 456  Q
    |||||||| |||||||||||||||||||||  |||||| |||||||||||||    
T  4673367 acactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 519
Target Start/End: Original strand, 20679348 - 20679465
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||| | |||||||| |||||||  || | |||| | ||| |||||||||||||||   | |||| ||  |||||||||||||||||||||||    
T  20679348 acactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T
Q  502 ttgtgtcgacgtgtcagt 519  Q
      |||||||| |||||||    
T  20679448 gggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 27213576 - 27213521
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||| ||||||||||  |||||| |||||| |||||||||||||||||    
T  27213576 atgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtcc 27213521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 29510238 - 29510305
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacact 464  Q
    ||||||| ||||||||||||||||| |||| |||||||  || | | |||||||||||||||||||||    
T  29510238 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacact 29510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 519
Target Start/End: Complemental strand, 31557102 - 31556986
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||| ||| ||||||||||||| | |||||  || |||||||||||| |||||||| ||||   ||| |||| ||| |||||||||| |||||||||||     
T  31557102 acacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaa 31557004  T
Q  502 ttgtgtcgacgtgtcagt 519  Q
     ||||||| |||||||||    
T  31557003 ctgtgtcggcgtgtcagt 31556986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 501
Target Start/End: Original strand, 37283760 - 37283862
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac-ttattgcactaaatcatgtgattttctcaaat 495  Q
    |||||||  ||||||||||||||| ||||| ||||   |||| | ||||||||||| |||||||||| | ||| |||| ||| |||||||||||||| ||    
T  37283760 aagcacgggcactcctcggattagacgtgtcccgg---tagacacgtgtcgtgtcccacaccgacacataattacactgaattatgtgattttctcagat 37283856  T
Q  496 tattag 501  Q
    ||||||    
T  37283857 tattag 37283862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 3951481 - 3951547
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| | |||||| |||||||||||||||| |||| ||| | |||||||||| |||||||||||    
T  3951481 aagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacac 3951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 534
Target Start/End: Original strand, 4298887 - 4298971
Alignment:
Q  453 gacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||   ||| || ||||| |||||||||| |||||||||||  ||||||| ||||| |||||| |||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc 4298971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 22652101 - 22652035
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||| ||||| |||||||  || |  |||||||||||||||||||||    
T  22652101 aagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 28819316 - 28819250
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||| || |||||||||||||| |||||||||||||| ||||  | ||||||| |||||||||||    
T  28819316 aagcacatatactcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacac 28819250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 34450966 - 34451032
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||| |||| |||||||| || |||| ||| | ||||||||||||||||||||||    
T  34450966 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 14134810 - 14134691
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 496  Q
    |||| |||||||||| ||||||||||| | ||||   || | |||||||||  ||||||||||  |||   | |||| ||| ||||||||||||||||||    
T  14134810 cacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaatt 14134711  T
Q  497 attagttgtgtcgacgtgtc 516  Q
    ||||||  ||||||||||||    
T  14134710 attagtattgtcgacgtgtc 14134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 15816063 - 15816124
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 458  Q
    ||||||| ||||| |||||||||||||||| |||||||  |||  |||||||||||||||||    
T  15816063 aagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacacc 15816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 508
Target Start/End: Original strand, 16641922 - 16642033
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacacttat---tgcactaaatcatgtgattttctcaaatt 496  Q
    ||||||||||||||||| |||| ||||||||||| |  |||||||||     |||||||||||| |||     |||||||| |||||  |||||||||||    
T  16641922 acactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaatt 16642021  T
Q  497 attagttgtgtc 508  Q
    ||||||||||||    
T  16642022 attagttgtgtc 16642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 29447044 - 29447109
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    ||||||| |||||||| ||||||||||||| | ||||| ||| |  ||||||||||||||||||||    
T  29447044 aagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 517
Target Start/End: Complemental strand, 27101585 - 27101506
Alignment:
Q  440 atgtgtcgtgtccgacaccgacacttat--tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtca 517  Q
    ||||||| |||||||||| ||||| |||  | |||||||| |||||||||| ||||||||||||  |||||| |||||||    
T  27101585 atgtgtcatgtccgacactgacacctataattcactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 463
Target Start/End: Original strand, 29655930 - 29655978
Alignment:
Q  415 gattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  29655930 gattaggcgtgtttcggtgtcagatatgtgttgtgtccgacactgacac 29655978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 126295 - 126358
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||| |||||||||||||||| ||||| ||||| || || | |||||||||||||||| |||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacac 126358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 4948718 - 4948657
Alignment:
Q  445 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagtt 503  Q
    |||||||||||||||||||||   ||| |||| ||| |||||||||| ||||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 6065591 - 6065650
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgaca 456  Q
    ||||||| |||||||| | |||| ||||||||||||||  || |||||||||||||||||    
T  6065591 aagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 8293932 - 8293873
Alignment:
Q  404 tacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||||| |||| | ||||| ||||||||||| |||  |||||||||||    
T  8293932 tacactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacac 8293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 13436994 - 13437049
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||| |||||||||||| ||||||| ||||||||| ||| |||| |||||    
T  13436994 atgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtcc 13437049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 17751762 - 17751703
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 463  Q
    |||||||||||||||||||||| |||||||  | |||| ||| |||||||||||||||||    
T  17751762 acactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 17760749 - 17760690
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtc-gtgtccgacaccgacac 463  Q
    |||||||||||||||||||||| |||||||  | |||| ||| |||||||||||||||||    
T  17760749 acactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacac 17760690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 27067236 - 27067300
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||| |||||||||||||||| |||  ||||||||| || |  |||||||||||||||||||||    
T  27067236 aagcacggacactcctcggattagacgt--tccggtgttcgacacatgtcgtgtccgacaccgacac 27067300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 34897123 - 34897068
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
    |||| ||| |||||||||||||||||||||||  ||||||||||||| || |||||    
T  34897123 cactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 12936515 - 12936569
Alignment:
Q  473 taaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgt 527  Q
    ||||| |||||||||| |||||||||||    |||||||||||||||||||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgt 12936569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 516
Target Start/End: Original strand, 13844591 - 13844663
Alignment:
Q  447 gtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    ||||||||||||||||| |||   | |||| ||| |||||||||||||||||||||||  |||||| ||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 22197674 - 22197736
Alignment:
Q  395 taaagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||||||| ||||||||| ||||||||||| ||||||||  || | ||||| ||||||||||    
T  22197674 taaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 530
Target Start/End: Original strand, 24196628 - 24196678
Alignment:
Q  480 tgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    ||||||||| |||||||||||||||||||| |||||| || ||||| ||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgt 24196678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 519
Target Start/End: Complemental strand, 24613585 - 24613510
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    ||||||||||||||||||||   ||| |||| ||| |||||||||| |||||||||||| |||||||  ||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagt 24613510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 29776063 - 29776013
Alignment:
Q  481 gtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 531  Q
    |||||||||||||||||||||  |||||||| ||||| | |||||||||||    
T  29776063 gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Original strand, 39954300 - 39954346
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    |||||||| |||||||||||||||||||||||  |||||| ||||||    
T  39954300 cactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 4786329 - 4786408
Alignment:
Q  443 tgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||||| |||||||||||||| |||   | |||| ||| |||||||||||| ||||||||| | |||||| |||||||||    
T  4786329 tgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagt 4786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 534
Target Start/End: Complemental strand, 8343381 - 8343290
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||| |||||| |||||||   ||| |||||||| |||||||||| |||||||||||| | |||||  ||||| || || |||||||||||    
T  8343381 cgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtcc 8343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 18407833 - 18407718
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||  ||||||||||| |  ||||  || |||||||||||||| || ||||||||   ||| |||| ||| |||||||||| |  |    
T  18407833 aagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttga 18407734  T
Q  494 attattagttgtgtcg 509  Q
    |||||||| |||||||    
T  18407733 attattagctgtgtcg 18407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 24727790 - 24727843
Alignment:
Q  485 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| |||||||||||||||||| ||||||||||| |  ||||||||| |||||    
T  24727790 ttttttcaaattattagttgtgttgacgtgtcagtgtatgtgtcgtgttcagtg 24727843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 528
Target Start/End: Original strand, 31236607 - 31236656
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||||||||||||||||||  |||||| |||||| |||||| ||||    
T  31236607 atgtgattttctcaaattattagcagtgtcggcgtgtccgtatccttgtc 31236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 532
Target Start/End: Complemental strand, 36934699 - 36934646
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||||||||| || |||||||||  |||||||||||| ||| ||||||||||||    
T  36934699 atgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 534
Target Start/End: Original strand, 4673458 - 4673510
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||| |||||||||||  ||||||| ||||||||| || |||||||||||    
T  4673458 tgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc 4673510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 18170512 - 18170564
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 531  Q
    |||| ||||| ||||||| ||| |||||||| ||||||||| |||||||||||    
T  18170512 atgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 18634080 - 18634132
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtg 531  Q
    |||| ||||| ||||||| ||| |||||||| ||||||||| |||||||||||    
T  18634080 atgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 22197763 - 22197827
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||| ||| |||||||||||| ||||| | ||||| ||| || |||||||||||    
T  22197763 cactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtcc 22197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 534
Target Start/End: Original strand, 25192388 - 25192432
Alignment:
Q  490 tcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtcc 25192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 500
Target Start/End: Original strand, 31580080 - 31580178
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattatta 500  Q
    |||| |||||||||||| ||||| ||||||   | |||||||| |||||||| ||||||   | ||| |||| ||| |||||||||||| |||||||||    
T  31580080 acacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 538
Target Start/End: Complemental strand, 33994323 - 33994182
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaatt 496  Q
    |||| |||||||| |||||||||||||  ||||||| || |||||||||||| |||||||||||||   |||||||| ||| ||||||  || |||||||    
T  33994323 cacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaatt 33994224  T
Q  497 attagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    | |||||| |||| ||||||||| | ||||||||||| ||||    
T  33994223 agtagttgcgtcggcgtgtcagtgttcgtgtcgtgtcaagtg 33994182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 405 - 533
Target Start/End: Complemental strand, 26733410 - 26733279
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    |||| |||||||||||||||||||| || |  || ||| |||||||||||||||||||| |   |||  ||| ||| |||||||||| ||||||||||||    
T  26733410 acacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattag 26733311  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
      |||||||||||||||| |||||||||||||    
T  26733310 cggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 414 - 519
Target Start/End: Complemental strand, 41020593 - 41020485
Alignment:
Q  414 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcga 510  Q
    ||||||| ||||| ||||||||||||||||||||||| | |||||||| | |||   | |||||||| ||||||||||   |||||||||||||||||||    
T  41020593 ggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcga 41020494  T
Q  511 cgtgtcagt 519  Q
    |||||||||    
T  41020493 cgtgtcagt 41020485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 533
Target Start/End: Complemental strand, 598322 - 598183
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||| |||||||||||||||| |||||||  || | |||||||||| |||||||||||||   ||| || | ||| | |||||||||| ||    
T  598322 aagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaa 598223  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||||  ||||||| |||||||| |||||||| ||||    
T  598222 attattagcggtgtcgatgtgtcagtgtccgtgtcatgtc 598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 501
Target Start/End: Complemental strand, 21880266 - 21880159
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||| |||||||||||||||| | |||||  || ||||||||||||||||||||||||||   ||| |||| ||| |||| ||||||||||    
T  21880266 aagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaa 21880167  T
Q  494 attattag 501  Q
    ||||||||    
T  21880166 attattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 530
Target Start/End: Original strand, 5409776 - 5409917
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgatttt 488  Q
    ||||||| |||||||||||||||||||||| |||||||  || | ||||||||||||||||     ||||||||   |||||||| ||| ||||||||||    
T  5409776 aagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgatttt 5409875  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
     |||||||||||| ||| ||  ||||||||| ||| ||||||    
T  5409876 ttcaaattattagctgtatcagcgtgtcagtgtccatgtcgt 5409917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 43027409 - 43027558
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtc-----cgacaccgacacttat---tgcactaaatcatgtgatttt 488  Q
    ||||||| |||||| ||||||||||||||| |||||||  || | ||||||||||     |||||||||||||| |   | ||||  || ||||||||||    
T  43027409 aagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgatttt 43027508  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
     |||||||||||| || |||| ||||||||| ||||||||||||||||||    
T  43027509 ttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtg 43027558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 405 - 533
Target Start/End: Original strand, 18212986 - 18213118
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---ttattgcactaaatcatgtgattttct-caaattatta 500  Q
    ||||||||||||| |||||||| || |||| ||| | | ||||||||||||||||||||   | ||| |||||||| ||||||||||||  |||  ||||    
T  18212986 acactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaatta 18213085  T
Q  501 gttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    ||||||||| ||| ||||| |||||||||||||    
T  18213086 gttgtgtcggcgtatcagtgtccgtgtcgtgtc 18213118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 24105784 - 24105652
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattag 501  Q
    ||||||||||| |||||||||| |||||||  || |  ||| ||| ||||| |||||||||   ||| |||| |||||||  ||||| ||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattag 24105685  T
Q  502 ttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
     ||||||| ||||||||| ||||||||||||||    
T  24105684 ctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 24105652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 15680923 - 15680789
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||||||| ||||| |||||  ||||||  || | ||||||||||||||||||||||||   ||| |||||||| |||||||||| |  |    
T  15680923 aagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttttta 15680824  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||| | ||||| ||||||||| ||| ||||    
T  15680823 attattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 2034479 - 2034416
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||| || |||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  2034479 cactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 13770810 - 13770665
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac-----cgacactt---attgcactaaatcatgtgatttt 488  Q
    ||||||| |||||| |||||||||||||||||||||||  || | |||| |||||||||||     ||||||||   ||| |||| ||| |||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  489 ctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
     | |||||||||| ||||||| ||| ||||| ||||||||||||||    
T  13770710 tttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 13770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 534
Target Start/End: Complemental strand, 27945100 - 27945015
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||   ||| |||| ||| |||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtcc 27945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 32287408 - 32287525
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactta---ttgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||| |||| |||||||  || |  |||| |||||||||||||||| ||   ||||||| ||| ||||||||||||||     
T  32287408 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcag 32287507  T
Q  494 attattagttgtgtcgac 511  Q
    ||||||||  ||||||||    
T  32287508 attattagcggtgtcgac 32287525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 24339767 - 24339701
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||  ||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  24339767 aagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 446 - 530
Target Start/End: Original strand, 11061070 - 11061157
Alignment:
Q  446 cgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||| |||||||||||||   |||  ||||||| |||||||||| |||||||||||| |||||||  |||||||| ||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 21864914 - 21864780
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtga--ttttctcaaattatt 499  Q
    |||||||||| ||||| ||||| |||||||  || | ||||||||||||||| ||||||||   ||| |||||||| || |||  |||| ||||||||||    
T  21864914 acactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattatt 21864815  T
Q  500 agttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    || ||||||   ||||| || ||||||||||||||    
T  21864814 agctgtgtccgtgtgtccgtgtccgtgtcgtgtcc 21864780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 2425754 - 2425822
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| ||| ||||||||||||||||||||||   ||| || |||||||||||| |||||||||||||||    
T  2425754 cacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtg 2425822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 509
Target Start/End: Complemental strand, 8234243 - 8234145
Alignment:
Q  414 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcg 509  Q
    |||||||||||||  ||||||  || |||||||||||||||||||| |||||   | | |||| ||| |||| ||||| ||||||||||||||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcg 8234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 28401173 - 28401117
Alignment:
Q  478 catgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||||||||||||||||||||| ||||||||||||  ||  |||||||||||||    
T  28401173 catgtgattttctcaaattattagtagtgtcgacgtgttggtgcccgtgtcgtgtcc 28401117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 11722128 - 11722183
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||||||| ||||  |||||| ||||||||| ||||||||||||||    
T  11722128 atgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 11722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 519
Target Start/End: Complemental strand, 20549905 - 20549780
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaa 493  Q
    |||||||  |||||||||||||||||||||  |  |||  || |||||| ||||||||||||||||| |||   | |||| ||| | |||||||||||||    
T  20549905 aagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaa 20549806  T
Q  494 attattagttgtgtcgacgtgtcagt 519  Q
    ||||||||  ||||||  ||||||||    
T  20549805 attattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 534
Target Start/End: Complemental strand, 25481968 - 25481876
Alignment:
Q  445 tcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||||| ||||||   ||| |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||| ||| ||||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtcc 25481876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 3554459 - 3554516
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    |||||| ||| ||||| |||||  | ||||||||||||||||||||||||||||||||    
T  3554459 acactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgaca 3554516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 535
Target Start/End: Complemental strand, 5236024 - 5235959
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcca 535  Q
    |||||||| || | ||||||| ||||||||||  |||||||||||||||| || ||||||||||||    
T  5236024 cactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcca 5235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 9408334 - 9408404
Alignment:
Q  452 cgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    ||||||||||||||   ||| |||||||| |||||||||| ||||||||||| ||||||||  ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagt 9408404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 15902860 - 15902796
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||| |||||||||| ||||||||||| | |||||| | ||||||| || |||||||||||    
T  15902860 cactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtcc 15902796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 22868080 - 22868016
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||||||| ||||||||| |||||| ||||||||| || |||| ||||||    
T  22868080 cactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtcc 22868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 24339680 - 24339616
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||| ||||||||||    
T  24339680 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtcc 24339616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 3721158 - 3721070
Alignment:
Q  446 cgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||||||||||||||||| |||   |  ||||||| |||||||||||||||||||||||   ||||||  ||||||| ||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattag-catgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 525
Target Start/End: Original strand, 8046060 - 8046103
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgt 525  Q
    ||||||||||||||||||||| |||| | |||||||||||||||    
T  8046060 tgattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 532
Target Start/End: Complemental strand, 1433488 - 1433430
Alignment:
Q  474 aaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    |||| ||||||||||||||||||||||   |||||| ||||||| | ||||||||||||    
T  1433488 aaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 530
Target Start/End: Complemental strand, 10042973 - 10042915
Alignment:
Q  472 ctaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgt 530  Q
    |||||| |||||| ||| ||||||||||||| |||||| ||||| ||| ||||||||||    
T  10042973 ctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 11831470 - 11831424
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    |||||||| || ||||||| ||||||||||||||||||||| |||||    
T  11831470 cactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 19206079 - 19206025
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtc 533  Q
    |||||||||||||||||||||||  |||||| |||||  || |||||||||||||    
T  19206079 atgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 532
Target Start/End: Original strand, 21141015 - 21141065
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||||||| ||||||||||| ||||||||||||| |  ||||||||||||    
T  21141015 tgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgt 21141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 2334371 - 2334314
Alignment:
Q  400 cacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    |||| |||||||||||||||| |||||| | ||||  || ||||||||||||||||||    
T  2334371 cacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 4017830 - 4017883
Alignment:
Q  485 ttttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    ||||||||||||||||   |||||| |||||| || ||||||||||||||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtg 4017883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 32093959 - 32094020
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgt-tccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||||| ||||||||||||||||||||||  |||||||  || | ||||||||||||||||    
T  32093959 aagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 32308158 - 32308109
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||| |||||||||||||||||||||||  |||||| |||||||||    
T  32308158 cactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 37870957 - 37870894
Alignment:
Q  447 gtgtccgacaccgacac---ttattgcactaaatcatgtgattttctcaaattattagttgtgt 507  Q
    |||||||||||||||||   | ||| ||| |||||||||||||||||||||| |||||| ||||    
T  37870957 gtgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgt 37870894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 927867 - 927907
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagt 519  Q
    |||| ||||||||||||||||| | ||||||||||||||||    
T  927867 atgtcattttctcaaattattattagtgtcgacgtgtcagt 927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 9778619 - 9778559
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacac 457  Q
    ||||||| |||||||| ||||||||||||| |||||||  || | |||| |||||||||||    
T  9778619 aagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 11665470 - 11665514
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatcc 523  Q
    |||||||||| |||||||||||||||||||  ||||||| |||||    
T  11665470 atgtgattttttcaaattattagttgtgtcagcgtgtcaatatcc 11665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 17851469 - 17851405
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||||| ||||||||||  || |||| ||||| |||||| ||||||||||    
T  17851469 cactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtcc 17851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 35861993 - 35861957
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgt 515  Q
    |||||||||| |||||||||||||||||||| |||||    
T  35861993 atgtgattttttcaaattattagttgtgtcggcgtgt 35861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 39138541 - 39138493
Alignment:
Q  414 ggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgaca 462  Q
    |||| |||||||| || |||||||| |||| ||||||||||||||||||    
T  39138541 ggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgaca 39138493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 532
Target Start/End: Original strand, 407 - 545
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| ||||||||||||||||| |||| |||||||  || | | ||||||||||||||||||||||   ||| |||| |||  ||||||||| ||||    
T  407 aagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaa 506  T
Q  494 attattagttgtgtcgacgtgtcagtatccgtgtcgtgt 532  Q
    ||||||||  |||||| ||| ||||| |||||| |||||    
T  507 attattagcagtgtcggcgtatcagtgtccgtggcgtgt 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 528
Target Start/End: Complemental strand, 13520 - 13380
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---------ttattgcactaaatcatgtgattt 487  Q
    ||||||| |||||||| |||||||| |||| |  |||| |||   ||||||||||||||||||||||         | |||||||| ||| |||||||||    
T  13520 aagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattt 13421  T
Q  488 tctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  13420 tctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 397 - 528
Target Start/End: Original strand, 21807 - 21947
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac---------ttattgcactaaatcatgtgattt 487  Q
    ||||||| |||||||| |||||||| |||| |  |||| |||   ||||||||||||||||||||||         | |||||||| ||| |||||||||    
T  21807 aagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattt 21906  T
Q  488 tctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  21907 tctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 14641 - 14522
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacacttattgcactaaatcatgtgattttctcaaatt 496  Q
    ||||||||||||||||  ||||||||||||  ||||||  || | |||||||||||||||||     | ||| |||| ||| |||||||||| |||||||    
T  14641 aagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccacttgtaattacactgaattatgtgattttttcaaatt 14542  T
Q  497 attagttgtgtcgacgtgtc 516  Q
    ||||||||||||| ||||||    
T  14541 attagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 516
Target Start/End: Complemental strand, 70392 - 70270
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaa 493  Q
    ||||||| |||||| ||||||||||| ||| | |||||  || | ||||||||||||||||||||||||   ||| |||| ||| |||| ||||| ||||    
T  70392 aagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaa 70293  T
Q  494 attattagttgtgtcgacgtgtc 516  Q
    |||||||  ||||||||| ||||    
T  70292 attattaactgtgtcgacatgtc 70270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 482 - 534
Target Start/End: Original strand, 178852 - 178904
Alignment:
Q  482 tgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  178852 tgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 178904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 534
Target Start/End: Complemental strand, 241719 - 241568
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac--------------ttattgcactaaatcatgt 482  Q
    ||||||| ||||| |||||||||||||||| |||||||  || | ||||||||||||||||| ||||              | ||| |||||||| ||||    
T  241719 aagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgt 241620  T
Q  483 gattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||  ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  241619 gatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 241568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 525
Target Start/End: Original strand, 6992 - 7108
Alignment:
Q  412 tcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 508  Q
    ||||||||||||| | ||| | | ||||| |||| |||||||||||| ||||||   |||  ||||||| |||| ||||| |||||||||||| ||||||    
T  6992 tcggattaggcgtatcccgatatcagatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T
Q  509 gacgtgtcagtatccgt 525  Q
    ||||| ||||| |||||    
T  7092 gacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 8077 - 7996
Alignment:
Q  443 tgtcgtgtccgacaccgacactt--attgcactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatc 522  Q
    |||||||||||||||||||||||  ||| ||||  || || ||||||| |||||||||||||||||||| |||||| |||||    
T  8077 tgtcgtgtccgacaccgacactttaattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatc 7996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 8695 - 8640
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||||||||||  ||||||||||  |||||||||||||||| ||| ||||||||||    
T  8695 atgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtcc 8640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 92936 - 92875
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacacc 458  Q
    ||||||| |||||||||||||||||||||| | |||||  || |||||||||||||||||||    
T  92936 aagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 20210 - 20146
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||| | ||||||||||||||    
T  20210 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 20146  T

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Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 534
Target Start/End: Original strand, 45475 - 45616
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacactt---attgcactaaatcatgt-gattttctca 492  Q
    ||||||||||| || | ||||||||| |||  |||||| ||| | ||||||||||||||||||||||||   ||| |||| ||| ||||   |||| | |    
T  45475 aagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtattttttttta 45574  T
Q  493 aattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
     || |||| |||||||||||||||||| ||||||| ||||||    
T  45575 gataattaattgtgtcgacgtgtcagtgtccgtgttgtgtcc 45616  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 225298 - 225353
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  225298 atgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 225353  T

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Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 51849 - 51791
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtc 528  Q
    |||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||||    
T  51849 cactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 517
Target Start/End: Complemental strand, 26422 - 26384
Alignment:
Q  479 atgtgattttctcaaattattagttgtgtcgacgtgtca 517  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26422 atgtgattttctcaaattattagtggtgtcgacgtgtca 26384  T

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Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 463
Target Start/End: Complemental strand, 3052 - 2987
Alignment:
Q  398 agcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||| ||||||||||||||||||||||||||||||   | | |||||||||| || ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

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Target: scaffold0246 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 19613 - 19550
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||||||||| || |||||||||||    
T  19613 cactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 19550  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 534
Target Start/End: Complemental strand, 46720 - 46656
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    |||| ||| |||||||||| |||||||||||  ||||||| ||||||| | ||||||||||||||    
T  46720 cactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 46656  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 508
Target Start/End: Original strand, 17750 - 17808
Alignment:
Q  453 gacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtgtc 508  Q
    |||||||||||||   ||| |||||||| |||||||||| |||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtc 17808  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 538
Target Start/End: Original strand, 263393 - 263461
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtccagtg 538  Q
    |||| ||| ||||| |||||||||||||||||  |||| ||| ||||||| |||||||||| |||||||    
T  263393 cactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtg 263461  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 534
Target Start/End: Complemental strand, 3340 - 3290
Alignment:
Q  484 attttctcaaattattagttgtgtcgacgtgtcagtatccgtgtcgtgtcc 534  Q
    ||||||| ||||| ||||   ||||||||||||||||||||||||||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtcc 3290  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Original strand, 7332 - 7378
Alignment:
Q  470 cactaaatcatgtgattttctcaaattattagttgtgtcgacgtgtc 516  Q
    |||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  7332 cactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 3791 - 3849
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    ||||||||||||||||||||||  || |||  || ||||||||||||||||||| ||||    
T  3791 acactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 71842 - 71784
Alignment:
Q  405 acactcctcggattaggcgtgttccggtgttagatatgtgtcgtgtccgacaccgacac 463  Q
    |||||||||||||||| ||||| |||||||  || | |||| |||||||||||||||||    
T  71842 acactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 4826 - 4879
Alignment:
Q  397 aagcacgtacactcctcggattaggcgtgttccggtgttagatatgtgtcgtgt 450  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||    
T  4826 aagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 500
Target Start/End: Complemental strand, 1715 - 1652
Alignment:
Q  440 atgtgtcgtgtccgacaccgacacttat---tgcactaaatcatgtgattttctcaaattatta 500  Q
    ||||||||||||||||||||||||||||   |  || |||| || |||||||||||||||||||    
T  1715 atgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 63837 - 63750
Alignment:
Q  447 gtgtccgacaccgacactt---attgcactaaatcatgtgattttctcaaattattagttgtg-tcgacgtgtcagtatccgtgtcgt 530  Q
    ||||| |||||||||||||   |||||||| ||| |||| ||||||||||||||||||  ||| | ||||||||| | ||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtcgt 63750  T

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