View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15740_low_3 (Length: 380)
Name: NF15740_low_3
Description: NF15740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15740_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 24 - 373
Target Start/End: Complemental strand, 33928290 - 33927929
Alignment:
| Q |
24 |
gaaggttggatgagatcttcaccaaattcacaaatcaaaggaaattatcaatatggtcatcaagagtttcaaagcattaatgatgatattattgatgata |
123 |
Q |
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| T |
33928290 |
gaaggttggatgagatcttcaccaaattcacaaatcaaaggaaattatcaatatggtcatcaagagtttcaaagcattaatgatgatattattgatgata |
33928191 |
T |
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| Q |
124 |
ataat---gaatttgaaaataatgggaaattattagtgaagtctgcttcagttccagctgatttaaaccttgaaatccatcatcatca---------caa |
211 |
Q |
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| T |
33928190 |
ataataatgactttgaaaataatgggaaattattagtgaagtctgcttcagttccagctgatttaaaccttgaaatccatcatcatcatcatcatcacaa |
33928091 |
T |
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| Q |
212 |
aattaccagcaaaggtgaattattacaagatggtggagtttcacatgatcaagagtttgattctattctttcatttgagaatcttaacaatggtgctgct |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33928090 |
aattaccagcaaaggtgaattattacaagatggtggagtttcacatgatcaagagtttgattctattctttcatttgagaatcttaacaatggtgctgct |
33927991 |
T |
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| Q |
312 |
tgggacaagtcaacttgtgattctatgcctgaaaagtgttcagcttcttcttcttcatctca |
373 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
33927990 |
tgggacaagtcaacttgtgattctatgcctgaaaagtgttcagcttcttcttcttcttctca |
33927929 |
T |
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