View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15741_low_14 (Length: 335)
Name: NF15741_low_14
Description: NF15741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15741_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 25177570 - 25177873
Alignment:
| Q |
18 |
atatagtgctatatatataccaaacgttttacatgcacttatagagtgtagggtacgtgtattatacgattgaaaaagtaatcaacaaacgttaatttga |
117 |
Q |
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| T |
25177570 |
atatagtgctatatatataccaaacgttttacatgcacttatagagtgtagggtacgtgtattatacgcttgaataagtaatcaacaaacgttaatttga |
25177669 |
T |
|
| Q |
118 |
acctaccacccactcgatagttagaaatattaaaggctgaacttgtcaaaaaagatttgctacaaataataaattgaaggtgaatttgatgtttaacaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25177670 |
acctaccacccactcgatagttagaaatattaaaggctgaacttgtcaaaaaagatttgctacaaataataaattgaaggtgaatttgatgtttaacaca |
25177769 |
T |
|
| Q |
218 |
cacgactttacccaactacctacaatttgttaggtcccaaacttttaaaatcttacctagtttatgcctataattctaaccccctttaatgaccataata |
317 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25177770 |
cacgactttactcaactacctacaatttgttaggtcccaaacttttaaaatcttacctagtttatgcctataattctaaccccctttaatgaccataata |
25177869 |
T |
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| Q |
318 |
tagt |
321 |
Q |
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|||| |
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| T |
25177870 |
tagt |
25177873 |
T |
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