View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15744_high_13 (Length: 313)
Name: NF15744_high_13
Description: NF15744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15744_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 30371440 - 30371146
Alignment:
| Q |
1 |
aatagatggagaaaccttcaagctaaaaactccagctaaagcaaacgatgtagttaaacactatcctggtcatgctcttttggattcacaagcagtgaag |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30371440 |
aatagatggagaaactttcaagctaaaaactccagctaaagcaaacgatgtagttaaacactatcctggtcatgctcttttggattcacaagcagtgaag |
30371341 |
T |
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| Q |
101 |
cattttggtcttagggctaaaccacttgaacctcaccaacaactcaaggctaagaaaatctatttcttagttgagctaccaaaagttcagtctcaaccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30371340 |
cattttggtcttagggctaaaccacttgaacctcaccaacaactcaaggctaagaaaatctatttcttagttgagctaccaaaagttcagtctcaaccat |
30371241 |
T |
|
| Q |
201 |
tgccgaggagggtgcgatccagtggattacacccttcatgtggcatgaacgctactgagaggctcgacttattgatgctatcgaaacgttctgtt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
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| T |
30371240 |
tgccgaggagggtgcgatccagtggattacacccttcatgtggcatgaacgctactgagaggctcgactttttgatgttatcgaaacgttctgtt |
30371146 |
T |
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