View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15744_high_7 (Length: 366)

Name: NF15744_high_7
Description: NF15744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15744_high_7
NF15744_high_7
[»] chr5 (35 HSPs)
chr5 (223-361)||(27429144-27429282)
chr5 (17-146)||(7035231-7035355)
chr5 (17-146)||(7079059-7079183)
chr5 (18-146)||(12880528-12880656)
chr5 (17-97)||(31271342-31271422)
chr5 (17-86)||(32298555-32298624)
chr5 (17-97)||(4049350-4049430)
chr5 (17-95)||(42062215-42062293)
chr5 (17-86)||(491375-491444)
chr5 (17-77)||(42288416-42288476)
chr5 (17-95)||(4101316-4101394)
chr5 (17-86)||(10931737-10931806)
chr5 (17-67)||(6644078-6644128)
chr5 (17-67)||(14084378-14084428)
chr5 (111-185)||(14084499-14084573)
chr5 (194-239)||(27429080-27429125)
chr5 (133-185)||(9163427-9163479)
chr5 (133-185)||(42062379-42062431)
chr5 (133-184)||(38254693-38254744)
chr5 (133-184)||(40083983-40084034)
chr5 (17-86)||(12724841-12724910)
chr5 (133-185)||(10931617-10931669)
chr5 (133-185)||(11877461-11877513)
chr5 (133-177)||(12880466-12880510)
chr5 (113-185)||(15678199-15678271)
chr5 (133-184)||(491253-491304)
chr5 (133-184)||(10017763-10017814)
chr5 (133-184)||(18158378-18158429)
chr5 (133-184)||(31271506-31271557)
chr5 (17-86)||(12786324-12786393)
chr5 (17-86)||(24510198-24510267)
chr5 (133-174)||(15397567-15397608)
chr5 (17-49)||(9163599-9163631)
chr5 (133-185)||(14949597-14949649)
chr5 (111-147)||(31271453-31271489)
[»] chr8 (41 HSPs)
chr8 (17-184)||(32415295-32415459)
chr8 (17-146)||(23950357-23950481)
chr8 (17-99)||(32551504-32551586)
chr8 (17-95)||(36684809-36684887)
chr8 (17-86)||(36054552-36054621)
chr8 (17-96)||(11989165-11989244)
chr8 (17-86)||(12615261-12615330)
chr8 (17-86)||(10921213-10921282)
chr8 (111-184)||(16383952-16384025)
chr8 (17-102)||(10954451-10954532)
chr8 (17-102)||(10962456-10962537)
chr8 (17-73)||(33303687-33303743)
chr8 (42-97)||(7323125-7323180)
chr8 (17-95)||(30577143-30577221)
chr8 (111-185)||(30577037-30577110)
chr8 (133-184)||(24580441-24580492)
chr8 (133-184)||(26241267-26241318)
chr8 (133-184)||(39506702-39506753)
chr8 (135-184)||(7323266-7323315)
chr8 (133-185)||(36684671-36684723)
chr8 (133-184)||(11989029-11989080)
chr8 (133-184)||(14921366-14921417)
chr8 (133-184)||(16365054-16365105)
chr8 (23-86)||(36918709-36918772)
chr8 (133-184)||(38600900-38600951)
chr8 (133-184)||(44755544-44755595)
chr8 (133-185)||(7383244-7383296)
chr8 (42-86)||(31519280-31519324)
chr8 (133-180)||(23950292-23950339)
chr8 (137-184)||(26106378-26106425)
chr8 (133-184)||(32551646-32551697)
chr8 (133-184)||(36054716-36054767)
chr8 (134-184)||(10921068-10921118)
chr8 (135-185)||(44710076-44710126)
chr8 (133-185)||(12637984-12638036)
chr8 (134-178)||(14541000-14541044)
chr8 (17-49)||(16383831-16383863)
chr8 (17-49)||(26241460-26241492)
chr8 (133-184)||(33303854-33303906)
chr8 (133-189)||(35056174-35056230)
chr8 (17-89)||(35737026-35737098)
[»] chr6 (34 HSPs)
chr6 (17-146)||(8437498-8437627)
chr6 (17-97)||(27613410-27613490)
chr6 (17-95)||(3027193-3027271)
chr6 (17-95)||(4111293-4111371)
chr6 (17-95)||(5153453-5153531)
chr6 (17-86)||(14610556-14610625)
chr6 (17-86)||(24012050-24012119)
chr6 (17-97)||(12296833-12296913)
chr6 (17-95)||(13276697-13276775)
chr6 (17-95)||(28890817-28890895)
chr6 (17-82)||(1449765-1449830)
chr6 (17-86)||(31803025-31803094)
chr6 (17-86)||(3728961-3729030)
chr6 (17-77)||(24849027-24849087)
chr6 (17-161)||(23645882-23646016)
chr6 (133-189)||(13276555-13276611)
chr6 (133-185)||(1101187-1101239)
chr6 (133-185)||(4111457-4111509)
chr6 (133-185)||(28890981-28891033)
chr6 (133-184)||(3027357-3027408)
chr6 (133-184)||(3729125-3729176)
chr6 (133-184)||(8437645-8437696)
chr6 (133-184)||(24848888-24848939)
chr6 (133-184)||(12296999-12297050)
chr6 (133-185)||(4174291-4174343)
chr6 (133-189)||(32187357-32187413)
chr6 (133-184)||(5153316-5153367)
chr6 (133-171)||(4229904-4229942)
chr6 (134-184)||(11982497-11982547)
chr6 (134-184)||(33042782-33042832)
chr6 (133-186)||(13041768-13041821)
chr6 (133-166)||(17156242-17156275)
chr6 (17-49)||(3257307-3257339)
chr6 (140-184)||(7458726-7458770)
[»] chr1 (64 HSPs)
chr1 (17-146)||(18353157-18353286)
chr1 (17-97)||(6889418-6889498)
chr1 (17-97)||(6891264-6891344)
chr1 (17-97)||(32239220-32239300)
chr1 (17-89)||(13253386-13253458)
chr1 (17-95)||(6888907-6888985)
chr1 (17-144)||(24038312-24038439)
chr1 (17-95)||(39860371-39860449)
chr1 (17-86)||(3831616-3831685)
chr1 (17-86)||(7109514-7109583)
chr1 (17-86)||(45372693-45372762)
chr1 (17-84)||(2988799-2988866)
chr1 (17-95)||(8417364-8417442)
chr1 (17-95)||(52222862-52222940)
chr1 (17-86)||(17805954-17806023)
chr1 (17-82)||(34084097-34084162)
chr1 (17-86)||(46846904-46846973)
chr1 (17-94)||(50096951-50097028)
chr1 (17-76)||(31493351-31493410)
chr1 (17-97)||(44969162-44969244)
chr1 (17-86)||(18437245-18437314)
chr1 (21-86)||(31225497-31225562)
chr1 (27-86)||(18448102-18448161)
chr1 (27-86)||(18453195-18453254)
chr1 (132-185)||(39860534-39860587)
chr1 (133-184)||(17805813-17805864)
chr1 (133-184)||(19709046-19709097)
chr1 (133-184)||(33785194-33785245)
chr1 (133-184)||(52222725-52222776)
chr1 (132-185)||(18437099-18437152)
chr1 (132-185)||(18447956-18448009)
chr1 (132-185)||(18453049-18453102)
chr1 (17-65)||(13884515-13884563)
chr1 (133-185)||(34083968-34084020)
chr1 (133-184)||(5500033-5500084)
chr1 (133-184)||(6889582-6889633)
chr1 (133-184)||(6891428-6891479)
chr1 (133-184)||(8417227-8417278)
chr1 (133-184)||(18353088-18353139)
chr1 (133-184)||(39919604-39919655)
chr1 (17-99)||(12029250-12029332)
chr1 (133-167)||(17386383-17386417)
chr1 (111-157)||(24509899-24509945)
chr1 (135-185)||(32239363-32239413)
chr1 (135-184)||(13077294-13077343)
chr1 (135-184)||(16452385-16452434)
chr1 (135-184)||(16461537-16461586)
chr1 (134-183)||(44779551-44779600)
chr1 (133-185)||(15321971-15322023)
chr1 (133-184)||(6305024-6305075)
chr1 (133-184)||(10805017-10805068)
chr1 (133-184)||(12298134-12298185)
chr1 (133-184)||(23555745-23555796)
chr1 (133-184)||(24038241-24038292)
chr1 (133-184)||(34050082-34050133)
chr1 (133-184)||(38672205-38672256)
chr1 (146-184)||(295432-295470)
chr1 (133-183)||(15849814-15849864)
chr1 (133-166)||(27090894-27090927)
chr1 (113-161)||(5506923-5506971)
chr1 (17-49)||(19708872-19708904)
chr1 (17-49)||(33785387-33785419)
chr1 (134-166)||(42384218-42384250)
chr1 (138-186)||(44912595-44912643)
[»] chr4 (53 HSPs)
chr4 (17-97)||(7363445-7363525)
chr4 (17-97)||(48801146-48801226)
chr4 (17-89)||(20039564-20039636)
chr4 (17-97)||(38307982-38308062)
chr4 (28-184)||(40412742-40412893)
chr4 (17-95)||(10010777-10010855)
chr4 (17-95)||(10017918-10017996)
chr4 (17-95)||(37010916-37010994)
chr4 (17-95)||(47691715-47691793)
chr4 (17-86)||(40730347-40730416)
chr4 (17-86)||(41487590-41487659)
chr4 (17-146)||(48089723-48089847)
chr4 (17-86)||(52225576-52225645)
chr4 (17-97)||(9627621-9627701)
chr4 (17-97)||(14599117-14599197)
chr4 (17-97)||(16711878-16711958)
chr4 (17-82)||(8672889-8672954)
chr4 (17-86)||(48826146-48826215)
chr4 (17-89)||(23106292-23106364)
chr4 (17-89)||(41324323-41324395)
chr4 (17-95)||(38973719-38973797)
chr4 (17-84)||(11845293-11845360)
chr4 (17-86)||(8753697-8753765)
chr4 (17-86)||(32212332-32212401)
chr4 (21-86)||(39787597-39787662)
chr4 (111-184)||(32212217-32212290)
chr4 (133-186)||(40730511-40730564)
chr4 (133-185)||(11845428-11845480)
chr4 (133-185)||(37011057-37011109)
chr4 (133-184)||(9627486-9627537)
chr4 (133-184)||(38308146-38308197)
chr4 (133-184)||(48826000-48826051)
chr4 (133-187)||(10010941-10010995)
chr4 (133-187)||(10018082-10018136)
chr4 (133-186)||(17981372-17981425)
chr4 (133-189)||(3097937-3097993)
chr4 (133-185)||(29590544-29590596)
chr4 (133-184)||(8753860-8753911)
chr4 (133-184)||(36488771-36488822)
chr4 (133-184)||(48089865-48089916)
chr4 (138-184)||(32468351-32468397)
chr4 (133-178)||(20392999-20393044)
chr4 (17-85)||(23370590-23370658)
chr4 (133-184)||(4422060-4422111)
chr4 (17-84)||(8946295-8946362)
chr4 (135-185)||(48659319-48659369)
chr4 (138-184)||(52225723-52225769)
chr4 (17-82)||(24390815-24390880)
chr4 (133-166)||(47691596-47691629)
chr4 (133-166)||(49389450-49389483)
chr4 (17-89)||(22608849-22608921)
chr4 (17-69)||(44523404-44523456)
chr4 (133-185)||(48801310-48801357)
[»] chr2 (35 HSPs)
chr2 (17-146)||(17852677-17852806)
chr2 (17-97)||(29557550-29557630)
chr2 (17-97)||(43616417-43616497)
chr2 (21-147)||(5936706-5936827)
chr2 (17-95)||(34726234-34726312)
chr2 (17-97)||(18075690-18075770)
chr2 (17-97)||(38213531-38213611)
chr2 (17-103)||(39133362-39133448)
chr2 (17-146)||(13029037-13029161)
chr2 (17-86)||(12033734-12033803)
chr2 (17-82)||(21198045-21198110)
chr2 (17-94)||(43999564-43999641)
chr2 (17-85)||(32084050-32084118)
chr2 (17-95)||(36983194-36983272)
chr2 (17-77)||(27670666-27670725)
chr2 (133-185)||(34726398-34726450)
chr2 (133-185)||(40737799-40737851)
chr2 (133-184)||(12033897-12033948)
chr2 (133-184)||(13029179-13029230)
chr2 (133-184)||(21198209-21198260)
chr2 (133-186)||(2995116-2995169)
chr2 (133-185)||(2182792-2182844)
chr2 (133-185)||(29768289-29768341)
chr2 (133-185)||(36985453-36985505)
chr2 (133-184)||(26260339-26260390)
chr2 (133-184)||(29044105-29044156)
chr2 (133-184)||(38448105-38448156)
chr2 (133-184)||(43616305-43616356)
chr2 (133-184)||(44092881-44092932)
chr2 (133-174)||(6420030-6420071)
chr2 (133-181)||(17852823-17852871)
chr2 (133-184)||(32084187-32084238)
chr2 (133-184)||(35959329-35959380)
chr2 (138-174)||(31452960-31452996)
chr2 (17-49)||(40737993-40738025)
[»] chr7 (42 HSPs)
chr7 (17-184)||(12077201-12077363)
chr7 (17-97)||(11410656-11410736)
chr7 (17-86)||(2732436-2732505)
chr7 (17-146)||(14776114-14776238)
chr7 (17-97)||(1411431-1411511)
chr7 (22-146)||(3357029-3357148)
chr7 (17-97)||(32670256-32670336)
chr7 (17-95)||(41399642-41399720)
chr7 (17-86)||(37807104-37807173)
chr7 (17-97)||(4067989-4068069)
chr7 (17-97)||(41892258-41892338)
chr7 (17-95)||(36820840-36820918)
chr7 (17-86)||(18533273-18533342)
chr7 (111-184)||(37806989-37807062)
chr7 (22-86)||(8485822-8485886)
chr7 (21-97)||(31673673-31673749)
chr7 (17-86)||(48214209-48214278)
chr7 (17-67)||(34521165-34521215)
chr7 (133-185)||(41892122-41892174)
chr7 (133-185)||(14776256-14776308)
chr7 (133-184)||(2732290-2732341)
chr7 (133-184)||(3356960-3357011)
chr7 (133-184)||(11410521-11410572)
chr7 (133-184)||(15943192-15943243)
chr7 (134-184)||(2941203-2941253)
chr7 (133-174)||(10227868-10227909)
chr7 (137-185)||(1411599-1411647)
chr7 (134-186)||(34521318-34521370)
chr7 (17-100)||(35516412-35516495)
chr7 (123-186)||(36820930-36820993)
chr7 (133-174)||(12419226-12419267)
chr7 (133-174)||(13391064-13391105)
chr7 (137-182)||(43596252-43596297)
chr7 (133-184)||(21806500-21806551)
chr7 (141-184)||(23671227-23671270)
chr7 (133-184)||(31377365-31377416)
chr7 (133-184)||(41399784-41399834)
chr7 (133-184)||(41902911-41902962)
chr7 (133-184)||(44848016-44848067)
chr7 (139-185)||(2196043-2196089)
chr7 (17-82)||(25076882-25076947)
chr7 (17-49)||(15943018-15943050)
[»] chr3 (55 HSPs)
chr3 (17-146)||(19421031-19421155)
chr3 (17-146)||(29076933-29077057)
chr3 (17-86)||(41873528-41873597)
chr3 (17-97)||(20647706-20647786)
chr3 (17-97)||(40488956-40489036)
chr3 (17-146)||(34636406-34636530)
chr3 (17-86)||(39171351-39171420)
chr3 (17-86)||(46068132-46068201)
chr3 (17-86)||(47844646-47844715)
chr3 (17-86)||(54650587-54650656)
chr3 (17-97)||(33069345-33069425)
chr3 (17-97)||(34422577-34422657)
chr3 (17-85)||(39391197-39391265)
chr3 (17-95)||(1782595-1782673)
chr3 (17-95)||(33249549-33249627)
chr3 (17-95)||(52174716-52174794)
chr3 (17-86)||(13596280-13596349)
chr3 (17-86)||(24540914-24540983)
chr3 (17-86)||(25536982-25537051)
chr3 (17-86)||(28793794-28793863)
chr3 (17-86)||(40000444-40000513)
chr3 (17-86)||(40000690-40000759)
chr3 (17-86)||(53002287-53002356)
chr3 (17-86)||(55008237-55008306)
chr3 (17-95)||(33370525-33370603)
chr3 (17-86)||(47596995-47597064)
chr3 (17-89)||(46116560-46116632)
chr3 (133-185)||(33069498-33069550)
chr3 (28-86)||(18984154-18984212)
chr3 (133-185)||(1782759-1782811)
chr3 (133-185)||(9338335-9338387)
chr3 (133-185)||(34705384-34705436)
chr3 (133-185)||(39391049-39391101)
chr3 (133-185)||(40000854-40000906)
chr3 (133-184)||(13596161-13596212)
chr3 (133-184)||(19420962-19421013)
chr3 (133-184)||(20647870-20647921)
chr3 (133-184)||(28793648-28793699)
chr3 (133-184)||(29076864-29076915)
chr3 (17-57)||(25537108-25537148)
chr3 (133-185)||(26994834-26994886)
chr3 (133-184)||(4357097-4357148)
chr3 (133-184)||(4481649-4481700)
chr3 (133-184)||(24541051-24541102)
chr3 (133-184)||(33249412-33249463)
chr3 (133-184)||(47597159-47597210)
chr3 (133-185)||(41636282-41636334)
chr3 (133-184)||(51302361-51302412)
chr3 (133-184)||(54447581-54447632)
chr3 (142-184)||(33910156-33910198)
chr3 (17-67)||(46181778-46181827)
chr3 (111-144)||(13596232-13596265)
chr3 (133-186)||(43010309-43010362)
chr3 (134-174)||(14751814-14751854)
chr3 (17-49)||(34705210-34705242)
[»] scaffold1625 (1 HSPs)
scaffold1625 (17-96)||(1325-1404)
[»] scaffold0217 (2 HSPs)
scaffold0217 (17-95)||(15704-15782)
scaffold0217 (144-184)||(15339-15379)
[»] scaffold0037 (2 HSPs)
scaffold0037 (17-95)||(81249-81327)
scaffold0037 (133-184)||(81413-81464)
[»] scaffold0259 (2 HSPs)
scaffold0259 (17-89)||(24920-24992)
scaffold0259 (111-186)||(24806-24881)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-97)||(218181-218261)
[»] scaffold0129 (2 HSPs)
scaffold0129 (17-95)||(41037-41114)
scaffold0129 (133-184)||(40900-40951)
[»] scaffold0065 (1 HSPs)
scaffold0065 (17-82)||(40125-40190)
[»] scaffold0067 (2 HSPs)
scaffold0067 (17-89)||(14249-14321)
scaffold0067 (133-184)||(14412-14463)
[»] scaffold0422 (1 HSPs)
scaffold0422 (133-185)||(10637-10689)
[»] scaffold1702 (1 HSPs)
scaffold1702 (133-184)||(2-53)
[»] scaffold0275 (1 HSPs)
scaffold0275 (133-184)||(9151-9202)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 27429144 - 27429282
Alignment:
Q  223 gtaataaatcatactttgttaaaagggaagttgtttcggtccacatagagatttggactaaaaatgtacttgtatagatttggtataagattaggcaatt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27429144 gtaataaatcatactttgttaaaagggaagttgtttcggtccacatagagatttggactaaaaatgtacttgtatagatttggtataagattaggcaatt 27429243  T
Q  323 ttacactaagtttgtttaagattgatttcctttgcttct 361  Q
    | |||||||||||||||||||||||||| ||||| ||||    
T  27429244 taacactaagtttgtttaagattgattttctttgtttct 27429282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 7035355 - 7035231
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||     ||||||||||||        ||||||    
T  7035355 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcag-----gccagaccagaccaaaaaaataggcc 7035261  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  7035260 tatgaaaggccataggccaggctcaggcct 7035231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 7079183 - 7079059
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     |||||||||| |        ||||||    
T  7079183 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcag-----gccagaccaggccaaaaaaataggcc 7079089  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  7079088 tatgaaaggccataggccaggctcaggcct 7079059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 12880656 - 12880528
Alignment:
Q  18 tttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcct 117  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||| ||||||        |||||||    
T  12880656 tttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctctaaataggctttcaggccaggccaggccagaccaaaaaaataggcct 12880557  T
Q  118 atgaaaggccataaaccaggctcaggcct 146  Q
    |||||||| ||||  ||||||||||||||    
T  12880556 atgaaaggtcataggccaggctcaggcct 12880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 31271342 - 31271422
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  31271342 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 31271422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 32298555 - 32298624
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32298555 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 32298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 4049350 - 4049430
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  4049350 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 4049430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 42062215 - 42062293
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||    
T  42062215 atttaaaagtagataaaatggaatgtttagcgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 42062293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 491444 - 491375
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  491444 atttaaaagtagataaaatggaatgtttagcgactttaatagtaagtaggcctgtaaataggctttcagg 491375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 42288416 - 42288476
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatag 77  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42288416 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaatag 42288476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 4101394 - 4101316
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||| || |||||    
T  4101394 atttaaaagtagataaaatggaatgtttagtaactttaatagtaagtaggcttgtaaataggctttcaggccaggccag 4101316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 10931806 - 10931737
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||    
T  10931806 atttaaaagtagataaaatggaatgcttagtgactttaatagtaagcagacctgtaaataggctttcagg 10931737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 6644078 - 6644128
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggc 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  6644078 atttaaaagtagataaaatggaatgtttagtgactttaatagtaaataggc 6644128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 14084378 - 14084428
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggc 67  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  14084378 atttaaaagtagataaaatggaatgtttagtgactataatagtaagtaggc 14084428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 14084499 - 14084573
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||   |||||||||||||||||||  ||| ||||||||||||||||  |||||||||    
T  14084499 taggcctatgaaaggccatacgtcaggctcaggcctatcaaagcctgacctggcctggcctattctcaaccctaa 14084573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 27429080 - 27429125
Alignment:
Q  194 ccatagtaataagtttctaaattatgatcgtaataaatcatacttt 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  27429080 ccatagtaataagtttctaaattatgattgtaataaatcatacttt 27429125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 9163479 - 9163427
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  9163479 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 9163427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 42062379 - 42062431
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  42062379 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 42062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 38254744 - 38254693
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  38254744 ccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 38254693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 40084034 - 40083983
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  40084034 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 40083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 12724841 - 12724910
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||| |||||||  |||||||| ||||||| ||| |||||| |||||||||||| ||||||||    
T  12724841 atttaaaagtaaataaaatagaatgtttaatgacttttataataagtatgcctgtaaataggctttcagg 12724910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 10931669 - 10931617
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||| ||||||||||||||||||||||||| || |||||||| ||||||||||    
T  10931669 ccagactcaggcctatcaaaatctggcctgaccaggcctattcccaaccctaa 10931617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 11877513 - 11877461
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  ||||||||||||| |||||| ||||||||||    
T  11877513 ccaggctcaggcctatcaaagcctggcctggcctgacctattcccaaccctaa 11877461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 12880510 - 12880466
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttcc 177  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  12880510 ccaggctcaggcctatcaaagcctggcctggcctggcctatttcc 12880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 15678199 - 15678271
Alignment:
Q  113 ggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||| || ||||| || || ||||||||||||||||||||| |||||| |||||||| ||| ||||||    
T  15678199 ggcctatgatagaccatagactagactcaggcctatcaaaatctggtctggccaggcctattcccacccctaa 15678271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 491304 - 491253
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||| ||||||||||||  |||||||||||||||||||| |||||||||    
T  491304 ccaggcttaggcctatcaaagcctggcctggcctggcctattcccaacccta 491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 10017814 - 10017763
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  10017814 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 10017763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 18158429 - 18158378
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  18158429 ccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 18158378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 31271506 - 31271557
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||| ||||||||||||  |||||||||||||||||||| |||||||||    
T  31271506 ccaggcttaggcctatcaaagcctggcctggcctggcctattcccaacccta 31271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 12786324 - 12786393
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||| |||||||  |||||||| ||||||| ||| |||||| | |||||||||| ||||||||    
T  12786324 atttaaaagtaaataaaatagaatgtttaatgacttttataataagtatgtctgtaaataggctttcagg 12786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 24510267 - 24510198
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||| ||||||| |||||  ||| |||| |||||||||||  |||||||||||||||||||||| ||||    
T  24510267 atttagaagtagacaaaattgaatatttaatgactttaatatcaagtaggcctgtaaatagacttccagg 24510198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 15397608 - 15397567
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  15397608 ccaggctcagacctatcaaagtctggcctggcctgacctatt 15397567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 9163631 - 9163599
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  9163631 atttaaaagtagataaaatggaatgtttagtga 9163599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 14949597 - 14949649
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||| |||||||||  ||||||||||||| |||||| ||| ||||||    
T  14949597 ccaggctcagacctatcaaagcctggcctggcctgacctattcccacccctaa 14949649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 31271453 - 31271489
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggccta 147  Q
    ||||||||||||||||||||  |||||||||||||||    
T  31271453 taggcctatgaaaggccataggccaggctcaggccta 31271489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 32415295 - 32415459
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||| | |         ||||||    
T  32415295 atttaaaagtagataaaatggaatatttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagacaaaa---aaaaaataggcc 32415391  T
Q  117 tatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||   |||||||||||||||||||  ||| |||||||||||||||| |||||||||    
T  32415392 tatgaaaggccataggtcaggctcaggcctatcaaagcctgacctggcctggcctattcccaacccta 32415459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 23950481 - 23950357
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |         ||||||    
T  23950481 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagaccaaa-----aaaataggcc 23950387  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  23950386 tatgaaaggccataggccaggctcaggcct 23950357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 32551504 - 32551586
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagacca 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||    
T  32551504 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagacca 32551586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 36684887 - 36684809
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  36684887 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 36684809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 36054552 - 36054621
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36054552 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 36054621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11989244 - 11989165
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccaga 96  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||    
T  11989244 atttaaaagtagataaaatggaatgtttagtgactttaatggtaagtaggcctgtaaataggctttcaggccaggccaga 11989165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 12615330 - 12615261
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  12615330 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaataggctttcagg 12615261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 10921282 - 10921213
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  10921282 atttaaaagtaaataaaatggaatgtttagtgactttaatagtatgtaggcctgtaaataggctttcagg 10921213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 16383952 - 16384025
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  16383952 taggcctatgaaaggccataggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 16384025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10954532 - 10954451
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagac 102  Q
    ||||||||||||||||||||||||||||||||||||||||    || |||||||||||||  |||||||| || ||||||||||||    
T  10954532 atttaaaagtagataaaatgaaatgtttagtgactttaat----agaaggcctgtaaataagctttcaggccaggccagaccagac 10954451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 10962537 - 10962456
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagac 102  Q
    ||||||||||||||||||||||||||||||||||||||||    || |||||||||||||  |||||||| || ||||||||||||    
T  10962537 atttaaaagtagataaaatgaaatgtttagtgactttaat----agaaggcctgtaaataagctttcaggccaggccagaccagac 10962456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33303687 - 33303743
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaa 73  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  33303687 atttaaaagtagataaaatggaatgcttagtgactttaatagtaagtaggcctgtaa 33303743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 7323125 - 7323180
Alignment:
Q  42 tttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7323125 tttagtgactttaatagtaagtaggcctgtaaataggctttcaggtcaggccagac 7323180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 30577221 - 30577143
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    ||||||||||||||| |||| ||||||| |||| ||||||||||||||||||| ||||||| |||||||| || |||||    
T  30577221 atttaaaagtagatagaatggaatgtttggtgattttaatagtaagtaggcctctaaataggctttcaggccaggccag 30577143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 30577110 - 30577037
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||| |||||||||  |||||||| ||||||||||| ||||||||||    
T  30577110 taggcctatgaaaggccataggccaggctcag-cctatcaaagcctggcctgccctggcctattcccaaccctaa 30577037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 24580492 - 24580441
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  24580492 ccaggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 24580441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 26241318 - 26241267
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  26241318 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 26241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 39506702 - 39506753
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  39506702 ccaggctcaggcctttcaaagtctggtctggcctggcctatttccaacccta 39506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 7323266 - 7323315
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  7323266 aggctcaggcctattaaagtctggcctggcctggcctattcccaacccta 7323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 36684723 - 36684671
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||||||||||    
T  36684723 ccaggctcaggcctatcaaagcgtggcctggcctggcctattcccaaccctaa 36684671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 11989080 - 11989029
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  11989080 ccaggctcaggcctatcaaagcatggcctggcctggcctattcccaacccta 11989029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 14921417 - 14921366
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  14921417 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 14921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 16365054 - 16365105
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  16365054 ccagactcaggcctatcaaagtctggcctggcctggcctattcccaccccta 16365105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 36918772 - 36918709
Alignment:
Q  23 aagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||| ||||||| | ||||||| ||||||||||  ||||||||||||||||||| ||||||||    
T  36918772 aagtaaataaaataacatgtttaatgactttaatcataagtaggcctgtaaataggctttcagg 36918709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 38600900 - 38600951
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  38600900 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 38600951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 44755595 - 44755544
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  44755595 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 44755544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 7383244 - 7383296
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||| ||||||    
T  7383244 ccaggctcaggcctatcaaagcctggcttggcctggcctattcccacccctaa 7383296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 31519324 - 31519280
Alignment:
Q  42 tttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||    
T  31519324 tttaatgactttaataataagtaggcctgtaaataggctttcagg 31519280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 23950339 - 23950292
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaac 180  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||    
T  23950339 ccaggctcaggcttatcaaagcctggcctggcctggcctattcccaac 23950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 26106425 - 26106378
Alignment:
Q  137 gctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||| |||||  |||||||||||||||||||| |||||||||    
T  26106425 gctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 26106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 32551646 - 32551697
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||| ||| |||||| |||||||||    
T  32551646 ccaggctcaggcctatcaaagcctggcctggtctgacctattcccaacccta 32551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 36054716 - 36054767
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||  ||||||||| |||||||||    
T  36054716 ccaggctcaggcctatcaaagcctggcctggtatggcctattcccaacccta 36054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 10921118 - 10921068
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||  |||||||||||  ||||||| |||||||||    
T  10921118 caggctcaggcctatcaaagcctggcctggccaagcctattcccaacccta 10921068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 44710126 - 44710076
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||| ||||| ||| ||||||||||| ||| ||||||    
T  44710126 aggctcaggcctatcaaagtctggtctgacctggcctattcccatccctaa 44710076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 12638036 - 12637984
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||| ||||||||||||  ||||||||||||| |||||| ||| ||||||    
T  12638036 ccaggcttaggcctatcaaagcctggcctggcctgacctattcccacccctaa 12637984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 14541000 - 14541044
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttcca 178  Q
    ||||||||| ||||||||| | ||| |||||||||||||||||||    
T  14541000 caggctcagacctatcaaagtatggtctggcctggcctatttcca 14541044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 16383831 - 16383863
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  16383831 atttaaaagtagataaaatggaatgtttagtga 16383863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 26241492 - 26241460
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  26241492 atttaaaagtagataaaatggaatgtttagtga 26241460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 33303854 - 33303906
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcc-tggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||| |||| |||| |||||||||    
T  33303854 ccaggctcaggcctatcaaagcctggcctggccntggcgtattcccaacccta 33303906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 35056230 - 35056174
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaaccat 189  Q
    ||||||||||||||||||||  ||| |||| ||||||||||| ||| ||||| ||||    
T  35056230 ccaggctcaggcctatcaaagcctgacctgacctggcctattcccacccctagccat 35056174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 35737026 - 35737098
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||| ||||||||||||| | |||| |||||||||||  || ||| | | |||||||||||| ||||||    
T  35737026 atttaaaaatagataaaatgaactatttaatgactttaatataaaatagacatataaatagacttttaggtca 35737098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 8437498 - 8437627
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||| |        ||||||    
T  8437498 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtagacctgtaaataggctttcaggtcaggccaggccaggccaaaaaaataggcc 8437597  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  8437598 tatgaaaggccataggccaggctcaggcct 8437627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 27613490 - 27613410
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  27613490 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 27613410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 3027193 - 3027271
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  3027193 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 3027271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 4111293 - 4111371
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  4111293 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 4111371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 5153531 - 5153453
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  5153531 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 5153453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 14610556 - 14610625
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14610556 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggttttcagg 14610625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 24012119 - 24012050
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24012119 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 24012050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12296833 - 12296913
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||||    
T  12296833 atttaaaagtagataaaatggaatgtttagtgactttaatagtaattaggcctgtaaataggctttcaggccaggccagac 12296913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13276775 - 13276697
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  13276775 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 13276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 28890817 - 28890895
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  28890817 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 28890895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 1449765 - 1449830
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  1449765 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttt 1449830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 31803025 - 31803094
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31803025 atttaaaagtatataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 31803094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 3728961 - 3729030
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  3728961 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggtctgtaaataggctttcagg 3729030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 24849087 - 24849027
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatag 77  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  24849087 atttaaaagtagataaaattgaatgtttagtgactttaatagtaagtaggcctgtaaatag 24849027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 23646016 - 23645882
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||  |||||||| || |||| |  |           ||||||    
T  23646016 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaagcctgtaaatacgctttcaggccaggccaaaaaa----------ataggcc 23645927  T
Q  117 tatgaaaggccataaaccaggctcaggcctatcaaaatctggcct 161  Q
    ||||||||||||||  ||||||||||||||||||||  |||||||    
T  23645926 tatgaaaggccataggccaggctcaggcctatcaaagcctggcct 23645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 13276611 - 13276555
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaaccat 189  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  13276611 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaaccat 13276555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 1101239 - 1101187
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  1101239 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1101187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 4111457 - 4111509
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  4111457 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 4111509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 28890981 - 28891033
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  28890981 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 28891033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 3027357 - 3027408
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  3027357 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3027408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 3729125 - 3729176
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  3729125 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3729176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 8437645 - 8437696
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  8437645 ccagactcaggcctatcaaagtctggcctggcctggcctattcccaacccta 8437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 24848939 - 24848888
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24848939 ccagactcaggcctatcaaagtctggcctcgcctggcctatttccaacccta 24848888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 12296999 - 12297050
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  12296999 ccagactcagacctatcaaagtctggcctggcctggcctattcccaacccta 12297050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 4174291 - 4174343
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||| ||||||    
T  4174291 ccaggctcaggcctatcaaagcctggcatggcctggcctattcccacccctaa 4174343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 32187357 - 32187413
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaaccat 189  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||| ||||| ||||    
T  32187357 ccaggctcaggcctatcaaagcatggcctggcctggcctattcccacccctacccat 32187413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 5153367 - 5153316
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||| | |||||||  |||||||||||||||||||| |||||||||    
T  5153367 ccaggctcagacttatcaaagcctggcctggcctggcctattcccaacccta 5153316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 4229904 - 4229942
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcct 171  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  4229904 ccaggctcaggcctatcaaagcctggcctggcctggcct 4229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 11982497 - 11982547
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||| ||||| ||| ||||||||||||||||||||| ||| |||||    
T  11982497 caggctcagacctattaaagtctggcctggcctggcctattcccaccccta 11982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 33042832 - 33042782
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| ||||  |||||||||||||| ||| |||||    
T  33042832 caggctcaggcctatcaaaacctggtttggcctggcctattcccatcccta 33042782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 13041768 - 13041821
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||| |||||||||||||||  || ||||||||||||||||| ||| |||||||    
T  13041768 ccagactcaggcctatcaaagcctagcctggcctggcctattcccacccctaac 13041821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 17156275 - 17156242
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcct 166  Q
    ||||||||||||||||||||| ||||||||||||    
T  17156275 ccaggctcaggcctatcaaaacctggcctggcct 17156242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 3257339 - 3257307
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  3257339 atttaaaagtagataaaatggaatgtttagtga 3257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 7458770 - 7458726
Alignment:
Q  140 caggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||| ||||| |||||||||||||| |||||| |||||||||    
T  7458770 caggcctttcaaagtctggcctggcctgacctattcccaacccta 7458726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 18353286 - 18353157
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||  |||| ||||||        ||||||    
T  18353286 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccagaccaggccagaccaaaataataggcc 18353187  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||| ||||||||||||||    
T  18353186 tatgaaaggccataagccaggctcaggcct 18353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 6889418 - 6889498
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6889418 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtcaggccagac 6889498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 6891264 - 6891344
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  6891264 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtcaggccagac 6891344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 32239220 - 32239300
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  32239220 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaatagtctttcaggccaagccagac 32239300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 13253458 - 13253386
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13253458 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtca 13253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 6888907 - 6888985
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||    
T  6888907 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatatgcttttaggtcaggccag 6888985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 24038439 - 24038312
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||  | ||||| ||||||        ||||||    
T  24038439 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcgggctaggccaggccagaccaaaaaaataggcc 24038340  T
Q  117 tatgaaaggccataaaccaggctcaggc 144  Q
    ||||||||||||||  | ||||||||||    
T  24038339 tatgaaaggccataggctaggctcaggc 24038312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 39860371 - 39860449
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  39860371 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 39860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 3831685 - 3831616
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3831685 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 3831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 7109514 - 7109583
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7109514 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 7109583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 45372693 - 45372762
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45372693 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 45372762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 2988866 - 2988799
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttca 84  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  2988866 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaatagactttca 2988799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 8417442 - 8417364
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  8417442 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 8417364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 52222940 - 52222862
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  52222940 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 52222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 17806023 - 17805954
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17806023 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 17805954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 34084162 - 34084097
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  34084162 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttt 34084097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 46846973 - 46846904
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46846973 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 46846904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 50096951 - 50097028
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagcca 94  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||| |||||||| |||||||    
T  50096951 atttaaaagtagataaaatggaatgtttagttactttaatagtaagtagacttgtaaataggctttcaggccaagcca 50097028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 31493351 - 31493410
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaata 76  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  31493351 atttaaaagtagataaaatggaatgtttagtgactttaatagtaaataggcctgtaaata 31493410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 44969244 - 44969162
Alignment:
Q  17 atttaaaagtagataaaatgaaat--gtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||  |||| |||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  44969244 atttaaaagtagataaaatggaatatgtttggtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 44969162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 18437314 - 18437245
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  18437314 atttcaaagtagataaaatggaatgtttagtgattttaatagtaagtaggcctgtaaataggcttacagg 18437245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 31225497 - 31225562
Alignment:
Q  21 aaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  31225497 aaaagtagataaaatggaatgtttagtgactttaatagtaagtatgcttgtaaataggctttcagg 31225562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 18448161 - 18448102
Alignment:
Q  27 agataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  18448161 agataaaatggaatgtttagtgattttaatagtaagtaggcctgtaaataggcttacagg 18448102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 18453254 - 18453195
Alignment:
Q  27 agataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  18453254 agataaaatggaatgtttagtgattttaatagtaagtaggcctgtaaataggcttacagg 18453195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 39860534 - 39860587
Alignment:
Q  132 accaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  39860534 accaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 39860587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 17805864 - 17805813
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  17805864 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 17805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 19709046 - 19709097
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  19709046 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 19709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 33785245 - 33785194
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  33785245 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 33785194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 52222776 - 52222725
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  52222776 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 52222725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 18437152 - 18437099
Alignment:
Q  132 accaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  18437152 accaggctcaggcctatcaaagtctgacctggtttggcctatttccaaccctaa 18437099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 18448009 - 18447956
Alignment:
Q  132 accaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  18448009 accaggctcaggcctatcaaagtctgacctggtttggcctatttccaaccctaa 18447956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 18453102 - 18453049
Alignment:
Q  132 accaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  18453102 accaggctcaggcctatcaaagtctgacctggtttggcctatttccaaccctaa 18453049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 13884515 - 13884563
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtag 65  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  13884515 atttaaaagtagataaaatggaatgttcagtgactttaataataagtag 13884563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 34084020 - 34083968
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| |||||||||| |||||||||| | ||||||||    
T  34084020 ccaggctcaggcctatcaaagtctggcctggtctggcctattcctaaccctaa 34083968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 5500033 - 5500084
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  5500033 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 5500084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 6889582 - 6889633
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||||    
T  6889582 ccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 6891428 - 6891479
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||| ||||||| |||||||||    
T  6891428 ccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 8417278 - 8417227
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||| ||||    
T  8417278 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaatccta 8417227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 18353139 - 18353088
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  18353139 ccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 18353088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 39919655 - 39919604
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  39919655 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 39919604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 12029250 - 12029332
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagacca 99  Q
    ||||| |||||||||||||| |||||||| ||| ||||||| ||||||||  ||||||||   ||||||| || |||||||||    
T  12029250 atttagaagtagataaaatggaatgtttaatgaatttaataataagtaggtttgtaaatatgttttcaggccaggccagacca 12029332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 17386383 - 17386417
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctg 167  Q
    |||||||||||||||||||||||||||||||||||    
T  17386383 ccaggctcaggcctatcaaaatctggcctggcctg 17386417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 24509899 - 24509945
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctg 157  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  24509899 taggcctatgaaaggccatatgccaggctcaggcctatcaaagtctg 24509945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 32239363 - 32239413
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||| ||||||||||||| |||||| | ||||||||    
T  32239363 aggctcaggcctatcaaaacctggcctggcctgacctattcctaaccctaa 32239413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 13077343 - 13077294
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||| |||||    
T  13077343 aggctcaggcctatcaaagtctggcctgacctggcctattcccaccccta 13077294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 16452434 - 16452385
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  16452434 aggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16452385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 16461586 - 16461537
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  16461586 aggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 16461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 44779551 - 44779600
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaaccct 183  Q
    |||||||||||||||||||  |||||||||||||||||||| ||| ||||    
T  44779551 caggctcaggcctatcaaagcctggcctggcctggcctattcccacccct 44779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 15321971 - 15322023
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||| ||||||||||| ||| ||||||    
T  15321971 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccacccctaa 15322023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 6305075 - 6305024
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||| |||||||||  |||||||||||||||||||| ||| |||||    
T  6305075 ccaggctcagacctatcaaagcctggcctggcctggcctattcccaccccta 6305024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 10805068 - 10805017
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||| ||||||||||  |||||||||||||||||||| ||| |||||    
T  10805068 ccaggctcatgcctatcaaagcctggcctggcctggcctattcccaccccta 10805017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 12298185 - 12298134
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| |||||||||||||||| || ||||||||||||||||| ||| |||||    
T  12298185 ccagactcaggcctatcaaaacctagcctggcctggcctattcccaccccta 12298134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 23555796 - 23555745
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||| |||||||||||||||| ||| |||||    
T  23555796 ccaggctcaggcctatcaaagcctgacctggcctggcctattcccaccccta 23555745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 24038292 - 24038241
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||| |||| |||||| |||||||||    
T  24038292 ccaggctcaggcctatcaaagcctggcctgacctgacctattcccaacccta 24038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 34050082 - 34050133
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||  ||||||||| |||||||||||||| |||||||||| |||||    
T  34050082 ccaggctcaaacctatcaaagtctggcctggcctgacctatttccaccccta 34050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 38672205 - 38672256
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||| |||||||||  ||||||||| ||| |||||    
T  38672205 ccaggctcaggcctatcaaaacctggcctggtttggcctattcccaccccta 38672256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 295470 - 295432
Alignment:
Q  146 tatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  295470 tatcaaagtctggcctggcctggcctattcccaacccta 295432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 15849864 - 15849814
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccct 183  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||| ||||    
T  15849864 ccagactcaggcctatcaaatcctggcctggcctggcctattcccacccct 15849814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 27090894 - 27090927
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcct 166  Q
    |||||||||||||||||||| |||||||||||||    
T  27090894 ccaggctcaggcctatcaaagtctggcctggcct 27090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 5506923 - 5506971
Alignment:
Q  113 ggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcct 161  Q
    ||||||||| ||||||||  ||||||||||||||||||||  |||||||    
T  5506923 ggcctatgataggccataggccaggctcaggcctatcaaagcctggcct 5506971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 19708872 - 19708904
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  19708872 atttaaaagtagataaaatggaatgtttagtga 19708904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 33785419 - 33785387
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  33785419 atttaaaagtagataaaatggaatgtttagtga 33785387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 42384250 - 42384218
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcct 166  Q
    ||||||||||||||||||| |||||||||||||    
T  42384250 caggctcaggcctatcaaagtctggcctggcct 42384218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 44912643 - 44912595
Alignment:
Q  138 ctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    ||||||||||||||| ||||||||| |||| |||||| ||| |||||||    
T  44912643 ctcaggcctatcaaagtctggcctgacctgacctattcccatccctaac 44912595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 7363445 - 7363525
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7363445 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtcaggccagac 7363525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 48801146 - 48801226
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  48801146 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaaaccagac 48801226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 20039564 - 20039636
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20039564 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtca 20039636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 38307982 - 38308062
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  38307982 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 38308062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 40412742 - 40412893
Alignment:
Q  28 gataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcctatgaaaggcc 127  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||| |         |||||||||||||||||    
T  40412742 gataaaatggaatatttagtgactttaatagtaagtaggcctgtaaataggctttcagatcagaccagaccaaa-----aaaataggcctatgaaaggcc 40412836  T
Q  128 ataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||  | || |||||||||||||||  ||||||||||||| |||||| |||||||||    
T  40412837 ataggctagactcaggcctatcaaagcctggcctggcctgacctattcccaacccta 40412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10010777 - 10010855
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  10010777 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 10010855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10017918 - 10017996
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  10017918 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 10017996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 37010916 - 37010994
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  37010916 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 37010994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 47691793 - 47691715
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  47691793 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 47691715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 40730347 - 40730416
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40730347 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 40730416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 41487659 - 41487590
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  41487659 atttaaaagtagataaaatgaaatgtttaatgactttaatagtaagtaggcctgtaaataggctttcagg 41487590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 48089723 - 48089847
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||  || ||||| ||| |         ||||||    
T  48089723 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagaccaggccaggccaaa-----aaaataggcc 48089817  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  48089818 tatgaaaggccatatgccaggctcaggcct 48089847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 52225576 - 52225645
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52225576 atttaaaaatagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 52225645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 9627701 - 9627621
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||    
T  9627701 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagaaggcctataaataggctttcaggtcaggccagac 9627621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 14599197 - 14599117
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| || |||||||    
T  14599197 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaaataagcctgtaaataggctttcaggccaggccagac 14599117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 16711958 - 16711878
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  16711958 atttaaaagtatataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggttttcaggtcaggccagac 16711878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 8672954 - 8672889
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  8672954 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttt 8672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 48826215 - 48826146
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  48826215 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctataaataggctttcagg 48826146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 23106292 - 23106364
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  23106292 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaagcttgtaaataggctttcaggtca 23106364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 41324323 - 41324395
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41324323 atttaaaaatagataaaatggaatgtttagtgactttaatagtaagtagccctgtaaataggctttcaggtca 41324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 38973797 - 38973719
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  38973797 atttaaaaatagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 38973719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 11845293 - 11845360
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttca 84  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  11845293 atttaaaagtagataaagtggaatgtttagtgactttaatagtaagtaggcctttaaataggctttca 11845360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 8753697 - 8753765
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  8753697 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctat-aataggctttcagg 8753765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 32212401 - 32212332
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  32212401 atttaaaagtagacaaaattgaatgtttagtgactttaatagtaagtaggcctgtgaataagctttcagg 32212332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 39787597 - 39787662
Alignment:
Q  21 aaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||  |||||||    
T  39787597 aaaaatagataaaatggaatgtttagtgactttaatagtaagtagacctgtaaataggttttcagg 39787662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 32212290 - 32212217
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||| ||||  || |||||||||||||||||  ||||||| |||||||||||| |||||||||    
T  32212290 taggcctatgaaaggtcataggcccggctcaggcctatcaaagcctggcctagcctggcctattcccaacccta 32212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 40730511 - 40730564
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  40730511 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaac 40730564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 11845428 - 11845480
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  11845428 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 11845480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 37011057 - 37011109
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  37011057 ccaggctcaggcctatcaaagtctggcctggcctagcctattcccaaccctaa 37011109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 9627537 - 9627486
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  9627537 ccaggctcaggcctatcaaagcctggcctgacctggcctatttccaacccta 9627486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 38308146 - 38308197
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  38308146 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 38308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 48826051 - 48826000
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  48826051 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 48826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 10010941 - 10010995
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaacc 187  Q
    ||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||    
T  10010941 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaacc 10010995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 10018082 - 10018136
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaacc 187  Q
    ||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||    
T  10018082 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaacc 10018136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 17981372 - 17981425
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  17981372 ccaggctcaggcctatcaaagtctggtctggcctggcctattcccacccctaac 17981425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 3097937 - 3097993
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaaccat 189  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| ||||| ||||    
T  3097937 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctacccat 3097993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 29590544 - 29590596
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| ||||||    
T  29590544 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccacccctaa 29590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 8753860 - 8753911
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||||||    
T  8753860 ccaggctcatgcctatcaaagcctggcctggcctggcctattcccaacccta 8753911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 36488822 - 36488771
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||| |||||    
T  36488822 ccaggctcagacctatcaaagtctggcctggcctggcctattcccatcccta 36488771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 48089865 - 48089916
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||| |||||||||||||||| |||||||||    
T  48089865 ccaggctcaggcctatcaaagcctgacctggcctggcctattcccaacccta 48089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 32468351 - 32468397
Alignment:
Q  138 ctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||||    
T  32468351 ctcaggtctatcaaagtctggcctggcctggcctatttccaccccta 32468397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 20392999 - 20393044
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttcca 178  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  20392999 ccaggctcaggcctatcaaagcctgacctggcctggcctatttcca 20393044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 23370658 - 23370590
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcag 85  Q
    ||||| ||||||| |||||  |||||||| ||| |||||||  |||||||||| |||||||||||||||    
T  23370658 atttagaagtagacaaaattgaatgtttaatgattttaatatgaagtaggcctttaaatagactttcag 23370590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 4422111 - 4422060
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||| ||||||||  |||||||||||||||||||| ||| |||||    
T  4422111 ccaggctcaggtctatcaaagcctggcctggcctggcctattcccaccccta 4422060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 8946295 - 8946362
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttca 84  Q
    ||||| || ||||||||||| | |  ||| |||||||||||  |||||||||||||||||||||||||    
T  8946295 atttataaatagataaaatggactaattaatgactttaatatgaagtaggcctgtaaatagactttca 8946362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 48659369 - 48659319
Alignment:
Q  135 aggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||  || ||||||||||||||||| ||| ||||||    
T  48659369 aggctcaggcctatcaaagcctagcctggcctggcctattcccacccctaa 48659319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 52225723 - 52225769
Alignment:
Q  138 ctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  52225723 ctcagacctatcaaagtctggcctgacctggcctattcccaacccta 52225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 24390815 - 24390880
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    ||||||||||||| ||||| |||| |||| |||||||||||   ||||||| ||||||||| ||||    
T  24390815 atttaaaagtagacaaaattaaatatttaatgactttaatatatagtaggcatgtaaataggcttt 24390880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 47691629 - 47691596
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcct 166  Q
    |||||||||||||||||||| |||||||||||||    
T  47691629 ccaggctcaggcctatcaaagtctggcctggcct 47691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 49389483 - 49389450
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcct 166  Q
    ||||||||||||||||||||| ||||||||||||    
T  49389483 ccaggctcaggcctatcaaaacctggcctggcct 49389450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 22608921 - 22608849
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| | | ||||  ||||| ||||  |||||||| |||||||||  ||||||||||    
T  22608921 atttaaaagtagataaaatggattatttaaggacttcaatatgaagtaggcttgtaaataggttttcaggtca 22608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 44523404 - 44523456
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcct 69  Q
    |||||||||||||||||||||| | |||| | |||||||||  ||||||||||    
T  44523404 atttaaaagtagataaaatgaactatttaataactttaatatgaagtaggcct 44523456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 48801310 - 48801357
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||     ||||||||||||||||| ||||||||||    
T  48801310 ccaggctcaggcctatcaaa-----gcctggcctggcctattcccaaccctaa 48801357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 17852677 - 17852806
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||| |||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||| |        ||||||    
T  17852677 atttaaaaatagataaaatggtatgtttagtaactttaagagtaagtaggcctgtaaatagactttcaggtcaggccagaccaggccaaaaaaataggcc 17852776  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    |||||||||||||| |||| ||||||||||    
T  17852777 tatgaaaggccatagaccaagctcaggcct 17852806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 29557630 - 29557550
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  29557630 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 29557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 43616497 - 43616417
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  43616497 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 43616417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 5936706 - 5936827
Alignment:
Q  21 aaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcctatg 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| |         ||||||||||    
T  5936706 aaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagaccaaa-----aaaataggcctatg 5936800  T
Q  121 aaaggccataaaccaggctcaggccta 147  Q
    ||||||||||  |||||||||||||||    
T  5936801 aaaggccataggccaggctcaggccta 5936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 34726234 - 34726312
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  34726234 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggtcaggccag 34726312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 18075690 - 18075770
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  18075690 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 18075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 38213611 - 38213531
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  38213611 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtagacctgtaaataggctttcaggtcaggccagac 38213531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 39133448 - 39133362
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagact 103  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||    
T  39133448 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttgcaggccatgccaggccagact 39133362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 13029037 - 13029161
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| || ||||| ||| |         ||||||    
T  13029037 atttaaaagtagataaaatggaatgtttagtgactttgatagtaagtaggcctgtaaataggctttcaggccaggccaggccaaa-----aaaataggcc 13029131  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  13029132 tatgaaaggccataggccaggctcaggcct 13029161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 12033734 - 12033803
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12033734 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 12033803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 21198045 - 21198110
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  21198045 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttt 21198110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 43999564 - 43999641
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagcca 94  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  43999564 atttaaaagtagataaaatggaatgtttagtgattttaatagcaagtaggcctgtaaataggctttcaggtcaggcca 43999641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 32084050 - 32084118
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcag 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  32084050 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtagacctgtaaataggctttcag 32084118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 36983194 - 36983272
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||| || |||||    
T  36983194 atttaaaagtagataaaatggaatgtttagtgactttaatagtaaataggcttgtaaataggctttcaggccaggccag 36983272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 27670666 - 27670725
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatag 77  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27670666 atttaaaagtag-taaaatggaatgtttagtgactttaatagtaagtaggcctgtaaatag 27670725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 34726398 - 34726450
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  34726398 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 34726450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 40737851 - 40737799
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  40737851 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 40737799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 12033897 - 12033948
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  12033897 ccaggctcaggcctatcaaagtctggcctggcctagcctattcccaacccta 12033948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 13029179 - 13029230
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  13029179 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 13029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 21198209 - 21198260
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  21198209 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 21198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 2995116 - 2995169
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2995116 ccaggctcaggcctatcaaagtctggtctggcctggcctattcccacccctaac 2995169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 2182792 - 2182844
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||    
T  2182792 ccaggctcaggcctatcaaagtctggcctgacctggcctattcccatccctaa 2182844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 29768341 - 29768289
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| ||||||    
T  29768341 ccaggctcaggcctatcaaagcctggcctggcctggcctattaccacccctaa 29768289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 36985453 - 36985505
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||||||||||    
T  36985453 ccaggctcaggcctatcaaagcctggtctggcctggcctattcccaaccctaa 36985505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 26260339 - 26260390
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||| ||||||||||| |||||||||    
T  26260339 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccaacccta 26260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 29044156 - 29044105
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  29044156 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 29044105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 38448105 - 38448156
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||||||||||  ||||||||    
T  38448105 ccaggctcaggcctatcaaagcctggcctggcctggcctattctcaacccta 38448156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 43616356 - 43616305
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||||||||    
T  43616356 ccaggctcaggcctatcaaagtctgacatggtctggcctatttccaacccta 43616305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 44092881 - 44092932
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  44092881 ccaggctcagacctatcaaaacctggcctggcctggcctattcccaccccta 44092932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 6420030 - 6420071
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  6420030 ccaggctcaggcctatcaaagtctggcctggcctgacctatt 6420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 17852823 - 17852871
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacc 181  Q
    |||| ||||||||||||||| |||| |||||||||||||||| ||||||    
T  17852823 ccagactcaggcctatcaaagtctgacctggcctggcctattcccaacc 17852871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 32084187 - 32084238
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| ||||||||||||||| |||| ||||||||||||||||  ||||||||    
T  32084187 ccagactcaggcctatcaaagtctgccctggcctggcctattctcaacccta 32084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 35959380 - 35959329
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||   ||||||||||||||||||| ||| |||||    
T  35959380 ccaggctcaggcctatcaaagcttggcctggcctggcctattcccaccccta 35959329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 31452960 - 31452996
Alignment:
Q  138 ctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  31452960 ctcaggcctatcaaagtctggcctgacctggcctatt 31452996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 40738025 - 40737993
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  40738025 atttaaaagtagataaaatggaatgtttagtga 40737993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 12077363 - 12077201
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||| ||||||||  | ||||| ||| |         ||||||    
T  12077363 atttaaaagtagataaaatggaatgattagtgactttaataataagtaggcctgtacataggctttcaggctaggccaggccaaa-----aaaataggcc 12077269  T
Q  117 tatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||| |||||||  |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  12077268 tatgaatggccataggccagacccaggcctatcaaagtctggcctggcctggcctattcccaacccta 12077201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 11410736 - 11410656
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  11410736 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 11410656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 2732505 - 2732436
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2732505 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 2732436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 14776114 - 14776238
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| |         ||||||    
T  14776114 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccaggccaaa-----aaaataggcc 14776208  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  14776209 tatgaaaggccataggccaggctcaggcct 14776238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 1411431 - 1411511
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  1411431 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 1411511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 3357148 - 3357029
Alignment:
Q  22 aaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcctatga 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| |         |||||||||||    
T  3357148 aaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccaggccaaa-----aaaataggcctatga 3357054  T
Q  122 aaggccataaaccaggctcaggcct 146  Q
    |||||||||  ||||||||||||||    
T  3357053 aaggccataggccaggctcaggcct 3357029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 32670256 - 32670336
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||    
T  32670256 atttaaaagtagataaaataaaatgtttagtgactttaatattaagtatgcctgtaaataggctttcaggtcaggccagac 32670336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 41399642 - 41399720
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  41399642 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 41399720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 37807173 - 37807104
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37807173 atttaaaagtaaataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 37807104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 4068069 - 4067989
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||| ||||||||||| |||||||    
T  4068069 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtatgtttgtaaataggctttcaggtcaggccagac 4067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 41892338 - 41892258
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||| || |||||||    
T  41892338 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgcaaataggctttcaggccaggccagac 41892258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 36820840 - 36820918
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||| || |||||    
T  36820840 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaataggcttttaggccaggccag 36820918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 18533273 - 18533342
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  18533273 atttaaaagtagataaaatggaatgtttagtgactttaatagtgagtagacctgtaaataggctttcagg 18533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 37807062 - 37806989
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  37807062 taggcctatgaaaggccataggccaggctcaggcctatcaaaatctggcctgacctggcctattctcaacccta 37806989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 8485822 - 8485886
Alignment:
Q  22 aaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8485822 aaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 8485886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 31673749 - 31673673
Alignment:
Q  21 aaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  31673749 aaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaataggttttcaggccaggccagac 31673673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 48214278 - 48214209
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||||    
T  48214278 atttaaaagtagataaaatggaatgattagtgactttaatagtaagcaggcctgtaaataggatttcagg 48214209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 34521165 - 34521215
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggc 67  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34521165 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggc 34521215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 41892174 - 41892122
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  41892174 ccaggctcaggcctatcaaagtctggcctggcctggcctattcccaaccctaa 41892122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 14776256 - 14776308
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  14776256 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 14776308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 2732341 - 2732290
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  2732341 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 2732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 3357011 - 3356960
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  3357011 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3356960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 11410572 - 11410521
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  11410572 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 11410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 15943192 - 15943243
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  15943192 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 15943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 2941203 - 2941253
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  2941203 caggctcaggcctatcaaagtctggcctggcctggcctattcccaccccta 2941253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 10227909 - 10227868
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10227909 ccaggctcaggcctatcaaagtctggcctggcctggcctatt 10227868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 1411599 - 1411647
Alignment:
Q  137 gctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  1411599 gctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1411647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 34521318 - 34521370
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||||||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  34521318 caggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaac 34521370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 35516412 - 35516495
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccag 100  Q
    ||||| ||||| | |||||  ||| |||| |||||||||||  |||||||||||||||||| |||||||| || ||||||||||    
T  35516412 atttagaagtatacaaaattgaatatttaatgactttaatataaagtaggcctgtaaataggctttcaggccaggccagaccag 35516495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 36820930 - 36820993
Alignment:
Q  123 aggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    ||||||||  ||| ||||||||||||||||  |||| ||||||||||||||| |||||||||||    
T  36820930 aggccataggccaagctcaggcctatcaaagcctggtctggcctggcctattcccaaccctaac 36820993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 12419226 - 12419267
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  12419226 ccaggctcaggcctatcaaagcctggcctggcctggcctatt 12419267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 13391105 - 13391064
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  13391105 ccaggctcaggcctatcaaagcctggcctggcctggcctatt 13391064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 43596252 - 43596297
Alignment:
Q  137 gctcaggcctatcaaaatctggcctggcctggcctatttccaaccc 182  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||    
T  43596252 gctcaggcctatcaaagcctggcctggcctggcctattcccaaccc 43596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 21806551 - 21806500
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||| |||||    
T  21806551 ccaggctcaggcctatcaaagcctggtctggcctggcctattcccaccccta 21806500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 23671227 - 23671270
Alignment:
Q  141 aggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||    
T  23671227 aggcctatcaaagtctggcctggcctggcctattcccaccccta 23671270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 31377416 - 31377365
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||| ||||||||||||||  |||||||||||||||||||| ||| |||||    
T  31377416 ccaggttcaggcctatcaaagcctggcctggcctggcctattcccaccccta 31377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 41399784 - 41399834
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  | |||||||||||||||||| |||||||||    
T  41399784 ccaggctcaggcctatcaaagcc-ggcctggcctggcctattcccaacccta 41399834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 41902911 - 41902962
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||||||||| |||||  |||||||||||||| ||| |||||    
T  41902911 ccaggctcaggcctatcaaagtctggtatggcctggcctattcccatcccta 41902962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 44848067 - 44848016
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||| |||||||  |||||||||||||||||||| ||| |||||    
T  44848067 ccaggctcaggcttatcaaagcctggcctggcctggcctattcccaccccta 44848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 2196089 - 2196043
Alignment:
Q  139 tcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||| ||||| |||||||| |||||| ||||||||||    
T  2196089 tcaggcctatcaaagtctggtctggcctgacctattcccaaccctaa 2196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 25076882 - 25076947
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||||| | |||| |||||||||||  || ||||| ||||  ||||||||    
T  25076882 atttaaaagtagataaaatgaattatttaatgactttaatataaattaggcttgtacgtagacttt 25076947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 15943018 - 15943050
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  15943018 atttaaaagtagataaaatggaatgtttagtga 15943050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 19421155 - 19421031
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| | |       ||||||    
T  19421155 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccaggccaaaat-----aataggcc 19421061  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  19421060 tatgaaaggccataggccaggctcaggcct 19421031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 29077057 - 29076933
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| | |       ||||||    
T  29077057 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccaggccaaaat-----aataggcc 29076963  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  29076962 tatgaaaggccataggccaggctcaggcct 29076933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 41873597 - 41873528
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41873597 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 41873528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 20647706 - 20647786
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  20647706 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaatagactttcaggccaggccagac 20647786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 40488956 - 40489036
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  40488956 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 40489036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 34636530 - 34636406
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagaccagactnnnnnnntaggcc 116  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||| || ||||||||| |         ||||||    
T  34636530 atttaaaagtagataaaatggaatgtttgatgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagaccaaa-----aaaataggcc 34636436  T
Q  117 tatgaaaggccataaaccaggctcaggcct 146  Q
    ||||||||||||||  ||||||||||||||    
T  34636435 tatgaaaggccataggccaggctcaggcct 34636406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 39171351 - 39171420
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39171351 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 39171420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 46068201 - 46068132
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46068201 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 46068132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 47844715 - 47844646
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47844715 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 47844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 54650656 - 54650587
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54650656 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 54650587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 33069345 - 33069425
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| || |||||||    
T  33069345 atttaaaagtagataaaatggaatgtttagtgactttaatagtaaggaggcctgtaaataggctttcaggccaggccagac 33069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 34422577 - 34422657
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  34422577 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggcctgtaaataggctttcaggccaggccagac 34422657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 39391265 - 39391197
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcag 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  39391265 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcag 39391197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 1782595 - 1782673
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  1782595 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 1782673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 33249627 - 33249549
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  33249627 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 33249549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 52174716 - 52174794
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  52174716 atttaaaagtagctaaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 52174794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 13596349 - 13596280
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13596349 atttaaaagtagataaaatggaatgtttagtaactttaatagtaagtaggcctgtaaataggctttcagg 13596280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 24540914 - 24540983
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  24540914 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtgaataggctttcagg 24540983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 25537051 - 25536982
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  25537051 atttaaaagtagataaaatggaatgtttagtgactttaataataagtaggcctgtaaataggctttcagg 25536982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 28793863 - 28793794
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  28793863 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctataaataggctttcagg 28793794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 40000444 - 40000513
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40000444 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 40000513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 40000690 - 40000759
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40000690 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 40000759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 53002356 - 53002287
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  53002356 atttaaaagtagataaaatgaaatatttagtgactttaatagtaagtaggcatgtaaataggctttcagg 53002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 55008306 - 55008237
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55008306 atttaaaagtagataaaatagaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcagg 55008237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 33370603 - 33370525
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||| || |||||    
T  33370603 atttaaaagtagataaaatggaatgtttaatgactttaatagtaagtaggtctgtaaataggctttcaggccaggccag 33370525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 47596995 - 47597064
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  47596995 atttaaaagtagataaaatcgaatgtttagtgactttaatagtaagtaggcctgtaattaggctttcagg 47597064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 46116632 - 46116560
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||  ||||||||| |||||||||||    
T  46116632 atttagaagtagataaaatgaaatgtttaatgactttaataataagtaggtatgtaaataggctttcaggtca 46116560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 33069498 - 33069550
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  33069498 ccaggctcaggcctatcaaagtctggcctggcctggcctattcccaaccctaa 33069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 18984154 - 18984212
Alignment:
Q  28 gataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcagg 86  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  18984154 gataaaatggaatgtttagggactttaatagtaagtaggtctgtaaataggctttcagg 18984212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 1782759 - 1782811
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  1782759 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1782811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 9338335 - 9338387
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  9338335 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 9338387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 34705384 - 34705436
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  34705384 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 34705436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 39391101 - 39391049
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  39391101 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 39391049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 40000854 - 40000906
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  40000854 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 40000906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 13596212 - 13596161
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  13596212 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 13596161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 19421013 - 19420962
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  19421013 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 19420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 20647870 - 20647921
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  20647870 ccaggctcaggcctatcaaagcctggcctggcctgacctatttccaacccta 20647921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 28793699 - 28793648
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  28793699 ccaggctcaggcctatcaaagcctggcctggcctgacctatttccaacccta 28793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 29076915 - 29076864
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  29076915 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 29076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 25537148 - 25537108
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaata 57  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  25537148 atttaaaagtagataaaatggaatgtttagtgactttaata 25537108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 26994834 - 26994886
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||| ||||||    
T  26994834 ccaggctcaggcctatcaaagtctggcctggtctggcctattcccacccctaa 26994886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 4357097 - 4357148
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  4357097 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaccccta 4357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 4481700 - 4481649
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||||| |||||  |||||||||||||||||||| |||||||||    
T  4481700 ccaggctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 4481649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 24541051 - 24541102
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||| ||||||||| |||||||||    
T  24541051 ccaggctcaggcctatcaaagcctggcctggcttggcctattcccaacccta 24541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 33249463 - 33249412
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||| |||||||||||||| |||||||||    
T  33249463 ccaggctcaggcctatcaaagcctggcttggcctggcctattcccaacccta 33249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 47597159 - 47597210
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||| ||||||||||||||| |||||||||    
T  47597159 ccaggctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 47597210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 41636334 - 41636282
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||| ||||||    
T  41636334 ccagactcaggcctatcaaagcctggcctggcctggcctattcccacccctaa 41636282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 51302412 - 51302361
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  ||||||| |||||||||||| ||| |||||    
T  51302412 ccaggctcaggcctatcaaagcctggcctagcctggcctattcccaccccta 51302361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 54447632 - 54447581
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||| ||||||||| ||| |||||    
T  54447632 ccaggctcaggcctatcaaagcctggcctggcttggcctattcccaccccta 54447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 33910198 - 33910156
Alignment:
Q  142 ggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||||||||||  |||||||||||||||||||| |||||||||    
T  33910198 ggcctatcaaagcctggcctggcctggcctattcccaacccta 33910156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 46181778 - 46181827
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggc 67  Q
    ||||||||||||||||| || ||||||||||||| |||||||||| |||||    
T  46181778 atttaaaagtagataaa-tggaatgtttagtgacattaatagtaaataggc 46181827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 13596265 - 13596232
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggc 144  Q
    |||||||||||||||||||| |||||||||||||    
T  13596265 taggcctatgaaaggccatataccaggctcaggc 13596232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 43010309 - 43010362
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||||||||| ||||||||| ||| |||||  |||||||||| |||||||||||    
T  43010309 ccaggctcagacctatcaaagtctagcctgatctggcctattcccaaccctaac 43010362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 14751854 - 14751814
Alignment:
Q  134 caggctcaggcctatcaaaatctggcctggcctggcctatt 174  Q
    |||||||||||||||| ||| |||||||| |||||||||||    
T  14751854 caggctcaggcctatctaaacctggcctgacctggcctatt 14751814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 34705210 - 34705242
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtga 49  Q
    |||||||||||||||||||| ||||||||||||    
T  34705210 atttaaaagtagataaaatggaatgtttagtga 34705242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1404 - 1325
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccaga 96  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  1404 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccaga 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 15782 - 15704
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  15782 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 15704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 15379 - 15339
Alignment:
Q  144 cctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  15379 cctatcaaagtctggcctggcctagcctattcccaacccta 15339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 81249 - 81327
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  81249 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 81327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 81413 - 81464
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||| ||||||||||  |||||||||||||||||||| |||||||||    
T  81413 ccaggctcaagcctatcaaagcctggcctggcctggcctattcccaacccta 81464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24992 - 24920
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  24992 atttaaaagtagataaaatggaatgtttagtggctttaatagtaagtaggcctgtaaataggctttcaggtca 24920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 24881 - 24806
Alignment:
Q  111 taggcctatgaaaggccataaaccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaac 186  Q
    |||| |||||||||||||||  |||||||||||| |||||||  ||||| ||| |||||||||| |||||||||||    
T  24881 taggtctatgaaaggccataggccaggctcaggcttatcaaagcctggcttggtctggcctattcccaaccctaac 24806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 218181 - 218261
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccagac 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| || |||||||    
T  218181 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaaataagcctgtaaataggctttcaggccaggccagac 218261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 41114 - 41037
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtcaagccag 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  41114 atttaaaagtagataaaatgaa-tgtttagtgactttaatagtaagtaggcctgtaaataggctttcaggccaggccag 41037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 40951 - 40900
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  40951 ccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 40900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 40190 - 40125
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagacttt 82  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  40190 atttaaaagtagataaaatggaatgtttagtgactttaatagtaagtaggcctgtaaataggcttt 40125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 14249 - 14321
Alignment:
Q  17 atttaaaagtagataaaatgaaatgtttagtgactttaatagtaagtaggcctgtaaatagactttcaggtca 89  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  14249 atttaaaagtagataaaatggaatgtttagagactttaatagtaagtaggcctgtaattaggctttcaggtca 14321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 14412 - 14463
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    |||| |||||||||||||||  |||||||| ||||||||||| |||||||||    
T  14412 ccagactcaggcctatcaaagcctggcctgacctggcctattcccaacccta 14463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 10689 - 10637
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaaccctaa 185  Q
    ||||||||||||||||||||  |||||||| ||||||||||| ||| ||||||    
T  10689 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccacccctaa 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1702 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1702
Description:

Target: scaffold1702; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 2 - 53
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||||||| ||||||||||| ||| |||||    
T  2 ccaggctcaggcctatcaaagcctggcctgacctggcctattcccaccccta 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 9202 - 9151
Alignment:
Q  133 ccaggctcaggcctatcaaaatctggcctggcctggcctatttccaacccta 184  Q
    ||||||||||||||||||||  |||| ||||||||||||||| ||| |||||    
T  9202 ccaggctcaggcctatcaaagcctggtctggcctggcctattcccaccccta 9151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University