View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15744_low_17 (Length: 310)
Name: NF15744_low_17
Description: NF15744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15744_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 293
Target Start/End: Original strand, 40076523 - 40076809
Alignment:
| Q |
7 |
acatcatcatacgccacccatcaaaaaatcacccttaaaatagcattcatattcccaagagttcacaaacattcatacaattcacccatggcaaccaaat |
106 |
Q |
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| T |
40076523 |
acatcttcatacgccacccataaaaaaataacccttaaaatagcattcatattcccaagagttcacaaacattcatacaattcacccatggcacccaaat |
40076622 |
T |
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| Q |
107 |
ttggttccaaaaacaaatcctcttcatggctctcaagcggttgcatcttcatcctaggtgcaatgtcagctcttctttttatctggggcctctcctcctt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
40076623 |
ttggttccaaaaacaaatcctcttcatggctctcaagcggttgcatcttcatcctaggtgcaatggcagctcttctttttatctggggcctctcctcctt |
40076722 |
T |
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| Q |
207 |
catcactccaatctcaaacaccaaccccaaattcaactccatcaccaccaaactcaaatcctttaacttcaccacaaacaccgactt |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40076723 |
catcactccaatctcaaacaccaaccccaaattcaactccatcaccaccaaactcaaatcctttaacttcaccacaaacaccgactt |
40076809 |
T |
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