View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15744_low_18 (Length: 309)

Name: NF15744_low_18
Description: NF15744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15744_low_18
NF15744_low_18
[»] chr4 (15 HSPs)
chr4 (27-160)||(44830971-44831101)
chr4 (202-299)||(44830856-44830953)
chr4 (24-205)||(1464074-1464254)
chr4 (24-206)||(3169132-3169313)
chr4 (239-295)||(41814486-41814540)
chr4 (115-194)||(53996238-53996317)
chr4 (113-194)||(4127558-4127640)
chr4 (113-211)||(50398659-50398757)
chr4 (111-211)||(1645868-1645968)
chr4 (113-185)||(13614018-13614090)
chr4 (63-184)||(51331350-51331473)
chr4 (113-199)||(21067215-21067301)
chr4 (24-194)||(21220364-21220533)
chr4 (113-212)||(31817519-31817618)
chr4 (113-211)||(12692120-12692218)
[»] chr1 (16 HSPs)
chr1 (24-191)||(43057562-43057728)
chr1 (113-193)||(10820531-10820611)
chr1 (113-194)||(50003202-50003283)
chr1 (113-211)||(16452060-16452158)
chr1 (113-211)||(16461213-16461311)
chr1 (24-211)||(43057104-43057289)
chr1 (115-211)||(20845790-20845886)
chr1 (113-211)||(20054207-20054305)
chr1 (113-211)||(20054663-20054761)
chr1 (113-211)||(20055119-20055217)
chr1 (113-211)||(20055575-20055673)
chr1 (113-211)||(20056031-20056129)
chr1 (113-211)||(20056487-20056585)
chr1 (113-211)||(20056934-20057032)
chr1 (113-211)||(20057390-20057488)
chr1 (113-211)||(52250127-52250225)
[»] chr5 (7 HSPs)
chr5 (113-211)||(15513140-15513238)
chr5 (113-200)||(17445582-17445669)
chr5 (24-194)||(39146877-39147046)
chr5 (24-211)||(2193737-2193923)
chr5 (115-206)||(18304357-18304448)
chr5 (113-191)||(20039601-20039679)
chr5 (113-211)||(34371533-34371631)
[»] chr6 (10 HSPs)
chr6 (24-211)||(20896727-20896913)
chr6 (24-211)||(23986356-23986542)
chr6 (113-194)||(3652917-3652998)
chr6 (112-205)||(11062213-11062306)
chr6 (24-211)||(20126221-20126407)
chr6 (115-194)||(6331041-6331120)
chr6 (113-194)||(3652424-3652505)
chr6 (113-194)||(20850259-20850340)
chr6 (63-137)||(31821767-31821843)
chr6 (113-193)||(17850857-17850937)
[»] chr2 (9 HSPs)
chr2 (24-159)||(11388162-11388294)
chr2 (24-194)||(18098917-18099086)
chr2 (113-211)||(29804603-29804701)
chr2 (117-194)||(18448049-18448126)
chr2 (24-211)||(33174879-33175065)
chr2 (112-194)||(1706980-1707062)
chr2 (113-205)||(33174432-33174524)
chr2 (113-211)||(25434183-25434281)
chr2 (113-211)||(27883053-27883151)
[»] chr8 (9 HSPs)
chr8 (24-191)||(2043999-2044165)
chr8 (113-211)||(27022465-27022563)
chr8 (24-194)||(6464949-6465118)
chr8 (113-194)||(22026317-22026398)
chr8 (114-194)||(22840657-22840737)
chr8 (113-211)||(10844804-10844902)
chr8 (113-211)||(22549122-22549220)
chr8 (113-211)||(27925820-27925918)
chr8 (113-211)||(28453260-28453357)
[»] chr3 (7 HSPs)
chr3 (114-194)||(39640875-39640955)
chr3 (113-211)||(16810846-16810944)
chr3 (113-194)||(16811319-16811400)
chr3 (113-211)||(39653085-39653183)
chr3 (113-206)||(2911021-2911114)
chr3 (113-194)||(32797062-32797142)
chr3 (113-194)||(37044973-37045054)
[»] chr7 (7 HSPs)
chr7 (113-211)||(26957684-26957782)
chr7 (113-185)||(9623155-9623227)
chr7 (113-211)||(34405718-34405816)
chr7 (113-194)||(2611779-2611860)
chr7 (113-211)||(35527248-35527345)
chr7 (113-194)||(2189082-2189163)
chr7 (145-194)||(6747757-6747806)
[»] scaffold0168 (1 HSPs)
scaffold0168 (113-211)||(2663-2761)
[»] scaffold0243 (1 HSPs)
scaffold0243 (115-211)||(1141-1237)
[»] scaffold0557 (1 HSPs)
scaffold0557 (113-183)||(699-769)
[»] scaffold0442 (1 HSPs)
scaffold0442 (113-194)||(2443-2524)
[»] scaffold0333 (1 HSPs)
scaffold0333 (113-194)||(4954-5035)
[»] scaffold0047 (1 HSPs)
scaffold0047 (122-194)||(17815-17887)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 44831101 - 44830971
Alignment:
Q  27 catcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgatttcctctcatttcgat 126  Q
    |||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  44831101 catcttgttagtttaggtagtaccaaacaatttttat---aagcttcccttcaaccatgtaatctcatacttacgtggcatgagttcctctcattccgat 44831005  T
Q  127 gtgattcggttcatttaaaagttgtcgggaaccg 160  Q
    |||||||||||||| |||||||||||| ||||||    
T  44831004 gtgattcggttcatctaaaagttgtcgagaaccg 44830971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 44830953 - 44830856
Alignment:
Q  202 tcgtcggcctcaagtgtaacactttccaatcttgctgcatcatcactagttttatgtttttgacaaattgaatgatttatattgcactaaaaacttaa 299  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44830953 tcgtcggcctcaagtgcaacactttccaatcttgctgcatcatcactagttttatgtttttgacaaattgaatgatttatattgcactaaaaacttaa 44830856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 1464254 - 1464074
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttac---gtggcatgatttcctctcat 120  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   ||| || | |||||| ||||| |||||||| |||   || |||||||  ||||||||    
T  1464254 atgcatcttgttgatataggtagtaccaaacaattcttat---aagttttctttcaactatgtattctcatacctacacggtcgcatgatc-cctctcat 1464159  T
Q  121 ttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgt 205  Q
    |  ||||||||||||||| | |||||| |||||  | ||||||||| ||||||||| |||||||| |||||||| ||||||||||    
T  1464158 tctgatgtgattcggttcgtctaaaaggtgtcgaaagccgttcattgtcatgtcttatgcaccggcgaccactctccgtcttcgt 1464074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 206
Target Start/End: Complemental strand, 3169313 - 3169132
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||||||||   |||  | |||||||||||||| || ||||| |||  ||| | ||  |||||||||||    
T  3169313 atgcatcttgttgatataggtagtaccaaacaatttttat---aagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcatt 3169217  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtc 206  Q
     |||||||||||||||| | || ||| |||| |||  || ||||| || ||||||||||||||| |||||||| ||||| |||||    
T  3169216 ccgatgtgattcggttcctctataagctgtcaggagtcgctcattgtcgtgtcttgtgcaccggtgaccactccccgtcctcgtc 3169132  T

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Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 41814486 - 41814540
Alignment:
Q  239 catcatcactagttttatgtttttgacaaattgaatgatttatattgcactaaaaac 295  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41814486 catcatcactagtttt--gtttttgacaaattgaatgatttatattgcactaaaaac 41814540  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 194
Target Start/End: Original strand, 53996238 - 53996317
Alignment:
Q  115 tctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||| |||||||||||||||| | |||||||||| |||| ||| ||||| || || |||||||||||| ||||||||    
T  53996238 tctcattccgatgtgattcggttcctctaaaagttgttgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 53996317  T

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Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 4127558 - 4127640
Alignment:
Q  113 cctctcatttcgatgtgattcggttcat-ttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| |||||||||||||||| | ||| |||||||||||| ||| ||||| || || |||||||||||| ||||||||    
T  4127558 cctctcattccgatgtgattcggttcctcttagaagttgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 4127640  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 50398659 - 50398757
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| ||||||||||||| |  | || |||||||||||| ||| ||||| ||||| |||||||||||| |||||||| ||| | ||||| ||||    
T  50398659 cctctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagcct 50398757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 1645868 - 1645968
Alignment:
Q  111 ttcctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcc 210  Q
    ||||||||||| |||||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| |||    
T  1645868 ttcctctcattccgatgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcc 1645967  T
Q  211 t 211  Q
    |    
T  1645968 t 1645968  T

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Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 13614018 - 13614090
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccgg 185  Q
    ||||||||| |  |||||||||||| || ||||||||||| || |||  ||||||||||||||||||||||||    
T  13614018 cctctcattccattgtgattcggtttatctaaaagttgtcaggtaccactcattatcatgtcttgtgcaccgg 13614090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 51331350 - 51331473
Alignment:
Q  63 ttataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccg 160  Q
    |||||||| | |||||||||||||| || ||||| |||  ||| | ||  ||||||||||| ||||||||||||| |  | || ||||| | ||||||||    
T  51331350 ttataagccttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggcttgtctagaagttatagggaaccg 51331449  T
Q  161 ttcattatcatgtcttgtgcaccg 184  Q
     ||||||||||| |||||||||||    
T  51331450 ctcattatcatgccttgtgcaccg 51331473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 21067301 - 21067215
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgt 199  Q
    ||||||||| || ||||||||| ||| | || |||||||||||| ||| |||||||| || |||||||| ||| |||||||| ||||    
T  21067301 cctctcattccggtgtgattcgattcgtctataagttgtcgggagccgctcattatcgtgccttgtgcatcggcgaccactctccgt 21067215  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 21220364 - 21220533
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| | ||||||||||| || | |||||| ||| |||| | ||  | |||||||||    
T  21220364 atgcatcttgttgatataggtagtaccaaacaattcttat---aagcattccttcaaccatatagtttcatacctacatggcctcatgatccctctcatt 21220460  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
      ||||||||||||||| | || ||| || ||||| ||| ||||| || || |||||||||| | ||||||||    
T  21220461 ctgatgtgattcggttcctctagaagctgccgggagccgctcattgtcgtgccttgtgcaccagtgaccactc 21220533  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 31817519 - 31817618
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcctc 212  Q
    ||||| |||||||||||||||   |  | ||||| ||||||||||||| ||||| ||||| ||||||||| || |||||||| ||| | ||||| |||||    
T  31817519 cctcttatttcgatgtgattctccttgtctaaaaattgtcgggaaccgctcattgtcatgccttgtgcactggtgaccactccccggcctcgtcagcctc 31817618  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 12692120 - 12692218
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  12692120 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 12692218  T

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Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 43057562 - 43057728
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||| | ||||||||| ||||||||| ||||   |||| | |||||||||||||| |||||||| |||  ||| | |   | |||||||||    
T  43057562 atgcatcttgttaatataggtagtaccaaacaattcttat---aagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatt 43057658  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagacca 191  Q
     |||||||||||||||| | |||||| |||||||| ||| |||||  |||| |||||||||||| |||||    
T  43057659 ccgatgtgattcggttcctctaaaagctgtcgggagccgctcattggcatgccttgtgcaccggcgacca 43057728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 10820611 - 10820531
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccact 193  Q
    ||||||| | |||||||||||||||||| || |||||||||| | ||||||||| |||||  ||||||||||| |||||||    
T  10820611 cctctcactccgatgtgattcggttcatctagaagttgtcggtagccgttcattgtcatgctttgtgcaccggcgaccact 10820531  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 50003202 - 50003283
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| |||||||||||||||| |||| ||| |||||||| |||  |||||||||| ||| |||||||  ||||||||    
T  50003202 cctctcattccgatgtgattcggttcctttagaagctgtcgggagccgcacattatcatgccttttgcaccgacgaccactc 50003283  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16452060 - 16452158
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||| ||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  16452060 cctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 16452158  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 16461213 - 16461311
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||| ||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  16461213 cctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 16461311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 43057104 - 43057289
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgatt-tcctctcattt 122  Q
    ||||||||||||  | ||||||||||||||||||| || |   |||| | |||||||||||||| || ||||| |||  ||| | |   ||| ||||||     
T  43057104 atgcatcttgttgatataggtagtatcaaacaattcttct---aagccttccttcaaccatgtagtcacatacctacacggccttaggatcccctcattc 43057200  T
Q  123 cgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     ||||||||||||||| | || || |||||||||  || ||||| ||||| ||||||||||||  ||||||| ||||| ||||| ||||    
T  43057201 tgatgtgattcggttcctctagaaattgtcgggagtcgctcattgtcatgccttgtgcaccggcaaccactccccgtcctcgtcagcct 43057289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 20845790 - 20845886
Alignment:
Q  115 tctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||||| ||||| ||||    
T  20845790 tctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 20845886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20054207 - 20054305
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20054207 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20054663 - 20054761
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20054663 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20054761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20055119 - 20055217
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20055119 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20055217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20055575 - 20055673
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20055575 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20055673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20056031 - 20056129
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20056031 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20056487 - 20056585
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20056487 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20056585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20056934 - 20057032
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20056934 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20057032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 20057390 - 20057488
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  20057390 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 20057488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 52250225 - 52250127
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||| ||| ||| | ||||| ||||    
T  52250225 cctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccgctccccgccctcgtcagcct 52250127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 15513140 - 15513238
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||||||| | |||||  |||||||| ||| |||||||| || |||||||||||| |||||||| ||||| ||||| ||||    
T  15513140 cctctcattccgatgtgattcggttcctctaaaaactgtcgggagccgctcattatcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 15513238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 17445582 - 17445669
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtc 200  Q
    |||||||||||||||||||||||||| | || ||||||| |||| ||| |||||  |||| |||||||||||  |||||||| |||||    
T  17445582 cctctcatttcgatgtgattcggttcctctagaagttgttgggagccgctcattgccatgccttgtgcaccgtcgaccactccccgtc 17445669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 39147046 - 39146877
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||| | || |||||||||||||||| ||||   |||  | |||||||||||||| || ||||| |||  ||| | ||  | |||||||||    
T  39147046 atgcatcttgttaatataagtagtatcaaacaattcttat---aagtctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatt 39146950  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||||||| |||| | || |||||||| ||| ||| ||||| || || |||||||||||| || |||||    
T  39146949 tcgatgtgattcagttcctctagaagttgtcaggagccgctcattgtcgtgccttgtgcaccggcgatcactc 39146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 2193923 - 2193737
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| | ||||||| ||||   |||| | |||||||||||||| || ||||| |||  ||| | ||  | |||||||||    
T  2193923 atgcatcttgttgatataggtagtacccaacaattcttat---aagccttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcatt 2193827  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     ||  |||||||||||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  2193826 ccggcgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 2193737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 18304448 - 18304357
Alignment:
Q  115 tctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtc 206  Q
    ||||||| || ||||||| ||||| | || ||| |||||||| ||| ||||| || ||||||||||||||| || ||||| ||||| |||||    
T  18304448 tctcattccgttgtgatttggttcgtctagaagctgtcgggagccgctcattgtcgtgtcttgtgcaccggcgatcactccccgtcctcgtc 18304357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 20039601 - 20039679
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagacca 191  Q
    ||||||||| |||||||||||||||  | || ||| |||||||| | | ||||| ||||| |||||||||||| |||||    
T  20039601 cctctcattccgatgtgattcggtttgtctagaagctgtcgggagctgctcattgtcatgccttgtgcaccggcgacca 20039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 34371631 - 34371533
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  34371631 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 34371533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 20896727 - 20896913
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| | |||||||||||||| |||||||| |||  ||| | |   | |||||||||    
T  20896727 atgcatcttgttgatataggtagtaccaaacaattcttat---aagccttccttcaaccatgtagtctcatacctacacggcctaaggatccctctcatt 20896823  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     ||||||||||||| |  | || |||||||||||| ||| ||||| ||||| |||||||| ||| |||||||| ||||| ||||| ||||    
T  20896824 ccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaacggcgaccactctccgtcctcgtcagcct 20896913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 23986356 - 23986542
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcat--gatttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| | |||||||||||||| || ||||| |||  ||| |  |  | |||||||||    
T  23986356 atgcatcttgttcatataggtagtaccaaacaattcttat---aagcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctcatt 23986452  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     |||||||||||||||| | || ||| |||||||| ||| ||||| ||||| |||||||||||  |||||||| ||| | ||||| ||||    
T  23986453 ccgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcatgccttgtgcaccgacgaccactccccgccctcgtcagcct 23986542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 3652998 - 3652917
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| |||||||| ||||||||| || ||| |||||||| ||| ||||| || || |||||||||||| ||||||||    
T  3652998 cctctcattccgatgtgagtcggttcatctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 3652917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 11062306 - 11062213
Alignment:
Q  112 tcctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgt 205  Q
    ||||||||| ||||||||||||||||| | || ||  |||||||| ||| ||||| || || |||||||||||| |||||||| ||| ||||||    
T  11062306 tcctctcatgtcgatgtgattcggttcctctagaaactgtcgggagccgctcattgtcgtgccttgtgcaccggtgaccactccccgccttcgt 11062213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 20126221 - 20126407
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||||||||| ||| ||||   |||| | |||||||||||||| |||||||| |||   || | |   | |||||||||    
T  20126221 atgcatcttgttgatataggtagtatcaaaccattcttat---aagccttccttcaaccatgtagtctcatacctacacagccttaggatccctctcatt 20126317  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     ||||||||||| | |  | || |||||||| ||| ||| ||||| ||||| |||||||||||| |||||||| ||| | ||||||||||    
T  20126318 ccgatgtgattcagcttgtctagaagttgtcaggagccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcggcct 20126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 194
Target Start/End: Original strand, 6331041 - 6331120
Alignment:
Q  115 tctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||| ||||||||||||| |  | || |||||||||||| ||| ||||| ||||| |||||||||||| ||||||||    
T  6331041 tctcattccgatgtgattcggcttgtctagaagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactc 6331120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 3652505 - 3652424
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| |||||||||||||||| | || ||| |||||||| ||| ||||| || || |||||||||||  ||||||||    
T  3652505 cctctcattccgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccactc 3652424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 20850340 - 20850259
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| ||||||||    
T  20850340 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactc 20850259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 31821767 - 31821843
Alignment:
Q  63 ttataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatttcgatgtgattcggtt 137  Q
    |||||||| | |||||||||||||| |||||||| ||| |||| | ||  | ||||||||| |||||||||||||||    
T  31821767 ttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctctcattccgatgtgattcggtt 31821843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 193
Target Start/End: Complemental strand, 17850937 - 17850857
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccact 193  Q
    ||||||||| || ||||||||||||| | || |||||||||| | ||| | ||| || || |||||||||||| |||||||    
T  17850937 cctctcattccggtgtgattcggttcgtctagaagttgtcggaagccgctaattgtcgtgccttgtgcaccggcgaccact 17850857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 11388294 - 11388162
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgatt-tcctctcattt 122  Q
    ||||||||||||  | ||||||||| ||||||||||||    ||||| | |||||||||||||| |||||||| |||  ||||| |   ||||||||||     
T  11388294 atgcatcttgttgatataggtagtaccaaacaattttt----taagcattccttcaaccatgtagtctcatacctacacggcatcaggatcctctcattc 11388199  T
Q  123 cgatgtgattcggttcatttaaaagttgtcgggaacc 159  Q
    |||||||||||||||| | ||||||||||||| ||||    
T  11388198 cgatgtgattcggttcctctaaaagttgtcggcaacc 11388162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 18098917 - 18099086
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| |||||||||||||||| |||||||| |||  ||| | |   |||||||||||    
T  18098917 atgcatcttgttgatataggtagtaccaaacaattcttat---aagcatcccttcaaccatgtagtctcatacctacacggcctcaggattcctctcatt 18099013  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
     |||||||||||||||| | || ||| |||||||| | | ||||| || || |||||||||||| || |||||    
T  18099014 ccgatgtgattcggttcctctataagctgtcgggagctgctcattgtcgtgccttgtgcaccggcgatcactc 18099086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 29804701 - 29804603
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||| ||| | || ||| |||||||| ||| |||||||| || |||||||||||| |||||||| ||||| ||||| ||||    
T  29804701 cctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattatcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 29804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 18448049 - 18448126
Alignment:
Q  117 tcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||| |||||||||||||||| | |||||| |||||||||||| ||||| || || |||||||||||| ||||||||    
T  18448049 tcattccgatgtgattcggttcctctaaaagctgtcgggaaccgctcattgtcgtgccttgtgcaccggcgaccactc 18448126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 33175065 - 33174879
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| | |||||||||||||| || ||||| |||  ||| | |   | |||||||||    
T  33175065 atgcatcttgttgatataggtagtaccaaacaattcttat---aagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatt 33174969  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
     ||||||||||||| |  | || |||||||||||| ||  ||||| ||||| |||||||||||| |||||||| ||| | ||||| ||||    
T  33174968 ccgatgtgattcggcttgtctagaagttgtcgggagccactcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagcct 33174879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 1707062 - 1706980
Alignment:
Q  112 tcctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||||| |||||||||||||||| | || || ||||||||| ||| ||||| || || |||||||||||  ||||||||    
T  1707062 tcctctcattccgatgtgattcggttcctctagaaattgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccactc 1706980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 33174524 - 33174432
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgt 205  Q
    ||||||||| |||||||||||||||| | || ||| |||||||| ||| ||||| ||||| |   |||||||| |||||||| ||| ||||||    
T  33174524 cctctcattccgatgtgattcggttcgtctagaagctgtcgggagccgctcattgtcatgccccttgcaccggcgaccactccccgccttcgt 33174432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 25434183 - 25434281
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| |||| ||| |||| ||| ||| ||||| || || |||||||||||| | |||||| ||| | ||||| ||||    
T  25434183 cctctcattccggtgtgattcggttcgtttagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcggccactccccgccctcgtcagcct 25434281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 27883053 - 27883151
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    |||||||||||| ||||||||||| | | || ||  || ||||| ||| ||||| || || |||||||||||| |||||||| ||||| ||||| ||||    
T  27883053 cctctcatttcggtgtgattcggtacgtgtagaatctgacgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 27883151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 2044165 - 2043999
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||||||||||||| ||||   |||| | |||||||||||||| |||||||| |||   || | |   | |||||||||    
T  2044165 atgcatcttgttgatataggtagtatcaaacaattcttat---aagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctctcatt 2044069  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagacca 191  Q
     ||||||||||| |||| | || |||||||||| | ||||| |||||| ||| ||||||||||| |||||    
T  2044068 ccgatgtgattctgttcctctagaagttgtcggaagccgttaattatcgtgttttgtgcaccggcgacca 2043999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 27022465 - 27022563
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| ||||||||||||| || | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||||| ||||| ||||    
T  27022465 cctctcattccgatgtgattcggctcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 27022563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 6464949 - 6465118
Alignment:
Q  24 atgcatcttgttagtttaggtagtatcaaacaatttttattataagcttcccttcaaccatgtaatctcatacttacgtggcatgat--ttcctctcatt 121  Q
    ||||||||||||  | ||||||||| ||||||||| ||||   |||| | |||||||||||||| |  ||||| |||  ||| | ||  |||||||||||    
T  6464949 atgcatcttgttgatataggtagtaccaaacaattcttat---aagccttccttcaaccatgtagttccatacctacacggcctcatgattcctctcatt 6465045  T
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
     | |||||||||| ||  | || ||||||| |||| ||| |||||||| || |||||||||||| ||||||||    
T  6465046 ccaatgtgattcgattactctagaagttgttgggagccgctcattatcgtgccttgtgcaccggcgaccactc 6465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 22026398 - 22026317
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| ||||| |||||||||||| ||||||||    
T  22026398 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcatgccttgtgcaccggcgaccactc 22026317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 22840657 - 22840737
Alignment:
Q  114 ctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||| ||||||||||| |||  | || ||||| |||||| ||| |||||||| |||||| |||||||| ||||||||    
T  22840657 ctctcattccgatgtgattcagttactctagaagttatcgggagccgctcattatcgtgtcttatgcaccggcgaccactc 22840737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 10844902 - 10844804
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  10844902 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 10844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 22549122 - 22549220
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  22549122 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 22549220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 27925918 - 27925820
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||| | |||||||| ||||| ||||| ||||    
T  27925918 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccagcgaccactccccgtcctcgtcagcct 27925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 28453357 - 28453260
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || |||||||| || ||| ||||||||||||||| ||| ||||| || || ||||||||||||  ||||||| ||| | ||||| ||||    
T  28453357 cctctcattccggtgtgattcagt-catctaaaagttgtcgggagccgctcattgtcgtgccttgtgcaccggcaaccactccccgccctcgtcagcct 28453260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 39640955 - 39640875
Alignment:
Q  114 ctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||  ||||||||||| ||| | |||||| |||||||| ||||||||| |||||||||||||||||  ||||||||    
T  39640955 ctctcattctgatgtgattcgattcttctaaaagctgtcgggagccgttcattgtcatgtcttgtgcaccgacgaccactc 39640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 16810944 - 16810846
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||| ||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  16810944 cctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 16810846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 16811400 - 16811319
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| |||||||||||| ||| | || ||| |||||||| ||| ||||| || || |||||||||||| ||||||||    
T  16811400 cctctcattccgatgtgattcgattcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 16811319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 39653183 - 39653085
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || |||||||| |||| | || ||| |||| ||| ||| ||||| || || |||||||||||| |||||||| ||||| ||||| ||||    
T  39653183 cctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagcct 39653085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 2911114 - 2911021
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtc 206  Q
    |||||||||  | ||||||||||||| | || ||| |||  ||| ||| | |||||| ||||||||||||||| |||||||| ||||| |||||    
T  2911114 cctctcattcaggtgtgattcggttcgtctagaagctgttaggatccgcttattatcgtgtcttgtgcaccggcgaccactccccgtcctcgtc 2911021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 32797062 - 32797142
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||| ||||||||||||||||| |  | || ||| |||||||| ||||||||| ||||  |||||||||||| ||||||||    
T  32797062 cctcttatttcgatgtgattcggcttgtctagaagctgtcgggagccgttcattgtcat-acttgtgcaccggcgaccactc 32797142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 37045054 - 37044973
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||||  ||||||||||||||| | || ||| |||||||| ||| |||||  | || |||||||||||| ||||||||    
T  37045054 cctctcattcagatgtgattcggttcctctagaagctgtcgggagccgctcattggcgtgccttgtgcaccggtgaccactc 37044973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 26957684 - 26957782
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| |||||||||||||||| | || |||||||||||| ||| ||||| || || |||||||||||  |||||||  ||| | ||||||||||    
T  26957684 cctctcattccgatgtgattcggttcctctagaagttgtcgggagccgctcattgtcgtgccttgtgcaccgacgaccacttcccgccctcgtcggcct 26957782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 9623227 - 9623155
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccgg 185  Q
    ||||||||| |  |||||||||||| || ||||||||||| || |||  ||||||||||||||||||||||||    
T  9623227 cctctcattccattgtgattcggtttatctaaaagttgtcaggtaccactcattatcatgtcttgtgcaccgg 9623155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 34405718 - 34405816
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||||| || ||||||||||||| | || ||| |||||||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  34405718 cctctcattccggtgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 34405816  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 2611779 - 2611860
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| ||||||||||| |||| | || ||| |||||||| ||| ||||| || || |||||||||||| ||||||||    
T  2611779 cctctcattccgatgtgattcagttcctctagaagctgtcgggagccgctcattgtcgtgccttgtgcaccggcgaccactc 2611860  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 35527248 - 35527345
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    |||||||||||| ||||||||||||| | || ||| ||| |||| ||| |||||  | ||||||||||||||  |||||||| ||||| ||||| ||||    
T  35527248 cctctcatttcggtgtgattcggttcgtctagaagctgttgggagccgctcatt-gcgtgtcttgtgcaccgacgaccactccccgtcctcgtcagcct 35527345  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 2189163 - 2189082
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| || ||||||||||||| | || ||| |||| ||| ||| ||||| || || |||||||||||| ||||||||    
T  2189163 cctctcattccggtgtgattcggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactc 2189082  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 6747757 - 6747806
Alignment:
Q  145 aagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||||||| ||| ||||| ||||| |||||||||||| ||||||||    
T  6747757 aagttgtcgggagccgctcattgtcatgccttgtgcaccggcgaccactc 6747806  T

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Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 2761 - 2663
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    |||||||||||||||||||||| ||| | || |||||||||||| ||  ||||| || || ||||||| |||| |||||||| ||| | ||||| ||||    
T  2761 cctctcatttcgatgtgattcgattcctctagaagttgtcgggagccactcattgtcgtgccttgtgctccggcgaccactccccgccctcgtcagcct 2663  T

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Target: scaffold0243 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 1237 - 1141
Alignment:
Q  115 tctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactcaccgtcttcgtcggcct 211  Q
    ||||||| || ||||||||||||| | || |||||||| ||| ||| ||||| || || |||||||||||| |||||||| ||| | ||||| ||||    
T  1237 tctcattccggtgtgattcggttcctctagaagttgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagcct 1141  T

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Target: scaffold0557 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 769 - 699
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcacc 183  Q
    ||||||||| |||||||||||||||| | || |||||||||||| ||| ||||| || |  ||||||||||    
T  769 cctctcattccgatgtgattcggttcctctataagttgtcgggagccgctcattgtcgtaccttgtgcacc 699  T

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Target: scaffold0442 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 2524 - 2443
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    |||||||||  ||||||||||||||| | || ||||| |||||| ||| ||||| || || |||||||||||| || |||||    
T  2524 cctctcattctgatgtgattcggttcctctataagttttcgggagccgctcattgtcgtgccttgtgcaccggcgatcactc 2443  T

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Target: scaffold0333 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 5035 - 4954
Alignment:
Q  113 cctctcatttcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||| || ||||||||||||| | || |||||||| ||| ||| | ||| || || |||||||||||| ||||||||    
T  5035 cctctcattccggtgtgattcggttcctctagaagttgtcaggagccgctaattgtcgtgccttgtgcaccggcgaccactc 4954  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 17815 - 17887
Alignment:
Q  122 tcgatgtgattcggttcatttaaaagttgtcgggaaccgttcattatcatgtcttgtgcaccggagaccactc 194  Q
    ||||||||||||||||| | || ||| |||||||| ||| ||||| || || || ||||||||| ||||||||    
T  17815 tcgatgtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgcctcgtgcaccggcgaccactc 17887  T

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