View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_52 (Length: 337)
Name: NF15745_high_52
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_52 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 36454835 - 36455139
Alignment:
| Q |
11 |
caaaggatatccaatggactggactcatagttggtgtgaccttttttgtttcttataaactaactctagtctctagtatagtatccctnnnnnnnnnnnn |
110 |
Q |
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| T |
36454835 |
caaaggatatccaatggactatactcatagttggtgtgaccttttttgtttcttataaactaactctagtctctagtatagtatccctaaaaaacaaaac |
36454934 |
T |
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| Q |
111 |
nnnnnnnnctctattgatcaaattttttcaagaagtaaaaatatagtatagtagtgtcgttaaatgacatcattaattaacttcaggttcgtcgtatctg |
210 |
Q |
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| T |
36454935 |
t-------ctctattgatcaaattttttcaagaagtaaaaatatagtatagtagtgtcgttaaatgacatcattaattaacttcaggttcgtcgtatctg |
36455027 |
T |
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| Q |
211 |
caaccaatttaagcttgcgccaaaattgtatgacaaaggaaaagaatcattttggtgctctcagtttatgattcctttttgtctccatacacatcttttt |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36455028 |
caaccaatttaagcttgcgccaaaattgtatgacaaaggaaaagaatcattttggtgctctcagtttatgattcctttttgtctccatacacatcttttt |
36455127 |
T |
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| Q |
311 |
cattaccaaact |
322 |
Q |
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|||||||||||| |
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| T |
36455128 |
cattaccaaact |
36455139 |
T |
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