View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_66 (Length: 294)
Name: NF15745_high_66
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 289
Target Start/End: Complemental strand, 42325921 - 42325650
Alignment:
| Q |
17 |
actagctagttgaaatgaacagaaccaaaccaatatcaagagtggtgggagcacctgaacctgtatttttacaccctatagaatccctcttttctataga |
116 |
Q |
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| T |
42325921 |
actagctagttgaaatgaacagaaccaaaccaatatcaagagtggtgggagcacctgaacctgtatttttacaccctatagaatccctcttttctataga |
42325822 |
T |
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| Q |
117 |
tctaattaaattatatcttgcatgtaacatatttaaaatgggaaaaataacacttaaccttgaaagatacttttaagacaatataaataagaagctcaac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42325821 |
tctaattaaattatatcttgcatgtaacatatttaaaatgggaaaaataacacttaaccttgaaagatacttttaagacaatataaataagaagctcaac |
42325722 |
T |
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| Q |
217 |
ataactccttttcctcaacaagaagagttatctgagttgtactcttaagtttccactcaactttcttttctct |
289 |
Q |
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|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42325721 |
ataactcc-tttcctcaacaagaagaattatctgagttgtactcttaagtttccactcaaatttcttttctct |
42325650 |
T |
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