View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_71 (Length: 280)
Name: NF15745_high_71
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_71 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7176437 - 7176692
Alignment:
| Q |
1 |
tttgagaacttgagggcttatcaaaaagaggaacaagaagtgttgtaaagggataaattgtagattgtgttaaagaaagtgtattagcttcaagagtggt |
100 |
Q |
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| T |
7176437 |
tttgagaacttgagggcttatcaaaaagaggaacaagaagtgttgtaaagggataaattgtagattgtgttaaagaaagtgtattagcttcaagagtggt |
7176536 |
T |
|
| Q |
101 |
tctaaagttaacaccaaatttatcactaatgaatgaaacagaatcaccccaatctaccaaataactcaaaagatactttatgtttttctgagtttgattc |
200 |
Q |
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| T |
7176537 |
tctaaagttaacaccaaatttatcactaatgaatgaaacagaatcaccccaatcaaccaaataactcaaaagatactttatgtttttctgagtttgattc |
7176636 |
T |
|
| Q |
201 |
tttgtgggacaagcacatctaagaggaacgagtagttttctaccaggatatacatc |
256 |
Q |
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| T |
7176637 |
tttgtaggacaagcacatctaagaggaacaagtagttttctaccaggatatacatc |
7176692 |
T |
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