View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_78 (Length: 257)
Name: NF15745_high_78
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_78 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 30563972 - 30564196
Alignment:
| Q |
18 |
actatgacatggagcttctttgtgtctgttccacataaatctggtccaaacattacactgtagagaatttgtcagtgtgacattcttttctgttgaaaag |
117 |
Q |
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| T |
30563972 |
actatgacatggagcttctttgtgtctgttccacataaatctggtccaaacattacactgtagagaatttgtcagtgtgacattcttttctgttgaaaag |
30564071 |
T |
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| Q |
118 |
tataaaatgtgcacaaagaagaaaaacgtgtgtttgtaaaaatgatgcaaggtgaattaaaataccatgttacagtaagggtcaagcaaaccaataaaaa |
217 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
30564072 |
tataaaatgtgcacaaagaagaaaaacgtgcgtttgtaaaaatgatgcaaggtgaattaaaataccatgttacaataagggtcaagcaaaccaataaaaa |
30564171 |
T |
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| Q |
218 |
gagaagaacaacagcatggatatgg |
242 |
Q |
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||||||||||||||||||||||||| |
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| T |
30564172 |
gagaagaacaacagcatggatatgg |
30564196 |
T |
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