View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15745_high_83 (Length: 254)
Name: NF15745_high_83
Description: NF15745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15745_high_83 |
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Alignment Details
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 2156404 - 2156534
Alignment:
| Q |
90 |
tgtaatatattgtgacaattttgtgatgaaagaagataggataagtttttaacctttttcaagatttcaagagcaattctagcctctccttgttgctaat |
189 |
Q |
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| T |
2156404 |
tgtaatatattgtgacaattttgtgatgaaagaagataggataagtttttaacctttttcaagatttcaagagcaattctagcctctccttgttgctaat |
2156503 |
T |
|
| Q |
190 |
aaggtttgaaagataacccttctctctattc |
220 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
2156504 |
aaggtttgaaagataacccttctctctattc |
2156534 |
T |
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